RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP7D3 (Homo sapiens)

Ensembl gene IDs: ENSG00000129680

Ensembl transcript IDs: ENST00000316077.14, ENST00000370660.3, ENST00000370661.5, ENST00000370663.9, ENST00000471510.1, ENST00000477124.1, ENST00000489788.5, ENST00000495432.1

Found 709 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCATGCACAGTCCGCCTCCACGCTCTGGCTCCTTGGCCATCGCTaGTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGGAG +
Preference number: 1 (lower is better)
Translates to: CHAQSASTLWLLGHR*CFMPPDPSCSGSKE
Trigger: CTCCTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTGGAGGCGGACTGTGCATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 90 bp TGGCTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTaGTCTGGCTCCAAGGAGTTAGAGGTGTTTGAGAACAGTGGAGTC +
Preference number: 1 (lower is better)
Translates to: WLLGHRCCFMPPDPS*SGSKELEVFENSGV
Trigger: GACTCCACTGTTCTCAAACACCTCTAACTCCTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 90 bp CATTCCCAGCACCAAAGACACTGCTCTGGTGTCTGTGACATACCCTaGAAGCCTCAAGACACTATGTCCACTCCCAAAGCAGTGTGGGGT +
Preference number: 1 (lower is better)
Translates to: HSQHQRHCSGVCDIP*KPQDTMSTPKAVWG
Trigger: ACCCCACACTGCTTTGGGAGTGGACATAGTGTCTTGAGGCTTGCAGGGTATGTCACAGACACCAGAGCAGTGTCTTTGGTGCTGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 90 bp TCACCTTGGCCTTGTAAACAGGAACATCCTGGTAGACAGTTTCAATaGATGGATCAACAGGACCTGGCGCCAGACTTGGCAGTGAAGAGT +
Preference number: 1 (lower is better)
Translates to: SPWPCKQEHPGRQFQ*MDQQDLAPDLAVKS
Trigger: ACTCTTCACTGCCAAGTCTGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTGTTTACAAGGCCAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 90 bp AGTTTCAATGGATGGATCAACAGGACCTGGCGCCAGACTTGGCAGTaGAGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTT +
Preference number: 1 (lower is better)
Translates to: SFNGWINRTWRQTWQ*RVSSSDETQGGMGF
Trigger: AAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCTTCACTGCCAAGTCTGGCGCCAGGTCCTGTTGATCCATCCATTGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 90 bp ATACAGTTGGGGAAATTAGAATCAGATGGGTGCCTAGGACCCATCTaGAAACACTGTAACTGGACTGGTAAGGAGACCAAAGGCAAGGAG +
Preference number: 1 (lower is better)
Translates to: IQLGKLESDGCLGPI*KHCNWTGKETKGKE
Trigger: CTCCTTGCCTTTGGTCTCCTTACCAGTCCAGTTACAGTGTTTCCAGATGGGTCCTAGGCACCCATCTGATTCTAATTTCCCCAACTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 90 bp ATACCCTGCAAGCCTCAAGACACTATGTCCACTCCCAAAGCAGTGTaGGGTGTTAGTTTGAGGGACAAACTTGGGTTTGAATATCAGCTC +
Preference number: 1 (lower is better)
Translates to: IPCKPQDTMSTPKAV*GVSLRDKLGFEYQL
Trigger: GAGCTGATATTCAAACCCAAGTTTGTCCCTCAAACTAACACCCCACACTGCTTTGGGAGTGGACATAGTGTCTTGAGGCTTGCAGGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 90 bp CGGTGTCACTTCCTTTACCAGGTTCAAGTCAGAAGCAGAAAAATTTaGGGACTGATGGGCCCAGGAGTTGAGTTATCCAGAGTGGAAGAT +
Preference number: 1 (lower is better)
Translates to: RCHFLYQVQVRSRKI*GLMGPGVELSRVED
Trigger: ATCTTCCACTCTGGATAACTCAACTCCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCTGACTTGAACCTGGTAAAGGAAGTGACACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR GCA 90 bp CACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTaGTCTGGTGTCTGTGACATACCCTGCAAGCCTCAAGACACTATG +
Preference number: 1 (lower is better)
Translates to: HTKCQQTFHSQHQRH*SGVCDIPCKPQDTM
Trigger: CATAGTGTCTTGAGGCTTGCAGGGTATGTCACAGACACCAGAGCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 90 bp ATGTACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTaGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTATC +
Preference number: 1 (lower is better)
Translates to: MYICVHFCVPITRTH*QPVARERQANFGCI
Trigger: GATACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 90 bp GAGACTGTGGGCAAGTTAACCTCTCTGAGCTTGATCCTTCACCTGTaGGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACAT +
Preference number: 1 (lower is better)
Translates to: ETVGKLTSLSLILHL*DVKFLLCRIPCGRH
Trigger: ATGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAGGTTAACTTGCCCACAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 90 bp GATAAACACCAATATGTCCTTCAAAAGGAAACACTGACAAGAGCATaGAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCA +
Preference number: 1 (lower is better)
Translates to: DKHQYVLQKETLTRA*KVLTVPRWGFTGLP
Trigger: TGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCTCTTGTCAGTGTTTCCTTTTGAAGGACATATTGGTGTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 90 bp CAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTATCTCAAGCCTaGGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAG +
Preference number: 1 (lower is better)
Translates to: QWLEKGKQILVVSQA*VYTQRQNWRVQAEK
Trigger: CTTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGATACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 90 bp GACAAACTTGGGTTTGAATATCAGCTCTGTCTCTTTCCAGCTGTGTaGCCTGGAACAAATGCTGCTCTCCACAAATTTCAGTGTCCTCAT +
Preference number: 1 (lower is better)
Translates to: DKLGFEYQLCLFPAV*PGTNAALHKFQCPH
Trigger: ATGAGGACACTGAAATTTGTGGAGAGCAGCATTTGTTCCAGGTCACACAGCTGGAAAGAGACAGAGCTGATATTCAAACCCAAGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 90 bp ACTGCAATGATTACAATACAGTTGGGGAAATTAGAATCAGATGGGTaGCTAGGACCCATCTGGAAACACTGTAACTGGACTGGTAAGGAG +
Preference number: 1 (lower is better)
Translates to: TAMITIQLGKLESDG*LGPIWKHCNWTGKE
Trigger: CTCCTTACCAGTCCAGTTACAGTGTTTCCAGATGGGTCCTAGGCACCCATCTGATTCTAATTTCCCCAACTGTATTGTAATCATTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 90 bp ACTTCCTTTACCAGGTTCAAGTCAGAAGCAGAAAAATTTGAGGACTaGTGGGCCCAGGAGTTGAGTTATCCAGAGTGGAAGATGTATTCA +
Preference number: 1 (lower is better)
Translates to: TSFTRFKSEAEKFED*WAQELSYPEWKMYS
Trigger: TGAATACATCTTCCACTCTGGATAACTCAACTCCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCTGACTTGAACCTGGTAAAGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 90 bp GATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCCTTaGTGCACTCACTCCAGCAAACACATTGGTGGGACAACACAAGAA +
Preference number: 1 (lower is better)
Translates to: DSSRNSTVTVSGKHP*CTHSSKHIGGTTQE
Trigger: TTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 90 bp CCAAAAGGAACACTGGCCTGCTTCAGACTATTTACGATTCAACACTaGAAACTCATTAGGAGAATTAATCTGCATTTGAATTTTATGGAA +
Preference number: 1 (lower is better)
Translates to: PKGTLACFRLFTIQH*KLIRRINLHLNFME
Trigger: TTCCATAAAATTCAAATGCAGATTAATTCTCCTAATGAGTTTTCAGTGTTGAATCGTAAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGAAGGCCGGCCAGGCACTaGAGGGGTGGGGTCACTGAA +
Preference number: 2 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRRPARH*RGGVTE
Trigger: TTCAGTGACCCCACCCCTCCAGTGCCTGGCCGGCCT...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CCA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGGGTAGACAGTTTCAATaGATGGATCAACAGGACCTG +
Preference number: 2 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGGRQFQ*MDQQDL
Trigger: CAGGTCCTGTTGATCCATCCATTGAAACTGTCTACC...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGACGGGTGGATCTCTTaGGGCCAGGATTTCGAGACT +
Preference number: 2 (lower is better)
Translates to: TSVCISVCPSHELTGSQWDGWIS*GQDFET
Trigger: AGTCTCGAAATCCTGGCCTCAAGAGATCCACCCGTC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACATCCGCCTCCACGCTCTaGCTCCTTGGCCATCGCTGC +
Preference number: 2 (lower is better)
Translates to: PSPVRRKISTLQNPMWETSASTL*LLGHRC
Trigger: GCAGCGATGGCCAAGGAGCCAGAGCGTGGAGGCGGA...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACATTTCGGGGCCTGTTTTaGCCAACCAGGCCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PSPVRRKISTLQNPMWETFRGLF*PTRPAR
Trigger: CCTGGCCGGCCTGGTTGGTCAAAACAGGCCCCGAAA...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGAGAAGCAGAAAAATTTaGGGACTGATGGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: TSVCISVCPSHELTGSQWRSRKI*GLMGPG
Trigger: TCCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCT...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTGACGGGTGGATCTCTTaGGGCCAGGATTTCGAGACT +
Preference number: 2 (lower is better)
Translates to: TRTHWQPVARERQANFGCDGWIS*GQDFET
Trigger: AGTCTCGAAATCCTGGCCTCAAGAGATCCACCCGTC...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGATCCAGCTGTGTGACCTaGAACAAATGCTGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRSSCVT*NKCCSP
Trigger: TGGAGAGCAGCATTTGTTCCAGGTCACACAGCTGGA...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGAGAATTGCTTGAGATaGGGAGGCGGAGGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVENCLR*GGGGCS
Trigger: ACTGCAACCTCCGCCTCCTCATCTCAAGCAATTCTC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp GGATACCAGGAAGGGAAATGCGAGGCAGCAATGCGTGAGGGGAAAGCTAGGTCAAGACACAAGGAGGAATaGGATTTCCAAATGAGGAGA +
Preference number: 2 (lower is better)
Translates to: GYQEGKCEAAMREGKARSRHKEE*DFQMRR
Trigger: TCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCT...TGACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATTTCCCTTCCTGGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGAGTGGAGTCTCAAAACTaGAAAGGCTGCAGAGATTGT +
Preference number: 2 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRVESQN*KGCRDC
Trigger: ACAATCTCTGCAGCCTTTTCAGTTTTGAGACTCCAC...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACAGTGTCCATCACCTTaGCCTTGTAAACAGGAACAT +
Preference number: 2 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRQCPSP*PCKQEH
Trigger: ATGTTCCTGTTTACAAGGCCAAGGTGATGGACACTG...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGAGCATGAAAGGTGCTaGCTGTTCCAAGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFEHERC*LFQDGA
Trigger: AGCCCCATCTTGGAACAGTCAGCACCTTTCATGCTC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCGCACAATGTCACACGTaGGCTAGCAGCCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCAQCHT*ASSPLS
Trigger: GCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGC...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR GCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTTCTTGTGAGCGATCCTaGGGCCCTTGCATAATCTAT +
Preference number: 2 (lower is better)
Translates to: TRTHWQPVARERQANFGCSCERS*GPCIIY
Trigger: ATAGATTATGCAAGGGCCGCAGGATCGCTCACAAGA...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGTTGAGTTATCCAGAGTaGAAGATGTATTCATCTCCC +
Preference number: 2 (lower is better)
Translates to: TSVCISVCPSHELTGSQWLSYPE*KMYSSP
Trigger: GGGAGATGAATACATCTTCCACTCTGGATAACTCAA...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACACACTGCATTCTTGTaGTTTTTAGGGATTGGAGCT +
Preference number: 2 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRHTAFL*FLGIGA
Trigger: AGCTCCAATCCCTAAAAACCACAAGAATGCAGTGTG...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCAGCAAACACATTGGTaGGACAACACAAGAATGAGA +
Preference number: 2 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIQQTHW*DNTRMR
Trigger: TCTCATTCTTGTGTTGTCCCACCAATGTGTTTGCTG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGCAGCAAACACATTGGTaGGACAACACAAGAATGAGA +
Preference number: 2 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMQQTHW*DNTRMR
Trigger: TCTCATTCTTGTGTTGTCCCACCAATGTGTTTGCTG...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGAAAAATTTGAGGACTaGTGGGCCCAGGAGTTGAGT +
Preference number: 2 (lower is better)
Translates to: ISSLSVYSTTELESTGRKEKFED*WAQELS
Trigger: ACTCAACTCCTGGGCCCATCAGTCCTCAAATTTTTC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCAAGTTTCCAGCTCAGATaGGACACAAGGAGGAATGGG +
Preference number: 2 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSSFQLR*DTRRNG
Trigger: CCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACT...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCCGCCAGACTTGGCAGTaGAGAGTTTCCAGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCRQTWQ*RVSSSD
Trigger: ATCTGAGCTGGAAACTCTTCACTGCCAAGTCTGGCG...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAATCTTGTGAGCGATCCTaGGGCCCTTGCATAATCTAT +
Preference number: 2 (lower is better)
Translates to: ISSLSVYSTTELESTGRKSCERS*GPCIIY
Trigger: ATAGATTATGCAAGGGCCGCAGGATCGCTCACAAGA...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR GCA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGAAGAAGAGCAACAACGTaGACAATGTCACACGTGAGC +
Preference number: 2 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRRRATT*TMSHVS
Trigger: GCTCACGTGTGACATTGTGCACGTTGTTGCTCTTCT...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR GCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATTCAAGATCACGCCACTaGATTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: LSELDPSPVRRKISTLQNSRSRH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATGCAGTGGCGTGATCTTGA...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAGACAGGAGAATTGCTTaGGATGAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRDRRIA*DEEAEV
Trigger: AACCTCCGCCTCCTCATCTCAAGCAATTCTCCTGTC...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR GCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACATTAGAATCAGATGGGTaGCTAGGACCCATCTGGAAA +
Preference number: 2 (lower is better)
Translates to: PSPVRRKISTLQNPMWETLESDG*LGPIWK
Trigger: TTTCCAGATGGGTCCTAGGCACCCATCTGATTCTAA...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CCA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGACTTCAGGGGCCTGTCTaGCATTCTTTATGGTATTTC +
Preference number: 2 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRLQGPV*HSLWYF
Trigger: GAAATACCATAAAGAATGCCAGACAGGCCCCTGAAG...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAATTCATCTCCCAGGCTaGGTAAGGTTTACATATCCA +
Preference number: 2 (lower is better)
Translates to: ISSLSVYSTTELESTGRKIHLPG*VRFTYP
Trigger: TGGATATGTAAACCTTACTCAGCCTGGGAGATGAAT...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCATGCAGTGTCCACAATaGCACAGGCGTAGAAAATGC +
Preference number: 2 (lower is better)
Translates to: GILYGISHCILVVFRDWSMQCPQ*HRRRKC
Trigger: GCATTTTCTACGCCTGTGTCATTGTGGACACTGCAT...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTGAAAAATTTGAGGACTaGTGGGCCCAGGAGTTGAGT +
Preference number: 2 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFEKFED*WAQELS
Trigger: ACTCAACTCCTGGGCCCATCAGTCCTCAAATTTTTC...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCAGAAGCAGAAAAATTTaGGGACTGATGGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: FCNQILLETPQLQFQESIRSRKI*GLMGPG
Trigger: TCCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCT...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCCGATCCTGCGGCCCTTaGATAATCTATTCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSRSCGP*IIYSVL
Trigger: GAGAACAGAATAGATTATGCAAGGGCCGCAGGATCG...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR GCA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATAATGCGAGGCAGCAATaGGTGAGGGGAAAGCTAGGT +
Preference number: 2 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDNARQQ*VRGKLG
Trigger: ACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATT...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTTGAGTTATCCAGAGTaGAAGATGTATTCATCTCCC +
Preference number: 2 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHLSYPE*KMYSSP
Trigger: GGGAGATGAATACATCTTCCACTCTGGATAACTCAA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR GCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCACCTGGAACAAATGCTaGTCTCCACAAATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCTWNKC*SPQISV
Trigger: CACTGAAATTTGTGGAGAGCAGCATTTGTTCCAGGT...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCCTCCAGCAAACACATTaGTGGGACAACACAAGAATG +
Preference number: 2 (lower is better)
Translates to: FCNQILLETPQLQFQESILQQTH*WDNTRM
Trigger: CATTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAG...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCATTCATCTCCCAGGCTaGGTAAGGTTTACATATCCA +
Preference number: 2 (lower is better)
Translates to: FCNQILLETPQLQFQESIIHLPG*VRFTYP
Trigger: TGGATATGTAAACCTTACTCAGCCTGGGAGATGAAT...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR TCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATAATGGGATTTCCAAATaGGGAGAAACAGGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: LSELDPSPVRRKISTLQNNGISK*GETGLL
Trigger: AAGCAAACCTGTTTCTCCTCATTTGGAAATCCCATT...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR TCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCGTTTACATATCCAAATaGGGAGAAACAGGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: FCNQILLETPQLQFQESIVYISK*GETGLL
Trigger: AAGCAAACCTGTTTCTCCTCATTTGGATATGTAAAC...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR GCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATTATGGTATTTCACACTaGATTCTTGTGGTTTTTAGG +
Preference number: 2 (lower is better)
Translates to: LSELDPSPVRRKISTLQNYGISH*ILVVFR
Trigger: CCTAAAAACCACAAGAATGCAGTGTGAAATACCATA...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAACTCACTGGCACAGATaGGTAGAGTTAAAAATATAC +
Preference number: 2 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRTHWHR*VELKIY
Trigger: GTATATTTTTAACTCTACCCATCTGTGCCAGTGAGT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCAGCCAAAAGGAACACTaGCCTGCTTCAGACTATTTA +
Preference number: 2 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGSQKEH*PASDYL
Trigger: TAAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCT...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR GCA 72 bp CAGTCCGCCTCCACGCTCTGGCTCCTTGGCCATCGCTaGTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGC +
Preference number: 3 (lower is better)
Translates to: QSASTLWLLGHR*CFMPPDPSCSG
Trigger: GCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTGGAGGCGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCGACCTGGCGCCAGACTaGGCAGTGAAGAGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSDLAPD*AVKSFQ
Trigger: CTGGAAACTCTTCACTGCCAAGTCTGGCGCCAGGTC...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 72 bp CCACGCTCTGGCTCCTTGGCCATCGCTGCTGTTTTATaGCTCCTGATCCCTCTTGCTCTGGCTCCAAGGAGT +
Preference number: 3 (lower is better)
Translates to: PRSGSLAIAAVL*LLIPLALAPRS
Trigger: ACTCCTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCGCACAGCCCCCTCATTaGACAGACAAGGAACAGGGA +
Preference number: 3 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSAQPPH*TDKEQG
Trigger: TCCCTGTTCCTTGTCTGTCAAATGAGGGGGCTGTGC...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGGTTTCGGGGCCTGTTTaGACCAACCAGGCCGGCCAG +
Preference number: 3 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWVSGPV*TNQAGQ
Trigger: CTGGCCGGCCTGGTTGGTCAAAACAGGCCCCGAAAC...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 72 bp CTGGCTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTaGTCCCTCTTGCTCTGGCTCCAAGGAGTTAGAGGT +
Preference number: 3 (lower is better)
Translates to: LAPWPSLLFYAS*SLLLWLQGVRG
Trigger: ACCTCTAACTCCTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGAGACGGGTGGATCTCTaGAGGCCAGGATTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: TSVCISVCPSHELTGSQWRRVDL*RPGFRD
Trigger: GTCTCGAAATCCTGGCCTCAAGAGATCCACCCGTCT...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACCACGCTCTGGCTCCTaGGCCATCGCTGCTGTTTTA +
Preference number: 3 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRPRSGS*AIAAVL
Trigger: TAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTGG...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 72 bp GGATGGATCAACAGGACCTGGCGCCAGACTTGGCAGTaGAGAGTTTCCAGCTCAGATGAGACACAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: GWINRTWRQTWQ*RVSSSDETQGG
Trigger: TCCTCCTTGTGTCTCATCTGAGCTGGAAACTCTTCACTGCCAAGTCTGGCGCCAGGTCCTGTTGATCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 72 bp ATCAGAGAAGAGCAACAACGTGCACAATGTCACACGTaGGCTAGCAGCCCTCTCAGCTGGGTTCAGGTCTTC +
Preference number: 3 (lower is better)
Translates to: IREEQQRAQCHT*ASSPLSWVQVF
Trigger: GAAGACCTGAACCCAGCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGCACGTTGTTGCTCTTCTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 72 bp GGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTaGTCTGGCTCCAAGGAGTTAGAGGTGTTTGAGAAC +
Preference number: 3 (lower is better)
Translates to: GHRCCFMPPDPS*SGSKELEVFEN
Trigger: GTTCTCAAACACCTCTAACTCCTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 72 bp ATGATAAAATGTCATGCACAGTCCGCCTCCACGCTCTaGCTCCTTGGCCATCGCTGCTGTTTTATGCCTCCT +
Preference number: 3 (lower is better)
Translates to: MIKCHAQSASTL*LLGHRCCFMPP
Trigger: AGGAGGCATAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTGGAGGCGGACTGTGCATGACATTTTATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 72 bp CACCAAAGACACTGCTCTGGTGTCTGTGACATACCCTaGAAGCCTCAAGACACTATGTCCACTCCCAAAGCA +
Preference number: 3 (lower is better)
Translates to: HQRHCSGVCDIP*KPQDTMSTPKA
Trigger: TGCTTTGGGAGTGGACATAGTGTCTTGAGGCTTGCAGGGTATGTCACAGACACCAGAGCAGTGTCTTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGCGATCCTGCGGCCCTaGCATAATCTATTCTGTTCT +
Preference number: 3 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIAILRP*HNLFCS
Trigger: AGAACAGAATAGATTATGCAAGGGCCGCAGGATCGC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp GGCATAAATGAATACCCACACCTCATAGAGTTGTTGTaGGCATTGAAAATGCCTGGCTGGGCACGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: GINEYPHLIELL*ALKMPGWARWL
Trigger: GAGCCACCGTGCCCAGCCAGGCATTTTCAATGCTCACAACAACTCTATGAGGTGTGGGTATTCATTTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 72 bp CCTTGTAAACAGGAACATCCTGGTAGACAGTTTCAATaGATGGATCAACAGGACCTGGCGCCAGACTTGGCA +
Preference number: 3 (lower is better)
Translates to: PCKQEHPGRQFQ*MDQQDLAPDLA
Trigger: TGCCAAGTCTGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTGTTTACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 72 bp CCCTCTCAGCTGGGTTCAGGTCTTCAGGGGCCTGTCTaGCATTCTTTATGGTATTTCACACTGCATTCTTGT +
Preference number: 3 (lower is better)
Translates to: PSQLGSGLQGPV*HSLWYFTLHSC
Trigger: ACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTGAAGACCTGAACCCAGCTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 72 bp TTAATGGGATCAGAATATCAAGAACCTCTCTGCTTGTaGTTAACAGGGTGGGCTCTGGCACCAGGCTACCAG +
Preference number: 3 (lower is better)
Translates to: LMGSEYQEPLCL*LTGWALAPGYQ
Trigger: CTGGTAGCCTGGTGCCAGAGCCCACCCTGTTAACCACAAGCAGAGAGGTTCTTGATATTCTGATCCCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCAGAAGCAGAAAAATTaGAGGACTGATGGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVQKQKN*RTDGPR
Trigger: CCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCTG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGCTGAGACAGGAGAATaGCTTGAGATGAGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFAETGE*LEMRRR
Trigger: CCGCCTCCTCATCTCAAGCAATTCTCCTGTCTCAGC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGCGATCCTGCGGCCCTaGCATAATCTATTCTGTTCT +
Preference number: 3 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVAILRP*HNLFCS
Trigger: AGAACAGAATAGATTATGCAAGGGCCGCAGGATCGC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGCAAGCAAATTTTGGTaGTATCTCAAGCCTGAGTGT +
Preference number: 3 (lower is better)
Translates to: TSVCISVCPSHELTGSQWASKFW*YLKPEC
Trigger: ACACTCAGGCTTGAGATACAACCAAAATTTGCTTGC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp TCCCTCTTGCTCTGGCTCCAAGGAGTTAGAGGTGTTTaGGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: SLLLWLQGVRGV*EQWSLKTEKAA
Trigger: TGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTCCTTGGAGCCAGAGCAAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 72 bp TGCCAACAAACATTTCATTCCCAGCACCAAAGACACTaGTCTGGTGTCTGTGACATACCCTGCAAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: CQQTFHSQHQRH*SGVCDIPCKPQ
Trigger: TTGAGGCTTGCAGGGTATGTCACAGACACCAGAGCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 72 bp TGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTaGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTT +
Preference number: 3 (lower is better)
Translates to: CVHFCVPITRTH*QPVARERQANF
Trigger: AAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp CTATGTCCACTCCCAAAGCAGTGTGGGGTGTTAGTTTaGGGGACAAACTTGGGTTTGAATATCAGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: LCPLPKQCGVLV*GTNLGLNISSV
Trigger: GACAGAGCTGATATTCAAACCCAAGTTTGTCCCTCAAACTAACACCCCACACTGCTTTGGGAGTGGACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CCA 72 bp GGGAAATTAGAATCAGATGGGTGCCTAGGACCCATCTaGAAACACTGTAACTGGACTGGTAAGGAGACCAAA +
Preference number: 3 (lower is better)
Translates to: GKLESDGCLGPI*KHCNWTGKETK
Trigger: TTTGGTCTCCTTACCAGTCCAGTTACAGTGTTTCCAGATGGGTCCTAGGCACCCATCTGATTCTAATTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAATTCAGGAAAGCATCCTaGATGCACTCACTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: ISSLSVYSTTELESTGRKFRKAS*MHSLQQ
Trigger: TTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAA...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAGCTGAGACAGGAGAATaGCTTGAGATGAGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRAETGE*LEMRRR
Trigger: CCGCCTCCTCATCTCAAGCAATTCTCCTGTCTCAGC...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAAGACGGGTGGATCTCTaGAGGCCAGGATTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRRRVDL*RPGFRD
Trigger: GTCTCGAAATCCTGGCCTCAAGAGATCCACCCGTCT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp GGGTTTGAATATCAGCTCTGTCTCTTTCCAGCTGTGTaGCCTGGAACAAATGCTGCTCTCCACAAATTTCAG +
Preference number: 3 (lower is better)
Translates to: GFEYQLCLFPAV*PGTNAALHKFQ
Trigger: CTGAAATTTGTGGAGAGCAGCATTTGTTCCAGGTCACACAGCTGGAAAGAGACAGAGCTGATATTCAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR GCA 72 bp CAATCTGACAGCTCTTGTGAGCGATCCTGCGGCCCTTaGATAATCTATTCTGTTCTCTACAAGATCAACTGT +
Preference number: 3 (lower is better)
Translates to: QSDSSCERSCGP*IIYSVLYKINC
Trigger: ACAGTTGATCTTGTAGAGAACAGAATAGATTATGCAAGGGCCGCAGGATCGCTCACAAGAGCTGTCAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp AAGCAGAAAAATTTGAGGACTGATGGGCCCAGGAGTTaGGTTATCCAGAGTGGAAGATGTATTCATCTCCCA +
Preference number: 3 (lower is better)
Translates to: KQKNLRTDGPRS*VIQSGRCIHLP
Trigger: TGGGAGATGAATACATCTTCCACTCTGGATAACTCAACTCCTGGGCCCATCAGTCCTCAAATTTTTCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCCAGAAGCAGAAAAATTaGAGGACTGATGGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSQKQKN*RTDGPR
Trigger: CCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCTG...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp CAATATGTCCTTCAAAAGGAAACACTGACAAGAGCATaGAAGGTGCTGACTGTTCCAAGATGGGGCTTTACA +
Preference number: 3 (lower is better)
Translates to: QYVLQKETLTRA*KVLTVPRWGFT
Trigger: TGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCTCTTGTCAGTGTTTCCTTTTGAAGGACATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp GAGAAAGGCAAGCAAATTTTGGTTGTATCTCAAGCCTaGGTGTATACTCAACGACAGAACTGGAGAGTACAG +
Preference number: 3 (lower is better)
Translates to: EKGKQILVVSQA*VYTQRQNWRVQ
Trigger: CTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGATACAACCAAAATTTGCTTGCCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR TCA 72 bp GGCAAGTTAACCTCTCTGAGCTTGATCCTTCACCTGTaGGACGTAAAATTTCTACTTTGCAGAATCCCATGT +
Preference number: 3 (lower is better)
Translates to: GKLTSLSLILHL*DVKFLLCRIPC
Trigger: ACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAGGTTAACTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCACTCCAGCAAACACATaGGTGGGACAACACAAGAAT +
Preference number: 3 (lower is better)
Translates to: FCNQILLETPQLQFQESITPANT*VGQHKN
Trigger: ATTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAGT...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAACTCCAGCAAACACATaGGTGGGACAACACAAGAAT +
Preference number: 3 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRTPANT*VGQHKN
Trigger: ATTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAGT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
3UTR-3UTR CAA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCATTTCACACTGCATTCTaGTGGTTTTTAGGGATTGGA +
Preference number: 3 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSFHTAF*WFLGIG
Trigger: TCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAA...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR-3UTR CAA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCGAAAATGACAGGGAATaGCCCCCTGACATGATAAAA +
Preference number: 3 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCENDRE*PPDMIK
Trigger: TTTTATCATGTCAGGGGGCAATTCCCTGTCATTTTC...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR TCA 72 bp TTGCATAATCTATTCTGTTCTCTACAAGATCAACTGTaGGTTTTTAGCTGTCAAAATTGTCACTGGTACACA +
Preference number: 3 (lower is better)
Translates to: LHNLFCSLQDQL*VFSCQNCHWYT
Trigger: TGTGTACCAGTGACAATTTTGACAGCTAAAAACTCACAGTTGATCTTGTAGAGAACAGAATAGATTATGCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGGCTCCCCTCTGGGGCTaGTTCCACGCTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGAPLWG*FHAHLW
Trigger: CCAGAGGTGAGCGTGGAAGCAGCCCCAGAGGGGAGC...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGTCCGCCTCCACGCTCTaGCTCCTTGGCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKSASTL*LLGHRC
Trigger: GCAGCGATGGCCAAGGAGCCAGAGCGTGGAGGCGGA...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCGCTCGCCTCCGGGGATaGTACTATGCTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSARLRG*YYAHLG
Trigger: CCCAAGGTGAGCATAGTAGCATCCCCGGAGGCGAGC...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGACTCACTTCCGGGGGTaGTTCCAGGCTCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGTHFRG*FQARLR
Trigger: CCGGAGGCGAGCCTGGAAGCACCCCCGGAAGTGAGT...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGAGGCCGGCCAGGCACTaGAGGGGTGGGGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWRPARH*RGGVTE
Trigger: TTCAGTGACCCCACCCCTCCAGTGCCTGGCCGGCCT...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGCCGCCAGCGCCAGCTaGGGCGCCGTCCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKAASAS*GAVRHH
Trigger: ATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316077.14
CDS-3UTR GCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTGCCGCCAGCGCCAGCTaGGGCGCCGTCCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFAASAS*GAVRHH
Trigger: ATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGC...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGCTCGCCTCCGGGGATaGTACTATGCTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWARLRG*YYAHLG
Trigger: CCCAAGGTGAGCATAGTAGCATCCCCGGAGGCGAGC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAGCTCACCTCTGGCAGTaGTTCCAGACTCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPAHLWQ*FQTHFR
Trigger: CCGGAAGTGAGTCTGGAAGCACTGCCAGAGGTGAGC...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTTCTGCGCTCCCCTTaGGAGGTGCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRLLRSP*EVLPGS
Trigger: GGAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAG...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CAA 72 bp AATGTCATGCACAGTCCGCCTCCACGCTCTGGCTCCTaGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: NVMHSPPPRSGS*AIAAVLCLLIP
Trigger: AGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTGGAGGCGGACTGTGCATGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATGCGAGGCAGCAAAGTTGTTGTGAGCATTaGAAATGCCTGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGLSLRVEDTRKGNARQQSCCEH*KCLAGH
Trigger: GTGCCCAGCCAGGCATTTTCAATGCTCACAACAACT...TTGCTGCCTCGCATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGCTGCTCTGGTGTCTGTaGCATACCCTGCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKLLWCL*HTLQAS
Trigger: TGAGGCTTGCAGGGTATGTCACAGACACCAGAGCAG...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGCAATCTCGTTTGCTaGAGCAACCATCCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPSNLVC*SNHPCP
Trigger: CGGGCACGGATGGTTGCTGCAGCAAACGAGATTGCT...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAGCTCAACTCGGGGGATaGGTCCATGCTCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPAQLGG*VHAHLR
Trigger: TCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGC...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATCTCCTTGGCCATCGCTaGTGTTTTATGCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LVEARGLSLRVEDTRKGNLLGHR*CFMPPD
Trigger: ATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG...ATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGCTCTGGAATTCCCACTaGAGCACTGCTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWLWNSH*STAPPP
Trigger: TGGTGGGGGAGCAGTGCTGCAGTGGGAATTCCAGAG...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR CCA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGCTTCAGGGGCCTGTCTaGCATTCTTTATGGTATTTC +
Preference number: 4 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGLQGPV*HSLWYF
Trigger: GAAATACCATAAAGAATGCCAGACAGGCCCCTGAAG...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATTCCAGCTGTGTGACCTaGAACAAATGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVEARGLSLRVEDTRKGNSSCVT*NKCCSP
Trigger: TGGAGAGCAGCATTTGTTCCAGGTCACACAGCTGGA...ATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp GGATACCAGGAAGGGAAATGCGAGGCAGCAATGCGTGAGGGGAAAGCTAGGTCATTGTGGTTAACAGGGTaGGCTCTGGCACCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GYQEGKCEAAMREGKARSLWLTG*ALAPGY
Trigger: GTAGCCTGGTGCCAGAGCCCACCCTGTTAACCACAA...TGACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATTTCCCTTCCTGGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGCTCACCACAGGGAATaGGTCCGTGCTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIAHHRE*VRAHLR
Trigger: CCTGAGGTGAGCACGGACTCATTCCCTGTGGTGAGC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAGCTTCCTGGTCTTCCTaGTCCAGCCATCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPASWSS*SSHPFF
Trigger: GAAGAAAGGATGGCTGGATCAGGAAGACCAGGAAGC...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAACTCTCAAGGATGGGCTaGCGCCAGCGCCAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKLSRMG*RQRQLR
Trigger: CCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAG...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316077.14
CDS-3UTR GCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGCTCAACTCGGGGGATaGGTCCATGCTCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWAQLGG*VHAHLR
Trigger: TCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGACTCACTTCCGGGGGTaGTTCCAGGCTCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RVSSSDETQGGMGFPNEETHFRG*FQARLR
Trigger: CCGGAGGCGAGCCTGGAAGCACCCCCGGAAGTGAGT...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCTTGGGGGCTACTTCTaGGCTCCCCTTGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVLGGYF*APLGRC
Trigger: GCACCTCCCAAGGGGAGCGCAGAAGTAGCCCCCAAG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGCATCGCCTCAGGAGATaGCTCCATGCTCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWHRLRR*LHALLG
Trigger: CCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATG...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCGGGACCGGAGGCGGTaGTGGCTCTCCGCATACATT +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVRDRRR*WLSAYI
Trigger: AATGTATGCGGAGAGCCACCACCGCCTCCGGTCCCG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316077.14
CDS-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTGCCCACACCTGCCTTaGGGGACGCTTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSICPHLP*GTLPCL
Trigger: CAAGCATGGAAGCGTCCCCCAAGGCAGGTGTGGGCA...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTTTCCAGGCTCCCCTCTaGGGCTGCTTCCACGCTCAC +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCFQAPL*GCFHAH
Trigger: GTGAGCGTGGAAGCAGCCCCAGAGGGGAGCCTGGAA...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCTTCTGCGCTCCCCTTaGGAGGTGCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCLLRSP*EVLPGS
Trigger: GGAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AACAACGTGCACAATGTCACACGTGAGCTAGCAGCCCTCTCAGCTGGGTTCAGGCCTCCATGCTCTCCTTaGGTGACCCTTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: NNVHNVTRELAALSAGFRPPCSP*VTLSHS
Trigger: AGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGG...CCTGAACCCAGCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGCACGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGCAGAGGATCTGCTGGTaGTGTTGGTTTCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKQRICW*CWFHPP
Trigger: AGGCGGATGAAACCAACACCACCAGCAGATCCTCTG...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCCCAGGGTTCAAATCCTaGCTGCTCTGCCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSPGFKS*LLCHFV
Trigger: TACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGG...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGCAGCAACTCGGGGGCTaGTCATGTCTCACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWQQLGG*SCLTWL
Trigger: CAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTG...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR TCA 90 bp AGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATGCGAGGCAGCAATTGTCTAAAGGTGTCTaGGGACTTTGGCAAGATGTC +
Preference number: 4 (lower is better)
Translates to: RGLSLRVEDTRKGNARQQLSKGV*GLWQDV
Trigger: GACATCTTGCCAAAGTCCTCAGACACCTTTAGACAA...TTGCTGCCTCGCATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCACTCTCAAGGATGGGCTaGCGCCAGCGCCAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSLSRMG*RQRQLR
Trigger: CCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAG...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGGGTGCATCCACACTTaGCTTGGGAGGTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGGCIHT*LGRCLY
Trigger: GTAGAGACACCTCCCAAGGCAAGTGTGGATGCACCC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGGGCCATGCCCACACCTaGCTTGGGGGACGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RVSSSDETQGGMGFPNEEGHAHT*LGGRFH
Trigger: ATGGAAGCGTCCCCCAAGGCAGGTGTGGGCATGGCC...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCAGGGAATGAGTCCGTaGTCACCTCAGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCQGMSP*SPQGPC
Trigger: GCATGGCCCCTGAGGTGAGCACGGACTCATTCCCTG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGTCCACCTTCGGGAGTaGTTCTATGCTCAACTCGGG +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGVHLRE*FYAQLG
Trigger: CCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGAC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGCTCGCCTCCGGGGATaGTACTATGCTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVARLRG*YYAHLG
Trigger: CCCAAGGTGAGCATAGTAGCATCCCCGGAGGCGAGC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATACTCACTTCCGGGGGTaGTTCCAGGCTCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHTHFRG*FQARLR
Trigger: CCGGAGGCGAGCCTGGAAGCACCCCCGGAAGTGAGT...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGCTCCCCTCTGGGGCTaGTTCCACGCTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHAPLWG*FHAHLW
Trigger: CCAGAGGTGAGCGTGGAAGCAGCCCCAGAGGGGAGC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCATCGCCTCAGGAGATaGCTCCATGCTCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIHRLRR*LHALLG
Trigger: CCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGTTAATGACCCTTTGCTaGATTTCTTCCCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGLMTLC*ISSRCL
Trigger: AAGACAACGGGAAGAAATGCAGCAAAGGGTCATTAA...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCCATGATAAAATGTCATaGACAGTCCGCCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSHDKMS*TVRLHA
Trigger: AGCGTGGAGGCGGACTGTGCATGACATTTTATCATG...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTCAGCTCTCTCAAGGATaGGCTGCCGCCAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFQLSQG*AAASAS
Trigger: GCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTG...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTTGCCCACACCTGCCTTaGGGGACGCTTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCCPHLP*GTLPCL
Trigger: CAAGCATGGAAGCGTCCCCCAAGGCAGGTGTGGGCA...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCTTTCACACTCTCCTTaGGGGCTACTTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGLSHSP*GLLLRS
Trigger: GGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGTGCAGAGGATCTGCTaGTGGTGTTGGTTTCATCCG +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWVQRIC*WCWFHP
Trigger: CGGATGAAACCAACACCACCAGCAGATCCTCTGCAC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCTGCCTAGGACCCATCTaGAAACACTGTAACTGGACT +
Preference number: 4 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSCLGPI*KHCNWT
Trigger: AGTCCAGTTACAGTGTTTCCAGATGGGTCCTAGGCA...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGCTTTGCCATGTCTTTTaGTTTCTTAATGACCCTTTG +
Preference number: 4 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGLCHVF*FLNDPL
Trigger: CAAAGGGTCATTAAGAAATCAAAAGACATGGCAAAG...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACGCCAGACTTGGCAGTaGAGAGTTTCCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRRQTWQ*RVSSSD
Trigger: ATCTGAGCTGGAAACTCTTCACTGCCAAGTCTGGCG...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATGCGAGGCAGCAAGGACAAACTTGGGTTTaGATATCAGCTCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RGLSLRVEDTRKGNARQQGQTWV*ISALSL
Trigger: AAGAGACAGAGCTGATATTCAAACCCAAGTTTGTCC...TTGCTGCCTCGCATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGTGCATCCACACTTaGCTTGGGAGGTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMGCIHT*LGRCLY
Trigger: GTAGAGACACCTCCCAAGGCAAGTGTGGATGCACCC...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AACAACGTGCACAATGTCACACGTGAGCTAGCAGCCCTCTCAGCTGGGTTCAGGTGGGGGACGCTTCCATaGTTGTGTTGCAGAATACTT +
Preference number: 4 (lower is better)
Translates to: NNVHNVTRELAALSAGFRWGTLP*LCCRIL
Trigger: AAGTATTCTGCAACACAAGCATGGAAGCGTCCCCCA...CCTGAACCCAGCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGCACGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGCAGGGAATGAGTCCGTaGTCACCTCAGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: RVSSSDETQGGMGFPNEEQGMSP*SPQGPC
Trigger: GCATGGCCCCTGAGGTGAGCACGGACTCATTCCCTG...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTCGGGAGTGCTTCTATaGTCAACTCGGGGGATGCGT +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMSGVLL*STRGMR
Trigger: ACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCAGGAGATGCCTCCATaGTCTCCTTGGGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIQEMPP*SPWVTL
Trigger: AAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCATCGCCTCAGGAGATaGCTCCATGCTCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCHRLRR*LHALLG
Trigger: CCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATGCGAGGCAGCAACAGTTCTTTTGGATTTaGCTGTTAGTGCTGATGGGA +
Preference number: 4 (lower is better)
Translates to: RGLSLRVEDTRKGNARQQQFFWI*LLVLMG
Trigger: TCCCATCAGCACTAACAGGCAAATCCAAAAGAACTG...TTGCTGCCTCGCATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AACAACGTGCACAATGTCACACGTGAGCTAGCAGCCCTCTCAGCTGGGTTCAGGTGCTTGGCCTCCAACTaGTTCCTTTGCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: NNVHNVTRELAALSAGFRCLASN*FLCHVF
Trigger: AAAGACATGGCAAAGGAAGCAGTTGGAGGCCAAGCA...CCTGAACCCAGCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGCACGTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGCCCTTTCTGCAGTGGTaGTTCCTGGTCTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWPFLQW*FLVFLI
Trigger: GATCAGGAAGACCAGGAAGCACCACTGCAGAAAGGG...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGATCGCTGCTGTTTTATaGCTCCTGATCCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKIAAVL*LLIPLA
Trigger: AGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGAT...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCTTAGAATCAGATGGGTaGCTAGGACCCATCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSLESDG*LGPIWK
Trigger: TTTCCAGATGGGTCCTAGGCACCCATCTGATTCTAA...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGTGCCCACACCTGCCTTaGGGGACGCTTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: RVSSSDETQGGMGFPNEECPHLP*GTLPCL
Trigger: CAAGCATGGAAGCGTCCCCCAAGGCAGGTGTGGGCA...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCCTCCATGCTCTCCTTaGGTGACCCTTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGPPCSP*VTLSHS
Trigger: AGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAGGAGGGCAGTTCTTTTaGATTTGCCTGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPGGQFF*ICLLVL
Trigger: CAGCACTAACAGGCAAATCCAAAAGAACTGCCCTCC...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATCACACTGCATTCTTGTaGTTTTTAGGGATTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LVEARGLSLRVEDTRKGNHTAFL*FLGIGA
Trigger: AGCTCCAATCCCTAAAAACCACAAGAATGCAGTGTG...ATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp CTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATTACGCAAGGGTACAGTaGCATACTGCATTACATAAT +
Preference number: 4 (lower is better)
Translates to: LVEARGLSLRVEDTRKGNYARVQ*HTALHN
Trigger: ATTATGTAATGCAGTATGTCACTGTACCCTTGCGTA...ATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGCTTCCTGGTCTTCCTaGTCCAGCCATCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIASWSS*SSHPFF
Trigger: GAAGAAAGGATGGCTGGATCAGGAAGACCAGGAAGC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGAGCATGAAAGGTGCTaGCTGTTCCAAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIEHERC*LFQDGA
Trigger: AGCCCCATCTTGGAACAGTCAGCACCTTTCATGCTC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CAGGAACATCCTGGTAGACAGTTTCAATGGATGGATCAACAGGACCTGGCGCCACTCTTTCCAGCTGTGTaGCCTGGAACAAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: QEHPGRQFQWMDQQDLAPLFPAV*PGTNAA
Trigger: AGCAGCATTTGTTCCAGGTCACACAGCTGGAAAGAG...TGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTTCCCCCACCAACAACTaGCACTTCAGTACCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCSPTNN*HFSTPP
Trigger: AGGAGGGGTACTGAAGTGTCAGTTGTTGGTGGGGGA...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR GCA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGCTTAGCAATCTCGTTTaGTGCAGCAACCATCCGTGC +
Preference number: 4 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWLSNLV*CSNHPC
Trigger: GCACGGATGGTTGCTGCAGCAAACGAGATTGCTAAG...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CAGGAACATCCTGGTAGACAGTTTCAATGGATGGATCAACAGGACCTGGCGCCACGGGGGATGCGTCCATaGTCATCTCAGAATCATATG +
Preference number: 4 (lower is better)
Translates to: QEHPGRQFQWMDQQDLAPRGMRP*SSQNHM
Trigger: CATATGATTCTGAGATGAGCATGGACGCATCCCCCG...TGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTGCTCAACTCGGGGGATaGGTCCATGCTCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCAQLGG*VHAHLR
Trigger: TCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGC...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGTCCACCTTCGGGAGTaGTTCTATGCTCAACTCGGG +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVVHLRE*FYAQLG
Trigger: CCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGAC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCCGGGGATGCTACTATaGTCACCTTGGGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGPGMLL*SPWELF
Trigger: AAACAGTTCCCAAGGTGAGCATAGTAGCATCCCCGG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCGCTCCCCTTGGGAGGTaGTTCCAGGCTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GILYGISHCILVVFRDWSAPLGR*FQAPLW
Trigger: CCAGAGGGGAGCCTGGAAGCACCTCCCAAGGGGAGC...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGCAGGAGATGCCTCCATaGTCTCCTTGGGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRQEMPP*SPWVTL
Trigger: AAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTG...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGAGCGTCTCTCGCTTTTaGCTTGGGAGATGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGSVSRF*LGRCFH
Trigger: ATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCT...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGTTTCAAGTGGTCTTCTaGTTGGCCTCCAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWFQVVF*LASNCF
Trigger: GAAGCAGTTGGAGGCCAAGCAGAAGACCACTTGAAA...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGTTGGCGTCCCCTTTCTaGAGTGGTGCTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRLASPF*SGASWS
Trigger: AGACCAGGAAGCACCACTGCAGAAAGGGGACGCCAA...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCTTAGCAATCTCGTTTaGTGCAGCAACTCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSILSNLV*CSNSGA
Trigger: AGCCCCCGAGTTGCTGCAGCAAACGAGATTGCTAAG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGTCCCCTTTCTGCAGTaGTGCTTCCTGGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVVPFLQ*CFLVFL
Trigger: CAGGAAGACCAGGAAGCACCACTGCAGAAAGGGGAC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCAGAGGATCTGCTGGTaGTGTTGGTTTCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIQRICW*CWFHPP
Trigger: AGGCGGATGAAACCAACACCACCAGCAGATCCTCTG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGTTTGGCAAGATGTCATaGAATCCTTCAGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGFGKMS*NPSDFV
Trigger: AACAAAATCTGAAGGATTCCATGACATCTTGCCAAA...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCAGCCTTCTCAGCTCTaGAATTCCCACTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIQPSQL*NSHCST
Trigger: AGTGCTGCAGTGGGAATTCCAGAGCTGAGAAGGCTG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR TCA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGGTTGCTGCCCATCTTTaGGTTTCAAGTGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWVAAHL*VSSGLL
Trigger: CAGAAGACCACTTGAAACTCAAAGATGGGCAGCAAC...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGAAAAATTTGAGGACTaGTGGGCCCAGGAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGEKFED*WAQELS
Trigger: ACTCAACTCCTGGGCCCATCAGTCCTCAAATTTTTC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGACAGGAGAATTGCTTaGGATGAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVDRRIA*DEEAEV
Trigger: AACCTCCGCCTCCTCATCTCAAGCAATTCTCCTGTC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTGCACAATGTCACACGTaGGCTAGCAGCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFAQCHT*ASSPLS
Trigger: GCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGC...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATTTTCGGGGCCTGTTTTaGCCAACCAGGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNFRGLF*PTRPAR
Trigger: CCTGGCCGGCCTGGTTGGTCAAAACAGGCCCCGAAA...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCATGTCTCACTTGGTTaGTGGCAGCCTTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVHVSLG*WQPSQL
Trigger: GAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR GCA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGCGATTAACCACATCTTaGTTCCTCCTTTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKRLTTS*FLLSLA
Trigger: TGCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCG...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGGTCCACCTTCGGGAGTaGTTCTATGCTCAACTCGGG +
Preference number: 4 (lower is better)
Translates to: RVSSSDETQGGMGFPNEEVHLRE*FYAQLG
Trigger: CCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGAC...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGCTCACCTCTGGCAGTaGTTCCAGACTCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFAHLWQ*FQTHFR
Trigger: CCGGAAGTGAGTCTGGAAGCACTGCCAGAGGTGAGC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCGCTCCCCTCTGGGGCTaGTTCCACGCTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSAPLWG*FHAHLW
Trigger: CCAGAGGTGAGCGTGGAAGCAGCCCCAGAGGGGAGC...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCGCTCCCCTTGGGAGGTaGTTCCAGGCTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSAPLGR*FQAPLW
Trigger: CCAGAGGGGAGCCTGGAAGCACCTCCCAAGGGGAGC...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCTTGGGGGCTACTTCTaGGCTCCCCTTGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNLGGYF*APLGRC
Trigger: GCACCTCCCAAGGGGAGCGCAGAAGTAGCCCCCAAG...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGTTTTGCCTTGGGAGATaGTTCCATGCTTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWFCLGR*FHACFK
Trigger: CTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAA...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCCCTTTCTGCAGTGGTaGTTCCTGGTCTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCPFLQW*FLVFLI
Trigger: GATCAGGAAGACCAGGAAGCACCACTGCAGAAAGGG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCCCTTTCTGCAGTGGTaGTTCCTGGTCTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVPFLQW*FLVFLI
Trigger: GATCAGGAAGACCAGGAAGCACCACTGCAGAAAGGG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATAAGTACCTTGCATATTaGACATGTAAACCTAACTGC +
Preference number: 4 (lower is better)
Translates to: LVEARGLSLRVEDTRKGNKYLAY*TCKPNC
Trigger: GCAGTTAGGTTTACATGTGCAATATGCAAGGTACTT...ATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGTCAAGATCACGCCACTaGATTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRSRSRH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATGCAGTGGCGTGATCTTGA...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGAGTCTGTGACATACCCTaGAAGCCTCAAGACACTATG +
Preference number: 4 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRVCDIP*KPQDTM
Trigger: CATAGTGTCTTGAGGCTTGCAGGGTATGTCACAGAC...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTCAGCTCTCTCAAGGATaGGCTGCCGCCAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFQLSQG*AAASAS
Trigger: GCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTG...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316077.14
CDS-3UTR CCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTGACGCCTGTAACACGTaGCTTCCTTTCGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCDACNT*LPFGLF
Trigger: GAACAAGCCGAAAGGAAGCCACGTGTTACAGGCGTC...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACATCCACACTTGCCTTaGGAGGTGTCTCTACTTTCT +
Preference number: 4 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRHPHLP*EVSLLS
Trigger: AGAAAGTAGAGACACCTCCCAAGGCAAGTGTGGATG...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTACTATGCTCACCTTaGGAACTGTTTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRLLCSP*ELFPGP
Trigger: TGGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAG...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATTTCCAGGCTCCCCTCTaGGGCTGCTTCCACGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNFQAPL*GCFHAH
Trigger: GTGAGCGTGGAAGCAGCCCCAGAGGGGAGCCTGGAA...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGGCTCTTTACGGACCTaGCTGGTACCATCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIGSLRT*LVPSSR
Trigger: TCTAGAAGATGGTACCAGCCAGGTCCGTAAAGAGCC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCAGAGGATCTGCTGGTaGTGTTGGTTTCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVQRICW*CWFHPP
Trigger: AGGCGGATGAAACCAACACCACCAGCAGATCCTCTG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCGCTCACCACAGGGAATaGGTCCGTGCTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GILYGISHCILVVFRDWSAHHRE*VRAHLR
Trigger: CCTGAGGTGAGCACGGACTCATTCCCTGTGGTGAGC...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGTTGTCTAAAGGTGTCTaGGGACTTTGGCAAGATGTC +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGLSKGV*GLWQDV
Trigger: GACATCTTGCCAAAGTCCTCAGACACCTTTAGACAA...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGACGGGTGGATCTCTTaGGGCCAGGATTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFDGWIS*GQDFET
Trigger: AGTCTCGAAATCCTGGCCTCAAGAGATCCACCCGTC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGTTGTATCTCAAGCCTaGGTGTATACTCAACGACAG +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGVVSQA*VYTQRQ
Trigger: CTGTCGTTGAGTATACACTCAGGCTTGAGATACAAC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GGATACCAGGAAGGGAAATGCGAGGCAGCAATGCGTGAGGGGAAAGCTAGGTCAAATGGGATTTCCAAATaGGGAGAAACAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GYQEGKCEAAMREGKARSNGISK*GETGLL
Trigger: AAGCAAACCTGTTTCTCCTCATTTGGAAATCCCATT...TGACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATTTCCCTTCCTGGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCGGCCATGCCCACACCTaGCTTGGGGGACGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSGHAHT*LGGRFH
Trigger: ATGGAAGCGTCCCCCAAGGCAGGTGTGGGCATGGCC...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCGGCCATGCCCACACCTaGCTTGGGGGACGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESIGHAHT*LGGRFH
Trigger: ATGGAAGCGTCCCCCAAGGCAGGTGTGGGCATGGCC...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTCGGGAGTGCTTCTATaGTCAACTCGGGGGATGCGT +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFSGVLL*STRGMR
Trigger: ACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGA...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGCCGGGGATGCTACTATaGTCACCTTGGGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRPGMLL*SPWELF
Trigger: AAACAGTTCCCAAGGTGAGCATAGTAGCATCCCCGG...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCCTTGGGGGCTACTTCTaGGCTCCCCTTGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESILGGYF*APLGRC
Trigger: GCACCTCCCAAGGGGAGCGCAGAAGTAGCCCCCAAG...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTCAGGAGATGCCTCCATaGTCTCCTTGGGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFQEMPP*SPWVTL
Trigger: AAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTG...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGGATGTCTTGGGGGATaGTTTCACCATCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFGCLGG*FHHRLR
Trigger: CCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGGATGTCTTGGGGGATaGTTTCACCATCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKGCLGG*FHHRLR
Trigger: CCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCTGTCAAAATTTTTGTTaGCGCCTCGGCATTCATAAT +
Preference number: 4 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSCQNFC*RLGIHN
Trigger: ATTATGAATGCCGAGGCGGCAACAAAAATTTTGACA...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTGCTTGGCCTCCAACTaGTTCCTTTGCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMCLASN*FLCHVF
Trigger: AAAGACATGGCAAAGGAAGCAGTTGGAGGCCAAGCA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAATTGGCGTCCCCTTTCTaGAGTGGTGCTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKLASPF*SGASWS
Trigger: AGACCAGGAAGCACCACTGCAGAAAGGGGACGCCAA...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp GGATACCAGGAAGGGAAATGCGAGGCAGCAATGCGTGAGGGGAAAGCTAGGTCAAAACTTCATTCCACATaGAGTGTCCACAATGACACA +
Preference number: 4 (lower is better)
Translates to: GYQEGKCEAAMREGKARSKLHST*SVHNDT
Trigger: TGTGTCATTGTGGACACTGCATGTGGAATGAAGTTT...TGACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATTTCCCTTCCTGGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATAGCAATCTCGTTTGCTaGAGCAACTCGGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHSNLVC*SNSGAG
Trigger: ACCAGCCCCCGAGTTGCTGCAGCAAACGAGATTGCT...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGCATCCACACTTGCCTTaGGAGGTGTCTCTACTTTCT +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMHPHLP*EVSLLS
Trigger: AGAAAGTAGAGACACCTCCCAAGGCAAGTGTGGATG...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTTCCACGCTCACCTCTaGCAGTGCTTCCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFFHAHL*QCFQTH
Trigger: GTGAGTCTGGAAGCACTGCCAGAGGTGAGCGTGGAA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTTCCAGGCTCCCCTCTaGGGCTGCTTCCACGCTCAC +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESIFQAPL*GCFHAH
Trigger: GTGAGCGTGGAAGCAGCCCCAGAGGGGAGCCTGGAA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCCTTCTGCGCTCCCCTTaGGAGGTGCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESILLRSP*EVLPGS
Trigger: GGAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAG...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTGTCCCCTTTCTGCAGTaGTGCTTCCTGGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFVPFLQ*CFLVFL
Trigger: CAGGAAGACCAGGAAGCACCACTGCAGAAAGGGGAC...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATATTAAAATATGTTTTTaGCTCTTTACGGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LVEARGLSLRVEDTRKGNIKICF*LFTDLA
Trigger: AGCCAGGTCCGTAAAGAGCCAAAAACATATTTTAAT...ATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTTGGCAACGGAATTTTaGAGGCCTGCAGATGACAAA +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMLATEF*RPADDK
Trigger: TTTGTCATCTGCAGGCCTTCAAAATTCCGTTGCCAA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTGCTCACCACAGGGAATaGGTCCGTGCTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFAHHRE*VRAHLR
Trigger: CCTGAGGTGAGCACGGACTCATTCCCTGTGGTGAGC...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGCTTTTTGACAGTACTTaGTGCACTTTGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWLFDST*CTLHRQ
Trigger: CTGTCTGTGCAAAGTGCATCAAGTACTGTCAAAAAG...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGCTTCCTGGTCTTCCTaGTCCAGCCATCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKASWSS*SSHPFF
Trigger: GAAGAAAGGATGGCTGGATCAGGAAGACCAGGAAGC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGTGTTTCTGTGACCTTTaGGGCATTCACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGCFCDL*GIHICL
Trigger: AAGACAGATGTGAATGCCTCAAAGGTCACAGAAACA...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCTGGTTTTCGTTGTGTaGCTGGTCATTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGLVFVV*LVILLE
Trigger: TTCCAAAAGAATGACCAGTCACACAACGAAAACCAG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGAGAATTGCTTGAGATaGGGAGGCGGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHENCLR*GGGGCS
Trigger: ACTGCAACCTCCGCCTCCTCATCTCAAGCAATTCTC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGAGCATGAAAGGTGCTaGCTGTTCCAAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKEHERC*LFQDGA
Trigger: AGCCCCATCTTGGAACAGTCAGCACCTTTCATGCTC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAGTTTCCAGCTCAGATaGGACACAAGGAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: RVSSSDETQGGMGFPNEESFQLR*DTRRNG
Trigger: CCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACT...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGTGTGGGGTGTTAGTTTaGGGGACAAACTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRCGVLV*GTNLGL
Trigger: CAAACCCAAGTTTGTCCCTCAAACTAACACCCCACA...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGACAGGGAATGAGTCCGTaGTCACCTCAGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRQGMSP*SPQGPC
Trigger: GCATGGCCCCTGAGGTGAGCACGGACTCATTCCCTG...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGCTCCCCTTGGGAGGTaGTTCCAGGCTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGAPLGR*FQAPLW
Trigger: CCAGAGGGGAGCCTGGAAGCACCTCCCAAGGGGAGC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTTTTGCCTTGGGAGATaGTTCCATGCTTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIFCLGR*FHACFK
Trigger: CTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAA...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCATTAGTCTCATTTTGTTaGTGCCCATCTTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPLVSFC*CPSLSF
Trigger: GAAACTCAAAGATGGGCAGCAACAAAATGAGACTAA...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGAAATGCGAGGCAGCAATaGGTGAGGGGAAAGCTAGGT +
Preference number: 4 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRNARQQ*VRGKLG
Trigger: ACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATT...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTCCTCCTGATCCCTCTTaGTCTGGCTCCAAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFPPDPS*SGSKEL
Trigger: TAACTCCTTGGAGCCAGAGCAAGAGGGATCAGGAGG...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGGTAAAATTTCTACTTTaGAGAATCCCATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKVKFLL*RIPCGR
Trigger: TCTCCCACATGGGATTCTGCAAAGTAGAAATTTTAC...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGACGCCTGTAACACGTaGCTTCCTTTCGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHDACNT*LPFGLF
Trigger: GAACAAGCCGAAAGGAAGCCACGTGTTACAGGCGTC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTGACGCCTGTAACACGTaGCTTCCTTTCGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFDACNT*LPFGLF
Trigger: GAACAAGCCGAAAGGAAGCCACGTGTTACAGGCGTC...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCATCCACACTTGCCTTaGGAGGTGTCTCTACTTTCT +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVHPHLP*EVSLLS
Trigger: AGAAAGTAGAGACACCTCCCAAGGCAAGTGTGGATG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCTACTATGCTCACCTTaGGAACTGTTTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCLLCSP*ELFPGP
Trigger: TGGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTCCTCCATGCTCTCCTTaGGTGACCCTTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFPPCSP*VTLSHS
Trigger: AGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGG...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGACTCAACGACAGAACTaGAGAGTACAGGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMTQRQN*RVQAEK
Trigger: CTTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGT...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTCTCACTGGCAGCCAGTaGCTAGAGAAAGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFLTGSQ*LEKGKQ
Trigger: TTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAG...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAACTCACTGGCAGCCAGTaGCTAGAGAAAGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKLTGSQ*LEKGKQ
Trigger: TTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAG...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTCACGCTCTGGCTCCTTaGCCATCGCTGCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFHALAP*PSLLFY
Trigger: ATAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTG...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCTGTTTGTCCATTTCTaGTTTCTTTGGAGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSILFVHF*FLWSVS
Trigger: AGAGACGCTCCAAAGAAATCAGAAATGGACAAACAG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCTGGTTTTCGTTGTGTaGCTGGTCATTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSILVFVV*LVILLE
Trigger: TTCCAAAAGAATGACCAGTCACACAACGAAAACCAG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCACTGTTTTATGCCTCCTaGTCCCTCTTGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSLFYAS*SLLLWL
Trigger: GAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAG...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTGCAGCAACCATCCGTaGCCGCAGCTCTCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSCSNHP*PQLSQG
Trigger: TCCTTGAGAGAGCTGCGGGCACGGATGGTTGCTGCA...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316077.14
CDS-3UTR GCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCGATTAACCACATCTTaGTTCCTCCTTTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIRLTTS*FLLSLA
Trigger: TGCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCTTTATTGGCGTCTTaGTGTCTCCTTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSISLLAS*CLLFSS
Trigger: AGAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGA...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCGGGTGCATCCACACTTaGCTTGGGAGGTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCGCIHT*LGRCLY
Trigger: GTAGAGACACCTCCCAAGGCAAGTGTGGATGCACCC...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCTTCCATGCTTGTGTTaGAGAATACTTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGLPCLC*RILPHS
Trigger: TGAATGTGGAAGTATTCTGCAACACAAGCATGGAAG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCGGGGGATGCGTCCATaGTCATCTCAGAATCATATG +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHRGMRP*SSQNHM
Trigger: CATATGATTCTGAGATGAGCATGGACGCATCCCCCG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCCGGGGATGCTACTATaGTCACCTTGGGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHPGMLL*SPWELF
Trigger: AAACAGTTCCCAAGGTGAGCATAGTAGCATCCCCGG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTGCTCACCTCTGGCAGTaGTTCCAGACTCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFAHLWQ*FQTHFR
Trigger: CCGGAAGTGAGTCTGGAAGCACTGCCAGAGGTGAGC...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATGGATGTCTTGGGGGATaGTTTCACCATCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNGCLGG*FHHRLR
Trigger: CCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCC...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTAGCGTCTCTCGCTTTTaGCTTGGGAGATGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFSVSRF*LGRCFH
Trigger: ATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCT...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGCAGTTCTTTTGGATTTaGCTGTTAGTGCTGATGGGA +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMQFFWI*LLVLMG
Trigger: TCCCATCAGCACTAACAGGCAAATCCAAAAGAACTG...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGTGTCAAAATTTTTGTTaGCGCCTCGGCATTCATAAT +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWCQNFC*RLGIHN
Trigger: ATTATGAATGCCGAGGCGGCAACAAAAATTTTGACA...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTTTGTGCAGAGGATCTaGTGGTGGTGTTGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVFVQRI*WWCWFH
Trigger: ATGAAACCAACACCACCAGCAGATCCTCTGCACAAA...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGTATGGTATTTCACACTaGATTCTTGTGGTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKYGISH*ILVVFR
Trigger: CCTAAAAACCACAAGAATGCAGTGTGAAATACCATA...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAGAAGAGCAACAACGTaGACAATGTCACACGTGAGC +
Preference number: 4 (lower is better)
Translates to: RVSSSDETQGGMGFPNEERRATT*TMSHVS
Trigger: GCTCACGTGTGACATTGTGCACGTTGTTGCTCTTCT...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGAGTTGTGTTTCTTTATTaGCGTCTTGCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRVVFLY*RLAVSF
Trigger: AAAGGAGACAGCAAGACGCCAATAAAGAAACACAAC...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGATGCAGATCGTTTATTaGCAGTTTTGCTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWMQIVY*QFCSQN
Trigger: ATTCTGAGAGCAAAACTGCCAATAAACGATCTGCAT...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATTTCCACGCTCACCTCTaGCAGTGCTTCCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNFHAHL*QCFQTH
Trigger: GTGAGTCTGGAAGCACTGCCAGAGGTGAGCGTGGAA...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCTTTCACACTCTCCTTaGGGGCTACTTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNLSHSP*GLLLRS
Trigger: GGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAG...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTCTTCAAGGGATGTCTTaGGGGATGCTTTCACCATCG +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFLQGMS*GMLSPS
Trigger: CGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAG...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTCTTCAAGGGATGTCTTaGGGGATGCTTTCACCATCG +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFLQGMS*GMLSPS
Trigger: CGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAG...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGATCTTCATATATGTCATaGCTGGATGTTTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRSSYMS*LDVSVT
Trigger: GGTCACAGAAACATCCAGCCATGACATATATGAAGA...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGCTGTGCCATTTAGAATaGCTGATGGAAACATTTCAT +
Preference number: 4 (lower is better)
Translates to: TSVCISVCPSHELTGSQWLCHLE*LMETFH
Trigger: ATGAAATGTTTCCATCAGCCATTCTAAATGGCACAG...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGGCTCTTTACGGACCTaGCTGGTACCATCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHGSLRT*LVPSSR
Trigger: TCTAGAAGATGGTACCAGCCAGGTCCGTAAAGAGCC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTTTCATCCGCCTTTCTaGTTTTCGTTGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVFHPPF*FSLCDW
Trigger: CCAGTCACACAACGAAAACCAGAAAGGCGGATGAAA...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCAGTGCAGAGGATCTGCTaGTGGTGTTGGTTTCATCCG +
Preference number: 4 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSVQRIC*WCWFHP
Trigger: CGGATGAAACCAACACCACCAGCAGATCCTCTGCAC...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCTCCAGCAAACACATTaGTGGGACAACACAAGAATG +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVLQQTH*WDNTRM
Trigger: CATTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATATCACACGAACTCACTaGCAGCCAGTGGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHITRTH*QPVARE
Trigger: TTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGTGAT...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGTACAATACTCTGAGTaGCAAAGAACCAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIVQYSE*QRTRES
Trigger: AGATTCCCTGGTTCTTTGCCACTCAGAGTATTGTAC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTACTCCCAAAGCAGTGTaGGGTGTTAGTTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFTPKAV*GVSLRD
Trigger: GTCCCTCAAACTAACACCCCACACTGCTTTGGGAGT...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTTGTCGATCTTATATTTaGGGAATGGGTTGCAACACG +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCCRSYI*GMGCNT
Trigger: CGTGTTGCAACCCATTCCTCAAATATAAGATCGACA...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGTGTCGATCTTATATTTaGGGAATGGGTTGCAACACG +
Preference number: 4 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRCRSYI*GMGCNT
Trigger: CGTGTTGCAACCCATTCCTCAAATATAAGATCGACA...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCTGTTTGTCCATTTCTaGTTTCTTTGGAGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCLFVHF*FLWSVS
Trigger: AGAGACGCTCCAAAGAAATCAGAAATGGACAAACAG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCTTTTTGACAGTACTTaGTGCACTTTGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVLFDST*CTLHRQ
Trigger: CTGTCTGTGCAAAGTGCATCAAGTACTGTCAAAAAG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGTTGCTGCCCATCTTTaGGTTTCAAGTGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFVAAHL*VSSGLL
Trigger: CAGAAGACCACTTGAAACTCAAAGATGGGCAGCAAC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGTTGCTGCCCATCTTTaGGTTTCAAGTGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKVAAHL*VSSGLL
Trigger: CAGAAGACCACTTGAAACTCAAAGATGGGCAGCAAC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGTTTACATATCCAAATaGGGAGAAACAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGVYISK*GETGLL
Trigger: AAGCAAACCTGTTTCTCCTCATTTGGATATGTAAAC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGATTCATCTCCCAGGCTaGGTAAGGTTTACATATCCA +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVIHLPG*VRFTYP
Trigger: TGGATATGTAAACCTTACTCAGCCTGGGAGATGAAT...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTACACTGACAAGAGCATaGAAGGTGCTGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFTLTRA*KVLTVP
Trigger: TGGAACAGTCAGCACCTTTCATGCTCTTGTCAGTGT...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTATGCAGTGTCCACAATaGCACAGGCGTAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFMQCPQ*HRRRKC
Trigger: GCATTTTCTACGCCTGTGTCATTGTGGACACTGCAT...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTGGGGGACGCTTCCATaGTTGTGTTGCAGAATACTT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFWGTLP*LCCRIL
Trigger: AAGTATTCTGCAACACAAGCATGGAAGCGTCCCCCA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTCGGGAGTGCTTCTATaGTCAACTCGGGGGATGCGT +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFSGVLL*STRGMR
Trigger: ACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTGGGAGATGCTTCCATaGTTGCTTCAAGGGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFWEMLP*LLQGMS
Trigger: AGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGGCATTCATAATACCTaGAGTACTCTTATTACCAGA +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGGIHNT*STLITR
Trigger: TCTGGTAATAAGAGTACTGCAGGTATTATGAATGCC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTTTCAAGTGGTCTTCTaGTTGGCCTCCAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFFQVVF*LASNCF
Trigger: GAAGCAGTTGGAGGCCAAGCAGAAGACCACTTGAAA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCGATCCTGCGGCCCTTaGATAATCTATTCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHRSCGP*IIYSVL
Trigger: GAGAACAGAATAGATTATGCAAGGGCCGCAGGATCG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGTGTGCATTTCTGTGTaGCCATCACACGAACTCACT +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHVCISV*PSHELT
Trigger: AGTGAGTTCGTGTGATGGGCACACAGAAATGCACAC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACACAGCACCAAAGACACTaGTCTGGTGTCTGTGACATA +
Preference number: 4 (lower is better)
Translates to: PSPVRRKISTLQNPMWETQHQRH*SGVCDI
Trigger: TATGTCACAGACACCAGAGCAGTGTCTTTGGTGCTG...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGTTGTGTTTCTTTATTaGCGTCTTGCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIVVFLY*RLAVSF
Trigger: AAAGGAGACAGCAAGACGCCAATAAAGAAACACAAC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCTACTATGCTCACCTTaGGAACTGTTTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHLLCSP*ELFPGP
Trigger: TGGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTTCCACGCTCACCTCTaGCAGTGCTTCCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFFHAHL*QCFQTH
Trigger: GTGAGTCTGGAAGCACTGCCAGAGGTGAGCGTGGAA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCCTTTCACACTCTCCTTaGGGGCTACTTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESILSHSP*GLLLRS
Trigger: GGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAG...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGGAGGGCAGTTCTTTTaGATTTGCCTGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHGGQFF*ICLLVL
Trigger: CAGCACTAACAGGCAAATCCAAAAGAACTGCCCTCC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGGAGGGCAGTTCTTTTaGATTTGCCTGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFGGQFF*ICLLVL
Trigger: CAGCACTAACAGGCAAATCCAAAAGAACTGCCCTCC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTCTTCATATATGTCATaGCTGGATGTTTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMSSYMS*LDVSVT
Trigger: GGTCACAGAAACATCCAGCCATGACATATATGAAGA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCAGCAAACACATTGGTaGGACAACACAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCQQTHW*DNTRMR
Trigger: TCTCATTCTTGTGTTGTCCCACCAATGTGTTTGCTG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCAGCATTGAAAATGCCTaGCTGGGCACGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCSIENA*LGTVAH
Trigger: ATGAGCCACCGTGCCCAGCCAGGCATTTTCAATGCT...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTGGTCATGTCTCACTTaGTTGATGGCAGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFWSCLT*LMAAFS
Trigger: TGAGAAGGCTGCCATCAACCAAGTGAGACATGACCA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR TCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTTGAAGGCCTGCAGATaGCAAAGGCATTTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHLKACR*QRHLSD
Trigger: ATCAGACAAATGCCTTTGTCATCTGCAGGCCTTCAA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACGCAAGGGTACAGTaGCATACTGCATTACATAAT +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVYARVQ*HTALHN
Trigger: ATTATGTAATGCAGTATGTCACTGTACCCTTGCGTA...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGCTTTGCCATGTCTTTTaGTTTCTTAATGACCCTTTG +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMLCHVF*FLNDPL
Trigger: CAAAGGGTCATTAAGAAATCAAAAGACATGGCAAAG...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTTGTCAGCTTCCTCTTaGGCTTTTATTTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFLSASS*AFILAS
Trigger: GGACGCCAAAATAAAAGCTCAAGAGGAAGCTGACAA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGATTGTCAGCTTCCTCTTaGGCTTTTATTTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRLSASS*AFILAS
Trigger: GGACGCCAAAATAAAAGCTCAAGAGGAAGCTGACAA...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTAAACATTTCATTCAATaGGTCCTTGTCGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIKHFIQ*VLVAFF
Trigger: GAAGAAAGCGACAAGGACTCATTGAATGAAATGTTT...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTGACAGGAGAATTGCTTaGGATGAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFDRRIA*DEEAEV
Trigger: AACCTCCGCCTCCTCATCTCAAGCAATTCTCCTGTC...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGTTGTATCTCAAGCCTaGGTGTATACTCAACGACAG +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHVVSQA*VYTQRQ
Trigger: CTGTCGTTGAGTATACACTCAGGCTTGAGATACAAC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTTAATGACCCTTTGCTaGATTTCTTCCCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVLMTLC*ISSRCL
Trigger: AAGACAACGGGAAGAAATGCAGCAAAGGGTCATTAA...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTTAGTCTCATTTTGTTaGTGCCCATCTTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMLVSFC*CPSLSF
Trigger: GAAACTCAAAGATGGGCAGCAACAAAATGAGACTAA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACATCTTTGAGTTTCAAGTaGTCTTCTGCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSPVRRKISTLQNPMWETSLSFK*SSAWPP
Trigger: TGGAGGCCAAGCAGAAGACCACTTGAAACTCAAAGA...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATGGCTCTTTACGGACCTaGCTGGTACCATCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNGSLRT*LVPSSR
Trigger: TCTAGAAGATGGTACCAGCCAGGTCCGTAAAGAGCC...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGACTGGTCATTCTTTTaGAAGATGGTCTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMDWSFF*KMVLKL
Trigger: TAGTTTCAAGACCATCTTCCAAAAGAATGACCAGTC...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGTTTGGCAAGATGTCATaGAATCCTTCAGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: GLPAFQVISACVLTGTDGFGKMS*NPSDFV
Trigger: AACAAAATCTGAAGGATTCCATGACATCTTGCCAAA...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAACTCCAGCAAACACATTaGTGGGACAACACAAGAATG +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKLQQTH*WDNTRM
Trigger: CATTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAG...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTCTGTTTGTCCATTTCTaGTTTCTTTGGAGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFLFVHF*FLWSVS
Trigger: AGAGACGCTCCAAAGAAATCAGAAATGGACAAACAG...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTGTTTCTGTGACCTTTaGGGCATTCACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFCFCDL*GIHICL
Trigger: AAGACAGATGTGAATGCCTCAAAGGTCACAGAAACA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTTGTTTCTGTGACCTTTaGGGCATTCACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFCFCDL*GIHICL
Trigger: AAGACAGATGTGAATGCCTCAAAGGTCACAGAAACA...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTGTTTACATATCCAAATaGGGAGAAACAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TRTHWQPVARERQANFGCVYISK*GETGLL
Trigger: AAGCAAACCTGTTTCTCCTCATTTGGATATGTAAAC...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATATTCATCTCCCAGGCTaGGTAAGGTTTACATATCCA +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHIHLPG*VRFTYP
Trigger: TGGATATGTAAACCTTACTCAGCCTGGGAGATGAAT...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCAGCAATCTCGTTTGCTaGAGCAACCATCCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGSNLVC*SNHPCP
Trigger: CGGGCACGGATGGTTGCTGCAGCAAACGAGATTGCT...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316077.14
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTCTTAGCAATCTCGTTTaGTGCAGCAACCATCCGTGC +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFLSNLV*CSNHPC
Trigger: GCACGGATGGTTGCTGCAGCAAACGAGATTGCTAAG...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316077.14
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAATCTTTATTGGCGTCTTaGTGTCTCCTTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKSLLAS*CLLFSS
Trigger: AGAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGA...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTCGGGGGATGCGTCCATaGTCATCTCAGAATCATATG +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFRGMRP*SSQNHM
Trigger: CATATGATTCTGAGATGAGCATGGACGCATCCCCCG...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCTGGGAGATGCTTCCATaGTTGCTTCAAGGGATGTCT +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCWEMLP*LLQGMS
Trigger: AGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCA...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAAGCGTCTCTCGCTTTTaGCTTGGGAGATGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRSVSRF*LGRCFH
Trigger: ATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCTTTCAAGTGGTCTTCTaGTTGGCCTCCAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: GILYGISHCILVVFRDWSFQVVF*LASNCF
Trigger: GAAGCAGTTGGAGGCCAAGCAGAAGACCACTTGAAA...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCTTGGCGTCCCCTTTCTaGAGTGGTGCTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGLASPF*SGASWS
Trigger: AGACCAGGAAGCACCACTGCAGAAAGGGGACGCCAA...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGCTTATATTTGAGGAATaGGTTGCAACACGATTAACC +
Preference number: 4 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRLIFEE*VATRLT
Trigger: GGTTAATCGTGTTGCAACCCATTCCTCAAATATAAG...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTCTTCAAGGGATGTCTTaGGGGATGCTTTCACCATCG +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFLQGMS*GMLSPS
Trigger: CGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAG...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGTCCCCTTTCTGCAGTaGTGCTTCCTGGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGVPFLQ*CFLVFL
Trigger: CAGGAAGACCAGGAAGCACCACTGCAGAAAGGGGAC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACACTTTACGGACCTGGCTaGTACCATCTTCTAGAAATA +
Preference number: 4 (lower is better)
Translates to: PSPVRRKISTLQNPMWETLYGPG*YHLLEI
Trigger: TATTTCTAGAAGATGGTACCAGCCAGGTCCGTAAAG...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTATTAAAATATGTTTTTaGCTCTTTACGGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIIKICF*LFTDLA
Trigger: AGCCAGGTCCGTAAAGAGCCAAAAACATATTTTAAT...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCAGCAAACACATTGGTaGGACAACACAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHQQTHW*DNTRMR
Trigger: TCTCATTCTTGTGTTGTCCCACCAATGTGTTTGCTG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTATCACACGAACTCACTaGCAGCCAGTGGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFITRTH*QPVARE
Trigger: TTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGTGAT...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGTACAATACTCTGAGTaGCAAAGAACCAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFVQYSE*QRTRES
Trigger: AGATTCCCTGGTTCTTTGCCACTCAGAGTATTGTAC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCACAGTGTCCATCACCTTaGCCTTGTAAACAGGAACAT +
Preference number: 4 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSQCPSP*PCKQEH
Trigger: ATGTTCCTGTTTACAAGGCCAAGGTGATGGACACTG...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
3UTR CAA 72 bp GCACATGTAAACCTAACTGCAATGATTACAATACAGTaGGGGAAATTAGAATCAGATGGGTGCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: AHVNLTAMITIQ*GKLESDGCLGP
Trigger: GGGTCCTAGGCACCCATCTGATTCTAATTTCCCCAACTGTATTGTAATCATTGCAGTTAGGTTTACATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCGAAAAATTTGAGGACTaGTGGGCCCAGGAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSEKFED*WAQELS
Trigger: ACTCAACTCCTGGGCCCATCAGTCCTCAAATTTTTC...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAAGAAGCAGAAAAATTTaGGGACTGATGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRRSRKI*GLMGPG
Trigger: TCCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGAGAATTGCTTGAGATaGGGAGGCGGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGENCLR*GGGGCS
Trigger: ACTGCAACCTCCGCCTCCTCATCTCAAGCAATTCTC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTACACTGACAAGAGCATaGAAGGTGCTGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFTLTRA*KVLTVP
Trigger: TGGAACAGTCAGCACCTTTCATGCTCTTGTCAGTGT...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCGTGGAGTCTCAAAACTaGAAAGGCTGCAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: GILYGISHCILVVFRDWSVESQN*KGCRDC
Trigger: ACAATCTCTGCAGCCTTTTCAGTTTTGAGACTCCAC...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCCTCATAGAGTTGTTGTaGGCATTGAAAATGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GILYGISHCILVVFRDWSLIELL*ALKMPG
Trigger: GCCAGGCATTTTCAATGCTCACAACAACTCTATGAG...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCCACAGAGGACCAGGGTaGCCCTGCTGTCTAATTTCA +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGHRGPG*PCCLIS
Trigger: TGAAATTAGACAGCAGGGTCACCCTGGTCCTCTGTG...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGTTTATTGGCAGTTTTaGTCTCAGAATTCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFVYWQF*SQNSPL
Trigger: CAATGGCGAATTCTGAGAGCAAAACTGCCAATAAAC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAACTTCCATGCTTGTGTTaGAGAATACTTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKLPCLC*RILPHS
Trigger: TGAATGTGGAAGTATTCTGCAACACAAGCATGGAAG...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACACTTCCATGCTTGTGTTaGAGAATACTTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: PSPVRRKISTLQNPMWETLPCLC*RILPHS
Trigger: TGAATGTGGAAGTATTCTGCAACACAAGCATGGAAG...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTGGGGGACGCTTCCATaGTTGTGTTGCAGAATACTT +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSWGTLP*LCCRIL
Trigger: AAGTATTCTGCAACACAAGCATGGAAGCGTCCCCCA...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGATGGGAGATGCTTCCATaGTTGCTTCAAGGGATGTCT +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRWEMLP*LLQGMS
Trigger: AGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCA...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCTTTTGCCTTGGGAGATaGTTCCATGCTTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCFCLGR*FHACFK
Trigger: CTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAA...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACATTCTTAATGACCCTTTaGTGCATTTCTTCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: PSPVRRKISTLQNPMWETFLMTL*CISSRC
Trigger: ACAACGGGAAGAAATGCAGCAAAGGGTCATTAAGAA...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTTCTTAATGACCCTTTaGTGCATTTCTTCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHFLMTL*CISSRC
Trigger: ACAACGGGAAGAAATGCAGCAAAGGGTCATTAAGAA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGTCTCATTTTGTTGCTaGCCATCTTTGAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFVSFCC*PSLSFK
Trigger: CTTGAAACTCAAAGATGGGCAGCAACAAAATGAGAC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATTTTGTGCAGAGGATCTaGTGGTGGTGTTGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNFVQRI*WWCWFH
Trigger: ATGAAACCAACACCACCAGCAGATCCTCTGCACAAA...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTCTTGTGAGCGATCCTaGGGCCCTTGCATAATCTAT +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFSCERS*GPCIIY
Trigger: ATAGATTATGCAAGGGCCGCAGGATCGCTCACAAGA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTCTTGTGAGCGATCCTaGGGCCCTTGCATAATCTAT +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESISCERS*GPCIIY
Trigger: ATAGATTATGCAAGGGCCGCAGGATCGCTCACAAGA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTGTGTGCATTTCTGTGTaGCCATCACACGAACTCACT +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFVCISV*PSHELT
Trigger: AGTGAGTTCGTGTGATGGGCACACAGAAATGCACAC...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAAAAGGAACACTGGCCTaGTTCAGACTATTTACGATT +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKKGTLA*FRLFTI
Trigger: AATCGTAAATAGTCTGAAGCAGGCCAGTGTTCCTTT...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTAAAGGAACACTGGCCTaGTTCAGACTATTTACGATT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFKGTLA*FRLFTI
Trigger: AATCGTAAATAGTCTGAAGCAGGCCAGTGTTCCTTT...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCTATCAAGAACCTCTCTaGTTGTGGTTAACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCYQEPL*LWLTGW
Trigger: CCACCCTGTTAACCACAAGCAGAGAGGTTCTTGATA...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCTTTCATCCGCCTTTCTaGTTTTCGTTGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCFHPPF*FSLCDW
Trigger: CCAGTCACACAACGAAAACCAGAAAGGCGGATGAAA...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGTGCAGAGGATCTGCTaGTGGTGTTGGTTTCATCCG +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGVQRIC*WCWFHP
Trigger: CGGATGAAACCAACACCACCAGCAGATCCTCTGCAC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCGGTAGACAGTTTCAATaGATGGATCAACAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCGRQFQ*MDQQDL
Trigger: CAGGTCCTGTTGATCCATCCATTGAAACTGTCTACC...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATGAACCTCTCTGCTTGTaGTTAACAGGGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDEPLCL*LTGWAL
Trigger: CAGAGCCCACCCTGTTAACCACAAGCAGAGAGGTTC...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTGAAGGCCTGCAGATaGCAAAGGCATTTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSLKACR*QRHLSD
Trigger: ATCAGACAAATGCCTTTGTCATCTGCAGGCCTTCAA...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCTTTGCCATGTCTTTTaGTTTCTTAATGACCCTTTG +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHLCHVF*FLNDPL
Trigger: CAAAGGGTCATTAAGAAATCAAAAGACATGGCAAAG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTTGTCAGCTTCCTCTTaGGCTTTTATTTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESILSASS*AFILAS
Trigger: GGACGCCAAAATAAAAGCTCAAGAGGAAGCTGACAA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCCTGGTTTTCGTTGTGTaGCTGGTCATTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCLVFVV*LVILLE
Trigger: TTCCAAAAGAATGACCAGTCACACAACGAAAACCAG...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTTGTCTAAAGGTGTCTaGGGACTTTGGCAAGATGTC +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESILSKGV*GLWQDV
Trigger: GACATCTTGCCAAAGTCCTCAGACACCTTTAGACAA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCTCTTTATTGGCGTCTTaGTGTCTCCTTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCSLLAS*CLLFSS
Trigger: AGAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGA...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGGCATTCATAATACCTaGAGTACTCTTATTACCAGA +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKGIHNT*STLITR
Trigger: TCTGGTAATAAGAGTACTGCAGGTATTATGAATGCC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTTAGTCTCATTTTGTTaGTGCCCATCTTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFLVSFC*CPSLSF
Trigger: GAAACTCAAAGATGGGCAGCAACAAAATGAGACTAA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTTTGTGCAGAGGATCTaGTGGTGGTGTTGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFFVQRI*WWCWFH
Trigger: ATGAAACCAACACCACCAGCAGATCCTCTGCACAAA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTGAGGAGAAACAGGTTTaGTTCTTCTCTTATTGTCTA +
Preference number: 4 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFEEKQV*FFSYCL
Trigger: TAGACAATAAGAGAAGAAGCAAACCTGTTTCTCCTC...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCACCTGGAACAAATGCTaGTCTCCACAAATTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GILYGISHCILVVFRDWSTWNKC*SPQISV
Trigger: CACTGAAATTTGTGGAGAGCAGCATTTGTTCCAGGT...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAACTTATATTTGAGGAATaGGTTGCAACACGATTAACC +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKLIFEE*VATRLT
Trigger: GGTTAATCGTGTTGCAACCCATTCCTCAAATATAAG...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAATGCAGATCGTTTATTaGCAGTTTTGCTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKMQIVY*QFCSQN
Trigger: ATTCTGAGAGCAAAACTGCCAATAAACGATCTGCAT...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTCTTTGAGTTTCAAGTaGTCTTCTGCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESISLSFK*SSAWPP
Trigger: TGGAGGCCAAGCAGAAGACCACTTGAAACTCAAAGA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACACTGTGCCATTTAGAATaGCTGATGGAAACATTTCAT +
Preference number: 4 (lower is better)
Translates to: PSPVRRKISTLQNPMWETLCHLE*LMETFH
Trigger: ATGAAATGTTTCCATCAGCCATTCTAAATGGCACAG...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTTTCATCCGCCTTTCTaGTTTTCGTTGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFFHPPF*FSLCDW
Trigger: CCAGTCACACAACGAAAACCAGAAAGGCGGATGAAA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAACTCAACGACAGAACTaGAGAGTACAGGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRTQRQN*RVQAEK
Trigger: CTTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCAGACACAAGGAGGAATaGGATTTCCAAATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GILYGISHCILVVFRDWSRHKEE*DFQMRR
Trigger: TCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCT...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR TCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGATGTCGATCTTATATTTaGGGAATGGGTTGCAACACG +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRCRSYI*GMGCNT
Trigger: CGTGTTGCAACCCATTCCTCAAATATAAGATCGACA...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCCTTTTTGACAGTACTTaGTGCACTTTGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSLFDST*CTLHRQ
Trigger: CTGTCTGTGCAAAGTGCATCAAGTACTGTCAAAAAG...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTCAAAAGGAAACACTaGCAAGAGCATGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSFKRKH*QEHERC
Trigger: GCACCTTTCATGCTCTTGTCAGTGTTTCCTTTTGAA...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCAAAAGTACAATACTCTaGGTGGCAAAGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSKSTIL*VAKNQG
Trigger: TCCCTGGTTCTTTGCCACTCAGAGTATTGTACTTTT...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTAAAAGTACAATACTCTaGGTGGCAAAGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFKSTIL*VAKNQG
Trigger: TCCCTGGTTCTTTGCCACTCAGAGTATTGTACTTTT...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATCAGGGAATTGCCCCCTaGCATGATAAAATGTCATGC +
Preference number: 4 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDQGIAP*HDKMSC
Trigger: GCATGACATTTTATCATGTCAGGGGGCAATTCCCTG...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCCGATTAACCACATCTTaGTTCCTCCTTTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSRLTTS*FLLSLA
Trigger: TGCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCG...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTAAGTTTTTCAGTAGATaGAGATCGTTTATTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFKFFSR*RSFIGS
Trigger: ACTGCCAATAAACGATCTGCATCTACTGAAAAACTT...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTCAGTTCTTTTGGATTTaGCTGTTAGTGCTGATGGGA +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFQFFWI*LLVLMG
Trigger: TCCCATCAGCACTAACAGGCAAATCCAAAAGAACTG...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCTGCTTGGCCTCCAACTaGTTCCTTTGCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGCLASN*FLCHVF
Trigger: AAAGACATGGCAAAGGAAGCAGTTGGAGGCCAAGCA...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATGTCTCATTTTGTTGCTaGCCATCTTTGAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LSELDPSPVRRKISTLQNVSFCC*PSLSFK
Trigger: CTTGAAACTCAAAGATGGGCAGCAACAAAATGAGAC...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCCGATCCTGCGGCCCTTaGATAATCTATTCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGRSCGP*IIYSVL
Trigger: GAGAACAGAATAGATTATGCAAGGGCCGCAGGATCG...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTGGATCCATCGATTACTaGTTTAAATGTCGATCTTAT +
Preference number: 4 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFGSIDY*FKCRSY
Trigger: ATAAGATCGACATTTAAACCAGTAATCGATGGATCC...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCCTTTACGGACCTGGCTaGTACCATCTTCTAGAAATA +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESILYGPG*YHLLEI
Trigger: TATTTCTAGAAGATGGTACCAGCCAGGTCCGTAAAG...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGACTTTACGGACCTGGCTaGTACCATCTTCTAGAAATA +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRLYGPG*YHLLEI
Trigger: TATTTCTAGAAGATGGTACCAGCCAGGTCCGTAAAG...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATATTAAAATATGTTTTTaGCTCTTTACGGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHIKICF*LFTDLA
Trigger: AGCCAGGTCCGTAAAGAGCCAAAAACATATTTTAAT...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAATTTGGCAAGATGTCATaGAATCCTTCAGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: ISSLSVYSTTELESTGRKFGKMS*NPSDFV
Trigger: AACAAAATCTGAAGGATTCCATGACATCTTGCCAAA...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCAGCCAAAAGGAACACTaGCCTGCTTCAGACTATTTA +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESISQKEH*PASDYL
Trigger: TAAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCT...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTACTAATCCAAGACTaGCAGCCAAAAGGAACACTG +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSLLIQD*QPKGTL
Trigger: CAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAACAAAGGCATTTGTCTaGTTAAAGCAGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRTKAFV*LKQKYP
Trigger: AGGGTACTTCTGCTTTAATCAGACAAATGCCTTTGT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTACGCAAGGGTACAGTaGCATACTGCATTACATAAT +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESIYARVQ*HTALHN
Trigger: ATTATGTAATGCAGTATGTCACTGTACCCTTGCGTA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCAAACATTTCATTCAATaGGTCCTTGTCGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCKHFIQ*VLVAFF
Trigger: GAAGAAAGCGACAAGGACTCATTGAATGAAATGTTT...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAGTTTATTGGCAGTTTTaGTCTCAGAATTCGCCATTG +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRVYWQF*SQNSPL
Trigger: CAATGGCGAATTCTGAGAGCAAAACTGCCAATAAAC...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGATTAATGACCCTTTGCTaGATTTCTTCCCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRLMTLC*ISSRCL
Trigger: AAGACAACGGGAAGAAATGCAGCAAAGGGTCATTAA...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTCTTAATGACCCTTTaGTGCATTTCTTCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSFLMTL*CISSRC
Trigger: ACAACGGGAAGAAATGCAGCAAAGGGTCATTAAGAA...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAGTCTCATTTTGTTGCTaGCCATCTTTGAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRVSFCC*PSLSFK
Trigger: CTTGAAACTCAAAGATGGGCAGCAACAAAATGAGAC...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCTCTTTGAGTTTCAAGTaGTCTTCTGCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGSLSFK*SSAWPP
Trigger: TGGAGGCCAAGCAGAAGACCACTTGAAACTCAAAGA...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCGACTGGTCATTCTTTTaGAAGATGGTCTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCDWSFF*KMVLKL
Trigger: TAGTTTCAAGACCATCTTCCAAAAGAATGACCAGTC...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGATTGAGTTATCCAGAGTaGAAGATGTATTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRLSYPE*KMYSSP
Trigger: GGGAGATGAATACATCTTCCACTCTGGATAACTCAA...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCAAACATTTCATTCAATaGGTCCTTGTCGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSKHFIQ*VLVAFF
Trigger: GAAGAAAGCGACAAGGACTCATTGAATGAAATGTTT...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCTTCAAAAGGAAACACTaGCAAGAGCATGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGFKRKH*QEHERC
Trigger: GCACCTTTCATGCTCTTGTCAGTGTTTCCTTTTGAA...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTGTCAAAATTTTTGTTaGCGCCTCGGCATTCATAAT +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFCQNFC*RLGIHN
Trigger: ATTATGAATGCCGAGGCGGCAACAAAAATTTTGACA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCGAGGAGAAACAGGTTTaGTTCTTCTCTTATTGTCTA +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSEEKQV*FFSYCL
Trigger: TAGACAATAAGAGAAGAAGCAAACCTGTTTCTCCTC...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTCTGTGCCATTTAGAATaGCTGATGGAAACATTTCAT +
Preference number: 4 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFLCHLE*LMETFH
Trigger: ATGAAATGTTTCCATCAGCCATTCTAAATGGCACAG...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCACTCACTGGCACAGATaGGTAGAGTTAAAAATATAC +
Preference number: 4 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSTHWHR*VELKIY
Trigger: GTATATTTTTAACTCTACCCATCTGTGCCAGTGAGT...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCACTCACTGGCACAGATaGGTAGAGTTAAAAATATAC +
Preference number: 4 (lower is better)
Translates to: FCNQILLETPQLQFQESITHWHR*VELKIY
Trigger: GTATATTTTTAACTCTACCCATCTGTGCCAGTGAGT...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCTTACTAATCCAAGACTaGCAGCCAAAAGGAACACTG +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGLLIQD*QPKGTL
Trigger: CAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCACAAAGGCATTTGTCTaGTTAAAGCAGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGTKAFV*LKQKYP
Trigger: AGGGTACTTCTGCTTTAATCAGACAAATGCCTTTGT...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAAAGTTTTTCAGTAGATaGAGATCGTTTATTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRKFFSR*RSFIGS
Trigger: ACTGCCAATAAACGATCTGCATCTACTGAAAAACTT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGTTGTGTTTCTTTATTaGCGTCTTGCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGVVFLY*RLAVSF
Trigger: AAAGGAGACAGCAAGACGCCAATAAAGAAACACAAC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCTTGAGTTATCCAGAGTaGAAGATGTATTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGLSYPE*KMYSSP
Trigger: GGGAGATGAATACATCTTCCACTCTGGATAACTCAA...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR TCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCAAGAACCAGGGAATCTaGAAGAATTACCTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGKNQGI*KNYLLL
Trigger: TAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTT...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR GCA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATGGCATTCATAATACCTaGAGTACTCTTATTACCAGA +
Preference number: 4 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDGIHNT*STLITR
Trigger: TCTGGTAATAAGAGTACTGCAGGTATTATGAATGCC...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR GCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCCTAATTTCAACAGGCTaGTCTGTACCATTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGLISTG*SVPFPF
Trigger: AAAAGGAAATGGTACAGAGCAGCCTGTTGAAATTAG...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGACTGGTCATTCTTTTaGAAGATGGTCTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGDWSFF*KMVLKL
Trigger: TAGTTTCAAGACCATCTTCCAAAAGAATGACCAGTC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CCA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGGATCCATCGATTACTaGTTTAAATGTCGATCTTAT +
Preference number: 4 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGGSIDY*FKCRSY
Trigger: ATAAGATCGACATTTAAACCAGTAATCGATGGATCC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS GCA 90 bp CCGTGCCCGCAGCTCTCTCAAGGATGGGCTGCCGCCAGCGCCAGCTaGGGCGCCGTCCGCCATCATCGGAGTCGGGACCGGAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: PCPQLSQGWAAASAS*GAVRHHRSRDRRRW
Trigger: CCACCGCCTCCGGTCCCGACTCCGATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTGCGGGCACGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370660.3
CDS GCA 90 bp TTGCTGCAGCAACCATCCGTGCCCGCAGCTCTCTCAAGGATGGGCTaGCGCCAGCGCCAGCTGCGGCGCCGTCCGCCATCATCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: LLQQPSVPAALSRMG*RQRQLRRRPPSSES
Trigger: CGACTCCGATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTGCGGGCACGGATGGTTGCTGCAGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
CDS CCA 90 bp CTCGTTTGCTGCAGCAACCATCCGTGCCCGCAGCTCTCTCAAGGATaGGCTGCCGCCAGCGCCAGCTGCGGCGCCGTCCGCCATCATCGG +
Preference number: 5 (lower is better)
Translates to: LVCCSNHPCPQLSQG*AAASASCGAVRHHR
Trigger: CCGATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTGCGGGCACGGATGGTTGCTGCAGCAAACGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
CDS GCA 90 bp TTCCACGCTCACCTCTGGCAGTGCTTCCAGACTCACTTCCGGGGGTaGTTCCAGGCTCGCCTCCGGGGATGCTACTATGCTCACCTTGGG +
Preference number: 5 (lower is better)
Translates to: FHAHLWQCFQTHFRG*FQARLRGCYYAHLG
Trigger: CCCAAGGTGAGCATAGTAGCATCCCCGGAGGCGAGCCTGGAAGCACCCCCGGAAGTGAGTCTGGAAGCACTGCCAGAGGTGAGCGTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 90 bp GAGATGCCTCCATGCTCTCCTTGGGTGACCCTTTCACACTCTCCTTaGGGGCTACTTCTGCGCTCCCCTTGGGAGGTGCTTCCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: EMPPCSPWVTLSHSP*GLLLRSPWEVLPGS
Trigger: GGAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 90 bp GGGATGCTTTCACCATCGCCTCAGGAGATGCCTCCATGCTCTCCTTaGGTGACCCTTTCACACTCTCCTTGGGGGCTACTTCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GMLSPSPQEMPPCSP*VTLSHSPWGLLLRS
Trigger: GGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGGATCTGCTGGTGGTGTaGGTTTCATCCGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGDLLVV*VSSAFL
Trigger: CAGAAAGGCGGATGAAACCAACACCACCAGCAGATC...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAGTTTCGGGGCCTGTTTaGACCAACCAGGCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPVSGPV*TNQAGQ
Trigger: CTGGCCGGCCTGGTTGGTCAAAACAGGCCCCGAAAC...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS TCA 90 bp TGCTTTCACCATCGCCTCAGGAGATGCCTCCATGCTCTCCTTGGGTaGCCCTTTCACACTCTCCTTGGGGGCTACTTCTGCGCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: CFHHRLRRCLHALLG*PFHTLLGGYFCAPL
Trigger: AAGGGGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGACTTCTGCGCTCCCCTaGGGAGGTGCTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWTSALP*GGASRL
Trigger: GAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAGT...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATGAGCGTCTCTCGCTTTaGCCTTGGGAGATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LVEARGLSLRVEDTRKGNERLSL*PWEMLP
Trigger: TGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTC...ATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS TCA 90 bp CTCGTTTGCTGCAGCAACTCGGGGGCTGGTCATGTCTCACTTGGTTaGTGGCAGCCTTCTCAGCTCTGGAATTCCCACTGCAGCACTGCT +
Preference number: 5 (lower is better)
Translates to: LVCCSNSGAGHVSLG*WQPSQLWNSHCSTA
Trigger: AGCAGTGCTGCAGTGGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCAGCAAACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGAACATCCTGGTAGACAGTTTCAATGGATGGATCAACAGGACCTGGCGCCAACTTCTGCGCTCCCCTaGGGAGGTGCTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: QEHPGRQFQWMDQQDLAPTSALP*GGASRL
Trigger: GAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAGT...TGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATGCGAGGCAGCAACAAGTGGTCTTCTGCTaGGCCTCCAACTGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RGLSLRVEDTRKGNARQQQVVFC*ASNCFL
Trigger: AAGGAAGCAGTTGGAGGCCAAGCAGAAGACCACTTG...TTGCTGCCTCGCATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCACCACGCTCTGGCTCCTaGGCCATCGCTGCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPPRSGS*AIAAVL
Trigger: TAAAACAGCAGCGATGGCCAAGGAGCCAGAGCGTGG...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS GCA 90 bp TGCTCAACTCGGGGGATGCGTCCATGCTCATCTCAGAATCATATGTaGTCACCACAGGCGACACGTCCACGCTCACCACAGGGAATGAGT +
Preference number: 5 (lower is better)
Translates to: CSTRGMRPCSSQNHM*SPQATRPRSPQGMS
Trigger: ACTCATTCCCTGTGGTGAGCGTGGACGTGTCGCCTGTGGTGAGCACATATGATTCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 90 bp CCACCTTCGGGAGTGCTTCTATGCTCAACTCGGGGGATGCGTCCATaGTCATCTCAGAATCATATGTGCTCACCACAGGCGACACGTCCA +
Preference number: 5 (lower is better)
Translates to: PPSGVLLCSTRGMRP*SSQNHMCSPQATRP
Trigger: TGGACGTGTCGCCTGTGGTGAGCACATATGATTCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 90 bp CTTGGGAGATGCTTCCATGCTTGCTTCAAGGGATGTCTTGGGGGATaGTTTCACCATCGCCTCAGGAGATGCCTCCATGCTCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LGRCFHACFKGCLGG*FHHRLRRCLHALLG
Trigger: CCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 90 bp CAATCTCGTTTGCTGCAGCAACTCGGGGGCTGGTCATGTCTCACTTaGTTGATGGCAGCCTTCTCAGCTCTGGAATTCCCACTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: QSRLLQQLGGWSCLT*LMAAFSALEFPLQH
Trigger: GTGCTGCAGTGGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCAGCAAACGAGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR CAA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGTCTCAGAATTCGCCATaGCAGAGCCTCCCCATGACC +
Preference number: 5 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKSQNSP*QSLPMT
Trigger: GGTCATGGGGAGGCTCTGCAATGGCGAATTCTGAGA...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS GCA 90 bp TTCCAGGTCCACCTTCGGGAGTGCTTCTATGCTCAACTCGGGGGATaGGTCCATGCTCATCTCAGAATCATATGTGCTCACCACAGGCGA +
Preference number: 5 (lower is better)
Translates to: FQVHLRECFYAQLGG*VHAHLRIICAHHRR
Trigger: TCGCCTGTGGTGAGCACATATGATTCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGACCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGTCTCAGAATTCGCCATaGCAGAGCCTCCCCATGACC +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWSQNSP*QSLPMT
Trigger: GGTCATGGGGAGGCTCTGCAATGGCGAATTCTGAGA...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS GCA 90 bp TACTATGCTCACCTTGGGAACTGTTTCCAGGTCCACCTTCGGGAGTaGTTCTATGCTCAACTCGGGGGATGCGTCCATGCTCATCTCAGA +
Preference number: 5 (lower is better)
Translates to: YYAHLGNCFQVHLRE*FYAQLGGCVHAHLR
Trigger: TCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGACCTGGAAACAGTTCCCAAGGTGAGCATAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 90 bp CTTTTGCCTTGGGAGATGCTTCCATGCTTGCTTCAAGGGATGTCTTaGGGGATGCTTTCACCATCGCCTCAGGAGATGCCTCCATGCTCT +
Preference number: 5 (lower is better)
Translates to: LLPWEMLPCLLQGMS*GMLSPSPQEMPPCS
Trigger: AGAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGGTGCATCCACACTaGCCTTGGGAGGTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMGVHPH*PWEVSL
Trigger: TAGAGACACCTCCCAAGGCAAGTGTGGATGCACCCC...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AACAACGTGCACAATGTCACACGTGAGCTAGCAGCCCTCTCAGCTGGGTTCAGGGGGACGCTTCCATGCTaGTGTTGCAGAATACTTCCA +
Preference number: 5 (lower is better)
Translates to: NNVHNVTRELAALSAGFRGTLPC*CCRILP
Trigger: TGGAAGTATTCTGCAACACAAGCATGGAAGCGTCCC...CCTGAACCCAGCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGCACGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGCCTTTCACACTCTCCTaGGGGGCTACTTCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMPFTLS*GATSAL
Trigger: GAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGG...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCGATGATAGACGCTTCTaGGCAATAGGGATTAAGGCC +
Preference number: 5 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSDDRRF*AIGIKA
Trigger: GGCCTTAATCCCTATTGCCAAGAAGCGTCTATCATC...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGATCTGCTGGTGGTGTaGGTTTCATCCGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWDLLVV*VSSAFL
Trigger: CAGAAAGGCGGATGAAACCAACACCACCAGCAGATC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS GCA 90 bp TCACCTTGGGAACTGTTTCCAGGTCCACCTTCGGGAGTGCTTCTATaGTCAACTCGGGGGATGCGTCCATGCTCATCTCAGAATCATATG +
Preference number: 5 (lower is better)
Translates to: SPWELFPGPPSGVLL*STRGMRPCSSQNHM
Trigger: CATATGATTCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGACCTGGAAACAGTTCCCAAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp TCTGCTGGTAGAGGCCAGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGGAGACTCTTCTACTTTaGTTTGAGGAGGTATTTTCA +
Preference number: 5 (lower is better)
Translates to: SAGRGQGSVPPGRGYQEGETLLL*FEEVFS
Trigger: TGAAAATACCTCCTCAAACAAAAGTAGAAGAGTCTC...CCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCTGGCCTCTACCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGGCATCCACACTTGCCTaGGGAGGTGTCTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWASTLA*GGVSTF
Trigger: GAAAGTAGAGACACCTCCCAAGGCAAGTGTGGATGC...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTGGGGTGCATCCACACTaGCCTTGGGAGGTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: TRTHWQPVARERQANFGCGVHPH*PWEVSL
Trigger: TAGAGACACCTCCCAAGGCAAGTGTGGATGCACCCC...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAACTTCTGCGCTCCCCTaGGGAGGTGCTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ISSLSVYSTTELESTGRKTSALP*GGASRL
Trigger: GAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAGT...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGGCCTCCATGCTCTCCTaGGGTGACCCTTTCACACTC +
Preference number: 5 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRASMLS*GDPFTL
Trigger: GAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGC...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGAGCGTCTCTCGCTTTaGCCTTGGGAGATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMERLSL*PWEMLP
Trigger: TGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTC...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGGGGTCTGTCCCTCCGGGTAGAGGATACCAGGAAGGGAAATGCGAGGCAGCAACTCCAACTGCTTCCTTaGCCATGTCTTTTGATTTCT +
Preference number: 5 (lower is better)
Translates to: RGLSLRVEDTRKGNARQQLQLLP*PCLLIS
Trigger: AGAAATCAAAAGACATGGCAAAGGAAGCAGTTGGAG...TTGCTGCCTCGCATTTCCCTTCCTGGTATCCTCTACCCGGAGGGACAGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCAAGTGGTCTTCTGCTaGGCCTCCAACTGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: GLPAFQVISACVLTGTDGQVVFC*ASNCFL
Trigger: AAGGAAGCAGTTGGAGGCCAAGCAGAAGACCACTTG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAACGGCATTTTAAATTaGGTAGGTGAGCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSNGILN*VGEPVP
Trigger: TGGCACAGGCTCACCTACCAAATTTAAAATGCCGTT...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGCTGAGACAGGAGAATaGCTTGAGATGAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMAETGE*LEMRRR
Trigger: CCGCCTCCTCATCTCAAGCAATTCTCCTGTCTCAGC...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTAGACGGGTGGATCTCTaGAGGCCAGGATTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIRRVDL*RPGFRD
Trigger: GTCTCGAAATCCTGGCCTCAAGAGATCCACCCGTCT...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS GCA 90 bp ATTTCTTTGGAGCGTCTCTCGCTTTTGCCTTGGGAGATGCTTCCATaGTTGCTTCAAGGGATGTCTTGGGGGATGCTTTCACCATCGCCT +
Preference number: 5 (lower is better)
Translates to: ISLERLSLLPWEMLP*LLQGMSWGMLSPSP
Trigger: AGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTCCAAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp GGATACCAGGAAGGGAAATGCGAGGCAGCAATGCGTGAGGGGAAAGCTAGGTCATTCTTTATTGGCGTCTaGCTGTCTCCTTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: GYQEGKCEAAMREGKARSFFIGV*LSPFLL
Trigger: GAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGAA...TGACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATTTCCCTTCCTGGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGCAGTTCTTTTGGATTaGCCTGTTAGTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWAVLLD*PVSADG
Trigger: CCCATCAGCACTAACAGGCAAATCCAAAAGAACTGC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCATTCTGTCAAAATTTTaGTTGCCGCCTCGGCATTCA +
Preference number: 5 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSILSKF*LPPRHS
Trigger: TGAATGCCGAGGCGGCAACAAAAATTTTGACAGAAT...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGCTCTCGTGTTCTTTCTaGCGTTTGTCAGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWLSCSF*RLSASS
Trigger: AGAGGAAGCTGACAAACGCAAGAAAGAACACGAGAG...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGATACCAGGAAGGGAAATGCGAGGCAGCAATGCGTGAGGGGAAAGCTAGGTCATCCTTCAGATTTTGTTaGTGCAGAGGATCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: GYQEGKCEAAMREGKARSSFRFC*CRGSAG
Trigger: ACCAGCAGATCCTCTGCACAAACAAAATCTGAAGGA...TGACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATTTCCCTTCCTGGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGCCTCTCTGCGCTCTCTaGCTAATCTTTGTTTTATGT +
Preference number: 5 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKPLCAL*LIFVLC
Trigger: ACATAAAACAAAGATTAGCAAGAGAGCGCAGAGAGG...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACAGGGGTGCATCCACACTaGCCTTGGGAGGTGTCTCTA +
Preference number: 5 (lower is better)
Translates to: PSPVRRKISTLQNPMWETGVHPH*PWEVSL
Trigger: TAGAGACACCTCCCAAGGCAAGTGTGGATGCACCCC...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGCTTCCATGCTTGTGTaGCAGAATACTTCCACATTC +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWASMLV*QNTSTF
Trigger: GAATGTGGAAGTATTCTGCAACACAAGCATGGAAGC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGCCTCCATGCTCTCCTaGGGTGACCCTTTCACACTC +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHASMLS*GDPFTL
Trigger: GAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCGGGATTAAGGCCTGTTaGTCCATTTCTGATTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLGHRCCFMPPDPSCSGSGIKAC*SISDFF
Trigger: AAAGAAATCAGAAATGGACAAACAGGCCTTAATCCC...GGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGATGGAGGGCAGTTCTTTaGGATTTGCCTGTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRWRAVL*DLPVSA
Trigger: AGCACTAACAGGCAAATCCAAAAGAACTGCCCTCCA...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTTCCTCTTTTTCTCTTaGTTCACGAGCAAGGCGGCG +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMFLFFS*FTSKAA
Trigger: CGCCGCCTTGCTCGTGAACAAAGAGAAAAAGAGGAA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGAACATCCTGGTAGACAGTTTCAATGGATGGATCAACAGGACCTGGCGCCAAGGTGTCTGAGGACTTaGGCAAGATGTCATGGAATC +
Preference number: 5 (lower is better)
Translates to: QEHPGRQFQWMDQQDLAPRCLRT*ARCHGI
Trigger: GATTCCATGACATCTTGCCAAAGTCCTCAGACACCT...TGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGCGATCCTGCGGCCCTaGCATAATCTATTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMAILRP*HNLFCS
Trigger: AGAACAGAATAGATTATGCAAGGGCCGCAGGATCGC...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGAGACCTGGCGCCAGACTaGGCAGTGAAGAGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRDLAPD*AVKSFQ
Trigger: CTGGAAACTCTTCACTGCCAAGTCTGGCGCCAGGTC...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGAGTGTGGGGTGTTAGTTaGAGGGACAAACTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRVWGVS*RDKLGF
Trigger: AAACCCAAGTTTGTCCCTCAAACTAACACCCCACAC...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS CCA 90 bp GTTTGTCCATTTCTGATTTCTTTGGAGCGTCTCTCGCTTTTGCCTTaGGAGATGCTTCCATGCTTGCTTCAAGGGATGTCTTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: VCPFLISLERLSLLP*EMLPCLLQGMSWGM
Trigger: CATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTCCAAAGAAATCAGAAATGGACAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGCCTCTCTGCGCTCTCTaGCTAATCTTTGTTTTATGT +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWPLCAL*LIFVLC
Trigger: ACATAAAACAAAGATTAGCAAGAGAGCGCAGAGAGG...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGATGAGCTTCTCTCCTaGTCTGTTTTCCTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: GLPAFQVISACVLTGTDGDELLS*SVFLLA
Trigger: TGCCAAAAGGAAAACAGACAAGGAGAGAAGCTCATC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGGGACGCTTCCATGCTaGTGTTGCAGAATACTTCCA +
Preference number: 5 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVGTLPC*CCRILP
Trigger: TGGAAGTATTCTGCAACACAAGCATGGAAGCGTCCC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCCATTTCTGATTTCTTaGGAGCGTCTCTCGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GLPAFQVISACVLTGTDGPFLIS*ERLSLL
Trigger: CAAAAGCGAGAGACGCTCCAAAGAAATCAGAAATGG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTGATGATAGACGCTTCTaGGCAATAGGGATTAAGGCC +
Preference number: 5 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIDDRRF*AIGIKA
Trigger: GGCCTTAATCCCTATTGCCAAGAAGCGTCTATCATC...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGTCATTCAATGAGTCCTaGTCGCTTTCTTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWSFNES*SLSSLS
Trigger: TGACAACGAAGAAAGCGACAAGGACTCATTGAATGA...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGATACCAGGAAGGGAAATGCGAGGCAGCAATGCGTGAGGGGAAAGCTAGGTCATCTAGAAATACCAGCTaGTGTGTCATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GYQEGKCEAAMREGKARSSRNTS*CVIFLA
Trigger: TGCCAAGAAAATGACACACAAGCTGGTATTTCTAGA...TGACCTAGCTTTCCCCTCACGCATTGCTGCCTCGCATTTCCCTTCCTGGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGCCTTTCTGGTTTTCGTaGTGTGACTGGTCATTCTTT +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWPFWFS*CDWSFF
Trigger: AAAGAATGACCAGTCACACAACGAAAACCAGAAAGG...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCAGAAGCAGAAAAATTaGAGGACTGATGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TRTHWQPVARERQANFGCQKQKN*RTDGPR
Trigger: CCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCTG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTTCAGGAAAGCATCCTaGATGCACTCACTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMFRKAS*MHSLQQ
Trigger: TTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGCTGAGACAGGAGAATaGCTTGAGATGAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHAETGE*LEMRRR
Trigger: CCGCCTCCTCATCTCAAGCAATTCTCCTGTCTCAGC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGAACATCCTGGTAGACAGTTTCAATGGATGGATCAACAGGACCTGGCGCCAGATGAGCTTCTCTCCTaGTCTGTTTTCCCAGTTTTG +
Preference number: 5 (lower is better)
Translates to: QEHPGRQFQWMDQQDLAPDELLS*SVFPVL
Trigger: CAAAACTGGGAAAACAGACAAGGAGAGAAGCTCATC...TGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTGCACAGCCCCCTCATTaGACAGACAAGGAACAGGGA +
Preference number: 5 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFAQPPH*TDKEQG
Trigger: TCCCTGTTCCTTGTCTGTCAAATGAGGGGGCTGTGC...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AACAACGTGCACAATGTCACACGTGAGCTAGCAGCCCTCTCAGCTGGGTTCAGGTGCCTATCAAGTACCTaGCATATTGCACATGTAAAC +
Preference number: 5 (lower is better)
Translates to: NNVHNVTRELAALSAGFRCLSST*HIAHVN
Trigger: GTTTACATGTGCAATATGCAAGGTACTTGATAGGCA...CCTGAACCCAGCTGAGAGGGCTGCTAGCTCACGTGTGACATTGTGCACGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AGAGTTTCCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGCAAGAACCTCTCTGCTaGTGGTTAACAGGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: RVSSSDETQGGMGFPNEEQEPLC*WLTGWA
Trigger: AGCCCACCCTGTTAACCACAAGCAGAGAGGTTCTTG...CTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGGAAACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTACGATTAACCACATCTaGCTTCCTCCTTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: SMKGADCSKMGLYRTPSITINHI*LPPFLS
Trigger: GCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCGT...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTTCTTTATTGGCGTCTaGCTGTCTCCTTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SMKGADCSKMGLYRTPSIFFIGV*LSPFLL
Trigger: GAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGAA...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGTGCAGCTATTCTCCGTaGTTCTTCTTTCTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: GLPAFQVISACVLTGTDGCSYSP*FFFLFS
Trigger: CGAAAAGAGAAAGAAGAACAACGGAGAATAGCTGCA...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGAACATCCTGGTAGACAGTTTCAATGGATGGATCAACAGGACCTGGCGCCATGCAGCTATTCTCCGTaGTTCTTCTTTCTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: QEHPGRQFQWMDQQDLAPCSYSP*FFFLFS
Trigger: CGAAAAGAGAAAGAAGAACAACGGAGAATAGCTGCA...TGGCGCCAGGTCCTGTTGATCCATCCATTGAAACTGTCTACCAGGATGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGCGTTTATTGGCAGTTTaGCTCTCAGAATTCGCCATT +
Preference number: 5 (lower is better)
Translates to: GLPAFQVISACVLTGTDGRLLAV*LSEFAI
Trigger: AATGGCGAATTCTGAGAGCAAAACTGCCAATAAACG...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGCATCCACACTTGCCTaGGGAGGTGTCTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: ISSLSVYSTTELESTGRKASTLA*GGVSTF
Trigger: GAAAGTAGAGACACCTCCCAAGGCAAGTGTGGATGC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGCTACTATGCTCACCTaGGGAACTGTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFATMLT*GTVSRS
Trigger: GGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAGC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGGGCCTGTCTGGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTGCTTCAAGGGATGTCTaGGGGGATGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: QGPVWHSLWYFTLHSCGFASRDV*GDAFTI
Trigger: GATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGC...AAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCCAGACAGGCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGCTTCAAGGGATGTCTaGGGGGATGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFASRDV*GDAFTI
Trigger: GATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGCCATTTCTGATTTCTTaGGAGCGTCTCTCGCTTTTG +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMPFLIS*ERLSLL
Trigger: CAAAAGCGAGAGACGCTCCAAAGAAATCAGAAATGG...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACATCTGTGTGCATTTCTGTGTGCCCATCACACGAACTCACTGGCAGCCAGTGGGGGATTAAGGCCTGTTaGTCCATTTCTGATTTCTTT +
Preference number: 5 (lower is better)
Translates to: TSVCISVCPSHELTGSQWGIKAC*SISDFF
Trigger: AAAGAAATCAGAAATGGACAAACAGGCCTTAATCCC...CCACTGGCTGCCAGTGAGTTCGTGTGATGGGCACACAGAAATGCACACAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGGATGATAGACGCTTCTaGGCAATAGGGATTAAGGCC +
Preference number: 5 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVDDRRF*AIGIKA
Trigger: GGCCTTAATCCCTATTGCCAAGAAGCGTCTATCATC...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTGCAGTTCTTTTGGATTaGCCTGTTAGTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: TRTHWQPVARERQANFGCAVLLD*PVSADG
Trigger: CCCATCAGCACTAACAGGCAAATCCAAAAGAACTGC...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCAAGCACAGACAGGGTGTGTaGAATAGGCATTATTTTATA +
Preference number: 5 (lower is better)
Translates to: LGHRCCFMPPDPSCSGSKHRQGV*NRHYFI
Trigger: TATAAAATAATGCCTATTCAACACACCCTGTCTGTG...CTTGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCAAGTGGTCTTCTGCTaGGCCTCCAACTGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHQVVFC*ASNCFL
Trigger: AAGGAAGCAGTTGGAGGCCAAGCAGAAGACCACTTG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTGTTGCTGCCCATCTTaGAGTTTCAAGTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SMKGADCSKMGLYRTPSICCCPS*SFKWSS
Trigger: AGAAGACCACTTGAAACTCAAAGATGGGCAGCAACA...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TCCTTGGCCATCGCTGCTGTTTTATGCCTCCTGATCCCTCTTGCTCTGGCTCCATTTTGGAAGATGGTCTaGAAACTACTTCCTGTATTG +
Preference number: 5 (lower is better)
Translates to: SLAIAAVLCLLIPLALAPFWKMV*KLLPVL
Trigger: CAATACAGGAAGTAGTTTCAAGACCATCTTCCAAAA...TGGAGCCAGAGCAAGAGGGATCAGGAGGCATAAAACAGCAGCGATGGCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGATCTGCTGGTGGTGTaGGTTTCATCCGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHDLLVV*VSSAFL
Trigger: CAGAAAGGCGGATGAAACCAACACCACCAGCAGATC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTCCTTCAGATTTTGTTaGTGCAGAGGATCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMSFRFC*CRGSAG
Trigger: ACCAGCAGATCCTCTGCACAAACAAAATCTGAAGGA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTTCAGGAAAGCATCCTaGATGCACTCACTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVFRKAS*MHSLQQ
Trigger: TTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAA...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGTCTGTTTTCCCAGTTTaGCTCTCAGAATTCGCCATT +
Preference number: 5 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWSVFPV*LSEFAI
Trigger: AATGGCGAATTCTGAGAGCAAAACTGGGAAAACAGA...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS CCA 90 bp TTTGTGCAGAGGATCTGCTGGTGGTGTTGGTTTCATCCGCCTTTCTaGTTTTCGTTGTGTGACTGGTCATTCTTTTGGAAGATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: FVQRICWWCWFHPPF*FSLCDWSFFWKMVL
Trigger: CAAGACCATCTTCCAAAAGAATGACCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACACCACCAGCAGATCCTCTGCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS-3UTR CAA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAAGGGACGCTTCCATGCTaGTGTTGCAGAATACTTCCA +
Preference number: 5 (lower is better)
Translates to: ISSLSVYSTTELESTGRKGTLPC*CCRILP
Trigger: TGGAAGTATTCTGCAACACAAGCATGGAAGCGTCCC...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGAGATGCTTCCATGCTaGCTTCAAGGGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFEMLPC*LQGMSW
Trigger: CCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TGCTTAGTGAGGGGACTGGCACCCAGTAAACACACTAAATGCCAACAAACATTTTCTCTCGCTTTTGCCTaGGGAGATGCTTCCATGCTT +
Preference number: 5 (lower is better)
Translates to: CLVRGLAPSKHTKCQQTFSLAFA*GDASML
Trigger: AAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGA...AAATGTTTGTTGGCATTTAGTGTGTTTACTGGGTGCCAGTCCCCTCACTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTCTCTCGCTTTTGCCTaGGGAGATGCTTCCATGCTT +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHSLAFA*GDASML
Trigger: AAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGATTCTGTCAAAATTTTaGTTGCCGCCTCGGCATTCA +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMILSKF*LPPRHS
Trigger: TGAATGCCGAGGCGGCAACAAAAATTTTGACAGAAT...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTTCCTCTTTTTCTCTTaGTTCACGAGCAAGGCGGCG +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHFLFFS*FTSKAA
Trigger: CGCCGCCTTGCTCGTGAACAAAGAGAAAAAGAGGAA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTCTCCAACTGCTTCCTTaGCCATGTCTTTTGATTTCT +
Preference number: 5 (lower is better)
Translates to: SMKGADCSKMGLYRTPSILQLLP*PCLLIS
Trigger: AGAAATCAAAAGACATGGCAAAGGAAGCAGTTGGAG...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGATTGTGTGTCATTTTCTaGGCATTGTTGAACGGCATT +
Preference number: 5 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRLCVIF*ALLNGI
Trigger: AATGCCGTTCAACAATGCCAAGAAAATGACACACAA...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTGGAATCCTTCAGATTTaGTTTGTGCAGAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: TRTHWQPVARERQANFGCGILQI*FVQRIC
Trigger: GCAGATCCTCTGCACAAACAAAATCTGAAGGATTCC...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCAGAAGCAGAAAAATTaGAGGACTGATGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHQKQKN*RTDGPR
Trigger: CCTGGGCCCATCAGTCCTCAAATTTTTCTGCTTCTG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTACTCCAGCAAACACATaGGTGGGACAACACAAGAAT +
Preference number: 5 (lower is better)
Translates to: TRTHWQPVARERQANFGCTPANT*VGQHKN
Trigger: ATTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAGT...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGCAAGCAAATTTTGGTaGTATCTCAAGCCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMASKFW*YLKPEC
Trigger: ACACTCAGGCTTGAGATACAACCAAAATTTGCTTGC...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGACTGTGGTTTCACACTGCATTCTaGTGGTTTTTAGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: LPGFKSWLLCHFVVMRLWFHTAF*WFLGIG
Trigger: TCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAA...CCACAGTCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTCATGTCTCACTTGGTaGATGGCAGCCTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFSCLTW*MAAFSA
Trigger: AGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS TCA 90 bp CTGCTGGTGGTGTTGGTTTCATCCGCCTTTCTGGTTTTCGTTGTGTaGCTGGTCATTCTTTTGGAAGATGGTCTTGAAACTACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LLVVLVSSAFLVFVV*LVILLEDGLETTSC
Trigger: ACAGGAAGTAGTTTCAAGACCATCTTCCAAAAGAATGACCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACACCACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS-3UTR CAA 90 bp ACCAGGCTACCAGGGTTCAAATCCTGGCTGCTCTGCCACTTTGTAGTCATGAGATGTAAATTTTTCCTTTaGTGCTTCATCCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: TRLPGFKSWLLCHFVVMRCKFFL*CFILLV
Trigger: CACCAGAAGGATGAAGCACAAAAGGAAAAATTTACA...TCTCATGACTACAAAGTGGCAGAGCAGCCAGGATTTGAACCCTGGTAGCCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTCTCAGAATTCGCCATaGCAGAGCCTCCCCATGACC +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFSQNSP*QSLPMT
Trigger: GGTCATGGGGAGGCTCTGCAATGGCGAATTCTGAGA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGCGTTTATTGGCAGTTTaGCTCTCAGAATTCGCCATT +
Preference number: 5 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVRLLAV*LSEFAI
Trigger: AATGGCGAATTCTGAGAGCAAAACTGCCAATAAACG...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGGAGACTCTTCTACTTTaGTTTGAGGAGGTATTTTCA +
Preference number: 5 (lower is better)
Translates to: GLPAFQVISACVLTGTDGETLLL*FEEVFS
Trigger: TGAAAATACCTCCTCAAACAAAAGTAGAAGAGTCTC...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCAGAGATGCTTCCATGCTaGCTTCAAGGGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSEMLPC*LQGMSW
Trigger: CCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTC...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGATAGATCATATGCCTTaGGCTCAAAGCCTCACATCT +
Preference number: 5 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRIDHMP*AQSLTS
Trigger: AGATGTGAGGCTTTGAGCCAAAGGCATATGATCTAT...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCATTCCTCTTTTTCTCTTaGTTCACGAGCAAGGCGGCG +
Preference number: 5 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSFLFFS*FTSKAA
Trigger: CGCCGCCTTGCTCGTGAACAAAGAGAAAAAGAGGAA...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACACGAACTCACTGGCAGCCAGTGGCTAGAGAAAGGCAAGCAAATTTTGGTTGTCTCCAACTGCTTCCTTaGCCATGTCTTTTGATTTCT +
Preference number: 5 (lower is better)
Translates to: TRTHWQPVARERQANFGCLQLLP*PCLLIS
Trigger: AGAAATCAAAAGACATGGCAAAGGAAGCAGTTGGAG...ACAACCAAAATTTGCTTGCCTTTCTCTAGCCACTGGCTGCCAGTGAGTTCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGTTGTGTGTCATTTTCTaGGCATTGTTGAACGGCATT +
Preference number: 5 (lower is better)
Translates to: QDSQHFRLLVPVYSLAQMLCVIF*ALLNGI
Trigger: AATGCCGTTCAACAATGCCAAGAAAATGACACACAA...CATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTACTCACTGGCACAGATGGGTTTTGGAAGATGGTCTaGAAACTACTTCCTGTATTG +
Preference number: 5 (lower is better)
Translates to: GLPAFQVISACVLTGTDGFWKMV*KLLPVL
Trigger: CAATACAGGAAGTAGTTTCAAGACCATCTTCCAAAA...CCCATCTGTGCCAGTGAGTACACAGGCACTAATAACCTGAAATGCTGGGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS GCA 90 bp TCTTTGTTCACGAGCAAGGCGGCGCAATTCTGTCAAAATTTTTGTTaGCGCCTCGGCATTCATAATACCTGCAGTACTCTTATTACCAGA +
Preference number: 5 (lower is better)
Translates to: SLFTSKAAQFCQNFC*RLGIHNTCSTLITR
Trigger: TCTGGTAATAAGAGTACTGCAGGTATTATGAATGCCGAGGCGGCAACAAAAATTTTGACAGAATTGCGCCGCCTTGCTCGTGAACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000495432.1
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTACGATTAACCACATCTaGCTTCCTCCTTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFTINHI*LPPFLS
Trigger: GCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCGT...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGATGTCGATCTTATATTaGAGGAATGGGTTGCAACAC +
Preference number: 5 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRMSILY*RNGLQH
Trigger: GTGTTGCAACCCATTCCTCAAATATAAGATCGACAT...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AGCATGAAAGGTGCTGACTGTTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTGTAAATTTTTCCTTTaGTGCTTCATCCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SMKGADCSKMGLYRTPSICKFFL*CFILLV
Trigger: CACCAGAAGGATGAAGCACAAAAGGAAAAATTTACA...AATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAACAGTCAGCACCTTTCATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTGCATCCACACTTGCCTaGGGAGGTGTCTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFASTLA*GGVSTF
Trigger: GAAAGTAGAGACACCTCCCAAGGCAAGTGTGGATGC...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACAGCTTCCATGCTTGTGTaGCAGAATACTTCCACATTC +
Preference number: 5 (lower is better)
Translates to: PSPVRRKISTLQNPMWETASMLV*QNTSTF
Trigger: GAATGTGGAAGTATTCTGCAACACAAGCATGGAAGC...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATCCTTTCACACTCTCCTaGGGGGCTACTTCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDPFTLS*GATSAL
Trigger: GAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGG...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCCCTTTCACACTCTCCTaGGGGGCTACTTCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGPFTLS*GATSAL
Trigger: GAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGG...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGCCTCCATGCTCTCCTaGGGTGACCCTTTCACACTC +
Preference number: 5 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGASMLS*GDPFTL
Trigger: GAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCGCTTCAAGGGATGTCTaGGGGGATGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: FCNQILLETPQLQFQESIASRDV*GDAFTI
Trigger: GATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGC...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACACCATTTCTGATTTCTTaGGAGCGTCTCTCGCTTTTG +
Preference number: 5 (lower is better)
Translates to: PSPVRRKISTLQNPMWETPFLIS*ERLSLL
Trigger: CAAAAGCGAGAGACGCTCCAAAGAAATCAGAAATGG...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTGTTGCTGCCCATCTTaGAGTTTCAAGTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHCCCPS*SFKWSS
Trigger: AGAAGACCACTTGAAACTCAAAGATGGGCAGCAACA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTCCTTCAGATTTTGTTaGTGCAGAGGATCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHSFRFC*CRGSAG
Trigger: ACCAGCAGATCCTCTGCACAAACAAAATCTGAAGGA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGAGGAATCCTTCAGATTTaGTTTGTGCAGAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRGILQI*FVQRIC
Trigger: GCAGATCCTCTGCACAAACAAAATCTGAAGGATTCC...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTCTGGTCATGTCTCACTaGGTTGATGGCAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFLVMSH*VDGSLL
Trigger: GAGAAGGCTGCCATCAACCAAGTGAGACATGACCAG...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTCCTCTCTGCGCTCTCTaGCTAATCTTTGTTTTATGT +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFPLCAL*LIFVLC
Trigger: ACATAAAACAAAGATTAGCAAGAGAGCGCAGAGAGG...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ATCTCAAGCCTGAGTGTATACTCAACGACAGAACTGGAGAGTACAGGCAGAAAATGCAGCTATTCTCCGTaGTTCTTCTTTCTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: ISSLSVYSTTELESTGRKCSYSP*FFFLFS
Trigger: CGAAAAGAGAAAGAAGAACAACGGAGAATAGCTGCA...TTTTCTGCCTGTACTCTCCAGTTCTGTCGTTGAGTATACACTCAGGCTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTCTCTCGCTTTTGCCTaGGGAGATGCTTCCATGCTT +
Preference number: 5 (lower is better)
Translates to: FCNQILLETPQLQFQESISLAFA*GDASML
Trigger: AAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTTTCTTAATGACCCTTaGCTGCATTTCTTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHFLNDP*LHFFPL
Trigger: CAACGGGAAGAAATGCAGCAAAGGGTCATTAAGAAA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CCAGCTCAGATGAGACACAAGGAGGAATGGGATTTCCAAATGAGGAGAAACAGGTTTAGTCTCATTTTGTaGCTGCCCATCTTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: PAQMRHKEEWDFQMRRNRFSLIL*LPIFEF
Trigger: AAACTCAAAGATGGGCAGCAACAAAATGAGACTAAA...CCTGTTTCTCCTCATTTGGAAATCCCATTCCTCCTTGTGTCTCATCTGAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATCCCATGTGGGAGACATTTGTCAGCTTCCTCTaGAGCTTTTATTTTGGCGTC +
Preference number: 5 (lower is better)
Translates to: PSPVRRKISTLQNPMWETFVSFL*SFYFGV
Trigger: GACGCCAAAATAAAAGCTCAAGAGGAAGCTGACAAA...TGTCTCCCACATGGGATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTTTTGTCAGCTTCCTCTaGAGCTTTTATTTTGGCGTC +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFFVSFL*SFYFGV
Trigger: GACGCCAAAATAAAAGCTCAAGAGGAAGCTGACAAA...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCCTCTCGTGTTCTTTCTaGCGTTTGTCAGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCLSCSF*RLSASS
Trigger: AGAGGAAGCTGACAAACGCAAGAAAGAACACGAGAG...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTGTCGCTTTCTTCGTaGTCAGCCTCAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSLSLSS*SASASS
Trigger: TGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAA...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTTGTCGCTTTCTTCGTaGTCAGCCTCAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFLSLSS*SASASS
Trigger: TGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATTCATTCAATGAGTCCTaGTCGCTTTCTTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHSFNES*SLSSLS
Trigger: TGACAACGAAGAAAGCGACAAGGACTCATTGAATGA...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGATCATTCAATGAGTCCTaGTCGCTTTCTTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRSFNES*SLSSLS
Trigger: TGACAACGAAGAAAGCGACAAGGACTCATTGAATGA...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TTCCAAGATGGGGCTTTACAGGACTCCCAGCATTTCAGGTTATTAGTGCCTGTGTTTTGGAAGATGGTCTaGAAACTACTTCCTGTATTG +
Preference number: 5 (lower is better)
Translates to: FQDGALQDSQHFRLLVPVFWKMV*KLLPVL
Trigger: CAATACAGGAAGTAGTTTCAAGACCATCTTCCAAAA...CACAGGCACTAATAACCTGAAATGCTGGGAGTCCTGTAAAGCCCCATCTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCCTTTCTGGTTTTCGTaGTGTGACTGGTCATTCTTT +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHPFWFS*CDWSFF
Trigger: AAAGAATGACCAGTCACACAACGAAAACCAGAAAGG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAGCGATCCTGCGGCCCTaGCATAATCTATTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRAILRP*HNLFCS
Trigger: AGAACAGAATAGATTATGCAAGGGCCGCAGGATCGC...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGCAAGCAAATTTTGGTaGTATCTCAAGCCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHASKFW*YLKPEC
Trigger: ACACTCAGGCTTGAGATACAACCAAAATTTGCTTGC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GAGTTAGAGGTGTTTGAGAACAGTGGAGTCTCAAAACTGAAAAGGCTGCAGAGAGAAAATGACAGGGAATaGCCCCCTGACATGATAAAA +
Preference number: 5 (lower is better)
Translates to: ELEVFENSGVSKLKRLQRENDRE*PPDMIK
Trigger: TTTTATCATGTCAGGGGGCAATTCCCTGTCATTTTC...TCTCTGCAGCCTTTTCAGTTTTGAGACTCCACTGTTCTCAAACACCTCTAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CTCTCTGAGCTTGATCCTTCACCTGTGAGACGTAAAATTTCTACTTTGCAGAATACGATTAACCACATCTaGCTTCCTCCTTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: LSELDPSPVRRKISTLQNTINHI*LPPFLS
Trigger: GCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCGT...ATTCTGCAAAGTAGAAATTTTACGTCTCACAGGTGAAGGATCAAGCTCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATGCTACTATGCTCACCTaGGGAACTGTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDATMLT*GTVSRS
Trigger: GGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAGC...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGCTACTATGCTCACCTaGGGAACTGTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGATMLT*GTVSRS
Trigger: GGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAGC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATGGGATTAAGGCCTGTTaGTCCATTTCTGATTTCTTT +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHGIKAC*SISDFF
Trigger: AAAGAAATCAGAAATGGACAAACAGGCCTTAATCCC...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGATGGAGGGCAGTTCTTTaGGATTTGCCTGTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRWRAVL*DLPVSA
Trigger: AGCACTAACAGGCAAATCCAAAAGAACTGCCCTCCA...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTGGAGGGCAGTTCTTTaGGATTTGCCTGTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFWRAVL*DLPVSA
Trigger: AGCACTAACAGGCAAATCCAAAAGAACTGCCCTCCA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp GGCATTCTTTATGGTATTTCACACTGCATTCTTGTGGTTTTTAGGGATTGGAGCTGTTGCTGCCCATCTTaGAGTTTCAAGTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GILYGISHCILVVFRDWSCCCPS*SFKWSS
Trigger: AGAAGACCACTTGAAACTCAAAGATGGGCAGCAACA...GCTCCAATCCCTAAAAACCACAAGAATGCAGTGTGAAATACCATAAAGAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp CACAGTTACAGTTTCAGGAAAGCATCCTTGATGCACTCACTCCAGCAAACACATCTTTTTAGTCTCATTTaGTTGCTGCCCATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: HSYSFRKASLMHSLQQTHLFSLI*LLPIFE
Trigger: CTCAAAGATGGGCAGCAACAAAATGAGACTAAAAAG...ATGTGTTTGCTGGAGTGAGTGCATCAAGGATGCTTTCCTGAAACTGTAACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGACTCTCGTGTTCTTTCTaGCGTTTGTCAGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRLSCSF*RLSASS
Trigger: AGAGGAAGCTGACAAACGCAAGAAAGAACACGAGAG...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCACCTTTCTGGTTTTCGTaGTGTGACTGGTCATTCTTT +
Preference number: 5 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSPFWFS*CDWSFF
Trigger: AAAGAATGACCAGTCACACAACGAAAACCAGAAAGG...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCAGGTGTCTGAGGACTTaGGCAAGATGTCATGGAATC +
Preference number: 5 (lower is better)
Translates to: FCNQILLETPQLQFQESIRCLRT*ARCHGI
Trigger: GATTCCATGACATCTTGCCAAAGTCCTCAGACACCT...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCGGGACAAACTTGGGTTaGAATATCAGCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCGTNLG*NISSVS
Trigger: AGAGACAGAGCTGATATTCAAACCCAAGTTTGTCCC...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGATTCTTTATTGGCGTCTaGCTGTCTCCTTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRFFIGV*LSPFLL
Trigger: GAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGAA...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTGATGAGCTTCTCTCCTaGTCTGTTTTCCTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFDELLS*SVFLLA
Trigger: TGCCAAAAGGAAAACAGACAAGGAGAGAAGCTCATC...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTACTAATCCAAGACTGGCAGCCAAAAGGAACACTGGCCTGCTTCAGACTATTTGAGACTCTTCTACTTTaGTTTGAGGAGGTATTTTCA +
Preference number: 5 (lower is better)
Translates to: LLIQDWQPKGTLACFRLFETLLL*FEEVFS
Trigger: TGAAAATACCTCCTCAAACAAAAGTAGAAGAGTCTC...AAATAGTCTGAAGCAGGCCAGTGTTCCTTTTGGCTGCCAGTCTTGGATTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAGCTTCCATGCTTGTGTaGCAGAATACTTCCACATTC +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRASMLV*QNTSTF
Trigger: GAATGTGGAAGTATTCTGCAACACAAGCATGGAAGC...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCGAGATGCTTCCATGCTaGCTTCAAGGGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGEMLPC*LQGMSW
Trigger: CCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTC...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTAAACACACTAAATGCCAACAAACATTTCATTCCCAGCACCAAAGACACTGCTTTCTTAATGACCCTTaGCTGCATTTCTTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: SKHTKCQQTFHSQHQRHCFLNDP*LHFFPL
Trigger: CAACGGGAAGAAATGCAGCAAAGGGTCATTAAGAAA...GCAGTGTCTTTGGTGCTGGGAATGAAATGTTTGTTGGCATTTAGTGTGTTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp ACACCCCTAAGGCTCAGGAGAAATGAGGGTAAATTTCCCCTTAACAATTTGTCACTTTTTAGTCTCATTTaGTTGCTGCCCATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: TPLRLRRNEGKFPLNNLSLFSLI*LLPIFE
Trigger: CTCAAAGATGGGCAGCAACAAAATGAGACTAAAAAG...TGACAAATTGTTAAGGGGAAATTTACCCTCATTTCTCCTGAGCCTTAGGGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATTTGTCGCTTTCTTCGTaGTCAGCCTCAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDLSLSS*SASASS
Trigger: TGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAA...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAAACGGCATTTTAAATTaGGTAGGTGAGCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRNGILN*VGEPVP
Trigger: TGGCACAGGCTCACCTACCAAATTTAAAATGCCGTT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCAACGGCATTTTAAATTaGGTAGGTGAGCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSNGILN*VGEPVP
Trigger: TGGCACAGGCTCACCTACCAAATTTAAAATGCCGTT...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCGGAATCCTTCAGATTTaGTTTGTGCAGAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSGILQI*FVQRIC
Trigger: GCAGATCCTCTGCACAAACAAAATCTGAAGGATTCC...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTACTCCAGCAAACACATaGGTGGGACAACACAAGAAT +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFTPANT*VGQHKN
Trigger: ATTCTTGTGTTGTCCCACCAATGTGTTTGCTGGAGT...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS TCA 90 bp AAGCATGGATCCATCGATTACTGGTTTAAATGTCGATCTTATATTTaGGGAATGGGTTGCAACACGATTAACCACATCTTGCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: KHGSIDYWFKCRSYI*GMGCNTINHILLPP
Trigger: AGGAGGAAGCAAGATGTGGTTAATCGTGTTGCAACCCATTCCTCAAATATAAGATCGACATTTAAACCAGTAATCGATGGATCCATGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp AAAATGCCTATCAAGTACCTTGCATATTGCACATGTAAACCTAACTGCAATGATGCAGTTCTTTTGGATTaGCCTGTTAGTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: KMPIKYLAYCTCKPNCNDAVLLD*PVSADG
Trigger: CCCATCAGCACTAACAGGCAAATCCAAAAGAACTGC...ATCATTGCAGTTAGGTTTACATGTGCAATATGCAAGGTACTTGATAGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGAATAGATCATATGCCTTaGGCTCAAAGCCTCACATCT +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRIDHMP*AQSLTS
Trigger: AGATGTGAGGCTTTGAGCCAAAGGCATATGATCTAT...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTATAGATCATATGCCTTaGGCTCAAAGCCTCACATCT +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFIDHMP*AQSLTS
Trigger: AGATGTGAGGCTTTGAGCCAAAGGCATATGATCTAT...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTATTCTGTCAAAATTTTaGTTGCCGCCTCGGCATTCA +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFILSKF*LPPRHS
Trigger: TGAATGCCGAGGCGGCAACAAAAATTTTGACAGAAT...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTTTCTTAATGACCCTTaGCTGCATTTCTTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFFLNDP*LHFFPL
Trigger: CAACGGGAAGAAATGCAGCAAAGGGTCATTAAGAAA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTTTGTCAGCTTCCTCTaGAGCTTTTATTTTGGCGTC +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFFVSFL*SFYFGV
Trigger: GACGCCAAAATAAAAGCTCAAGAGGAAGCTGACAAA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCAGGTGTCTGAGGACTTaGGCAAGATGTCATGGAATC +
Preference number: 5 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGRCLRT*ARCHGI
Trigger: GATTCCATGACATCTTGCCAAAGTCCTCAGACACCT...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS GCA 90 bp CAATTCTGTCAAAATTTTTGTTGCCGCCTCGGCATTCATAATACCTaGAGTACTCTTATTACCAGACTCTTCATAGATCATATGCCTTTG +
Preference number: 5 (lower is better)
Translates to: QFCQNFCCRLGIHNT*STLITRLFIDHMPL
Trigger: CAAAGGCATATGATCTATGAAGAGTCTGGTAATAAGAGTACTGCAGGTATTATGAATGCCGAGGCGGCAACAAAAATTTTGACAGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 90 bp GATCCATCGATTACTGGTTTAAATGTCGATCTTATATTTGAGGAATaGGTTGCAACACGATTAACCACATCTTGCTTCCTCCTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: DPSITGLNVDLIFEE*VATRLTTSCFLLSL
Trigger: TAAGGAAAGGAGGAAGCAAGATGTGGTTAATCGTGTTGCAACCCATTCCTCAAATATAAGATCGACATTTAAACCAGTAATCGATGGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS-3UTR CAA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCATGTCGATCTTATATTaGAGGAATGGGTTGCAACAC +
Preference number: 5 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSMSILY*RNGLQH
Trigger: GTGTTGCAACCCATTCCTCAAATATAAGATCGACAT...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTTAAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCCTTTTTAGTCTCATTTaGTTGCTGCCCATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: FKHLEELNIPHGTTAIYSLFSLI*LLPIFE
Trigger: CTCAAAGATGGGCAGCAACAAAATGAGACTAAAAAG...GGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTCTAGAAATACCAGCTaGTGTGTCATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFSRNTS*CVIFLA
Trigger: TGCCAAGAAAATGACACACAAGCTGGTATTTCTAGA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp TTCTGCAATCAGATTCTTCTAGAAACTCCACAGTTACAGTTTCAGGAAAGCATCTCTAGAAATACCAGCTaGTGTGTCATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: FCNQILLETPQLQFQESISRNTS*CVIFLA
Trigger: TGCCAAGAAAATGACACACAAGCTGGTATTTCTAGA...GATGCTTTCCTGAAACTGTAACTGTGGAGTTTCTAGAAGAATCTGATTGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGATGTAAATTTTTCCTTTaGTGCTTCATCCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRCKFFL*CFILLV
Trigger: CACCAGAAGGATGAAGCACAAAAGGAAAAATTTACA...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AGTGGCAAAGAACCAGGGAATCTGAAAGAATTACCTCCTTTTACTAATCCAAGACACAGACAGGGTGTGTaGAATAGGCATTATTTTATA +
Preference number: 5 (lower is better)
Translates to: SGKEPGNLKELPPFTNPRHRQGV*NRHYFI
Trigger: TATAAAATAATGCCTATTCAACACACCCTGTCTGTG...TCTTGGATTAGTAAAAGGAGGTAATTCTTTCAGATTCCCTGGTTCTTTGCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACATTTAGAGGAATTAAACATACCCCACGGGACAACAGCCATATACTCCTTTTTTAGTCTCATTTTGTaGCTGCCCATCTTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: KHLEELNIPHGTTAIYSFFSLIL*LPIFEF
Trigger: AAACTCAAAGATGGGCAGCAACAAAATGAGACTAAA...AAAGGAGTATATGGCTGTTGTCCCGTGGGGTATGTTTAATTCCTCTAAATGTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS-3UTR CAA 90 bp AAACCAAAGGTAACCTTCTCTATTCTATATCAAAAGTACAATACTCTGAGTGGCCACAGACAGGGTGTGTaGAATAGGCATTATTTTATA +
Preference number: 5 (lower is better)
Translates to: KPKVTFSILYQKYNTLSGHRQGV*NRHYFI
Trigger: TATAAAATAATGCCTATTCAACACACCCTGTCTGTG...GCCACTCAGAGTATTGTACTTTTGATATAGAATAGAGAAGGTTACCTTTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370663.9
CDS GCA 72 bp CAGCTCTCTCAAGGATGGGCTGCCGCCAGCGCCAGCTaGGGCGCCGTCCGCCATCATCGGAGTCGGGACCGG +
Preference number: 6 (lower is better)
Translates to: QLSQGWAAASAS*GAVRHHRSRDR
Trigger: CCGGTCCCGACTCCGATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316077.14
ENST00000370660.3
CDS GCA 72 bp CACCTCTGGCAGTGCTTCCAGACTCACTTCCGGGGGTaGTTCCAGGCTCGCCTCCGGGGATGCTACTATGCT +
Preference number: 6 (lower is better)
Translates to: HLWQCFQTHFRG*FQARLRGCYYA
Trigger: AGCATAGTAGCATCCCCGGAGGCGAGCCTGGAAGCACCCCCGGAAGTGAGTCTGGAAGCACTGCCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 90 bp GGAGATGCCTCCATGCTCTCCTTGGGTGACCCTTTCACACTCTCCTaGGGGGCTACTTCTGCGCTCCCCTTGGGAGGTGCTTCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: GDASMLSLGDPFTLS*GATSALPLGGASRL
Trigger: GAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 72 bp CCAGGCTCGCCTCCGGGGATGCTACTATGCTCACCTTaGGAACTGTTTCCAGGTCCACCTTCGGGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: PGSPPGMLLCSP*ELFPGPPSGVL
Trigger: AAGCACTCCCGAAGGTGGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAGCATCCCCGGAGGCGAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 72 bp CCATGCTCTCCTTGGGTGACCCTTTCACACTCTCCTTaGGGGCTACTTCTGCGCTCCCCTTGGGAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: PCSPWVTLSHSP*GLLLRSPWEVL
Trigger: AAGCACCTCCCAAGGGGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp TCCAGGCTCGCCTCCGGGGATGCTACTATGCTCACCTaGGGAACTGTTTCCAGGTCCACCTTCGGGAGTGCT +
Preference number: 6 (lower is better)
Translates to: SRLASGDATMLT*GTVSRSTFGSA
Trigger: AGCACTCCCGAAGGTGGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAGCATCCCCGGAGGCGAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 90 bp GGGGATGCTTTCACCATCGCCTCAGGAGATGCCTCCATGCTCTCCTaGGGTGACCCTTTCACACTCTCCTTGGGGGCTACTTCTGCGCTC +
Preference number: 6 (lower is better)
Translates to: GDAFTIASGDASMLS*GDPFTLSLGATSAL
Trigger: GAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS TCA 72 bp CATCGCCTCAGGAGATGCCTCCATGCTCTCCTTGGGTaGCCCTTTCACACTCTCCTTGGGGGCTACTTCTGC +
Preference number: 6 (lower is better)
Translates to: HRLRRCLHALLG*PFHTLLGGYFC
Trigger: GCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 90 bp TCTCGTTTGCTGCAGCAACTCGGGGGCTGGTCATGTCTCACTTGGTaGATGGCAGCCTTCTCAGCTCTGGAATTCCCACTGCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: SRLLQQLGGWSCLTW*MAAFSALEFPLQHC
Trigger: GCAGTGCTGCAGTGGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCAGCAAACGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS TCA 72 bp TGCAGCAACTCGGGGGCTGGTCATGTCTCACTTGGTTaGTGGCAGCCTTCTCAGCTCTGGAATTCCCACTGC +
Preference number: 6 (lower is better)
Translates to: CSNSGAGHVSLG*WQPSQLWNSHC
Trigger: GCAGTGGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS GCA 72 bp CACCTTGGGAACTGTTTCCAGGTCCACCTTCGGGAGTaGTTCTATGCTCAACTCGGGGGATGCGTCCATGCT +
Preference number: 6 (lower is better)
Translates to: HLGNCFQVHLRE*FYAQLGGCVHA
Trigger: AGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGACCTGGAAACAGTTCCCAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 72 bp GGGATGCTTTCACCATCGCCTCAGGAGATGCCTCCATaGTCTCCTTGGGTGACCCTTTCACACTCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: GMLSPSPQEMPP*SPWVTLSHSPW
Trigger: CCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 72 bp TCACCATCGCCTCAGGAGATGCCTCCATGCTCTCCTTaGGTGACCCTTTCACACTCTCCTTGGGGGCTACTT +
Preference number: 6 (lower is better)
Translates to: SPSPQEMPPCSP*VTLSHSPWGLL
Trigger: AAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp TTCACCATCGCCTCAGGAGATGCCTCCATGCTCTCCTaGGGTGACCCTTTCACACTCTCCTTGGGGGCTACT +
Preference number: 6 (lower is better)
Translates to: FTIASGDASMLS*GDPFTLSLGAT
Trigger: AGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp CTGCAGCAACTCGGGGGCTGGTCATGTCTCACTTGGTaGATGGCAGCCTTCTCAGCTCTGGAATTCCCACTG +
Preference number: 6 (lower is better)
Translates to: LQQLGGWSCLTW*MAAFSALEFPL
Trigger: CAGTGGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS CAA 90 bp GCAATCTCGTTTGCTGCAGCAACTCGGGGGCTGGTCATGTCTCACTaGGTTGATGGCAGCCTTCTCAGCTCTGGAATTCCCACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: AISFAAATRGLVMSH*VDGSLLSSGIPTAA
Trigger: TGCTGCAGTGGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCAGCAAACGAGATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS GCA 72 bp GAACTGTTTCCAGGTCCACCTTCGGGAGTGCTTCTATaGTCAACTCGGGGGATGCGTCCATGCTCATCTCAG +
Preference number: 6 (lower is better)
Translates to: ELFPGPPSGVLL*STRGMRPCSSQ
Trigger: CTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGACCTGGAAACAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 72 bp TTGCTGCAGCAACTCGGGGGCTGGTCATGTCTCACTTaGTTGATGGCAGCCTTCTCAGCTCTGGAATTCCCA +
Preference number: 6 (lower is better)
Translates to: LLQQLGGWSCLT*LMAAFSALEFP
Trigger: TGGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS CAA 72 bp TTTGCTGCAGCAACTCGGGGGCTGGTCATGTCTCACTaGGTTGATGGCAGCCTTCTCAGCTCTGGAATTCCC +
Preference number: 6 (lower is better)
Translates to: FAAATRGLVMSH*VDGSLLSSGIP
Trigger: GGGAATTCCAGAGCTGAGAAGGCTGCCATCAACCAAGTGAGACATGACCAGCCCCCGAGTTGCTGCAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370663.9
CDS CAA 90 bp GCTTTTGCCTTGGGAGATGCTTCCATGCTTGCTTCAAGGGATGTCTaGGGGGATGCTTTCACCATCGCCTCAGGAGATGCCTCCATGCTC +
Preference number: 6 (lower is better)
Translates to: AFALGDASMLASRDV*GDAFTIASGDASML
Trigger: GAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 72 bp GGAGTGCTTCTATGCTCAACTCGGGGGATGCGTCCATaGTCATCTCAGAATCATATGTGCTCACCACAGGCG +
Preference number: 6 (lower is better)
Translates to: GVLLCSTRGMRP*SSQNHMCSPQA
Trigger: CGCCTGTGGTGAGCACATATGATTCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 72 bp TGCTTCCATGCTTGCTTCAAGGGATGTCTTGGGGGATaGTTTCACCATCGCCTCAGGAGATGCCTCCATGCT +
Preference number: 6 (lower is better)
Translates to: CFHACFKGCLGG*FHHRLRRCLHA
Trigger: AGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CCA 72 bp TGGGAGATGCTTCCATGCTTGCTTCAAGGGATGTCTTaGGGGATGCTTTCACCATCGCCTCAGGAGATGCCT +
Preference number: 6 (lower is better)
Translates to: WEMLPCLLQGMS*GMLSPSPQEMP
Trigger: AGGCATCTCCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp TTGGGAGATGCTTCCATGCTTGCTTCAAGGGATGTCTaGGGGGATGCTTTCACCATCGCCTCAGGAGATGCC +
Preference number: 6 (lower is better)
Translates to: LGDASMLASRDV*GDAFTIASGDA
Trigger: GGCATCTCCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 90 bp TCTTTGGAGCGTCTCTCGCTTTTGCCTTGGGAGATGCTTCCATGCTaGCTTCAAGGGATGTCTTGGGGGATGCTTTCACCATCGCCTCAG +
Preference number: 6 (lower is better)
Translates to: SLERLSLLPWEMLPC*LQGMSWGMLSPSPQ
Trigger: CTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTCCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 72 bp CACCTTCGGGAGTGCTTCTATGCTCAACTCGGGGGATaGGTCCATGCTCATCTCAGAATCATATGTGCTCAC +
Preference number: 6 (lower is better)
Translates to: HLRECFYAQLGG*VHAHLRIICAH
Trigger: GTGAGCACATATGATTCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 72 bp GAGCGTCTCTCGCTTTTGCCTTGGGAGATGCTTCCATaGTTGCTTCAAGGGATGTCTTGGGGGATGCTTTCA +
Preference number: 6 (lower is better)
Translates to: ERLSLLPWEMLP*LLQGMSWGMLS
Trigger: TGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp CGTCTCTCGCTTTTGCCTTGGGAGATGCTTCCATGCTaGCTTCAAGGGATGTCTTGGGGGATGCTTTCACCA +
Preference number: 6 (lower is better)
Translates to: RLSLLPWEMLPC*LQGMSWGMLSP
Trigger: TGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 72 bp TTTCTTTGGAGCGTCTCTCGCTTTTGCCTTGGGAGATaGTTCCATGCTTGCTTCAAGGGATGTCTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: FLWSVSRFCLGR*FHACFKGCLGG
Trigger: TCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTCCAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp TGTCCATTTCTGATTTCTTTGGAGCGTCTCTCGCTTTaGCCTTGGGAGATGCTTCCATGCTTGCTTCAAGGG +
Preference number: 6 (lower is better)
Translates to: CPFLISLERLSL*PWEMLPCLLQG
Trigger: CCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTCCAAAGAAATCAGAAATGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS GCA 72 bp ACGAGCAAGGCGGCGCAATTCTGTCAAAATTTTTGTTaGCGCCTCGGCATTCATAATACCTGCAGTACTCTT +
Preference number: 6 (lower is better)
Translates to: TSKAAQFCQNFC*RLGIHNTCSTL
Trigger: AAGAGTACTGCAGGTATTATGAATGCCGAGGCGGCAACAAAAATTTTGACAGAATTGCGCCGCCTTGCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000495432.1
CDS GCA 72 bp TTGTTGCTGCCCATCTTTGAGTTTCAAGTGGTCTTCTaGTTGGCCTCCAACTGCTTCCTTTGCCATGTCTTT +
Preference number: 6 (lower is better)
Translates to: LLLPIFEFQVVF*LASNCFLCHVF
Trigger: AAAGACATGGCAAAGGAAGCAGTTGGAGGCCAAGCAGAAGACCACTTGAAACTCAAAGATGGGCAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000489788.5
ENST00000495432.1
CDS GCA 72 bp ACTGGCAGCCAGTGGCCAAATGAGGAGAAACAGGTTTaGTTCTTCTCTTATTGTCTAAAGGTGTCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: TGSQWPNEEKQV*FFSYCLKVSED
Trigger: GTCCTCAGACACCTTTAGACAATAAGAGAAGAAGCAAACCTGTTTCTCCTCATTTGGCCACTGGCTGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471510.1
CDS CCA 72 bp GAAATAAGTGGTAATGGTGATGGAGGGCAGTTCTTTTaGATTTGCCTGTTAGTGCTGATGGGAGACGGCAGA +
Preference number: 6 (lower is better)
Translates to: EISGNGDGGQFF*ICLLVLMGDGR
Trigger: TCTGCCGTCTCCCATCAGCACTAACAGGCAAATCCAAAAGAACTGCCCTCCATCACCATTACCACTTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000477124.1
CDS CCA 72 bp AGGATCTGCTGGTGGTGTTGGTTTCATCCGCCTTTCTaGTTTTCGTTGTGTGACTGGTCATTCTTTTGGAAG +
Preference number: 6 (lower is better)
Translates to: RICWWCWFHPPF*FSLCDWSFFWK
Trigger: CTTCCAAAAGAATGACCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACACCACCAGCAGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS CAA 90 bp GTCTTCCTGATCCAGCCATCCTTTCTTCTTTTTAGTCTCATTTTGTaGCTGCCCATCTTTGAGTTTCAAGTGGTCTTCTGCTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: VFLIQPSFLLFSLIL*LPIFEFQVVFCLAS
Trigger: GGAGGCCAAGCAGAAGACCACTTGAAACTCAAAGATGGGCAGCAACAAAATGAGACTAAAAAGAAGAAAGGATGGCTGGATCAGGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000489788.5
ENST00000495432.1
CDS TCA 72 bp TGCTTGGCCTCCAACTGCTTCCTTTGCCATGTCTTTTaGTTTCTTAATGACCCTTTGCTGCATTTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: CLASNCFLCHVF*FLNDPLLHFFP
Trigger: CGGGAAGAAATGCAGCAAAGGGTCATTAAGAAATCAAAAGACATGGCAAAGGAAGCAGTTGGAGGCCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000495432.1
CDS CAA 72 bp GATAGACGCTTCTTGGCAATAGGGATTAAGGCCTGTTaGTCCATTTCTGATTTCTTTGGAGCGTCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: DRRFLAIGIKAC*SISDFFGASLA
Trigger: AGCGAGAGACGCTCCAAAGAAATCAGAAATGGACAAACAGGCCTTAATCCCTATTGCCAAGAAGCGTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp TGGTGGTGTTGGTTTCATCCGCCTTTCTGGTTTTCGTaGTGTGACTGGTCATTCTTTTGGAAGATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: WWCWFHPPFWFS*CDWSFFWKMVL
Trigger: CAAGACCATCTTCCAAAAGAATGACCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACACCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS CAA 90 bp AGGATCTGCTGGTGGTGTTGGTTTCATCCGCCTTTCTGGTTTTCGTaGTGTGACTGGTCATTCTTTTGGAAGATGGTCTTGAAACTACTT +
Preference number: 6 (lower is better)
Translates to: RICWWCWFHPPFWFS*CDWSFFWKMVLKLL
Trigger: AAGTAGTTTCAAGACCATCTTCCAAAAGAATGACCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACACCACCAGCAGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS CAA 90 bp GCTGATGGAAACATTTCATTCAATGAGTCCTTGTCGCTTTCTTCGTaGTCAGCCTCAGCCTCTTCATATATGTCATGGCTGGATGTTTCT +
Preference number: 6 (lower is better)
Translates to: ADGNISFNESLSLSS*SASASSYMSWLDVS
Trigger: AGAAACATCCAGCCATGACATATATGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAAGGACTCATTGAATGAAATGTTTCCATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS TCA 72 bp GTGTTGGTTTCATCCGCCTTTCTGGTTTTCGTTGTGTaGCTGGTCATTCTTTTGGAAGATGGTCTTGAAACT +
Preference number: 6 (lower is better)
Translates to: VLVSSAFLVFVV*LVILLEDGLET
Trigger: AGTTTCAAGACCATCTTCCAAAAGAATGACCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS GCA 72 bp GGAGGAATGGGATTTCCAAATGAGGAGAAACAGGTTTaGTTCTTCTCTTATTGTCTAAAGGTGTCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: GGMGFPNEEKQV*FFSYCLKVSED
Trigger: GTCCTCAGACACCTTTAGACAATAAGAGAAGAAGCAAACCTGTTTCTCCTCATTTGGAAATCCCATTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370661.5
CDS CCA 72 bp TGTCTAAAGGTGTCTGAGGACTTTGGCAAGATGTCATaGAATCCTTCAGATTTTGTTTGTGCAGAGGATCTG +
Preference number: 6 (lower is better)
Translates to: CLKVSEDFGKMS*NPSDFVCAEDL
Trigger: CAGATCCTCTGCACAAACAAAATCTGAAGGATTCCATGACATCTTGCCAAAGTCCTCAGACACCTTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS CAA 72 bp AACATTTCATTCAATGAGTCCTTGTCGCTTTCTTCGTaGTCAGCCTCAGCCTCTTCATATATGTCATGGCTG +
Preference number: 6 (lower is better)
Translates to: NISFNESLSLSS*SASASSYMSWL
Trigger: CAGCCATGACATATATGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAAGGACTCATTGAATGAAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000489788.5
ENST00000495432.1
CDS CAA 90 bp GTGCCATTTAGAATGGCTGATGGAAACATTTCATTCAATGAGTCCTaGTCGCTTTCTTCGTTGTCAGCCTCAGCCTCTTCATATATGTCA +
Preference number: 6 (lower is better)
Translates to: VPFRMADGNISFNES*SLSSLSASASSYMS
Trigger: TGACATATATGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAAGGACTCATTGAATGAAATGTTTCCATCAGCCATTCTAAATGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 90 bp TGGCTGGTACCATCTTCTAGAAATACCAGCTTGTGTGTCATTTTCTaGGCATTGTTGAACGGCATTTTAAATTTGGTAGGTGAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: WLVPSSRNTSLCVIF*ALLNGILNLVGEPV
Trigger: CACAGGCTCACCTACCAAATTTAAAATGCCGTTCAACAATGCCAAGAAAATGACACACAAGCTGGTATTTCTAGAAGATGGTACCAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 90 bp GGCTCTTTACGGACCTGGCTGGTACCATCTTCTAGAAATACCAGCTaGTGTGTCATTTTCTTGGCATTGTTGAACGGCATTTTAAATTTG +
Preference number: 6 (lower is better)
Translates to: GSLRTWLVPSSRNTS*CVIFLALLNGILNL
Trigger: CAAATTTAAAATGCCGTTCAACAATGCCAAGAAAATGACACACAAGCTGGTATTTCTAGAAGATGGTACCAGCCAGGTCCGTAAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 90 bp ACTGATGGAAACATTTCATTCAATGAGTCCTTGTCGCTTTCTTCGTaGTCAGCCTCAGCCTCTTCATATATGTCATGGCTGGATGTTTCT +
Preference number: 6 (lower is better)
Translates to: TDGNISFNESLSLSS*SASASSYMSWLDVS
Trigger: AGAAACATCCAGCCATGACATATATGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAAGGACTCATTGAATGAAATGTTTCCATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489788.5
CDS CAA 90 bp TCCTGTTCAACATCCACTGATGGAAACATTTCATTCAATGAGTCCTaGTCGCTTTCTTCGTTGTCAGCCTCAGCCTCTTCATATATGTCA +
Preference number: 6 (lower is better)
Translates to: SCSTSTDGNISFNES*SLSSLSASASSYMS
Trigger: TGACATATATGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAAGGACTCATTGAATGAAATGTTTCCATCAGTGGATGTTGAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489788.5
CDS TCA 72 bp ACAGGTTTGCTTCTTCTCTTATTGTCTAAAGGTGTCTaGGGACTTTGGCAAGATGTCATGGAATCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: TGLLLLLLSKGV*GLWQDVMESFR
Trigger: TCTGAAGGATTCCATGACATCTTGCCAAAGTCCTCAGACACCTTTAGACAATAAGAGAAGAAGCAAACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370661.5
ENST00000370663.9
ENST00000471510.1
CDS CCA 72 bp TCGCCATTAAAATATGTTTTTGGCTCTTTACGGACCTaGCTGGTACCATCTTCTAGAAATACCAGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: SPLKYVFGSLRT*LVPSSRNTSLC
Trigger: ACACAAGCTGGTATTTCTAGAAGATGGTACCAGCCAGGTCCGTAAAGAGCCAAAAACATATTTTAATGGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp TTCTTCTTTTTAGTCTCATTTTGTTGCTGCCCATCTTaGAGTTTCAAGTGGTCTTCTGCTTGGCCTCCAACT +
Preference number: 6 (lower is better)
Translates to: FFFLVSFCCCPS*SFKWSSAWPPT
Trigger: AGTTGGAGGCCAAGCAGAAGACCACTTGAAACTCAAAGATGGGCAGCAACAAAATGAGACTAAAAAGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
ENST00000489788.5
ENST00000495432.1
CDS TCA 72 bp AATTTTGAAGGCCTGCAGATGACAAAGGCATTTGTCTaGTTAAAGCAGAAGTACCCTGTTCAAGTTTTTCAG +
Preference number: 6 (lower is better)
Translates to: NFEGLQMTKAFV*LKQKYPVQVFQ
Trigger: CTGAAAAACTTGAACAGGGTACTTCTGCTTTAATCAGACAAATGCCTTTGTCATCTGCAGGCCTTCAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370663.9
CDS CCA 72 bp ATTACTGGTTTAAATGTCGATCTTATATTTGAGGAATaGGTTGCAACACGATTAACCACATCTTGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: ITGLNVDLIFEE*VATRLTTSCFL
Trigger: GAGGAAGCAAGATGTGGTTAATCGTGTTGCAACCCATTCCTCAAATATAAGATCGACATTTAAACCAGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9
CDS CAA 72 bp CCATCTTCTAGAAATACCAGCTTGTGTGTCATTTTCTaGGCATTGTTGAACGGCATTTTAAATTTGGTAGGT +
Preference number: 6 (lower is better)
Translates to: PSSRNTSLCVIF*ALLNGILNLVG
Trigger: ACCTACCAAATTTAAAATGCCGTTCAACAATGCCAAGAAAATGACACACAAGCTGGTATTTCTAGAAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316077.14
ENST00000370660.3
ENST00000370661.5
ENST00000370663.9