RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAN2B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000013288

Ensembl transcript IDs: ENST00000285599.8, ENST00000504248.5, ENST00000504960.1, ENST00000505907.1

Found 902 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACTCTGACGGCTGCTGTGCCTTCTCTGCTCGGCAGGCGGTGCCCTaGGGCACAGGTGGGCGTCTGGGGCTGGAACTCTCGCTAGGCGCT +
Preference number: 1 (lower is better)
Translates to: DSDGCCAFSARQAVP*GTGGRLGLELSLGA
Trigger: AGCGCCTAGCGAGAGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGCACCGCCTGCCGAGCAGAGAAGGCACAGCAGCCGTCAGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 90 bp CCCAAACCTCTGTGGCGGCCAGGCCCCGTCCTCCAGCTCCAGCGGTaGAGCATGCTCAAATCCCAGGTCCCTGTGAGCGAGCGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: PKPLWRPGPVLQLQR*SMLKSQVPVSERSS
Trigger: GGAGGAGCGCTCGCTCACAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGAGCTGGAGGACGGGGCCTGGCCGCCACAGAGGTTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 90 bp AGCCTCGCAAGGTCGCACAGGCCGGGACAGGCAGATGGTTGGATGTaGACCGGGTCTGACCAGCTGCTGAGCCTGGCTGGGAGTCCTGGG +
Preference number: 1 (lower is better)
Translates to: SLARSHRPGQADGWM*TGSDQLLSLAGSPG
Trigger: CCCAGGACTCCCAGCCAGGCTCAGCAGCTGGTCAGACCCGGTGCACATCCAACCATCTGCCTGTCCCGGCCTGTGCGACCTTGCGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 90 bp TGCAGGAGCTCACGGTGGCACATGTCGTATGAGGCAGGGACCGGCTaGTGGGCTGAGGTCAGCAGGGCCAAGGTGGGCAGAAGCCCCTGG +
Preference number: 1 (lower is better)
Translates to: CRSSRWHMSYEAGTG*WAEVSRAKVGRSPW
Trigger: CCAGGGGCTTCTGCCCACCTTGGCCCTGCTGACCTCAGCCCATCAGCCGGTCCCTGCCTCATACGACATGTGCCACCGTGAGCTCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 90 bp CTCTGGGGAGGCATCCTGGGGAGCTTGAGCAGGTGCTGGCCAGAGTaGATGGGACCTGTGCGTCCCAGGCAGAGGGCATGGTGCGGACAG +
Preference number: 1 (lower is better)
Translates to: LWGGILGSLSRCWPE*MGPVRPRQRAWCGQ
Trigger: CTGTCCGCACCATGCCCTCTGCCTGGGACGCACAGGTCCCATTCACTCTGGCCAGCACCTGCTCAAGCTCCCCAGGATGCCTCCCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp CTGCTGTGCCTTCTCTGCTCGGCAGGCGGTGCCCTGAGGCACAGGTaGGCGTCTGGGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTC +
Preference number: 1 (lower is better)
Translates to: LLCLLCSAGGALRHR*ASGAGTLARRYNFL
Trigger: GAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGCACCGCCTGCCGAGCAGAGAAGGCACAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 90 bp CATGCTTTACCAGGTGGCCGAGCTGGAGGAGCAGCCCGGGAGGTGTaGCATTTTGAGCTGCCCACCCCACCGCGGAGTTCTCCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: HALPGGRAGGAAREV*HFELPTPPRSSPLP
Trigger: GGGGAGAGGAGAACTCCGCGGTGGGGTGGGCAGCTCAAAATGCCACACCTCCCGGGCTGCTCCTCCAGCTCGGCCACCTGGTAAAGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 90 bp TCTGCTGTGGCTCCCACCGTGGCAACGGCCTATGGCATCCCCTTCTaGCAGGACTCCTGTGGGCCTCTTGGCGTTTCTGCCCACCCTGAG +
Preference number: 1 (lower is better)
Translates to: SAVAPTVATAYGIPF*QDSCGPLGVSAHPE
Trigger: CTCAGGGTGGGCAGAAACGCCAAGAGGCCCACAGGAGTCCTGGCAGAAGGGGATGCCATAGGCCGTTGCCACGGTGGGAGCCACAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp GAAAACACGTGGCACGCAGTAGGTCCACAGTTACCACTGGCAGCCTaGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTG +
Preference number: 1 (lower is better)
Translates to: ENTWHAVGPQLPLAA*QAWQGPDGRCASVL
Trigger: CAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGGTAACTGTGGACCTACTGCGTGCCACGTGTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 90 bp CGGCTCAGGTCATGCCTTCTGGGGAGGGAGCGTGGGCAGGCCAGGTaGCGGAAGCCTCGCCTGATAGTAGAGCTGAGAGGGCAACATCAG +
Preference number: 1 (lower is better)
Translates to: RLRSCLLGRERGQAR*RKPRLIVELRGQHQ
Trigger: CTGATGTTGCCCTCTCAGCTCTACTATCAGGCGAGGCTTCCGCCACCTGGCCTGCCCACGCTCCCTCCCCAGAAGGCATGACCTGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp GAAAGCAGCCTCGCAAGGTCGCACAGGCCGGGACAGGCAGATGGTTaGATGTGCACCGGGTCTGACCAGCTGCTGAGCCTGGCTGGGAGT +
Preference number: 1 (lower is better)
Translates to: ESSLARSHRPGQADG*MCTGSDQLLSLAGS
Trigger: ACTCCCAGCCAGGCTCAGCAGCTGGTCAGACCCGGTGCACATCCAACCATCTGCCTGTCCCGGCCTGTGCGACCTTGCGAGGCTGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp ATCCATGCCTCTGGTGGCTGCTCACCTGACCCCACCTCACAGGGGTaGCCTATTGCTTGGTCAGCAACTCCAGCCCAGCTCCTGCCTGGC +
Preference number: 1 (lower is better)
Translates to: IHASGGCSPDPTSQG*PIAWSATPAQLLPG
Trigger: GCCAGGCAGGAGCTGGGCTGGAGTTGCTGACCAAGCAATAGGCCACCCCTGTGAGGTGGGGTCAGGTGAGCAGCCACCAGAGGCATGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 90 bp TGTGCGTCCCAGGCAGAGGGCATGGTGCGGACAGGGAGTGGAGCCTaGAAGCTGCCTGTAGTGCAGGAGCTCACGGTGGCACATGTCGTA +
Preference number: 1 (lower is better)
Translates to: CASQAEGMVRTGSGA*KLPVVQELTVAHVV
Trigger: TACGACATGTGCCACCGTGAGCTCCTGCACTACAGGCAGCTTCCAGGCTCCACTCCCTGTCCGCACCATGCCCTCTGCCTGGGACGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp GAAAGAAATGAGGCGGCTCAGGTCATGCCTTCTGGGGAGGGAGCGTaGGCAGGCCAGGTGGCGGAAGCCTCGCCTGATAGTAGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: ERNEAAQVMPSGEGA*AGQVAEASPDSRAE
Trigger: CTCAGCTCTACTATCAGGCGAGGCTTCCGCCACCTGGCCTGCCCACGCTCCCTCCCCAGAAGGCATGACCTGAGCCGCCTCATTTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 90 bp CCTCAACCTCCCACTGCACATCCATGCCTCTGGTGGCTGCTCACCTaGCCCCACCTCACAGGGGTGGCCTATTGCTTGGTCAGCAACTCC +
Preference number: 1 (lower is better)
Translates to: PQPPTAHPCLWWLLT*PHLTGVAYCLVSNS
Trigger: GGAGTTGCTGACCAAGCAATAGGCCACCCCTGTGAGGTGGGGTCAGGTGAGCAGCCACCAGAGGCATGGATGTGCAGTGGGAGGTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 90 bp GCTCTAAAGGGCTCCTGCCTCACTCCTTGTGCCTCAACCTCCCACTaGACATCCATGCCTCTGGTGGCTGCTCACCTGACCCCACCTCAC +
Preference number: 1 (lower is better)
Translates to: ALKGSCLTPCASTSH*TSMPLVAAHLTPPH
Trigger: GTGAGGTGGGGTCAGGTGAGCAGCCACCAGAGGCATGGATGTGCAGTGGGAGGTTGAGGCACAAGGAGTGAGGCAGGAGCCCTTTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 90 bp CTGGCCGTGTACTTTACAGATGAGGACACTGAAGCGGGAGGTGCATaGTTTACCAGGTGGCCGAGCTGGAGGAGCAGCCCGGGAGGTGTG +
Preference number: 1 (lower is better)
Translates to: LAVYFTDEDTEAGGA*FTRWPSWRSSPGGV
Trigger: CACACCTCCCGGGCTGCTCCTCCAGCTCGGCCACCTGGTAAAGCATGCACCTCCCGCTTCAGTGTCCTCATCTGTAAAGTACACGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 90 bp CACACCACGAACTCGGTGTCCTCAGGAGCCCAGGTCCTCCCCTGGTaGCTGACACAGCTCCCTCATCTGCTTCTCACAGCACATCTGCGA +
Preference number: 1 (lower is better)
Translates to: HTTNSVSSGAQVLPW*LTQLPHLLLTAHLR
Trigger: TCGCAGATGTGCTGTGAGAAGCAGATGAGGGAGCTGTGTCAGGCACCAGGGGAGGACCTGGGCTCCTGAGGACACCGAGTTCGTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 90 bp CAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTaGGTCTTGTGCTCTGCCTTAGGCAGAAAGTCCTGGGTTTGTGTT +
Preference number: 1 (lower is better)
Translates to: QAWQGPDGRCASVLL*VLCSALGRKSWVCV
Trigger: AACACAAACCCAGGACTTTCTGCCTAAGGCAGAGCACAAGACTCACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 90 bp TCCTTGTGCCTCAACCTCCCACTGCACATCCATGCCTCTGGTGGCTaGTCACCTGACCCCACCTCACAGGGGTGGCCTATTGCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: SLCLNLPLHIHASGG*SPDPTSQGWPIAWS
Trigger: TGACCAAGCAATAGGCCACCCCTGTGAGGTGGGGTCAGGTGAGCAGCCACCAGAGGCATGGATGTGCAGTGGGAGGTTGAGGCACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 90 bp CGCAAACAAGCAGACGGCAAAAGACAAAAGCCAGTCTGCCGGCGATaGCGGGAAGATGACAGTGATCGGGCCCACGGTGACAGCGCTTGG +
Preference number: 1 (lower is better)
Translates to: RKQADGKRQKPVCRR*REDDSDRAHGDSAW
Trigger: CCAAGCGCTGTCACCGTGGGCCCGATCACTGTCATCTTCCCGCCATCGCCGGCAGACTGGCTTTTGTCTTTTGCCGTCTGCTTGTTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp AGACACACCACGAACTCGGTGTCCTCAGGAGCCCAGGTCCTCCCCTaGTGCCTGACACAGCTCCCTCATCTGCTTCTCACAGCACATCTG +
Preference number: 1 (lower is better)
Translates to: RHTTNSVSSGAQVLP*CLTQLPHLLLTAHL
Trigger: CAGATGTGCTGTGAGAAGCAGATGAGGGAGCTGTGTCAGGCACCAGGGGAGGACCTGGGCTCCTGAGGACACCGAGTTCGTGGTGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 90 bp GCAACTCCAGCCCAGCTCCTGCCTGGCCAAACCAGAGACTGTCTTTaGTGTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCC +
Preference number: 1 (lower is better)
Translates to: ATPAQLLPGQTRDCL*CLVAKLHVVQRSDS
Trigger: GGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGCCAGGCAGGAGCTGGGCTGGAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 90 bp CACAGGGGTGGCCTATTGCTTGGTCAGCAACTCCAGCCCAGCTCCTaGCTGGCCAAACCAGAGACTGTCTTTGCTGTCTGGTGGCCAAAC +
Preference number: 1 (lower is better)
Translates to: HRGGLLLGQQLQPSS*LAKPETVFAVWWPN
Trigger: GTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGCCAGGCAGGAGCTGGGCTGGAGTTGCTGACCAAGCAATAGGCCACCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 90 bp CTCATGCAGCCCACATGCTCTAAAGGGCTCCTGCCTCACTCCTTGTaGCTCAACCTCCCACTGCACATCCATGCCTCTGGTGGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: LMQPTCSKGLLPHSL*LNLPLHIHASGGCS
Trigger: TGAGCAGCCACCAGAGGCATGGATGTGCAGTGGGAGGTTGAGGCACAAGGAGTGAGGCAGGAGCCCTTTAGAGCATGTGGGCTGCATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 90 bp AATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATaGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTT +
Preference number: 1 (lower is better)
Translates to: NGLSTPPPSTLGRES*CPSQPSPCLRALVL
Trigger: AAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 90 bp GAGCCAAGCCCCTTGCAGGGCTGTTGCCAGCATGGGATGAGTCTATaGAAACACGTGGCACGCAGTAGGTCCACAGTTACCACTGGCAGC +
Preference number: 1 (lower is better)
Translates to: EPSPLQGCCQHGMSL*KHVARSRSTVTTGS
Trigger: GCTGCCAGTGGTAACTGTGGACCTACTGCGTGCCACGTGTTTTCATAGACTCATCCCATGCTGGCAACAGCCCTGCAAGGGGCTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 90 bp TCTTGTGACCGCAAACAAGCAGACGGCAAAAGACAAAAGCCAGTCTaGCGGCGATGGCGGGAAGATGACAGTGATCGGGCCCACGGTGAC +
Preference number: 1 (lower is better)
Translates to: SCDRKQADGKRQKPV*RRWREDDSDRAHGD
Trigger: GTCACCGTGGGCCCGATCACTGTCATCTTCCCGCCATCGCCGGCAGACTGGCTTTTGTCTTTTGCCGTCTGCTTGTTTGCGGTCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp CCCAGCTCCTGCCTGGCCAAACCAGAGACTGTCTTTGCTGTCTGGTaGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTG +
Preference number: 1 (lower is better)
Translates to: PSSCLAKPETVFAVW*PNCTLSRGLTPSKL
Trigger: CAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGCCAGGCAGGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 90 bp CAGCCCAGCTCCTGCCTGGCCAAACCAGAGACTGTCTTTGCTGTCTaGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAG +
Preference number: 1 (lower is better)
Translates to: QPSSCLAKPETVFAV*WPNCTLSRGLTPSK
Trigger: CTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGCCAGGCAGGAGCTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 90 bp AAGACCATGAAGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTaGGAGGAAGCCCTCGTGGATCTCTTTGCCAAGGCAGTTTCTTGG +
Preference number: 1 (lower is better)
Translates to: KTMKKGGVGPIPASI*EEALVDLFAKAVSW
Trigger: CCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCTTCATGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 90 bp CACAGAAACCAAGCCTCATGCAGCCCACATGCTCTAAAGGGCTCCTaGCTCACTCCTTGTGCCTCAACCTCCCACTGCACATCCATGCCT +
Preference number: 1 (lower is better)
Translates to: HRNQASCSPHALKGS*LTPCASTSHCTSMP
Trigger: AGGCATGGATGTGCAGTGGGAGGTTGAGGCACAAGGAGTGAGGCAGGAGCCCTTTAGAGCATGTGGGCTGCATGAGGCTTGGTTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 90 bp TGCGTTCCTAACTCAATGGTCTTTCCACCCCACCACCGTCCACGTTaGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCA +
Preference number: 1 (lower is better)
Translates to: CVPNSMVFPPHHRPR*AGSHGVHPNRLLVS
Trigger: TGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGAGTTAGGAACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp ATAGTTCTGATATTGGACATCCCTGCTGTGTGGTTTCACCTCTCATaGACTCTGACGGCTGCTGTGCCTTCTCTGCTCGGCAGGCGGTGC +
Preference number: 1 (lower is better)
Translates to: IVLILDIPAVWFHLS*TLTAAVPSLLGRRC
Trigger: GCACCGCCTGCCGAGCAGAGAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATGTCCAATATCAGAACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 90 bp GAGGAAAGGATCCTCCGTGGCGAGGATCATGAAAGAGGAGGTGGGTaGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGGCTTCTCTG +
Preference number: 1 (lower is better)
Translates to: EERILRGEDHERGGG*PSKTSWRKGTGASL
Trigger: CAGAGAAGCCCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGCCACGGAGGATCCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 90 bp GGCTCACTGCTGTTGAAAGTGAATAAAGAACGTCCGGATTTCCTTTaGGTGGACGGTGATGATGGGGCCTCCTGGTGGCCTCGAGGGAGA +
Preference number: 1 (lower is better)
Translates to: GSLLLKVNKERPDFL*VDGDDGASWWPRGR
Trigger: TCTCCCTCGAGGCCACCAGGAGGCCCCATCATCACCGTCCACCCAAAGGAAATCCGGACGTTCTTTATTCACTTTCAACAGCAGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 90 bp GCCCACGGTGACAGCGCTTGGGGTCCATCGGACATGCCTGTTCGGTaGGAAAACACTCTGTCCTCTGTTCTAAGCACATCTGTTAGGTGT +
Preference number: 1 (lower is better)
Translates to: AHGDSAWGPSDMPVR*ENTLSSVLSTSVRC
Trigger: ACACCTAACAGATGTGCTTAGAACAGAGGACAGAGTGTTTTCTCACCGAACAGGCATGTCCGATGGACCCCAAGCGCTGTCACCGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 90 bp TGCCTGGCCAAACCAGAGACTGTCTTTGCTGTCTGGTGGCCAAACTaGACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCT +
Preference number: 1 (lower is better)
Translates to: CLAKPETVFAVWWPN*TLSRGLTPSKLVLS
Trigger: AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 90 bp TCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGCCCACATaGTCTAAAGGGCTCCTGCCTCACTCCTTGTGCCTCAACCTCCCA +
Preference number: 1 (lower is better)
Translates to: SIVFLTQKPSLMQPT*SKGLLPHSLCLNLP
Trigger: TGGGAGGTTGAGGCACAAGGAGTGAGGCAGGAGCCCTTTAGAGCATGTGGGCTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 90 bp CCGTCCCTGTTAGCTGTCATGCCTCTTCTCTCTTCCTCCAGTACCTaGCAACCACCAATGTGCTTTGTCTCTGATACACAGATTTGCCTA +
Preference number: 1 (lower is better)
Translates to: PSLLAVMPLLSSSST*QPPMCFVSDTQICL
Trigger: TAGGCAAATCTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCAGGTACTGGAGGAAGAGAGAAGAGGCATGACAGCTAACAGGGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 90 bp CTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTaGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCCTACAT +
Preference number: 1 (lower is better)
Translates to: LHVVQRSDSFQAGPF*VLSFSPRVPNNFLH
Trigger: ATGTAGGAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 90 bp GTCATGCCTCTTCTCTCTTCCTCCAGTACCTGGCAACCACCAATGTaGTTTGTCTCTGATACACAGATTTGCCTATTCTGGACATTTCAC +
Preference number: 1 (lower is better)
Translates to: VMPLLSSSSTWQPPM*FVSDTQICLFWTFH
Trigger: GTGAAATGTCCAGAATAGGCAAATCTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCAGGTACTGGAGGAAGAGAGAAGAGGCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 90 bp ACTCTGTCCTCTGTTCTAAGCACATCTGTTAGGTGTTTTGTGACTTaGAGCCAAACTCACTGCGTTCCTAACTCAATGGTCTTTCCACCC +
Preference number: 1 (lower is better)
Translates to: TLSSVLSTSVRCFVT*SQTHCVPNSMVFPP
Trigger: GGGTGGAAAGACCATTGAGTTAGGAACGCAGTGAGTTTGGCTGCAAGTCACAAAACACCTAACAGATGTGCTTAGAACAGAGGACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 90 bp CTCTGCCTTAGGCAGAAAGTCCTGGGTTTGTGTTTTGTGAATGAATaGCGCATGAGTGTGCCAAATATCCTTTACGTGACAGAAGAGGAG +
Preference number: 1 (lower is better)
Translates to: LCLRQKVLGLCFVNE*RMSVPNILYVTEEE
Trigger: CTCCTCTTCTGTCACGTAAAGGATATTTGGCACACTCATGCGTCATTCATTCACAAAACACAAACCCAGGACTTTCTGCCTAAGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR TCA 90 bp GTCTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTaGCTTTTGAGTAATGCTGCTATGAACGCGGGAGCACAGGTATTG +
Preference number: 1 (lower is better)
Translates to: VLIHLWMDIWVVATV*LLSNAAMNAGAQVL
Trigger: CAATACCTGTGCTCCCGCGTTCATAGCAGCATTACTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 90 bp GACCCTGGATTGTCTGACTCTAAGTCACCTTTCAAAGCAACTCTATaGGGAATCTGTTTTGTTTTTGGATTACACAGATGTTGTCTGTGT +
Preference number: 1 (lower is better)
Translates to: DPGLSDSKSPFKATL*GICFVFGLHRCCLC
Trigger: ACACAGACAACATCTGTGTAATCCAAAAACAAAACAGATTCCCCATAGAGTTGCTTTGAAAGGTGACTTAGAGTCAGACAATCCAGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTCGAGCGCTCCTCCACTaGCACCACGGACCCCAGCGC +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLRALLH*HHGPQR
Trigger: GCGCTGGGGTCCGTGGTGGCAGTGGAGGAGCGCTCG...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTGCTCAGGTGGCCCCGTaGCCAGTCCAGGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLAQVAP*PVQGGS
Trigger: GCTTCCTCCCTGGACTGGGCACGGGGCCACCTGAGC...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTCTCCTCTCCCCACATTaGTCAGGTGGCCCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLLLSPH*SGGPVP
Trigger: GGGCACGGGGCCACCTGAGCAATGTGGGGAGAGGAG...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAGGCAGGCTGGCCCTGTaGTGGGCACTGGTACCCGCC +
Preference number: 2 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSGRLAL*WALVPA
Trigger: GGCGGGTACCAGTGCCCAGCACAGGGCCAGCCTGCC...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCGTTACATGGAGTTCCTaGGGGAAGCCCTGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: GLELSLGATTSSPALWQSVTWSS*GKPWGR
Trigger: CCGGCCCCAGGGCTTCCCCCAGGAACTCCATGTAAC...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCGCCAAGAGGGGAACCTaGAAGGGGACGAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGAKRGT*KGTRPG
Trigger: CCCAGGCCTCGTCCCCTTCCAGGTTCCCCTCTTGGC...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTCCCATCCCTCCGCACTaGTTTTCCCTGTCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLPIPPH*FSLSWV
Trigger: GACCCAGGACAGGGAAAAGCAGTGCGGAGGGATGGG...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTTCCAGGTCCCACGCTaGCCTCCTTGCTTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWFQVPR*PPCFPG
Trigger: CCCTGGGAAGCAAGGAGGCCAGCGTGGGACCTGGAA...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTCAAATATCCTTTACGTaGCAGAAGAGGAGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: QPGKPGRARTADALRCCCQISFT*QKRRGL
Trigger: CAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTG...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGGCAGGTGGATCACCTaGAGTCAGGGGTTCGTGACC +
Preference number: 2 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRGRWIT*SQGFVT
Trigger: GGTCACGAACCCCTGACTTCAGGTGATCCACCTGCC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCAGAGCCAAGCCCCTTaGAGGGCTGTTGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGQSQAP*RAVASM
Trigger: CATGCTGGCAACAGCCCTGCAAGGGGCTTGGCTCTG...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTGGGAGATGGAGGTTaGAGCCAGCTGAGAGCGCAC +
Preference number: 2 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGLGDGG*SQLRAH
Trigger: GTGCGCTCTCAGCTGGCTGCAACCTCCATCTCCCAG...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGGCCCTGAGGCACAGGTaGGCGTCTGGGGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASALRHR*ASGAGT
Trigger: AGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGC...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTAGAGGGGCCTGGGTGTaGACCCTGGATTGTCTGACT +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLRGAWV*TLDCLT
Trigger: AGTCAGACAATCCAGGGTCCACACCCAGGCCCCTCT...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGGTGGCGCGCCCCTGTaGTCCCAGTTACTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGGGAPL*SQLLGR
Trigger: CCTCCCAAGTAACTGGGATCACAGGGGCGCGCCACC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTGATGCGCTTCGGTGCTaGTGTGAGTCTTGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLDALRC*CESCAL
Trigger: CAGAGCACAAGACTCACAGCAGCACCGAAGCGCATC...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGAGGCGGCTCAGGTCATaGCTTCTGGGGAGGGAGCGT +
Preference number: 2 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVRRLRS*LLGRER
Trigger: ACGCTCCCTCCCCAGAAGGCATGACCTGAGCCGCCT...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGTTACATGGAGTTCCTaGGGGAAGCCCTGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFVTWSS*GKPWGR
Trigger: CCGGCCCCAGGGCTTCCCCCAGGAACTCCATGTAAC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGGTCCACAGTTACCACTaGCAGCCTGGCAAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: SRAERATSAKRGTWKGTRVHSYH*QPGKPG
Trigger: GCCAGGCTTGCCAGGCTGCCAGTGGTAACTGTGGAC...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTTGCAGGAGCTCACGGTaGCACATGTCGTATGAGGCA +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLCRSSR*HMSYEA
Trigger: TGCCTCATACGACATGTGCCACCGTGAGCTCCTGCA...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGGCTGGCCAGAGTGAATaGGACCTGTGCGTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVAGQSE*DLCVPG
Trigger: GCCTGGGACGCACAGGTCCCATTCACTCTGGCCAGC...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CAA 90 bp GTGGGCCTCTTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTaGGTCCTGGCCCTAGTGGCCTCAATTCCTCATGGGTGTTGCCCT +
Preference number: 2 (lower is better)
Translates to: VGLLAFLPTLRAIHR*VLALVASIPHGCCP
Trigger: AGGGCAACACCCATGAGGAATTGAGGCCACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAAGAGGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGCTGCTGTGCCTTCTCTaGTCGGCAGGCGGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKLLCLL*SAGGAL
Trigger: CAGGGCACCGCCTGCCGAGCAGAGAAGGCACAGCAG...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGGGGAGGAAGCCCTCGTaGATCTCTTTGCCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: SRAERATSAKRGTWKGTRGRKPS*ISLPRQ
Trigger: CTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCC...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CAA 90 bp GAAGACCATGAAGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTaGGGAGGAAGCCCTCGTGGATCTCTTTGCCAAGGCAGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: EDHEEGRGGAHTSVH*GGSPRGSLCQGSFL
Trigger: CAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCTTCATGGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCCATTAGCCTGCAGATaGGCAGCTGACTCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVPLACR*AADSPV
Trigger: GACTGGGGAGTCAGCTGCTCATCTGCAGGCTAATGG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCCATGGGATGAGTCTATaGAAACACGTGGCACGCAGT +
Preference number: 2 (lower is better)
Translates to: GLELSLGATTSSPALWQSHGMSL*KHVARS
Trigger: ACTGCGTGCCACGTGTTTTCATAGACTCATCCCATG...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACCCATCCCTCCGCACTaGTTTTCCCTGTCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGPIPPH*FSLSWV
Trigger: GACCCAGGACAGGGAAAAGCAGTGCGGAGGGATGGG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAACTGAGAGCGCACCATTaGACTCCAGCCTGGGGGACG +
Preference number: 2 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKLRAHH*TPAWGT
Trigger: CGTCCCCCAGGCTGGAGTGCAATGGTGCGCTCTCAG...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGTCCAGCGGTGCAGCATaGTCAAATCCCAGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASSSGAA*SNPRSL
Trigger: CAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGA...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAACCCCGTAGAGGGGCCTaGGTGTGGACCCTGGATTGT +
Preference number: 2 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKPRRGA*VWTLDC
Trigger: ACAATCCAGGGTCCACACCCAGGCCCCTCTACGGGG...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAACCCTGTGCTGGGCACTaGTACCCGCCATGGCCTAGA +
Preference number: 2 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKPCAGH*YPPWPR
Trigger: TCTAGGCCATGGCGGGTACCAGTGCCCAGCACAGGG...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGCTTCGGTGCTGCTGTaGGTCTTGTGCTCTGCCTTA +
Preference number: 2 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFASVLL*VLCSAL
Trigger: TAAGGCAGAGCACAAGACTCACAGCAGCACCGAAGC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGGCTTCGGTGCTGCTGTaGGTCTTGTGCTCTGCCTTA +
Preference number: 2 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASASVLL*VLCSAL
Trigger: TAAGGCAGAGCACAAGACTCACAGCAGCACCGAAGC...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCATGGGATGAGTCTATaGAAACACGTGGCACGCAGT +
Preference number: 2 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRHGMSL*KHVARS
Trigger: ACTGCGTGCCACGTGTTTTCATAGACTCATCCCATG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCAGGTGCAGGTCGCAGTaGGCTGAGATCTTGACACTG +
Preference number: 2 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVRCRSQ*AEILTL
Trigger: CAGTGTCAAGATCTCAGCTCACTGCGACCTGCACCT...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR TCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCAAACTGGGAAAGAAATaGGGCGGCTCAGGTCATGCC +
Preference number: 2 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVKLGKK*GGSGHA
Trigger: GGCATGACCTGAGCCGCCTCATTTCTTTCCCAGTTT...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTGATATTGGACATCCCTaGTGTGTGGTTTCACCTCTC +
Preference number: 2 (lower is better)
Translates to: PEGMPWGWASILGGSRPLDIGHP*CVVSPL
Trigger: GAGAGGTGAAACCACACAGCAGGGATGTCCAATATC...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGGTTGCCAGCATGGGATaGGTCTATGAAAACACGTGG +
Preference number: 2 (lower is better)
Translates to: SRAERATSAKRGTWKGTRVASMG*VYENTW
Trigger: CCACGTGTTTTCATAGACTCATCCCATGCTGGCAAC...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTCCCTTGCAGGGCTGTTaGCAGCATGGGATGAGTCTA +
Preference number: 2 (lower is better)
Translates to: GKAFLATTAEPYPALKFAPLQGC*QHGMSL
Trigger: TAGACTCATCCCATGCTGGCAACAGCCCTGCAAGGG...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGACTCAGGCTGTGGCATaGGTCAGAATTTCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWTQAVA*VRISFL
Trigger: AAGGAAGGAAATTCTGACGCATGCCACAGCCTGAGT...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGTCCACAGTTACCACTaGCAGCCTGGCAAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYVHSYH*QPGKPG
Trigger: GCCAGGCTTGCCAGGCTGCCAGTGGTAACTGTGGAC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCATGGTTTCACCTCTCATaGACTCTGACGGCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSWFHLS*TLTAAV
Trigger: CACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCA...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGCTCTCAGCAACCTTCTaGGCAAAGAACTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: SRAERATSAKRGTWKGTRLSATF*AKNSHL
Trigger: GAGGTGAGAGTTCTTTGCCCAGAAGGTTGCTGAGAG...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CAA 90 bp GCCAAACCAGAGACTGTCTTTGCTGTCTGGTGGCCAAACTGCACGTaGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTGGGTAC +
Preference number: 2 (lower is better)
Translates to: AKPETVFAVWWPNCT*SRGLTPSKLVLSGY
Trigger: GTACCCAGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR TCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCGGCAGGCGGTGCCCTaGGGCACAGGTGGGCGTCTG +
Preference number: 2 (lower is better)
Translates to: QSCATIIPQFHHLPKKARRQAVP*GTGGRL
Trigger: CAGACGCCCACCTGTGCCTCAGGGCACCGCCTGCCG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTGGCAGGAGAATCACTTaGACCTGGGAGATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GKAFLATTAEPYPALKFAGRRIT*TWEMEV
Trigger: AACCTCCATCTCCCAGGTTCAAGTGATTCTCCTGCC...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACATGGACTCTGACGGCTaGTGTGCCTTCTCTGCTCGG +
Preference number: 2 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYMDSDG*CAFSAR
Trigger: CCGAGCAGAGAAGGCACAGCAGCCGTCAGAGTCCAT...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGTGGCAACCACCAATGTaGTTTGTCTCTGATACACAG +
Preference number: 2 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRWQPPM*FVSDTQ
Trigger: CTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCA...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCTGCTTTTCCCTGTCCTaGGTCTGTTCTGTTACATGG +
Preference number: 2 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVCFSLS*VCSVTW
Trigger: CCATGTAACAGAACAGACCCAGGACAGGGAAAAGCA...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGGTCTATGAAAACACGTaGCACGCAGTAGGTCCACAG +
Preference number: 2 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVVYENT*HAVGPQ
Trigger: CTGTGGACCTACTGCGTGCCACGTGTTTTCATAGAC...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTATGGCGAAAAGGTACTaGGGCTTCTCTGGATTCCCC +
Preference number: 2 (lower is better)
Translates to: GKAFLATTAEPYPALKFAMAKRY*GFSGFP
Trigger: GGGGAATCCAGAGAAGCCCCAGTACCTTTTCGCCAT...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGCGTTCCTAACTCAATaGTCTTTCCACCCCACCACC +
Preference number: 2 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGAFLTQ*SFHPTT
Trigger: GGTGGTGGGGTGGAAAGACCATTGAGTTAGGAACGC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCATTAGCCTGCAGATaGGCAGCTGACTCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: PNILYVTEEERAGLIECGPLACR*AADSPV
Trigger: GACTGGGGAGTCAGCTGCTCATCTGCAGGCTAATGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTTTCTCTGGATTCCCCTaGAGACTCAGATGTCGAAGG +
Preference number: 2 (lower is better)
Translates to: GKAFLATTAEPYPALKFAFSGFP*RLRCRR
Trigger: CCTTCGACATCTGAGTCTTCAGGGGAATCCAGAGAA...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGATGCGCTTCGGTGCTaGTGTGAGTCTTGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYDALRC*CESCAL
Trigger: CAGAGCACAAGACTCACAGCAGCACCGAAGCGCATC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCCCTTGCAGGGCTGTTaGCAGCATGGGATGAGTCTA +
Preference number: 2 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYPLQGC*QHGMSL
Trigger: TAGACTCATCCCATGCTGGCAACAGCCCTGCAAGGG...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGCAGCCTGGCAAGCCTaGCAGGGCCCGGACGGCAGA +
Preference number: 2 (lower is better)
Translates to: TKLCNHHSTISSSSKESPAAWQA*QGPDGR
Trigger: TCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGTCTATGAAAACACGTaGCACGCAGTAGGTCCACAG +
Preference number: 2 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGVYENT*HAVGPQ
Trigger: CTGTGGACCTACTGCGTGCCACGTGTTTTCATAGAC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTTGGTTTCACCTCTCATaGACTCTGACGGCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSWFHLS*TLTAAV
Trigger: CACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCA...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGATACCAGCGTCCATTTaGGAGGAAGCCCTCGTGGAT +
Preference number: 2 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKIPASI*EEALVD
Trigger: ATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTAT...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGGCTTCTCTaGATTCCCCTGAAGACTCAG +
Preference number: 2 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKVLGLL*IPLKTQ
Trigger: CTGAGTCTTCAGGGGAATCCAGAGAAGCCCCAGTAC...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGCCAGTTGTAATACCTaGCAAACCCAGAAGACCATG +
Preference number: 2 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGASCNT*QTQKTM
Trigger: CATGGTCTTCTGGGTTTGTCAGGTATTACAACTGGC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCTGGCAACCACCAATGTaGTTTGTCTCTGATACACAG +
Preference number: 2 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVWQPPM*FVSDTQ
Trigger: CTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCA...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAGACATCCCTGCTGTGTaGTTTCACCTCTCATGGACT +
Preference number: 2 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKDIPAV*FHLSWT
Trigger: AGTCCATGAGAGGTGAAACCACACAGCAGGGATGTC...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCTGCTGTGCCTTCTCTaGTCGGCAGGCGGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: QSCATIIPQFHHLPKKARLLCLL*SAGGAL
Trigger: CAGGGCACCGCCTGCCGAGCAGAGAAGGCACAGCAG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCTCGTGGATCTCTTTaGCAAGGCAGTTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: PNILYVTEEERAGLIECGPRGSL*QGSFLG
Trigger: CCCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTTGCTTTTCCCTGTCCTaGGTCTGTTCTGTTACATGG +
Preference number: 2 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSCFSLS*VCSVTW
Trigger: CCATGTAACAGAACAGACCCAGGACAGGGAAAAGCA...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGTTACCACTGGCAGCCTaGCAAGCCTGGCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFELPLAA*QAWQGP
Trigger: CGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGGTAA...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAGGGCTGTTGCCAGCATaGGATGAGTCTATGAAAACA +
Preference number: 2 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKGLLPA*DESMKT
Trigger: TGTTTTCATAGACTCATCCCATGCTGGCAACAGCCC...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGCCCTGAGGCACAGGTaGGCGTCTGGGGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: TKLCNHHSTISSSSKESPALRHR*ASGAGT
Trigger: AGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGAAAAACCCCAAATATaGCCATTTCCTGCCATTAGC +
Preference number: 2 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGEKPQI*PFPAIS
Trigger: GCTAATGGCAGGAAATGGTCATATTTGGGGTTTTTC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTTCCTCTCCTGCCCTGTaGCAGAGCCAAGCCCCTTGC +
Preference number: 2 (lower is better)
Translates to: QSCATIIPQFHHLPKKARSSPAL*QSQAPC
Trigger: GCAAGGGGCTTGGCTCTGCCACAGGGCAGGAGAGGA...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCTCTCCTGCCCTGTaGCAGAGCCAAGCCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TKLCNHHSTISSSSKESPSSPAL*QSQAPC
Trigger: GCAAGGGGCTTGGCTCTGCCACAGGGCAGGAGAGGA...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTTTTGTGTTTTGTGAATaGATGACGCATGAGTGTGCC +
Preference number: 2 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSFVFCE*MTHECA
Trigger: GGCACACTCATGCGTCATTCATTCACAAAACACAAA...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR TCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAATTTGTGTTTTGTGAATaGATGACGCATGAGTGTGCC +
Preference number: 2 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKFVFCE*MTHECA
Trigger: GGCACACTCATGCGTCATTCATTCACAAAACACAAA...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCATGCCTCTGGTGGCTaGTCACCTGACCCCACCTCA +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEHASGG*SPDPTS
Trigger: TGAGGTGGGGTCAGGTGAGCAGCCACCAGAGGCATG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCACAGATTTGCCTATTCTaGACATTTCACATAAACTCG +
Preference number: 2 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSQICLF*TFHINS
Trigger: CGAGTTTATGTGAAATGTCCAGAATAGGCAAATCTG...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGGCAGGCAGATCACCTaGGGTCAGGAGTTCCAGATC +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEGRQIT*GQEFQI
Trigger: GATCTGGAACTCCTGACCTCAGGTGATCTGCCTGCC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGATGGACTCTGACGGCTaGTGTGCCTTCTCTGCTCGG +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEMDSDG*CAFSAR
Trigger: CCGAGCAGAGAAGGCACAGCAGCCGTCAGAGTCCAT...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGTGTTTTGTGAATGAATaGCGCATGAGTGTGCCAAAT +
Preference number: 2 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQCFVNE*RMSVPN
Trigger: ATTTGGCACACTCATGCGTCATTCATTCACAAAACA...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR TCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGAATGTGCTTTGTCTCTaGTACACAGATTTGCCTATT +
Preference number: 2 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGNVLCL*YTDLPI
Trigger: AATAGGCAAATCTGTGTATCAGAGACAAAGCACATT...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGCAGATGCGCTTCGGTaGTGCTGTGAGTCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: QSCATIIPQFHHLPKKARADALR*CCESCA
Trigger: AGCACAAGACTCACAGCAGCACCGAAGCGCATCTGC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGTCTGATACACAGATTTaGCTATTCTGGACATTTCAC +
Preference number: 2 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGSDTQI*LFWTFH
Trigger: GTGAAATGTCCAGAATAGGCAAATCTGTGTATCAGA...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGCCTGGCCAACATGGTaGATCCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEAWPTW*IPVSTK
Trigger: TTTAGTAGAGACGGGGATTCACCATGTTGGCCAGGC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR GCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCGATATTGGACATCCCTaGTGTGTGGTTTCACCTCTC +
Preference number: 2 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFDIGHP*CVVSPL
Trigger: GAGAGGTGAAACCACACAGCAGGGATGTCCAATATC...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTTGCCAGCATGGGATaGGTCTATGAAAACACGTGG +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVASMG*VYENTW
Trigger: CCACGTGTTTTCATAGACTCATCCCATGCTGGCAAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGTGAGTCTTGTGCTCTaGCTTAGGCAGAAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: TKLCNHHSTISSSSKESPVSLVL*LRQKVL
Trigger: CAGGACTTTCTGCCTAAGGCAGAGCACAAGACTCAC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGAAAAACCCCAAATATaGCCATTTCCTGCCATTAGC +
Preference number: 2 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPEKPQI*PFPAIS
Trigger: GCTAATGGCAGGAAATGGTCATATTTGGGGTTTTTC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGGACATTTGGGTTGTTaGTACCGTTTGACTTTTGAG +
Preference number: 2 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPGHLGC*YRLTFE
Trigger: CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTACTCAGGCTGTGGCATaGGTCAGAATTTCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: QSCATIIPQFHHLPKKARTQAVA*VRISFL
Trigger: AAGGAAGGAAATTCTGACGCATGCCACAGCCTGAGT...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTAATGTGCTTTGTCTCTaGTACACAGATTTGCCTATT +
Preference number: 2 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPNVLCL*YTDLPI
Trigger: AATAGGCAAATCTGTGTATCAGAGACAAAGCACATT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGGACATTTGGGTTGTTaGTACCGTTTGACTTTTGAG +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEGHLGC*YRLTFE
Trigger: CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR GCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCTCTGATACACAGATTTaGCTATTCTGGACATTTCAC +
Preference number: 2 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFSDTQI*LFWTFH
Trigger: GTGAAATGTCCAGAATAGGCAAATCTGTGTATCAGA...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCCAGGTATTGTGTGGATaGATGTTTTCAATTCTCTTG +
Preference number: 2 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFQVLCG*MFSILL
Trigger: CAAGAGAATTGAAAACATCCATCCACACAATACCTG...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGAGCACAGGTATTGTGTaGATGGATGTTTTCAATTCT +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFESTGIV*MDVFNS
Trigger: AGAATTGAAAACATCCATCCACACAATACCTGTGCT...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTCTTAATTCATCTGTaGATGGACATTTGGGTTGTT +
Preference number: 2 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVLIHL*MDIWVV
Trigger: AACAACCCAAATGTCCATCCACAGATGAATTAAGAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR TCA 72 bp GGCTGCTGTGCCTTCTCTGCTCGGCAGGCGGTGCCCTaGGGCACAGGTGGGCGTCTGGGGCTGGAACTCTCG +
Preference number: 3 (lower is better)
Translates to: GCCAFSARQAVP*GTGGRLGLELS
Trigger: CGAGAGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGCACCGCCTGCCGAGCAGAGAAGGCACAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 72 bp CTGTGGCGGCCAGGCCCCGTCCTCCAGCTCCAGCGGTaGAGCATGCTCAAATCCCAGGTCCCTGTGAGCGAG +
Preference number: 3 (lower is better)
Translates to: LWRPGPVLQLQR*SMLKSQVPVSE
Trigger: CTCGCTCACAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGAGCTGGAGGACGGGGCCTGGCCGCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp CTTCTCTGCTCGGCAGGCGGTGCCCTGAGGCACAGGTaGGCGTCTGGGGCTGGAACTCTCGCTAGGCGCTAC +
Preference number: 3 (lower is better)
Translates to: LLCSAGGALRHR*ASGAGTLARRY
Trigger: GTAGCGCCTAGCGAGAGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGCACCGCCTGCCGAGCAGAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 72 bp GTAGGTCCACAGTTACCACTGGCAGCCTGGCAAGCCTaGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTG +
Preference number: 3 (lower is better)
Translates to: VGPQLPLAAWQA*QGPDGRCASVL
Trigger: CAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGGTAACTGTGGACCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR TCA 72 bp TCCAGCGGTGCAGCATGCTCAAATCCCAGGTCCCTGTaGGCGAGCGCTCCTCCACTGCCACCACGGACCCCA +
Preference number: 3 (lower is better)
Translates to: SSGAACSNPRSL*ASAPPLPPRTP
Trigger: TGGGGTCCGTGGTGGCAGTGGAGGAGCGCTCGCTCACAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp GGCATCCTGGGGAGCTTGAGCAGGTGCTGGCCAGAGTaGATGGGACCTGTGCGTCCCAGGCAGAGGGCATGG +
Preference number: 3 (lower is better)
Translates to: GILGSLSRCWPE*MGPVRPRQRAW
Trigger: CCATGCCCTCTGCCTGGGACGCACAGGTCCCATTCACTCTGGCCAGCACCTGCTCAAGCTCCCCAGGATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 72 bp GCTCCCACCGTGGCAACGGCCTATGGCATCCCCTTCTaGCAGGACTCCTGTGGGCCTCTTGGCGTTTCTGCC +
Preference number: 3 (lower is better)
Translates to: APTVATAYGIPF*QDSCGPLGVSA
Trigger: GGCAGAAACGCCAAGAGGCCCACAGGAGTCCTGGCAGAAGGGGATGCCATAGGCCGTTGCCACGGTGGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp GGGGAGCATCAGATGACCAACTTCCAGGTCCCACGCTaGCCTCCTTGCTTCCCAGGGCAGGCTGGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: GEHQMTNFQVPR*PPCFPGQAGPV
Trigger: CACAGGGCCAGCCTGCCCTGGGAAGCAAGGAGGCCAGCGTGGGACCTGGAAGTTGGTCATCTGATGCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp GAGGACACTGAAGCGGGAGGTGCATGCTTTACCAGGTaGCCGAGCTGGAGGAGCAGCCCGGGAGGTGTGGCA +
Preference number: 3 (lower is better)
Translates to: EDTEAGGACFTR*PSWRSSPGGVA
Trigger: TGCCACACCTCCCGGGCTGCTCCTCCAGCTCGGCCACCTGGTAAAGCATGCACCTCCCGCTTCAGTGTCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp TCACGGTGGCACATGTCGTATGAGGCAGGGACCGGCTaGTGGGCTGAGGTCAGCAGGGCCAAGGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: SRWHMSYEAGTG*WAEVSRAKVGR
Trigger: TCTGCCCACCTTGGCCCTGCTGACCTCAGCCCATCAGCCGGTCCCTGCCTCATACGACATGTGCCACCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 72 bp GAGTTCTCCTCTCCCCACATTGCTCAGGTGGCCCCGTaGCCAGTCCAGGGAGGAAGCCAGCCACAGTTACCC +
Preference number: 3 (lower is better)
Translates to: EFSSPHIAQVAP*PVQGGSQPQLP
Trigger: GGGTAACTGTGGCTGGCTTCCTCCCTGGACTGGGCACGGGGCCACCTGAGCAATGTGGGGAGAGGAGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp TCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATaGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: STPPPSTLGRES*CPSQPSPCLRA
Trigger: GGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp GCCTCACCAGGCTCCCCTGAAGGCATGCCCTGGGGTTaGGCTTCGATCTTGGGAGGGAGCCGTCCACTTATC +
Preference number: 3 (lower is better)
Translates to: ASPGSPEGMPWG*ASILGGSRPLI
Trigger: GATAAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGGGGAGCCTGGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCGCTGAGAGCGCACCATaGCACTCCAGCCTGGGGGAC +
Preference number: 3 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGAESAP*HSSLGD
Trigger: GTCCCCCAGGCTGGAGTGCAATGGTGCGCTCTCAGC...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCCTGGGAGATGGAGGTaGCAGCCAGCTGAGAGCGCA +
Preference number: 3 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRPGRWR*QPAESA
Trigger: TGCGCTCTCAGCTGGCTGCAACCTCCATCTCCCAGG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp CAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTaGGTCTTGTGCTCTGCCTTAGGCAGAAAGTCCTGG +
Preference number: 3 (lower is better)
Translates to: QGPDGRCASVLL*VLCSALGRKSW
Trigger: CCAGGACTTTCTGCCTAAGGCAGAGCACAAGACTCACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 72 bp TCACCCAGGGCACAGGCAGGGCGTGTGGTCTGCGTGTaGACACGTACAAGTGCACACACACGCCTGTGTGGA +
Preference number: 3 (lower is better)
Translates to: SPRAQAGRVVCV*TRTSAHTRLCG
Trigger: TCCACACAGGCGTGTGTGTGCACTTGTACGTGTGCACACGCAGACCACACGCCCTGCCTGTGCCCTGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp TCACCTGACCCCACCTCACAGGGGTGGCCTATTGCTTaGTCAGCAACTCCAGCCCAGCTCCTGCCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: SPDPTSQGWPIA*SATPAQLLPGQ
Trigger: TTGGCCAGGCAGGAGCTGGGCTGGAGTTGCTGACCAAGCAATAGGCCACCCCTGTGAGGTGGGGTCAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 72 bp TCTGGTGGCTGCTCACCTGACCCCACCTCACAGGGGTaGCCTATTGCTTGGTCAGCAACTCCAGCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: SGGCSPDPTSQG*PIAWSATPAQL
Trigger: GAGCTGGGCTGGAGTTGCTGACCAAGCAATAGGCCACCCCTGTGAGGTGGGGTCAGGTGAGCAGCCACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CAA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGGGGAGGTGTGGCATTTaGAGCTGCCCACCCCACCGC +
Preference number: 3 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASGRCGI*SCPPHR
Trigger: GCGGTGGGGTGGGCAGCTCAAAATGCCACACCTCCC...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCTGGTGAGTCTGCCCTaGCCTCACCAGGCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVLVSLP*PHQAPL
Trigger: CAGGGGAGCCTGGTGAGGCAAGGGCAGACTCACCAG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 72 bp CTCAACCTCCCACTGCACATCCATGCCTCTGGTGGCTaGTCACCTGACCCCACCTCACAGGGGTGGCCTATT +
Preference number: 3 (lower is better)
Translates to: LNLPLHIHASGG*SPDPTSQGWPI
Trigger: AATAGGCCACCCCTGTGAGGTGGGGTCAGGTGAGCAGCCACCAGAGGCATGGATGTGCAGTGGGAGGTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 72 bp AACTCGGTGTCCTCAGGAGCCCAGGTCCTCCCCTGGTaGCTGACACAGCTCCCTCATCTGCTTCTCACAGCA +
Preference number: 3 (lower is better)
Translates to: NSVSSGAQVLPW*LTQLPHLLLTA
Trigger: TGCTGTGAGAAGCAGATGAGGGAGCTGTGTCAGGCACCAGGGGAGGACCTGGGCTCCTGAGGACACCGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp AAGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTaGGAGGAAGCCCTCGTGGATCTCTTTGCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: KKGGVGPIPASI*EEALVDLFAKA
Trigger: TGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp GCAGACGGCAAAAGACAAAAGCCAGTCTGCCGGCGATaGCGGGAAGATGACAGTGATCGGGCCCACGGTGAC +
Preference number: 3 (lower is better)
Translates to: ADGKRQKPVCRR*REDDSDRAHGD
Trigger: GTCACCGTGGGCCCGATCACTGTCATCTTCCCGCCATCGCCGGCAGACTGGCTTTTGTCTTTTGCCGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGGCATCCTGGGGAGCTaGAGCAGGTGCTGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGGILGS*SRCWPE
Trigger: CTCTGGCCAGCACCTGCTCAAGCTCCCCAGGATGCC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 72 bp CCTTCCTTCCTCCCACCACCAACTGAGCGTGCACCATaGACCCGCCACCATGCTGTGTGTAGTGGACAACGA +
Preference number: 3 (lower is better)
Translates to: PSFLPPPTERAP*TRHHAVCSGQR
Trigger: TCGTTGTCCACTACACACAGCATGGTGGCGGGTGCATGGTGCACGCTCAGTTGGTGGTGGGAGGAAGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCCATACCAGCGTCCATTaGGGAGGAAGCCCTCGTGGA +
Preference number: 3 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVHTSVH*GGSPRG
Trigger: TCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATG...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 72 bp CAAGCCTCATGCAGCCCACATGCTCTAAAGGGCTCCTaGCTCACTCCTTGTGCCTCAACCTCCCACTGCACA +
Preference number: 3 (lower is better)
Translates to: QASCSPHALKGS*LTPCASTSHCT
Trigger: TGTGCAGTGGGAGGTTGAGGCACAAGGAGTGAGGCAGGAGCCCTTTAGAGCATGTGGGCTGCATGAGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 72 bp CGCAAACAAGCAGACGGCAAAAGACAAAAGCCAGTCTaGCGGCGATGGCGGGAAGATGACAGTGATCGGGCC +
Preference number: 3 (lower is better)
Translates to: RKQADGKRQKPV*RRWREDDSDRA
Trigger: GGCCCGATCACTGTCATCTTCCCGCCATCGCCGGCAGACTGGCTTTTGTCTTTTGCCGTCTGCTTGTTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 72 bp TACTTTACAGATGAGGACACTGAAGCGGGAGGTGCATaGTTTACCAGGTGGCCGAGCTGGAGGAGCAGCCCG +
Preference number: 3 (lower is better)
Translates to: YFTDEDTEAGGA*FTRWPSWRSSP
Trigger: CGGGCTGCTCCTCCAGCTCGGCCACCTGGTAAAGCATGCACCTCCCGCTTCAGTGTCCTCATCTGTAAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp AACTCAATGGTCTTTCCACCCCACCACCGTCCACGTTaGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTC +
Preference number: 3 (lower is better)
Translates to: NSMVFPPHHRPR*AGSHGVHPNRL
Trigger: GAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp AGCCAAGCCCCTTGCAGGGCTGTTGCCAGCATGGGATaGGTCTATGAAAACACGTGGCACGCAGTAGGTCCA +
Preference number: 3 (lower is better)
Translates to: SQAPCRAVASMG*VYENTWHAVGP
Trigger: TGGACCTACTGCGTGCCACGTGTTTTCATAGACTCATCCCATGCTGGCAACAGCCCTGCAAGGGGCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR TCA 72 bp AGGCCAGTTGTAATACCTGACAAACCCAGAAGACCATaGAGAAGGGCGGGGTGGGGCCCATACCAGCGTCCA +
Preference number: 3 (lower is better)
Translates to: RPVVIPDKPRRP*RRAGWGPYQRP
Trigger: TGGACGCTGGTATGGGCCCCACCCCGCCCTTCTTCATGGTCTTCTGGGTTTGTCAGGTATTACAACTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp TTGGTGCTTCCATCTGTGAAACGGGGGAGCATCAGATaGCCAACTTCCAGGTCCCACGCTGGCCTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: LVLPSVKRGSIR*PTSRSHAGLLA
Trigger: AGCAAGGAGGCCAGCGTGGGACCTGGAAGTTGGTCATCTGATGCTCCCCCGTTTCACAGATGGAAGCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCCCCTTGCAGGGCTGTaGCCAGCATGGGATGAGTCT +
Preference number: 3 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYPLAGL*PAWDES
Trigger: AGACTCATCCCATGCTGGCAACAGCCCTGCAAGGGG...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR-3UTR CAA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGCCTTGTCTCAGGGCCTaGGTGCTTCCATCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASPCLRA*VLPSVK
Trigger: TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGG...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp CCCTTGCAGGGCTGTTGCCAGCATGGGATGAGTCTATaGAAACACGTGGCACGCAGTAGGTCCACAGTTACC +
Preference number: 3 (lower is better)
Translates to: PLQGCCQHGMSL*KHVARSRSTVT
Trigger: GGTAACTGTGGACCTACTGCGTGCCACGTGTTTTCATAGACTCATCCCATGCTGGCAACAGCCCTGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 72 bp ATATTGGACATCCCTGCTGTGTGGTTTCACCTCTCATaGACTCTGACGGCTGCTGTGCCTTCTCTGCTCGGC +
Preference number: 3 (lower is better)
Translates to: ILDIPAVWFHLS*TLTAAVPSLLG
Trigger: GCCGAGCAGAGAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATGTCCAATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 72 bp TGCCTGGCCAAACCAGAGACTGTCTTTGCTGTCTGGTaGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCT +
Preference number: 3 (lower is better)
Translates to: CLAKPETVFAVW*PNCTLSRGLTP
Trigger: AGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 72 bp TCCTGCCTGGCCAAACCAGAGACTGTCTTTGCTGTCTaGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACT +
Preference number: 3 (lower is better)
Translates to: SCLAKPETVFAV*WPNCTLSRGLT
Trigger: AGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTTGGCCAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 72 bp ATCCTCCGTGGCGAGGATCATGAAAGAGGAGGTGGGTaGCCCAGTAAGACATCATGGCGAAAAGGTACTGGG +
Preference number: 3 (lower is better)
Translates to: ILRGEDHERGGG*PSKTSWRKGTG
Trigger: CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGCCACGGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CCA 72 bp CACGTACAAGTGCACACACACGCCTGTGTGGAGCCCTaGCAGGCAGAGACTAACCCAAAGCCTTTCTTAACC +
Preference number: 3 (lower is better)
Translates to: HVQVHTHACVEP*QAETNPKPFLT
Trigger: GGTTAAGAAAGGCTTTGGGTTAGTCTCTGCCTGCCAGGGCTCCACACAGGCGTGTGTGTGCACTTGTACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAACCCTCGTGGATCTCTTaGCCAAGGCAGTTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKPSWIS*PRQFLG
Trigger: CCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGG...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp CTGTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTaGCTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTC +
Preference number: 3 (lower is better)
Translates to: LSGGQTARCPEV*LLPSWSFLGTF
Trigger: GAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR GCA 72 bp TTCTTGACACAGAAACCAAGCCTCATGCAGCCCACATaGTCTAAAGGGCTCCTGCCTCACTCCTTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: FLTQKPSLMQPT*SKGLLPHSLCL
Trigger: GAGGCACAAGGAGTGAGGCAGGAGCCCTTTAGAGCATGTGGGCTGCATGAGGCTTGGTTTCTGTGTCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 72 bp CATCTGCTTCTCACAGCACATCTGCGAGGACAGGACTaGCCGTGTACTTTACAGATGAGGACACTGAAGCGG +
Preference number: 3 (lower is better)
Translates to: HLLLTAHLRGQD*PCTLQMRTLKR
Trigger: CCGCTTCAGTGTCCTCATCTGTAAAGTACACGGCCAGTCCTGTCCTCGCAGATGTGCTGTGAGAAGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR TCA 72 bp GACAGCGCTTGGGGTCCATCGGACATGCCTGTTCGGTaGGAAAACACTCTGTCCTCTGTTCTAAGCACATCT +
Preference number: 3 (lower is better)
Translates to: DSAWGPSDMPVR*ENTLSSVLSTS
Trigger: AGATGTGCTTAGAACAGAGGACAGAGTGTTTTCTCACCGAACAGGCATGTCCGATGGACCCCAAGCGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR GCA 72 bp CAGATGCGCTTCGGTGCTGCTGTGAGTCTTGTGCTCTaGCTTAGGCAGAAAGTCCTGGGTTTGTGTTTTGTG +
Preference number: 3 (lower is better)
Translates to: QMRFGAAVSLVL*LRQKVLGLCFV
Trigger: CACAAAACACAAACCCAGGACTTTCTGCCTAAGGCAGAGCACAAGACTCACAGCAGCACCGAAGCGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 72 bp AAACCAGAGACTGTCTTTGCTGTCTGGTGGCCAAACTaGACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: KPETVFAVWWPN*TLSRGLTPSKL
Trigger: CAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 72 bp CTGTTGAAAGTGAATAAAGAACGTCCGGATTTCCTTTaGGTGGACGGTGATGATGGGGCCTCCTGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: LLKVNKERPDFL*VDGDDGASWWP
Trigger: AGGCCACCAGGAGGCCCCATCATCACCGTCCACCCAAAGGAAATCCGGACGTTCTTTATTCACTTTCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGATCTGTGGATGGACATTaGGGTTGTTGCTACCGTTTG +
Preference number: 3 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGSVDGH*GCCYRL
Trigger: CAAACGGTAGCAACAACCCAAATGTCCATCCACAGA...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CAA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGAGTATATTCACAAAGTaGTGCAACCATCATTCCACA +
Preference number: 3 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWSIFTK*CNHHST
Trigger: TGTGGAATGATGGTTGCACAACTTTGTGAATATACT...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACTCTGTGGATGGACATTaGGGTTGTTGCTACCGTTTG +
Preference number: 3 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYSVDGH*GCCYRL
Trigger: CAAACGGTAGCAACAACCCAAATGTCCATCCACAGA...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR CCA 72 bp TTAGCTGTCATGCCTCTTCTCTCTTCCTCCAGTACCTaGCAACCACCAATGTGCTTTGTCTCTGATACACAG +
Preference number: 3 (lower is better)
Translates to: LAVMPLLSSSST*QPPMCFVSDTQ
Trigger: CTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCAGGTACTGGAGGAAGAGAGAAGAGGCATGACAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR CCA 72 bp GTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTaGGTACTTTCCTTCAGCCCTAGAGTACCAAATAAT +
Preference number: 3 (lower is better)
Translates to: VQRSDSFQAGPF*VLSFSPRVPNN
Trigger: ATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
3UTR TCA 72 bp CATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTaGCTTTTGAGTAATGCTGCTATGAACGCGGGAGCA +
Preference number: 3 (lower is better)
Translates to: HLWMDIWVVATV*LLSNAAMNAGA
Trigger: TGCTCCCGCGTTCATAGCAGCATTACTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 72 bp CTTCTCTCTTCCTCCAGTACCTGGCAACCACCAATGTaGTTTGTCTCTGATACACAGATTTGCCTATTCTGG +
Preference number: 3 (lower is better)
Translates to: LLSSSSTWQPPM*FVSDTQICLFW
Trigger: CCAGAATAGGCAAATCTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCAGGTACTGGAGGAAGAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR TCA 72 bp CTCCAGTACCTGGCAACCACCAATGTGCTTTGTCTCTaGTACACAGATTTGCCTATTCTGGACATTTCACAT +
Preference number: 3 (lower is better)
Translates to: LQYLATTNVLCL*YTDLPILDISH
Trigger: ATGTGAAATGTCCAGAATAGGCAAATCTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCAGGTACTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR GCA 72 bp TCTGTTCTAAGCACATCTGTTAGGTGTTTTGTGACTTaGAGCCAAACTCACTGCGTTCCTAACTCAATGGTC +
Preference number: 3 (lower is better)
Translates to: SVLSTSVRCFVT*SQTHCVPNSMV
Trigger: GACCATTGAGTTAGGAACGCAGTGAGTTTGGCTGCAAGTCACAAAACACCTAACAGATGTGCTTAGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR-3UTR CAA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTTTAATAGTTCTGATATaGGACATCCCTGCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: QSCATIIPQFHHLPKKARLIVLI*DIPAVW
Trigger: CCACACAGCAGGGATGTCCAATATCAGAACTATTAA...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
3UTR-3UTR CAA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGAACCACCAATGTGCTTaGTCTCTGATACACAGATTT +
Preference number: 3 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFENHQCA*SLIHRF
Trigger: AAATCTGTGTATCAGAGACAAAGCACATTGGTGGTT...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTCCTGCTCCACAGCGATaGACCGGCGCTGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCPAPQR*TGAAGR
Trigger: GCGGCCAGCAGCGCCGGTTCATCGCTGTGGAGCAGG...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGTCCTGCATCGGAGCTaGCCGCCATGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVVLHRS*PPWVPG
Trigger: CCCAGGCACCCATGGCGGCCAGCTCCGATGCAGGAC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGCAGCCTGGCAAGCCTaGCAGGGCCCGGACGGCAGA +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCAAWQA*QGPDGR
Trigger: TCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTACCACGGGCCTGTGCTaGAGCGCCAGTGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCTTGLC*SASALL
Trigger: GAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGT...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTGCGAGGGCACTGGGTaGCCCGCCTCATCTGTGACG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVCEGTG*PASSVT
Trigger: CGTCACAGATGAGGCGGGCCACCCAGTGCCCTCGCA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTTGCTGCTGGGGTCCTaGGAGCTTCGGCGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVLLLGS*ELRRSP
Trigger: GGGACTGCGCCGAAGCTCCCAGGACCCCAGCAGCAA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGCCCAGGTCCTCCCCTaGTGCCTGACACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVAQVLP*CLTQLP
Trigger: AGGGAGCTGTGTCAGGCACCAGGGGAGGACCTGGGC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGAATCCCAGGTCCCTGTaGGCGAGCGCTCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVNPRSL*ASAPPL
Trigger: CAGTGGAGGAGCGCTCGCTCACAGGGACCTGGGATT...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGACGGACCCCAGCGCCTaGAGCACAGCCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVTDPSA*STASRF
Trigger: GAATCTGGAGGCTGTGCTGCAGGCGCTGGGGTCCGT...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGGGCAGGCTGGCCCTGTaGTGGGCACTGGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWGRLAL*WALVPA
Trigger: GGCGGGTACCAGTGCCCAGCACAGGGCCAGCCTGCC...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTCCAGCGCAAATAGGGTaGGCGTCGTGGCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCPAQIG*ASWQRR
Trigger: GCGCCTCTGCCACGACGCCCACCCTATTTGCGCTGG...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCCCTCTGCTTCACGTTaGCCACCAGGGCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVPSASR*PPGPRH
Trigger: ATGCCGAGGCCCTGGTGGCCAACGTGAAGCAGAGGG...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGTGGCTCCCACCGTaGCAACGGCCTATGGCATCC +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVLWLPP*QRPMAS
Trigger: GGATGCCATAGGCCGTTGCCACGGTGGGAGCCACAG...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGCTGGAGATGCCATGTaGCCGCTCCGACAGCAACAC +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVAGDAM*PLRQQH
Trigger: GTGTTGCTGTCGGAGCGGGCACATGGCATCTCCAGC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTAGGCGGCTCAGGTCATaGCTTCTGGGGAGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCRRLRS*LLGRER
Trigger: ACGCTCCCTCCCCAGAAGGCATGACCTGAGCCGCCT...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTCAGCCCACGTCCATGTaGCTGTGGGGCACCACGAAG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCQPTSM*LWGTTK
Trigger: CTTCGTGGTGCCCCACAGCCACATGGACGTGGGCTG...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTTCCAGGGGGCCGGCTTaGTACTCCTGCTCTATCCGG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCSRGPA*YSCSIR
Trigger: CCGGATAGAGCAGGAGTACCAAGCCGGCCCCCTGGA...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTCTTGTCACCCAGGCTaGAGTGCAGAGGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVSCHPG*SAEAEV
Trigger: GACCTCCGCCTCTGCACTCCAGCCTGGGTGACAAGA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGGGACTCAGTCCCAGTaGTGGCATCATGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVGTQSQ*WHHGAG
Trigger: TCCAGCACCATGATGCCATCACTGGGACTGAGTCCC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGTGGCACATGTCGTATaGGGCAGGGACCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCVAHVV*GRDRLM
Trigger: CATCAGCCGGTCCCTGCCTCATACGACATGTGCCAC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTATGTCCTGCAGGTCCTaGATCGGAGCTGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCMSCRS*IGAGRH
Trigger: ATGGCGGCCAGCTCCGATGCAGGACCTGCAGGACAT...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCCAGCCGGCTCCTGGGTaGCCTCTTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSQPAPG*PLGPLQ
Trigger: CTGCAGGGGCCCAAGAGGGCACCCAGGAGCCGGCTG...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGGCCAAATTGAAGGGTaGTCGCCACAGTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCGQIEG*SPQWQP
Trigger: CGGCTGCCACTGTGGCGAGCACCCTTCAATTTGGCC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTCCAGCTCCAGCGGTaGAGCATGCTCAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVLQLQR*SMLKSQ
Trigger: CTGGGATTTGAGCATGCTGCACCGCTGGAGCTGGAG...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGCTCCTCTCCCCACATTaGTCAGGTGGCCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWLLSPH*SGGPVP
Trigger: GGGCACGGGGCCACCTGAGCAATGTGGGGAGAGGAG...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGCATGGCTGTTGATGTaGTCCAGCAGCGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVAWLLM*SSSGSM
Trigger: CATGGACCCGCTGCTGGACCACATCAACAGCCATGC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGATGGGTGCCTGGGGCTaGAGCTCATCTAGGACGATG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVMGAWG*SSSRTM
Trigger: CATCGTCCTAGATGAGCTCCAGCCCCAGGCACCCAT...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTACTCCAGGAATTCCTaGGTCACGCGCACCGTTCGG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVYSRNS*VTRTVR
Trigger: CCGAACGGTGCGCGTGACCCAGGAATTCCTGGAGTA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGGCCCTGAGGCACAGGTaGGCGTCTGGGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWALRHR*ASGAGT
Trigger: AGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGC...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTTTCACTGTCACTGGCTaGGACAGGACTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCFTVTG*DRTGSS
Trigger: CGAGGACCCAGTCCTGTCTCAGCCAGTGACAGTGAA...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGCTTCGGTGCTGCTGTaGGTCTTGTGCTCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVASVLL*VLCSAL
Trigger: TAAGGCAGAGCACAAGACTCACAGCAGCACCGAAGC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGTCACAGCCTCGTCATaGATGACCTGGCCTCCGATG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCVTASS*MTWPPM
Trigger: CATCGGAGGCCAGGTCATGCATGACGAGGCTGTGAC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGGCCCCTTCAGTGAGCTaGGGGACGTGTAGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWAPSVS*GTCRSP
Trigger: CGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGC...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGCAGATGCGCTTCGGTaGTGCTGTGAGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVADALR*CCESCA
Trigger: AGCACAAGACTCACAGCAGCACCGAAGCGCATCTGC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCCCTTGCAGGGCTGTTaGCAGCATGGGATGAGTCTA +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVPLQGC*QHGMSL
Trigger: TAGACTCATCCCATGCTGGCAACAGCCCTGCAAGGG...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGCCTCAACCTCCCACTaGACATCCATGCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCASTSH*TSMPLV
Trigger: CACCAGAGGCATGGATGTGCAGTGGGAGGTTGAGGC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTACGGACCCCAGCGCCTaGAGCACAGCCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLTDPSA*STACRE
Trigger: CTCCCTGCAGGCTGTGCTGCAGGCGCTGGGGTCCGT...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCATGGGGCCGGCGGACTaGACCCCTGGCGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVMGPAD*TPGGRS
Trigger: GCTGCGACCGCCAGGGGTCCAGTCCGCCGGCCCCAT...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGATAGGGTGGGCGTCGTaGCAGAGGCGCCAAACGGGT +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWIGWAS*QRRQTG
Trigger: ACCCGTTTGGCGCCTCTGCCACGACGCCCACCCTAT...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCGTCCGGATTTCCTTTaGGTGGACGGTGATGATGGG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVRPDFL*VDGDDG
Trigger: CCCATCATCACCGTCCACCCAAAGGAAATCCGGACG...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGCCCCGTAGAGGGGCCTaGGTGTGGACCCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWPRRGA*VWTLDC
Trigger: ACAATCCAGGGTCCACACCCAGGCCCCTCTACGGGG...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTAGGGCAAGGCCTTTCTaGCCACTACTGCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCRARPF*PLLLSP
Trigger: AGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCCCT...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGAGCCGAGGTGGGCATTaGAGCCCGCCAGCGCAAATA +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWSRGGH*SPPAQI
Trigger: TATTTGCGCTGGCGGGCTTCAATGCCCACCTCGGCT...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTAGATGGGGTCTCTGTTaGGTTCTGGATCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCRWGLC*VLDLRG
Trigger: CCCTCGCAGATCCAGAACTCAACAGAGACCCCATCT...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGCTTCGGTGCTGCTGTaGGTCTTGTGCTCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCASVLL*VLCSAL
Trigger: TAAGGCAGAGCACAAGACTCACAGCAGCACCGAAGC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCCGGCAGGCGGTGCCCTaGGGCACAGGTGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFRQAVP*GTGGRL
Trigger: CAGACGCCCACCTGTGCCTCAGGGCACCGCCTGCCG...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTGGTGCTTCCATCTGTaGAACGGGGGAGCATCAGAT +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVWCFHL*NGGASD
Trigger: ATCTGATGCTCCCCCGTTTCACAGATGGAAGCACCA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGGCGATGAACCGGCGCTaGTGGCCGCGGGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRAMNRR*WPRASS
Trigger: AGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCATCGC...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGATCTGGTCATCAAGGTaGGTCACAGCCTCGTCATGC +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVIWSSR*VTASSC
Trigger: GCATGACGAGGCTGTGACGCACCTTGATGACCAGAT...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCAGCCCCCGGGCCTCCTaGATGGCTGCCTTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGSPRAS*MAAFRS
Trigger: CGACCTGAAGGCAGCCATGCAGGAGGCCCGGGGGCT...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTCGAGGCCAGGTGCGTTaGGTACATGTCTCTCACCTT +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCRGQVR*VHVSHL
Trigger: AAGGTGAGAGACATGTACGCAACGCACCTGGCCTCG...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGACCACGGGCCTGTGCTaGAGCGCCAGTGCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRTTGLC*SASALL
Trigger: GAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCACCTGCCCGCATGGCTaGTGCGTCTCCTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSTCPHG*CVSSAC
Trigger: GCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGT...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCTTACCACTGGCAGCCTaGCAAGCCTGGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSLPLAA*QAWQGP
Trigger: CGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGGTAA...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCACCAGGTGGCCGAGCTaGAGGAGCAGCCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGTRWPS*RSSPGG
Trigger: ACCTCCCGGGCTGCTCCTCCAGCTCGGCCACCTGGT...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTGATTTCCTGCCGCTCTaGGAGGGATGGGGACCCTCG +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLDFLPL*EGWGPS
Trigger: CGAGGGTCCCCATCCCTCTCAGAGCGGCAGGAAATC...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTTTTTGCCATCCTCCATaGAGGCCGACTGAACCATGG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCFCHPP*RPTEPW
Trigger: CCATGGTTCAGTCGGCCTTCATGGAGGATGGCAAAA...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCAGCAACAGGAGCGGTaGCAGCAGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGQQQER*QQRQPA
Trigger: TGCTGGCTGCCGCTGCTGGCACCGCTCCTGTTGCTG...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGGGCCTCCTGCATGGCTaGCTTCAGGTCGTAGTCGAT +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWGLLHG*LQVVVD
Trigger: ATCGACTACGACCTGAAGGCAGCCATGCAGGAGGCC...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGCAGGGCCAGAGGACGTaGGGTGTCCGGAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRQGQRT*GVRNQA
Trigger: CGCCTGGTTCCGGACACCGCACGTCCTCTGGCCCTG...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCCCCAGCGTGGCATACTaGACCGAGACACCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSPSVAY*TETPSS
Trigger: CGAGCTCGGTGTCTCGGTGCAGTATGCCACGCTGGG...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCCAGCCGGCTCCTGGGTaGCCTCTTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFQPAPG*PLGPLQ
Trigger: CTGCAGGGGCCCAAGAGGGCACCCAGGAGCCGGCTG...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGAGCCGGGAGCGGATTaGATACGTGTAATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCEPGAD*IRVILC
Trigger: GCACAGAATTACACGTATGCAATCCGCTCCCGGCTC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGAGCGTCACGGCCTCTTaGTGCTGGGGTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWSVTAS*CWGPGS
Trigger: GCTCCCAGGACCCCAGCAGCAAGAGGCCGTGACGCT...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCGAGCGCTCCTCCACTaGCACCACGGACCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVRALLH*HHGPQR
Trigger: GCGCTGGGGTCCGTGGTGGCAGTGGAGGAGCGCTCG...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGTGAGTCTTGTGCTCTaGCTTAGGCAGAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVVSLVL*LRQKVL
Trigger: CAGGACTTTCTGCCTAAGGCAGAGCACAAGACTCAC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGATGGGGCCGGCGGACTaGACCCCTGGCGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWMGPAD*TPGGRS
Trigger: GCTGCGACCGCCAGGGGTCCAGTCCGCCGGCCCCAT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCATAGGGTGGGCGTCGTaGCAGAGGCGCCAAACGGGT +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSIGWAS*QRRQTG
Trigger: ACCCGTTTGGCGCCTCTGCCACGACGCCCACCCTAT...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCGGAGCTGGCCGCCATaGGTGCCTGGGGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVRSWPP*VPGAGA
Trigger: AGCTCCAGCCCCAGGCACCCATGGCGGCCAGCTCCG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTTGCTGTGCATCAGGTTaGTATCCTGGTCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCCCASG*YPGRAA
Trigger: TGCTGCTCGACCAGGATACCAACCTGATGCACAGCA...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCTTCCACAGCCGCCGGTaGAGCATGACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSFHSRR*SMTSTC
Trigger: GCAGGTGGAGGTCATGCTCCACCGGCGGCTGTGGAA...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGTCTTTGCTGTCTGGTaGCCAAACTGCACGTTGTCC +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCVFAVW*PNCTLS
Trigger: GGACAACGTGCAGTTTGGCCACCAGACAGCAAAGAC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGCCCTGGCTTATGGTCTaGATGGGGGTGGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWPWLMV*MGVGKF
Trigger: GAACTTCCCCACCCCCATCCAGACCATAAGCCAGGG...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTCTCAGCAACCTTCTaGGCAAAGAACTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVLSATF*AKNSHL
Trigger: GAGGTGAGAGTTCTTTGCCCAGAAGGTTGCTGAGAG...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTCCCTGTGCTGGGCACTaGTACCCGCCATGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLPCAGH*YPPWPR
Trigger: TCTAGGCCATGGCGGGTACCAGTGCCCAGCACAGGG...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGGTCTGGAAAAGTCTGTaGAGCAGGAGGGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWVWKSL*SRRAGG
Trigger: ACCCCCAGCCCTCCTGCTCCACAGACTTTTCCAGAC...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCGCAGCCCGGGAGGTGTaGCATTTTGAGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSAAREV*HFELPT
Trigger: GGTGGGCAGCTCAAAATGCCACACCTCCCGGGCTGC...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAGAGGCAGGGACCGGCTaGTGGGCTGAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSEAGTG*WAEVSR
Trigger: CCTGCTGACCTCAGCCCATCAGCCGGTCCCTGCCTC...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCCTCACCAGGCTCCCCTaGAGGCATGCCCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVLTRLP*RHALGL
Trigger: CAACCCCAGGGCATGCCTTCAGGGGAGCCTGGTGAG...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGGCAGCCAGCACAGCTaGCCCATCCCTGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGGSQHS*PIPAAG
Trigger: GCCTGCCGCAGGGATGGGGCAGCTGTGCTGGCTGCC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCAGGGCCAGAGGACGTaGGGTGTCCGGAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVQGQRT*GVRNQA
Trigger: CGCCTGGTTCCGGACACCGCACGTCCTCTGGCCCTG...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCGTGATGGCATCATGGTaGTGGACCTCGGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSVMASW*WTSETA
Trigger: GGCCGTCTCCGAGGTCCAGCACCATGATGCCATCAC...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTCTGTCTCTCCCAGATaGTGTGCATCAGGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVSVSPR*CASGWY
Trigger: ATACCAACCTGATGCACAGCATCTGGGAGAGACAGA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCGCTGGAGATGCCATGTaGCCGCTCCGACAGCAACAC +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSAGDAM*PLRQQH
Trigger: GTGTTGCTGTCGGAGCGGGCACATGGCATCTCCAGC...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGTGCTGCAGCGCCAGTaGGCTCCTCTGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGVLQRQ*APLAQG
Trigger: GCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCAC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCAGCACCACGGGCCTGTaGTGCAGCGCCAGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVSTTGL*CSASAL
Trigger: GAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCT...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCGAGCGCTCCTCCACTaGCACCACGGACCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWRALLH*HHGPQR
Trigger: GCGCTGGGGTCCGTGGTGGCAGTGGAGGAGCGCTCG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGGGCGGACTGGACCCCTaGCGGTCGCAGCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASGGLDP*RSQQQE
Trigger: CTCCTGTTGCTGCGACCGCCAGGGGTCCAGTCCGCC...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTTCGTCATGCATGACCTaGCCTCCGATGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCSSCMT*PPMTNS
Trigger: GGAATTTGTCATCGGAGGCCAGGTCATGCATGACGA...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCCCAGCGCAAATAGGGTaGGCGTCGTGGCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVPAQIG*ASWQRR
Trigger: GCGCCTCTGCCACGACGCCCACCCTATTTGCGCTGG...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGCGTCCAGGCCTGGAATaGTTCTGTGGAATAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWRPGLE*FCGIGQ
Trigger: CTGCCCTATTCCACAGAACCATTCCAGGCCTGGACG...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGCTGCAGGGCCCAGGTaGGGTCCAGATGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWAAGPR*GPDAHG
Trigger: CCCGTGGGCATCTGGACCCCACCTGGGCCCTGCAGC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGTGGCAGCCGGCTCCTaGGTGCCCTCTTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWVAAGS*VPSWAP
Trigger: AGGGGCCCAAGAGGGCACCCAGGAGCCGGCTGCCAC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCTTGCTGCTGGGGTCCTaGGAGCTTCGGCGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVLLLGS*ELRRSP
Trigger: GGGACTGCGCCGAAGCTCCCAGGACCCCAGCAGCAA...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGCGGCGGAGGTCAGCCTaGGCTTCCCCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASRRRSA*ASPRWP
Trigger: AGGCCATCGAGGGGAAGCCCAGGCTGACCTCCGCCG...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCGTGGTGTCACCTCTGTaGCGGCCAGGCCCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVVVSPL*RPGPVL
Trigger: GAGGACGGGGCCTGGCCGCCACAGAGGTGACACCAC...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCTCAGGTCATGCCTTCTaGGGAGGGAGCGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGSGHAF*GGSVGR
Trigger: CCTGCCCACGCTCCCTCCCCAGAAGGCATGACCTGA...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGGCTGGCCAGAGTGAATaGGACCTGTGCGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWAGQSE*DLCVPG
Trigger: GCCTGGGACGCACAGGTCCCATTCACTCTGGCCAGC...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCCGTGGCAACGGCCTATaGCATCCCCTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSRGNGL*HPLLPG
Trigger: TCCTGGCAGAAGGGGATGCCATAGGCCGTTGCCACG...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CAA 72 bp GAAGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTaGGGAGGAAGCCCTCGTGGATCTCTTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: EEGRGGAHTSVH*GGSPRGSLCQG
Trigger: GCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAACCTGCTCCACAGCGATaGACCGGCGCTGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKPAPQR*TGAAGR
Trigger: GCGGCCAGCAGCGCCGGTTCATCGCTGTGGAGCAGG...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCGGCAGGTGGATCACCTaGAGTCAGGGGTTCGTGACC +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGGRWIT*SQGFVT
Trigger: GGTCACGAACCCCTGACTTCAGGTGATCCACCTGCC...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTGGAGCAGAGGGAGAGTaGGCTGCACCAAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLGAEGE*AAPSSR
Trigger: TCTGGAACTTGGTGCAGCTCACTCTCCCTCTGCTCC...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCAACCAGGCGGCCCTCTaGTTCACGTTGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVNQAAL*FTLATR
Trigger: CCTGGTGGCCAACGTGAAGCAGAGGGCCGCCTGGTT...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGTTGAGTTCTGGATCTaGGAGGGCACTGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRVEFWI*EGTGWP
Trigger: GGGCCACCCAGTGCCCTCGCAGATCCAGAACTCAAC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCTGCGTCTCCTCAGCCTaGGGCCAAATTGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSCVSSA*GQIEGC
Trigger: GCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCA...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTGTGCTGCAGCGCCAGTaGGCTCCTCTGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSVLQRQ*APLAQG
Trigger: GCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCAC...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTAGCGCCAGCCAGGGATaGTCAGGATCTGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLSASQG*SGSAGE
Trigger: TTCACCTGCAGATCCTGAGCATCCCTGGCTGGCGCT...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTCTCCAGCTCCAGCGGTaGAGCATGCTCAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLLQLQR*SMLKSQ
Trigger: CTGGGATTTGAGCATGCTGCACCGCTGGAGCTGGAG...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGCCCATCCCTCCGCACTaGTTTTCCCTGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWPIPPH*FSLSWV
Trigger: GACCCAGGACAGGGAAAAGCAGTGCGGAGGGATGGG...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGCTCAGGTGGCCCCGTaGCCAGTCCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWAQVAP*PVQGGS
Trigger: GCTTCCTCCCTGGACTGGGCACGGGGCCACCTGAGC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCCAGCCCACGTCCATGTaGCTGTGGGGCACCACGAAG +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVQPTSM*LWGTTK
Trigger: CTTCGTGGTGCCCCACAGCCACATGGACGTGGGCTG...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAATGAACCGGCGCTGCTaGCCGCGGGCCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGMNRRC*PRASSS
Trigger: GGAAGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCAT...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTACCTGGTATTTCTGCTaGTCCGAGGCGACGCCATCC +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLTWYFC*SEATPS
Trigger: GGATGGCGTCGCCTCGGACCAGCAGAAATACCAGGT...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGGTGCCAGGAGAACTGTaGCCGGATCCCAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWVPGEL*PDPKCF
Trigger: GAAACATTTGGGATCCGGCCACAGTTCTCCTGGCAC...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCATCCGGGAGCCGAGGTaGGCATTGAAGCCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFIREPR*ALKPAS
Trigger: GCTGGCGGGCTTCAATGCCCACCTCGGCTCCCGGAT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCACATACAACAAGGCGCTaGCTCGCCGGGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSHTTRR*LAGPAP
Trigger: AGGGGCTGGCCCGGCGAGCCAGCGCCTTGTTGTATG...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTGGGTGCTCGCCACAGTaGCAGCCGGCTCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSGCSPQ*QPAPGC
Trigger: GCACCCAGGAGCCGGCTGCCACTGTGGCGAGCACCC...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCTGGCCCTGCGGCACATaGGTGAGCCGGGAGCGGATT +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFWPCGT*VSRERI
Trigger: AATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCA...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCTTACCACTGGCAGCCTaGCAAGCCTGGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVLPLAA*QAWQGP
Trigger: CGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGGTAA...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGGGCTGTTGCCAGCATaGGATGAGTCTATGAAAACA +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCGLLPA*DESMKT
Trigger: TGTTTTCATAGACTCATCCCATGCTGGCAACAGCCC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCTCCTCTCCTGCCCTGTaGCAGAGCCAAGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVSSPAL*QSQAPC
Trigger: GCAAGGGGCTTGGCTCTGCCACAGGGCAGGAGAGGA...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGATTCACTCAGGCTGTaGCATGCGTCAGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCDSLRL*HASEFP
Trigger: AGGAAATTCTGACGCATGCCACAGCCTGAGTGAATC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCGCATGCTTTACCAGGTaGCCGAGCTGGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGACFTR*PSWRSS
Trigger: GCTGCTCCTCCAGCTCGGCCACCTGGTAAAGCATGC...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGGCTGCTGAGCCTGGCTaGGAGTCCTGGGTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASAAEPG*ESWVGS
Trigger: GCTCCCTACCCAGGACTCCCAGCCAGGCTCAGCAGC...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCACACACACGCCTGTGTaGAGCCCTGGCAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGTHTPV*SPGRQR
Trigger: TCTCTGCCTGCCAGGGCTCCACACAGGCGTGTGTGT...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGTGGGCAGAAGCCCCTaGGCCCCTAGCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFVGRSP*APSCHP
Trigger: TGGGTGACAGCTAGGGGCCCAGGGGCTTCTGCCCAC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCAGGAGGCACTTGGCCTaGTTGGTGACTCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGRRHLA*LVTLGR
Trigger: CCTCCCCAGAGTCACCAACCAGGCCAAGTGCCTCCT...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCTGCCAGGACTCCTGTaGGCCTCTTGGCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRLPGLL*ASWRFC
Trigger: GCAGAAACGCCAAGAGGCCCACAGGAGTCCTGGCAG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTTGTAGTGCCGGTAACTaGGGCCTGGGATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLCSAGN*GLGLWS
Trigger: TGACCACAATCCCAGGCCTCAGTTACCGGCACTACA...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGGGCGCAGGGCAGTGGTaGGGGACCAGGATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGGAGQW*GTRIPA
Trigger: TGCTGGGATCCTGGTCCCTCACCACTGCCCTGCGCC...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCCATTAGCCTGCAGATaGGCAGCTGACTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRPLACR*AADSPV
Trigger: GACTGGGGAGTCAGCTGCTCATCTGCAGGCTAATGG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGTGGTGGCTGCTCACCTaGCCCCACCTCACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWWWLLT*PHLTGV
Trigger: CACCCCTGTGAGGTGGGGTCAGGTGAGCAGCCACCA...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGAGGTGTGGCATTTTaGGCTGCCCACCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWGGVAF*AAHPTA
Trigger: CGCGGTGGGGTGGGCAGCTCAAAATGCCACACCTCC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACCTCCCACCACCAACTaGGCGTGCACCATGCACCCG +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGPPTTN*ACTMHP
Trigger: CGGGTGCATGGTGCACGCTCAGTTGGTGGTGGGAGG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCGGCGTACGCCCGCATaGTTTCCTGCACAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRRRTPA*FPAQCR
Trigger: TCTACACTGTGCAGGAAAGCATGCGGGCGTACGCCG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCCTCGCCACACGAACTaGAGCCCCCGGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYPRHTN*SPRASC
Trigger: GCAGGAGGCCCGGGGGCTGCAGTTCGTGTGGCGAGG...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCGCCCCTTCAGTGAGCTaGGGGACGTGTAGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVAPSVS*GTCRSP
Trigger: CGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGC...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGATCCCCGAGGCCAGGTaGGTTGCGTACATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRIPEAR*VAYMSL
Trigger: GAGAGACATGTACGCAACGCACCTGGCCTCGGGGAT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCCCATCAGCTTGCGCATaGCCAGCATCCCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFPSACA*PASPRP
Trigger: TGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGG...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTTGGCAACCACCAATGTaGTTTGTCTCTGATACACAG +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCWQPPM*FVSDTQ
Trigger: CTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCA...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGCAGGGCGTGTGGTCTaGGTGTGCACACGTACAAGT +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRAGRVV*VCTRTS
Trigger: ACTTGTACGTGTGCACACGCAGACCACACGCCCTGC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CACGTTGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCGGGTACACCCCATCTTaGGGAGGCTTGGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: HVGQGVMVSIPTVSLSQGGYTPS*GGLGKT
Trigger: TGTCTTCCCCAAGCCTCCCCAAGATGGGGTGTACCC...GCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGCCAGTGATGGCATCATaGTGCTGGACCTCGGAGACG +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWPVMAS*CWTSET
Trigger: CGTCTCCGAGGTCCAGCACCATGATGCCATCACTGG...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGTGCGAGGGCACTGGGTaGCCCGCCTCATCTGTGACG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWCEGTG*PASSVT
Trigger: CGTCACAGATGAGGCGGGCCACCCAGTGCCCTCGCA...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGGATCTGCGAGGGCACTaGGTGGCCCGCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVDLRGH*VARLIC
Trigger: ACAGATGAGGCGGGCCACCCAGTGCCCTCGCAGATC...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGACCTGCCCGCATGGCTaGTGCGTCTCCTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWTCPHG*CVSSAC
Trigger: GCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGATGGCCCTGCGGCACATaGGTGAGCCGGGAGCGGATT +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGWPCGT*VSRERI
Trigger: AATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCA...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCATTCCACAGCCGCCGGTaGAGCATGACCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSFHSRR*SMTSTC
Trigger: GCAGGTGGAGGTCATGCTCCACCGGCGGCTGTGGAA...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAGCCAGTGCGCTCCTCTaGCGCAGGGCAGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKASALL*RRAVVR
Trigger: CCTCACCACTGCCCTGCGCCAGAGGAGCGCACTGGC...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGATGATGGGGCCTCCTaGTGGCCTCGAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFDDGAS*WPRGRG
Trigger: ACCTCTCCCTCGAGGCCACCAGGAGGCCCCATCATC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCGTTACATGGAGTTCCTaGGGGAAGCCCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVVTWSS*GKPWGR
Trigger: CCGGCCCCAGGGCTTCCCCCAGGAACTCCATGTAAC...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCGGCTTATGGTCTGGATaGGGGTGGGGAAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSGLWSG*GWGSSP
Trigger: AGGTGAACTTCCCCACCCCCATCCAGACCATAAGCC...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCCACGGTGACAGCGCTTaGGGTCCATCGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVHGDSA*GPSDMP
Trigger: AGGCATGTCCGATGGACCCCAAGCGCTGTCACCGTG...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGACAGGGAGTGGAGCCTaGAAGCTGCCTGTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRTGSGA*KLPVVQ
Trigger: CTGCACTACAGGCAGCTTCCAGGCTCCACTCCCTGT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGACAGAAGAAACCCCTaGGGCCAGGAGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRDRRNP*GQESGG
Trigger: TCCTCCACTCTCCTGGCCCCAGGGGTTTCTTCTGTC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAGGCATGCCCTGGGGTTaGGCTTCGATCTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSGMPWG*ASILGG
Trigger: CCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCC...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGGGCTACAGTCTGCTGTaGCTCCCACCGTGGCAACGG +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASGYSLL*LPPWQR
Trigger: CCGTTGCCACGGTGGGAGCCACAGCAGACTGTAGCC...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCTGTCCAGTGTGGCCTaGGATGCCTCCTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVLSSVA*DASSQP
Trigger: AGGCTGGGAGGAGGCATCCCAGGCCACACTGGACAG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCAGCCGAGGTGGGCATTaGAGCCCGCCAGCGCAAATA +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFSRGGH*SPPAQI
Trigger: TATTTGCGCTGGCGGGCTTCAATGCCCACCTCGGCT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACGGCAGCATGGCTGTTaGTGTGGTCCAGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGRQHGC*CGPAAG
Trigger: ACCCGCTGCTGGACCACATCAACAGCCATGCTGCCG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGCCAGCCCCTTCAGTaGGCTGCGGGACGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWGQPLQ*AAGRVE
Trigger: TTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAGGCCCGCCTCATCTGTaGCGCGGACTCCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKGPPHL*RGLQGN
Trigger: GTTTCCCTGGAGTCCGCGTCACAGATGAGGCGGGCC...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTGTAGCCGTTGTTGTCTaGGTAGATGACCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PEGMPWGWASILGGSRPLVAVVV*VDDLLA
Trigger: AGCCAGCAGGTCATCTACTCAGACAACAACGGCTAC...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCACTGGGTGGACGACTaGGGTGTCGTTCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVHWVDD*GVVQRE
Trigger: CTCACGCTGAACGACACCTCAGTCGTCCACCCAGTG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCTCAGGATCTGCAGGTaGAGATTCGGGGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVLRICR*RFGGSV
Trigger: GACGCTGCCCCCGAATCTTCACCTGCAGATCCTGAG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTGAAAAACCCCAAATATaGCCATTTCCTGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: QPGKPGRARTADALRCCCEKPQI*PFPAIS
Trigger: GCTAATGGCAGGAAATGGTCATATTTGGGGTTTTTC...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCCGTGGCGAGGATCATaGAAGAGGAGGTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWPWRGS*KRRWVA
Trigger: GGCCACCCACCTCCTCTTTCATGATCCTCGCCACGG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCGGGGGAGCATCAGATaGCCAACTTCCAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVRGSIR*PTSRSH
Trigger: GTGGGACCTGGAAGTTGGTCATCTGATGCTCCCCCG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGCATCCTGGGGAGCTTaGGCAGGTGCTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGASWGA*AGAGQS
Trigger: ACTCTGGCCAGCACCTGCTCAAGCTCCCCAGGATGC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGAGCCGGAAAAACTCCTaGTCCACAGCGATGAACCGG +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRSRKNS*STAMNR
Trigger: CCGGTTCATCGCTGTGGAGCAGGAGTTTTTCCGGCT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGCCAAACGGGTCAACGTaGCAGGAGAACTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASPNGST*QENCGR
Trigger: CCGGCCACAGTTCTCCTGGCACGTTGACCCGTTTGG...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGTCCATGTTGGCAAACTaGACCGAGGCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWSMLAN*TEALKN
Trigger: GTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGA...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACCCAGCGTGGCATACTaGACCGAGACACCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGPSVAY*TETPSS
Trigger: CGAGCTCGGTGTCTCGGTGCAGTATGCCACGCTGGG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGATGTCCTGCAGGTCCTaGATCGGAGCTGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASMSCRS*IGAGRH
Trigger: ATGGCGGCCAGCTCCGATGCAGGACCTGCAGGACAT...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCCCGGCTTGGTACTCCTaGTCTATCCGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFPAWYS*SIRWQS
Trigger: GCTCTGCCACCGGATAGAGCAGGAGTACCAAGCCGG...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGTGGGGCCGGGGCATCTaGCCAGGGCTCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGWGRGI*PGLTAV
Trigger: AACAGCAGTGAGCCCTGGGCAGATGCCCCGGCCCCA...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCCCATCCCTCCGCACTaGTTTTCCCTGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVPIPPH*FSLSWV
Trigger: GACCCAGGACAGGGAAAAGCAGTGCGGAGGGATGGG...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCCCTTGCAGGGCTGTTaGCAGCATGGGATGAGTCTA +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRPLQGC*QHGMSL
Trigger: TAGACTCATCCCATGCTGGCAACAGCCCTGCAAGGG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTCTGCTGTGCCTTCTCTaGTCGGCAGGCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSLLCLL*SAGGAL
Trigger: CAGGGCACCGCCTGCCGAGCAGAGAAGGCACAGCAG...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGGATATTGGACATCCCTaGTGTGTGGTTTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWDIGHP*CVVSPL
Trigger: GAGAGGTGAAACCACACAGCAGGGATGTCCAATATC...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCACTGGGAGATGGAGGTTaGAGCCAGCTGAGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSLGDGG*SQLRAH
Trigger: GTGCGCTCTCAGCTGGCTGCAACCTCCATCTCCCAG...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGTTCTCACAGCACATCTaGGAGGACAGGACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRFSQHI*EDRTGR
Trigger: ACGGCCAGTCCTGTCCTCGCAGATGTGCTGTGAGAA...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGGCAGATGGTTGGATGTaGACCGGGTCTGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRADGWM*TGSDQL
Trigger: CAGCTGGTCAGACCCGGTGCACATCCAACCATCTGC...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGGCGGACTGGACCCCTaGCGGTCGCAGCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYGGLDP*RSQQQE
Trigger: CTCCTGTTGCTGCGACCGCCAGGGGTCCAGTCCGCC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCAGGCTCACTCATGTTaGGGTACACCCCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRQAHSC*GTPHLG
Trigger: CCCAAGATGGGGTGTACCCCAACATGAGTGAGCCTG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTAGCAGCTCCCCGTCATaGCCCTGCGGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSSSSPS*PCGTWV
Trigger: CACCCATGTGCCGCAGGGCCATGACGGGGAGCTGCT...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTACGGCCTCTTGCTGCTaGGGTCCTGGGAGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSTASCC*GPGSFG
Trigger: GCCGAAGCTCCCAGGACCCCAGCAGCAAGAGGCCGT...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGACGGCCTCTTGCTGCTaGGGTCCTGGGAGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKTASCC*GPGSFG
Trigger: GCCGAAGCTCCCAGGACCCCAGCAGCAAGAGGCCGT...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGTTACATGGAGTTCCTaGGGGAAGCCCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWVTWSS*GKPWGR
Trigger: CCGGCCCCAGGGCTTCCCCCAGGAACTCCATGTAAC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCAGCCTCCCGAGTAGCTaGGACTACAGGCGCACACCA +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVSLPSS*DYRRTP
Trigger: TGGTGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAGCCAAGAGGGGAACCTaGAAGGGGACGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKAKRGT*KGTRPG
Trigger: CCCAGGCCTCGTCCCCTTCCAGGTTCCCCTCTTGGC...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGTTGGGCAGGGAGTCATaGTGTCCATCCCAACCGTCT +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRLGRES*CPSQPS
Trigger: AGACGGTTGGGATGGACACCATGACTCCCTGCCCAA...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGGTGCGGACAGGGAGTaGAGCCTGGAAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGGADRE*SLEAAC
Trigger: ACAGGCAGCTTCCAGGCTCCACTCCCTGTCCGCACC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGTTGGGCTTCGATCTTaGGAGGGAGCCGTCCACTTA +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRVGLRS*EGAVHL
Trigger: TAAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAAC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGGCCTCGAGGGAGAGGTaGTGTCACCTAGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVASRER*CHLGEQ
Trigger: CTGTTCCCCTAGGTGACACCACCTCTCCCTCGAGGC...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTGATTTCCTGCCGCTCTaGGAGGGATGGGGACCCTCG +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSDFLPL*EGWGPS
Trigger: CGAGGGTCCCCATCCCTCTCAGAGCGGCAGGAAATC...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAAGCCTGCGGCCAAATTaGAGGGTGCTCGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGSLRPN*RVLATV
Trigger: CACTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCT...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTAGGTGTCGTTCAGCGTaGGGTTGTAGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GKAFLATTAEPYPALKFARCRSA*GCSPGP
Trigger: GGGACCTGGGCTACAACCTCACGCTGAACGACACCT...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGAATCCCAGGTCCCTGTaGGCGAGCGCTCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGNPRSL*ASAPPL
Trigger: CAGTGGAGGAGCGCTCGCTCACAGGGACCTGGGATT...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCTCTGGCCACTACTGCTaGGCCCTACCCTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFSGHYC*ALPCLE
Trigger: TTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGA...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGAGGTGCTGGCCAGAGTaGATGGGACCTGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGRCWPE*MGPVRP
Trigger: GGGACGCACAGGTCCCATTCACTCTGGCCAGCACCT...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTACTTGGCCTGGTTGGTaGCTCTGGGGAGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: GKAFLATTAEPYPALKFATWPGW*LWGGIL
Trigger: CAGGATGCCTCCCCAGAGTCACCAACCAGGCCAAGT...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGCAGCAACAGGAGCGGTaGCAGCAGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQQQQER*QQRQPA
Trigger: TGCTGGCTGCCGCTGCTGGCACCGCTCCTGTTGCTG...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAGTCACAGCCTCGTCATaGATGACCTGGCCTCCGATG +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSVTASS*MTWPPM
Trigger: CATCGGAGGCCAGGTCATGCATGACGAGGCTGTGAC...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGATCTGGTCATCAAGGTaGGTCACAGCCTCGTCATGC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRIWSSR*VTASSC
Trigger: GCATGACGAGGCTGTGACGCACCTTGATGACCAGAT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGAGCCCCCGGGCCTCCTaGATGGCTGCCTTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGSPRAS*MAAFRS
Trigger: CGACCTGAAGGCAGCCATGCAGGAGGCCCGGGGGCT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAGGATGTGGGACGGGGTaGAGTAGCTGTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSGCGTG*SSCTGP
Trigger: TGGACCAGTACAGCTACTGCACCCCGTCCCACATCC...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCATCCCCGAGGCCAGGTaGGTTGCGTACATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFIPEAR*VAYMSL
Trigger: GAGAGACATGTACGCAACGCACCTGGCCTCGGGGAT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGCGAGGCAAAATGTCCTaGAGGTCCTGCATCGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRRGKMS*RSCIGA
Trigger: AGCTCCGATGCAGGACCTGCAGGACATTTTGCCTCG...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGCCCTCTTGGGCCCCTaGAGTGGGTCTGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFALLGP*SGSDVV
Trigger: TACAACATCAGACCCACTGCAGGGGCCCAAGAGGGC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGAGCACCACGGGCCTGTaGTGCAGCGCCAGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGSTTGL*CSASAL
Trigger: GAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCTCCAGCGGTGCAGCATaGTCAAATCCCAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFSSGAA*SNPRSL
Trigger: CAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGA...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCGTGAGTCTTGTGCTCTaGCTTAGGCAGAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSVSLVL*LRQKVL
Trigger: CAGGACTTTCTGCCTAAGGCAGAGCACAAGACTCAC...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGTGTGGCATTTTGAGCTaGCCACCCCACCGCGGAGTT +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVCGILS*PPHRGV
Trigger: AACTCCGCGGTGGGGTGGGCAGCTCAAAATGCCACA...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCACCTGGTATTTCTGCTaGTCCGAGGCGACGCCATCC +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFTWYFC*SEATPS
Trigger: GGATGGCGTCGCCTCGGACCAGCAGAAATACCAGGT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCAGGAGCTGGCGGACCTaGTATTTCTGCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVRSWRT*YFCWSE
Trigger: CTCGGACCAGCAGAAATACCAGGTCCGCCAGCTCCT...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCAGGAGCTGGCGGACCTaGTATTTCTGCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFRSWRT*YFCWSE
Trigger: CTCGGACCAGCAGAAATACCAGGTCCGCCAGCTCCT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCATCTTGGGGAGGCTTaGGGAAGACAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVHLGEA*GRQPRH
Trigger: ATGGCGTGGCTGTCTTCCCCAAGCCTCCCCAAGATG...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGCATCTTGGGGAGGCTTaGGGAAGACAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASHLGEA*GRQPRH
Trigger: ATGGCGTGGCTGTCTTCCCCAAGCCTCCCCAAGATG...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGCATGGCTGTTGATGTaGTCCAGCAGCGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFAWLLM*SSSGSM
Trigger: CATGGACCCGCTGCTGGACCACATCAACAGCCATGC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTCCGAGCTCGGCAGCATaGCTGTTGATGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKAFLATTAEPYPALKFAPSSAA*LLMWSS
Trigger: GCTGGACCACATCAACAGCCATGCTGCCGAGCTCGG...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCCCTGGAATGGTTCTGTaGAATAGGGCAGGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSPGMVL*NRAGSR
Trigger: ACGACTTCCTGCCCTATTCCACAGAACCATTCCAGG...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCATGGGTGCCTGGGGCTaGAGCTCATCTAGGACGATG +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFMGAWG*SSSRTM
Trigger: CATCGTCCTAGATGAGCTCCAGCCCCAGGCACCCAT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGCCGCCATGGGTGCCTaGGGCTGGAGCTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYAAMGA*GWSSSR
Trigger: CCTAGATGAGCTCCAGCCCCAGGCACCCATGGCGGC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTGTCCACAGTTACCACTaGCAGCCTGGCAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GKAFLATTAEPYPALKFAVHSYH*QPGKPG
Trigger: GCCAGGCTTGCCAGGCTGCCAGTGGTAACTGTGGAC...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGCCCTGAGGCACAGGTaGGCGTCTGGGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYALRHR*ASGAGT
Trigger: AGTTCCAGCCCCAGACGCCCACCTGTGCCTCAGGGC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGGTTTCACCTCTCATaGACTCTGACGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWWFHLS*TLTAAV
Trigger: CACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCA...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGTCTTAATTCATCTGTaGATGGACATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVVLIHL*MDIWVV
Trigger: AACAACCCAAATGTCCATCCACAGATGAATTAAGAC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGATACCAGCGTCCATTTaGGAGGAAGCCCTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRIPASI*EEALVD
Trigger: ATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTAT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGAGAGGGGCCTGGGTGTaGACCCTGGATTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASRGAWV*TLDCLT
Trigger: AGTCAGACAATCCAGGGTCCACACCCAGGCCCCTCT...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCCAGTCTGCCGGCGATaGCGGGAAGATGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVPVCRR*REDDSD
Trigger: ATCACTGTCATCTTCCCGCCATCGCCGGCAGACTGG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGGACAGGCAGATGGTTaGATGTGCACCGGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFGQADG*MCTGSD
Trigger: GTCAGACCCGGTGCACATCCAACCATCTGCCTGTCC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGGCCGGGACAGGCAGATaGTTGGATGTGCACCGGGTC +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGAGTGR*LDVHRV
Trigger: GACCCGGTGCACATCCAACCATCTGCCTGTCCCGGC...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGCCTGTGTGGAGCCCTaGCAGGCAGAGACTAACCCA +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWACVEP*QAETNP
Trigger: TGGGTTAGTCTCTGCCTGCCAGGGCTCCACACAGGC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGCCACAGGTAGCGTGTaGACATGGACTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKATGSV*TWTPRH
Trigger: ATGCCGGGGAGTCCATGTTCACACGCTACCTGTGGC...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCTGTAGTGCCGGTAACTaGGGCCTGGGATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFCSAGN*GLGLWS
Trigger: TGACCACAATCCCAGGCCTCAGTTACCGGCACTACA...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGCGGCCTTGCCCGGTGTaGACAGGTAGTTATCGGAAA +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASRPCPV*TGSYRK
Trigger: TTTCCGATAACTACCTGTTCACACCGGGCAAGGCCG...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGCTGGGATTAAGGCATaGACCACTGCCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGAGIKA*TTAQPP
Trigger: TGGAGGCTGGGCAGTGGTTCATGCCTTAATCCCAGC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGGACCGGCTGATGGGCTaGGGTCAGCAGGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGDRLMG*GQQGQG
Trigger: ACCTTGGCCCTGCTGACCTCAGCCCATCAGCCGGTC...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCACGTTTCTGCCCACCCTaGGGGCAATTCATAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSRFCPP*GQFIGW
Trigger: CCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACG...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGCGGACCTGGTATTTCTaGTGGTCCGAGGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKRTWYF*WSEATP
Trigger: TGGCGTCGCCTCGGACCAGCAGAAATACCAGGTCCG...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGCCTCCTGCATGGCTaGCTTCAGGTCGTAGTCGAT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWGLLHG*LQVVVD
Trigger: ATCGACTACGACCTGAAGGCAGCCATGCAGGAGGCC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCTGCGTGAAGATTTCCTaGCGCTCTGAGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVCVKIS*RSERDG
Trigger: CCCATCCCTCTCAGAGCGGCAGGAAATCTTCACGCA...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAGGCCAAATTGAAGGGTaGTCGCCACAGTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKGQIEG*SPQWQP
Trigger: CGGCTGCCACTGTGGCGAGCACCCTTCAATTTGGCC...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGCAGATGCGCTTCGGTaGTGCTGTGAGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFADALR*CCESCA
Trigger: AGCACAAGACTCACAGCAGCACCGAAGCGCATCTGC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTCCCACTGCACATCCATaGCTCTGGTGGCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSPTAHP*LWWLLT
Trigger: GGTGAGCAGCCACCAGAGGCATGGATGTGCAGTGGG...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGCACAGCTCCCTCATCTaGTTCTCACAGCACATCTGC +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRHSSLI*FSQHIC
Trigger: GCAGATGTGCTGTGAGAAGCAGATGAGGGAGCTGTG...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGTATGGCATCCCCTTCTaGCAGGACTCCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWYGIPF*QDSCGP
Trigger: AGGCCCACAGGAGTCCTGGCAGAAGGGGATGCCATA...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTCGTCATGCATGACCTaGCCTCCGATGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWSSCMT*PPMTNS
Trigger: GGAATTTGTCATCGGAGGCCAGGTCATGCATGACGA...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCATACAACAAGGCGCTaGCTCGCCGGGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGHTTRR*LAGPAP
Trigger: AGGGGCTGGCCCGGCGAGCCAGCGCCTTGTTGTATG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACCAGTGATGGCATCATaGTGCTGGACCTCGGAGACG +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGPVMAS*CWTSET
Trigger: CGTCTCCGAGGTCCAGCACCATGATGCCATCACTGG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCGCTCATCTAGGACGATaGAGGCCATCAGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVAHLGR*RPSACA
Trigger: TGCGCAAGCTGATGGCCTCCATCGTCCTAGATGAGC...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGGATCTGCGAGGGCACTaGGTGGCCCGCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQDLRGH*VARLIC
Trigger: ACAGATGAGGCGGGCCACCCAGTGCCCTCGCAGATC...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGTCCAGGGGGCCGGCTTaGTACTCCTGCTCTATCCGG +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQSRGPA*YSCSIR
Trigger: CCGGATAGAGCAGGAGTACCAAGCCGGCCCCCTGGA...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGTGTTTAGGTTGGTGCTaGTCCTCAGGACAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRCLGWC*SSGQPH
Trigger: GTGAGGCTGTCCTGAGGACCAGCACCAACCTAAACA...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAAGTGCTCCGTGTGGTTaGAGCTGTAGCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKSAPCG*SCSASQ
Trigger: CTGGCTGGCGCTACAGCTCCAACCACACGGAGCACT...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGTGGCTGAGACAGGACTaGGTCCTCGCCCACTTCATA +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASWLRQD*VLAHFI
Trigger: TATGAAGTGGGCGAGGACCCAGTCCTGTCTCAGCCA...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCCGGATTTCCTTTGGGTaGACGGTGATGATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFRISFG*TVMMGP
Trigger: AGGCCCCATCATCACCGTCCACCCAAAGGAAATCCG...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACTCCTCTCCTGCCCTGTaGCAGAGCCAAGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYSSPAL*QSQAPC
Trigger: GCAAGGGGCTTGGCTCTGCCACAGGGCAGGAGAGGA...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGTGCAGGAGCTCACGGTaGCACATGTCGTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASCRSSR*HMSYEA
Trigger: TGCCTCATACGACATGTGCCACCGTGAGCTCCTGCA...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CAA 72 bp TGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTaGGTGCTTCCATCTGTGAAACGGGGGAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: WCPSQPSPCLRA*VLPSVKRGSIR
Trigger: TCTGATGCTCCCCCGTTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CAA 72 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTaGGTCCTGGCCCTAGTGGCCTCAATTCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHR*VLALVASIPHG
Trigger: CCCATGAGGAATTGAGGCCACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGCAGCTCTTCCACCACTaGGGTGTAGACATTGGCGGC +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGQLFHH*GVDIGG
Trigger: GCCGCCAATGTCTACACCTCAGTGGTGGAAGAGCTG...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCGGCAGCATGGCTGTTaGTGTGGTCCAGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGRQHGC*CGPAAG
Trigger: ACCCGCTGCTGGACCACATCAACAGCCATGCTGCCG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACGGCCTTGCCCGGTGTaGACAGGTAGTTATCGGAAA +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGRPCPV*TGSYRK
Trigger: TTTCCGATAACTACCTGTTCACACCGGGCAAGGCCG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGAGGTGTCGTTCAGCGTaGGGTTGTAGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQRCRSA*GCSPGP
Trigger: GGGACCTGGGCTACAACCTCACGCTGAACGACACCT...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCTCAGGATCTGCAGGTaGAGATTCGGGGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYLRICR*RFGGSV
Trigger: GACGCTGCCCCCGAATCTTCACCTGCAGATCCTGAG...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACCTTTCCGGAGATTCTaGGAGTGCTCCGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGPFRRF*ECSVWL
Trigger: CAACCACACGGAGCACTCTCAGAATCTCCGGAAAGG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGTTCACTGTCACTGGCTaGGACAGGACTGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGFTVTG*DRTGSS
Trigger: CGAGGACCCAGTCCTGTCTCAGCCAGTGACAGTGAA...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGCCTGTGCCATCTTGTaGCCGCAAACAAGCAGACGG +
Preference number: 4 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKACAIL*PQTSRR
Trigger: CCGTCTGCTTGTTTGCGGTCACAAGATGGCACAGGC...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGAGCCCAAGAGCTTTCTaGGACCATCTGGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASSPRAF*DHLVSL
Trigger: CAGACTCACCAGATGGTCTCAGAAAGCTCTTGGGCT...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCCAAACGGGTCAACGTaGCAGGAGAACTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYPNGST*QENCGR
Trigger: CCGGCCACAGTTCTCCTGGCACGTTGACCCGTTTGG...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGTGCGTGAAGATTTCCTaGCGCTCTGAGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWCVKIS*RSERDG
Trigger: CCCATCCCTCTCAGAGCGGCAGGAAATCTTCACGCA...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGAACCAGGCGGCCCTCTaGTTCACGTTGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGNQAAL*FTLATR
Trigger: CCTGGTGGCCAACGTGAAGCAGAGGGCCGCCTGGTT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCGAGGCCAGGTGCGTTaGGTACATGTCTCTCACCTT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWRGQVR*VHVSHL
Trigger: AAGGTGAGAGACATGTACGCAACGCACCTGGCCTCG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCGAGGCAAAATGTCCTaGAGGTCCTGCATCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWRGKMS*RSCIGA
Trigger: AGCTCCGATGCAGGACCTGCAGGACATTTTGCCTCG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGTTGAGTTCTGGATCTaGGAGGGCACTGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYVEFWI*EGTGWP
Trigger: GGGCCACCCAGTGCCCTCGCAGATCCAGAACTCAAC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGTGCGTCTCCTCAGCCTaGGGCCAAATTGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGCVSSA*GQIEGC
Trigger: GCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCA...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCAGGCACCAAGTACCTaGCCGCATGGCTGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGQAPST*PHGWCV
Trigger: GACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGAGCATGACCTCCACCTaGCCATTCCCTTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGSMTST*PFPWLE
Trigger: CTCCAGCCAAGGGAATGGGCAGGTGGAGGTCATGCT...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAGAGCCAAGCCCCTTaGAGGGCTGTTGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYQSQAP*RAVASM
Trigger: CATGCTGGCAACAGCCCTGCAAGGGGCTTGGCTCTG...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGCATGCCTCTGGTGGCTaGTCACCTGACCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQHASGG*SPDPTS
Trigger: TGAGGTGGGGTCAGGTGAGCAGCCACCAGAGGCATG...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGTGCAGCCAAACTCACTaGGTTCCTAACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRCSQTH*VPNSMV
Trigger: GACCATTGAGTTAGGAACGCAGTGAGTTTGGCTGCA...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAAGACAAAAGCCAGTCTaGCGGCGATGGCGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGRQKPV*RRWRED
Trigger: ATCTTCCCGCCATCGCCGGCAGACTGGCTTTTGTCT...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTCGTGTGGTCTGCGTGTaGACACGTACAAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GKAFLATTAEPYPALKFARVVCV*TRTSAH
Trigger: GTGTGCACTTGTACGTGTGCACACGCAGACCACACG...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGAGTGAATGGGACCTGTaGGTCCCAGGCAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKSEWDL*VPGRGH
Trigger: ATGCCCTCTGCCTGGGACGCACAGGTCCCATTCACT...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCAGGCTCACTCATGTTaGGGTACACCCCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWQAHSC*GTPHLG
Trigger: CCCAAGATGGGGTGTACCCCAACATGAGTGAGCCTG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAGAGGTTGATGTTGGCTaGGGTGACAGGCTCACTCAT +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSEVDVG*GDRLTH
Trigger: ATGAGTGAGCCTGTCACCCCAGCCAACATCAACCTC...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAAGTAGTCGCCCAGCGTaGCATACTGCACCGAGACAC +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKSSRPA*HTAPRH
Trigger: GTGTCTCGGTGCAGTATGCCACGCTGGGCGACTACT...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACAAGTACCTGCCCGCATaGCTGGTGCGTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYKYLPA*LVRLLS
Trigger: GCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTT...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGTGCTGTGCATCAGGTTaGTATCCTGGTCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASCCASG*YPGRAA
Trigger: TGCTGCTCGACCAGGATACCAACCTGATGCACAGCA...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAATACTCCAGGAATTCCTaGGTCACGCGCACCGTTCGG +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKYSRNS*VTRTVR
Trigger: CCGAACGGTGCGCGTGACCCAGGAATTCCTGGAGTA...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGCTGGCTGTTTAGGTTaGTGCTGGTCCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWAGCLG*CWSSGQ
Trigger: CTGTCCTGAGGACCAGCACCAACCTAAACAGCCAGC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGAGCCAGAGCACTGGGTaGACGACTGAGGTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGSQSTG*TTEVSF
Trigger: GAACGACACCTCAGTCGTCCACCCAGTGCTCTGGCT...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCGGATTTCCTTTGGGTaGACGGTGATGATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWRISFG*TVMMGP
Trigger: AGGCCCCATCATCACCGTCCACCCAAAGGAAATCCG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTCGTCCGGATTTCCTTTaGGTGGACGGTGATGATGGG +
Preference number: 4 (lower is better)
Translates to: GKAFLATTAEPYPALKFARPDFL*VDGDDG
Trigger: CCCATCATCACCGTCCACCCAAAGGAAATCCGGACG...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGCAGCCTGGCAAGCCTaGCAGGGCCCGGACGGCAGA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPAAWQA*QGPDGR
Trigger: TCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGATTCACTCAGGCTGTaGCATGCGTCAGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRDSLRL*HASEFP
Trigger: AGGAAATTCTGACGCATGCCACAGCCTGAGTGAATC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGGTAATCCTGGCACTTTaGGAGGCCGGGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQVILAL*EAGAGR
Trigger: TCTGCCTGCCCCGGCCTCCCAAAGTGCCAGGATTAC...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGGGGAGGAAGCCCTCGTaGATCTCTTTGCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGGRKPS*ISLPRQ
Trigger: CTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCC...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAACTGCACCGAGGCATTaGAGAACTGCTTGTCACATC +
Preference number: 4 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSTAPRH*RTACHI
Trigger: GATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGT...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGCAAATATCCTTTACGTaGCAGAAGAGGAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRQISFT*QKRRGL
Trigger: CAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTG...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCGGCAGGCGGTGCCCTaGGGCACAGGTGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFERQAVP*GTGGRL
Trigger: CAGACGCCCACCTGTGCCTCAGGGCACCGCCTGCCG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGCAGGAGAATCACTTaGACCTGGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWGRRIT*TWEMEV
Trigger: AACCTCCATCTCCCAGGTTCAAGTGATTCTCCTGCC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGGGATGTGGGACGGGGTaGAGTAGCTGTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQGCGTG*SSCTGP
Trigger: TGGACCAGTACAGCTACTGCACCCCGTCCCACATCC...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTGGCTGTTTAGGTTGGTaGTGGTCCTCAGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSGCLGW*WSSGQP
Trigger: AGGCTGTCCTGAGGACCAGCACCAACCTAAACAGCC...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGTCCAGCGGTGCAGCATaGTCAAATCCCAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQSSGAA*SNPRSL
Trigger: CAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGA...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAGATGCGCTTCGGTGCTaGTGTGAGTCTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKDALRC*CESCAL
Trigger: CAGAGCACAAGACTCACAGCAGCACCGAAGCGCATC...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCAGAGCCAAGCCCCTTaGAGGGCTGTTGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGQSQAP*RAVASM
Trigger: CATGCTGGCAACAGCCCTGCAAGGGGCTTGGCTCTG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCAGAGGCTGGAGAATTaGTTGAACCCAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWQRLEN*LNPGGA
Trigger: TGCACCTCCTGGGTTCAAGCAATTCTCCAGCCTCTG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGGCTTCATCTAGGGTTTaGTTCCCTGGCTTATGGTCT +
Preference number: 4 (lower is better)
Translates to: SRAERATSAKRGTWKGTRASSRV*FPGLWS
Trigger: AGACCATAAGCCAGGGAAGCAAACCCTAGATGAAGC...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGAGGTGTTTTGTGACTTaGAGCCAAACTCACTGCGTT +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWRCFVT*SQTHCV
Trigger: AACGCAGTGAGTTTGGCTGCAAGTCACAAAACACCT...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGGGGTACACCCCATCTTaGGGAGGCTTGGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQGYTPS*GGLGKT
Trigger: TGTCTTCCCCAAGCCTCCCCAAGATGGGGTGTACCC...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGAGGTTGATGTTGGCTaGGGTGACAGGCTCACTCAT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWEVDVG*GDRLTH
Trigger: ATGAGTGAGCCTGTCACCCCAGCCAACATCAACCTC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGACATCCCCGTTGACGTaGTACTCCAGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWTSPLT*YSRNSW
Trigger: CCAGGAATTCCTGGAGTACCACGTCAACGGGGATGT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGGGTAGTTATCGGAAATaGGGCCCTGTTTCACATCCC +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVGSYRK*GPVSHP
Trigger: GGGATGTGAAACAGGGCCCCATTTCCGATAACTACC...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGCTGGCTGTTTAGGTTaGTGCTGGTCCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKAGCLG*CWSSGQ
Trigger: CTGTCCTGAGGACCAGCACCAACCTAAACAGCCAGC...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCGGCGGAGGTCAGCCTaGGCTTCCCCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPRRRSA*ASPRWP
Trigger: AGGCCATCGAGGGGAAGCCCAGGCTGACCTCCGCCG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGCAGATTCACTGTCACTaGCTGAGACAGGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWQIHCH*LRQDWV
Trigger: GACCCAGTCCTGTCTCAGCCAGTGACAGTGAATCTG...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCGACATCCCTGCTGTGTaGTTTCACCTCTCATGGACT +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVDIPAV*FHLSWT
Trigger: AGTCCATGAGAGGTGAAACCACACAGCAGGGATGTC...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAATGGTCTGGATGGGGGTaGGGAAGTTCACCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKWSGWG*GSSPPD
Trigger: ATCTGGAGGTGAACTTCCCCACCCCCATCCAGACCA...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGATGGCGAAAAGGTACTaGGGCTTCTCTGGATTCCCC +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWMAKRY*GFSGFP
Trigger: GGGGAATCCAGAGAAGCCCCAGTACCTTTTCGCCAT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGAAAGAGGAGGTGGGTaGCCCAGTAAGACATCATGG +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWERGGG*PSKTSW
Trigger: CCATGATGTCTTACTGGGCCACCCACCTCCTCTTTC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCACAGGCAGGGCGTGTaGTCTGCGTGTGCACACGTA +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGHRQGV*SACAHV
Trigger: TACGTGTGCACACGCAGACCACACGCCCTGCCTGTG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
3UTR CAA 72 bp GAGACTGTCTTTGCTGTCTGGTGGCCAAACTGCACGTaGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: ETVFAVWWPNCT*SRGLTPSKLVL
Trigger: AAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGACCCGTGTCCTTCTGTaGGCTGCAGGATCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQTRVLL*AAGSGH
Trigger: ATGACCAGATCCTGCAGCTCACAGAAGGACACGGGT...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAACTGCACCGAGGCATTaGAGAACTGCTTGTCACATC +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGTAPRH*RTACHI
Trigger: GATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGT...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCCCTGCAGTGGGTCTaGTGTTGTAGTGCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGPLQWV*CCSAGN
Trigger: GTTACCGGCACTACAACATCAGACCCACTGCAGGGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGAAAAACCCCAAATATaGCCATTTCCTGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: PFPIGLVPASLTPRGGRREKPQI*PFPAIS
Trigger: GCTAATGGCAGGAAATGGTCATATTTGGGGTTTTTC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAGTTGCCAGCATGGGATaGGTCTATGAAAACACGTGG +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGVASMG*VYENTW
Trigger: CCACGTGTTTTCATAGACTCATCCCATGCTGGCAAC...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGAGGTGCAGGTCGCAGTaGGCTGAGATCTTGACACTG +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQRCRSQ*AEILTL
Trigger: CAGTGTCAAGATCTCAGCTCACTGCGACCTGCACCT...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTCCTCCCAGGTTCAAGTaGTTGATTCTCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSPPRFK*LILLPQ
Trigger: CTGAGGCAGGAGAATCAATCACTTGAACCTGGGAGG...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGGTGGCGCGCCCCTGTaGTCCCAGTTACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPGGAPL*SQLLGR
Trigger: CCTCCCAAGTAACTGGGATCACAGGGGCGCGCCACC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGCGATGAACCGGCGCTaGTGGCCGCGGGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARAMNRR*WPRASS
Trigger: AGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCATCGC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGCCTCGCCACACGAACTaGAGCCCCCGGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPPRHTN*SPRASC
Trigger: GCAGGAGGCCCGGGGGCTGCAGTTCGTGTGGCGAGG...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCTGGGGCCGGGGCATCTaGCCAGGGCTCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFWGRGI*PGLTAV
Trigger: AACAGCAGTGAGCCCTGGGCAGATGCCCCGGCCCCA...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGATGGACTCTGACGGCTaGTGTGCCTTCTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGMDSDG*CAFSAR
Trigger: CCGAGCAGAGAAGGCACAGCAGCCGTCAGAGTCCAT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGATATTGGACATCCCTaGTGTGTGGTTTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFDIGHP*CVVSPL
Trigger: GAGAGGTGAAACCACACAGCAGGGATGTCCAATATC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCTGGCAACCACCAATGTaGTTTGTCTCTGATACACAG +
Preference number: 4 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVWQPPM*FVSDTQ
Trigger: CTGTGTATCAGAGACAAAGCACATTGGTGGTTGCCA...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAACCAGAGACTGTCTTTaGTGTCTGGTGGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGTRDCL*CLVAKL
Trigger: CAGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGT...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGCTCTAAAGGGCTCCTaGCTCACTCCTTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYALKGS*LTPCAS
Trigger: TGAGGCACAAGGAGTGAGGCAGGAGCCCTTTAGAGC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCACGTCCATGTGGCTGTaGGGCACCACGAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFTSMWL*GTTKAR
Trigger: CCGGGCCTTCGTGGTGCCCCACAGCCACATGGACGT...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCTTCCTCCAGGAGCTaGCGGACCTGGTATTTCTGC +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGPSSRS*RTWYFC
Trigger: GCAGAAATACCAGGTCCGCCAGCTCCTGGAGGAAGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTATCCGGGAGCCGAGGTaGGCATTGAAGCCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPIREPR*ALKPAS
Trigger: GCTGGCGGGCTTCAATGCCCACCTCGGCTCCCGGAT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCAAAATCCTGACCTGTTaGAGAAAGGGATGTGGGACG +
Preference number: 4 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVKILTC*RKGCGT
Trigger: CGTCCCACATCCCTTTCTCCAACAGGTCAGGATTTT...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGCTGCAGGGCCCAGGTaGGGTCCAGATGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARAAGPR*GPDAHG
Trigger: CCCGTGGGCATCTGGACCCCACCTGGGCCCTGCAGC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGCCGCCATGGGTGCCTaGGGCTGGAGCTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPAAMGA*GWSSSR
Trigger: CCTAGATGAGCTCCAGCCCCAGGCACCCATGGCGGC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCGGAGCTGGCCGCCATaGGTGCCTGGGGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFERSWPP*VPGAGA
Trigger: AGCTCCAGCCCCAGGCACCCATGGCGGCCAGCTCCG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGTGGCAGCCGGCTCCTaGGTGCCCTCTTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPVAAGS*VPSWAP
Trigger: AGGGGCCCAAGAGGGCACCCAGGAGCCGGCTGCCAC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGGGTGCTCGCCACAGTaGCAGCCGGCTCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEGCSPQ*QPAPGC
Trigger: GCACCCAGGAGCCGGCTGCCACTGTGGCGAGCACCC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGAGGCCGACTGAACCATaGGGTAGTAATTCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQRPTEP*GSNSGR
Trigger: TCGCCCGGAATTACTACCCCATGGTTCAGTCGGCCT...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGAGCCAGAGCACTGGGTaGACGACTGAGGTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGSQSTG*TTEVSF
Trigger: GAACGACACCTCAGTCGTCCACCCAGTGCTCTGGCT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCTGCTTTTCCCTGTCCTaGGTCTGTTCTGTTACATGG +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFCFSLS*VCSVTW
Trigger: CCATGTAACAGAACAGACCCAGGACAGGGAAAAGCA...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCTGAAGGCATGCCCTaGGGTTGGGCTTCGATCTTG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGPEGMP*GWASIL
Trigger: CAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGGCGCAGGGCAGTGGTaGGGGACCAGGATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEGAGQW*GTRIPA
Trigger: TGCTGGGATCCTGGTCCCTCACCACTGCCCTGCGCC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGTTTTGTGAATGAATaGCGCATGAGTGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWCFVNE*RMSVPN
Trigger: ATTTGGCACACTCATGCGTCATTCATTCACAAAACA...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCAATGTGCTTTGTCTCTaGTACACAGATTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: GLELSLGATTSSPALWQSNVLCL*YTDLPI
Trigger: AATAGGCAAATCTGTGTATCAGAGACAAAGCACATT...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGCTGGTCTTGAACTACTaGCCACCAGTGATCCGGTTG +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQLVLNY*PPVIRL
Trigger: CAACCGGATCACTGGTGGTCAGTAGTTCAAGACCAG...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTGCCAGTTGTAATACCTaGCAAACCCAGAAGACCATG +
Preference number: 4 (lower is better)
Translates to: GKAFLATTAEPYPALKFAASCNT*QTQKTM
Trigger: CATGGTCTTCTGGGTTTGTCAGGTATTACAACTGGC...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGAGCCGGGAGCGGATTaGATACGTGTAATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYEPGAD*IRVILC
Trigger: GCACAGAATTACACGTATGCAATCCGCTCCCGGCTC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGGGCTGTTTAGGTTGGTaGTGGTCCTCAGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGGCLGW*WSSGQP
Trigger: AGGCTGTCCTGAGGACCAGCACCAACCTAAACAGCC...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGTCACGGCCTCTTGCTaGTGGGGTCCTGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPVTASC*WGPGSF
Trigger: GAAGCTCCCAGGACCCCAGCAGCAAGAGGCCGTGAC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGACTCAGGCTGTGGCATaGGTCAGAATTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWTQAVA*VRISFL
Trigger: AAGGAAGGAAATTCTGACGCATGCCACAGCCTGAGT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCTGAGAGCGCACCATTaGACTCCAGCCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPLRAHH*TPAWGT
Trigger: CGTCCCCCAGGCTGGAGTGCAATGGTGCGCTCTCAG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGCCACGCTGGCCTCCTTaGTTCCCAGGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPPRWPP*FPGQAG
Trigger: GCCAGCCTGCCCTGGGAAGCAAGGAGGCCAGCGTGG...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAATTCCTCATGGGTGTTaGCCTCAAAGCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKIPHGC*PQSPRA
Trigger: AGCTCTTGGGCTTTGAGGGCAACACCCATGAGGAAT...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGATGAACCGGCGCTGCTaGCCGCGGGCCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPMNRRC*PRASSS
Trigger: GGAAGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCAT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTCCTGCATCGGAGCTaGCCGCCATGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVLHRS*PPWVPG
Trigger: CCCAGGCACCCATGGCGGCCAGCTCCGATGCAGGAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGGTCTCTGTTGAGTTCTaGATCTGCGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGVSVEF*ICEGTG
Trigger: CCCAGTGCCCTCGCAGATCCAGAACTCAACAGAGAC...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACACATCCCCGTTGACGTaGTACTCCAGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYTSPLT*YSRNSW
Trigger: CCAGGAATTCCTGGAGTACCACGTCAACGGGGATGT...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGTGTTTAGGTTGGTGCTaGTCCTCAGGACAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQCLGWC*SSGQPH
Trigger: GTGAGGCTGTCCTGAGGACCAGCACCAACCTAAACA...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGAGGCCGACTGAACCATaGGGTAGTAATTCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGRPTEP*GSNSGR
Trigger: TCGCCCGGAATTACTACCCCATGGTTCAGTCGGCCT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGCCAGTGCGCTCCTCTaGCGCAGGGCAGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEASALL*RRAVVR
Trigger: CCTCACCACTGCCCTGCGCCAGAGGAGCGCACTGGC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGTGGCTGAGACAGGACTaGGTCCTCGCCCACTTCATA +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGWLRQD*VLAHFI
Trigger: TATGAAGTGGGCGAGGACCCAGTCCTGTCTCAGCCA...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGGTCTATGAAAACACGTaGCACGCAGTAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGVYENT*HAVGPQ
Trigger: CTGTGGACCTACTGCGTGCCACGTGTTTTCATAGAC...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTACTGTCTTTGCTGTCTaGTGGCCAAACTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSTVFAV*WPNCTL
Trigger: CAACGTGCAGTTTGGCCACCAGACAGCAAAGACAGT...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCATTCCAGTAAAATCCTaGCCTGTTGGAGAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFIPVKS*PVGERD
Trigger: ATCCCTTTCTCCAACAGGTCAGGATTTTACTGGAAT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGGCCCGCCTCATCTGTaGCGCGGACTCCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPGPPHL*RGLQGN
Trigger: GTTTCCCTGGAGTCCGCGTCACAGATGAGGCGGGCC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGCCTGCGGCACATGGGTaGGCCGGGAGCGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPPAAHG*AGSGLH
Trigger: ATGCAATCCGCTCCCGGCTCACCCATGTGCCGCAGG...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGTTTTGCCATCCTCCATaGAGGCCGACTGAACCATGG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGFCHPP*RPTEPW
Trigger: CCATGGTTCAGTCGGCCTTCATGGAGGATGGCAAAA...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCCACTGGGTGGACGACTaGGGTGTCGTTCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFHWVDD*GVVQRE
Trigger: CTCACGCTGAACGACACCTCAGTCGTCCACCCAGTG...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGTTTGTGTTTTGTGAATaGATGACGCATGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVFVFCE*MTHECA
Trigger: GGCACACTCATGCGTCATTCATTCACAAAACACAAA...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACGTTGCCAGCATGGGATaGGTCTATGAAAACACGTGG +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYVASMG*VYENTW
Trigger: CCACGTGTTTTCATAGACTCATCCCATGCTGGCAAC...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGTCCTGGGTAGGGAGCTaGAGCGGGGGTCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFESWVGS*SGGPQT
Trigger: GGTTTGGGGACCCCCGCTTCAGCTCCCTACCCAGGA...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCGGACCTGGTATTTCTaGTGGTCCGAGGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPRTWYF*WSEATP
Trigger: TGGCGTCGCCTCGGACCAGCAGAAATACCAGGTCCG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACTACTGGTCCATGATGTaGGTGAAGATTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYYWSMM*VKISCR
Trigger: GCGGCAGGAAATCTTCACGCACATCATGGACCAGTA...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAAATGTAGCAGTCGTTTaGCACAGGCACCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKNVAVV*HRHQVP
Trigger: AGGTACTTGGTGCCTGTGGCAAACGACTGCTACATT...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCCCGGCTTGGTACTCCTaGTCTATCCGGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFPAWYS*SIRWQS
Trigger: GCTCTGCCACCGGATAGAGCAGGAGTACCAAGCCGG...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGAGCGTCACGGCCTCTTaGTGCTGGGGTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFESVTAS*CWGPGS
Trigger: GCTCCCAGGACCCCAGCAGCAAGAGGCCGTGACGCT...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCTGCTGTGCCTTCTCTaGTCGGCAGGCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFELLCLL*SAGGAL
Trigger: CAGGGCACCGCCTGCCGAGCAGAGAAGGCACAGCAG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGGGACATTTGGGTTGTTaGTACCGTTTGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASGHLGC*YRLTFE
Trigger: CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCC...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCTGAGGTGTAGACATTaGCGGCGTACGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPLRCRH*RRTPAC
Trigger: GCATGCGGGCGTACGCCGCCAATGTCTACACCTCAG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGGCAGGAAGTCGTGGTaGTCGCGGACACGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEGRKSW*SRTRQV
Trigger: CACCTGGCGTGTCCGCGACCACCACGACTTCCTGCC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGGCAGGAAGTCGTGGTaGTCGCGGACACGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPGRKSW*SRTRQV
Trigger: CACCTGGCGTGTCCGCGACCACCACGACTTCCTGCC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTATGGCATCATGGTGCTaGACCTCGGAGACGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPMASWC*TSETAQ
Trigger: CTGGGCCGTCTCCGAGGTCCAGCACCATGATGCCAT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTAAGTACCTGCCCGCATaGCTGGTGCGTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPKYLPA*LVRLLS
Trigger: GCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGAGCAGCTCCCCGTCATaGCCCTGCGGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPSSSPS*PCGTWV
Trigger: CACCCATGTGCCGCAGGGCCATGACGGGGAGCTGCT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCAGATTCACTGTCACTaGCTGAGACAGGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGQIHCH*LRQDWV
Trigger: GACCCAGTCCTGTCTCAGCCAGTGACAGTGAATCTG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGCCTCGAGGGAGAGGTaGTGTCACCTCTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARASRER*CHLCGG
Trigger: GCCGCCACAGAGGTGACACCACCTCTCCCTCGAGGC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCACCACCGTCCACGTTaGGCAGGGAGTCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPHHRPR*AGSHGV
Trigger: GACACCATGACTCCCTGCCCAACGTGGACGGTGGTG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCAGGCAGAGGGCATaGTGCGGACAGGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARPRQRA*CGQGVE
Trigger: CTCCACTCCCTGTCCGCACCATGCCCTCTGCCTGGG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGGCCAGCCCCTTCAGTaGGCTGCGGGACGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARGQPLQ*AAGRVE
Trigger: TTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGGGACTCAGTCCCAGTaGTGGCATCATGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPGTQSQ*WHHGAG
Trigger: TCCAGCACCATGATGCCATCACTGGGACTGAGTCCC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCCCCCTGCAGTGGGTCTaGTGTTGTAGTGCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFPLQWV*CCSAGN
Trigger: GTTACCGGCACTACAACATCAGACCCACTGCAGGGG...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCCATTAGCCTGCAGATaGGCAGCTGACTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPPLACR*AADSPV
Trigger: GACTGGGGAGTCAGCTGCTCATCTGCAGGCTAATGG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCGGCAGGCAGATCACCTaGGGTCAGGAGTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFGRQIT*GQEFQI
Trigger: GATCTGGAACTCCTGACCTCAGGTGATCTGCCTGCC...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCGTTGTCCAGAGGTCTaGCTCCTTCCAAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPRCPEV*LLPSWS
Trigger: GGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCGGCGTACGCCCGCATaGTTTCCTGCACAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPRRTPA*FPAQCR
Trigger: TCTACACTGTGCAGGAAAGCATGCGGGCGTACGCCG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGTGTCCTTCTGTGAGCTaGAGGATCTGGTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGCPSVS*RIWSSR
Trigger: CCTTGATGACCAGATCCTGCAGCTCACAGAAGGACA...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCATCAGCTTGCGCATaGCCAGCATCCCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARPSACA*PASPRP
Trigger: TGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGCCCTCTTGGGCCCCTaGAGTGGGTCTGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPALLGP*SGSDVV
Trigger: TACAACATCAGACCCACTGCAGGGGCCCAAGAGGGC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCAGGCACCAAGTACCTaGCCGCATGGCTGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEQAPST*PHGWCV
Trigger: GACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTCACGGCCTCTTGCTaGTGGGGTCCTGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVTASC*WGPGSF
Trigger: GAAGCTCCCAGGACCCCAGCAGCAAGAGGCCGTGAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCATGGACTCTGACGGCTaGTGTGCCTTCTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFMDSDG*CAFSAR
Trigger: CCGAGCAGAGAAGGCACAGCAGCCGTCAGAGTCCAT...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGTCACCCAGGCTGGAGTaGAGAGGCGGAGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFESPRLE*RGGGLL
Trigger: GAGGAGACCTCCGCCTCTGCACTCCAGCCTGGGTGA...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGCCCTCTGCTTCACGTTaGCCACCAGGGCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPPSASR*PPGPRH
Trigger: ATGCCGAGGCCCTGGTGGCCAACGTGAAGCAGAGGG...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCAGTAGTCGCCCAGCGTaGCATACTGCACCGAGACAC +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFSSRPA*HTAPRH
Trigger: GTGTCTCGGTGCAGTATGCCACGCTGGGCGACTACT...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCTGGAATGGTTCTGTaGAATAGGGCAGGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGPGMVL*NRAGSR
Trigger: ACGACTTCCTGCCCTATTCCACAGAACCATTCCAGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGGGTAGTTATCGGAAATaGGGCCCTGTTTCACATCCC +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGGSYRK*GPVSHP
Trigger: GGGATGTGAAACAGGGCCCCATTTCCGATAACTACC...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGATGATGGGGCCTCCTaGTGGCCTCGAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPDDGAS*WPRGRG
Trigger: ACCTCTCCCTCGAGGCCACCAGGAGGCCCCATCATC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGGGTGGCCTATTGCTTaGTCAGCAACTCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPGWPIA*SATPAQ
Trigger: CTGGGCTGGAGTTGCTGACCAAGCAATAGGCCACCC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCCAGTAAGACATCATaGCGAAAAGGTACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGPSKTS*RKGTGA
Trigger: AGCCCCAGTACCTTTTCGCCATGATGTCTTACTGGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGTTCCAGGTCCCACGCTaGCCTCCTTGCTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEFQVPR*PPCFPG
Trigger: CCCTGGGAAGCAAGGAGGCCAGCGTGGGACCTGGAA...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGCCACAGGTAGCGTGTaGACATGGACTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPATGSV*TWTPRH
Trigger: ATGCCGGGGAGTCCATGTTCACACGCTACCTGTGGC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTAGATGGGGTCTCTGTTaGGTTCTGGATCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPRWGLC*VLDLRG
Trigger: CCCTCGCAGATCCAGAACTCAACAGAGACCCCATCT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGTGTTGTCTGAGTAGATaGCCTGCTGGCTGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGCCLSR*PAGCLG
Trigger: ACCTAAACAGCCAGCAGGTCATCTACTCAGACAACA...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCCCTTTCCGGAGATTCTaGGAGTGCTCCGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFPFRRF*ECSVWL
Trigger: CAACCACACGGAGCACTCTCAGAATCTCCGGAAAGG...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCAATGTGCTTTGTCTCTaGTACACAGATTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFNVLCL*YTDLPI
Trigger: AATAGGCAAATCTGTGTATCAGAGACAAAGCACATT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTAGCCGGAAAAACTCCTaGTCCACAGCGATGAACCGG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPSRKNS*STAMNR
Trigger: CCGGTTCATCGCTGTGGAGCAGGAGTTTTTCCGGCT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGTGATGGCATCATGGTaGTGGACCTCGGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPVMASW*WTSETA
Trigger: GGCCGTCTCCGAGGTCCAGCACCATGATGCCATCAC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTGGACATTTGGGTTGTTaGTACCGTTTGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSGHLGC*YRLTFE
Trigger: CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCC...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGTCTGGTGGCCAAACTaGACGTTGTCCAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPVWWPN*TLSRGL
Trigger: CAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCAGGTCCTCCCCTGGTaGCTGACACAGCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARQVLPW*LTQLPH
Trigger: ATGAGGGAGCTGTGTCAGGCACCAGGGGAGGACCTG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTACTGAGCGTGCACCATaGACCCGCCACCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARTERAP*TRHHAV
Trigger: CACAGCATGGTGGCGGGTGCATGGTGCACGCTCAGT...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCTGAGGTGTAGACATTaGCGGCGTACGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFELRCRH*RRTPAC
Trigger: GCATGCGGGCGTACGCCGCCAATGTCTACACCTCAG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGCCGAGCTCGGCAGCATaGCTGTTGATGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPPSSAA*LLMWSS
Trigger: GCTGGACCACATCAACAGCCATGCTGCCGAGCTCGG...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCGTCCAGGCCTGGAATaGTTCTGTGGAATAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPRPGLE*FCGIGQ
Trigger: CTGCCCTATTCCACAGAACCATTCCAGGCCTGGACG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTATGGCATCATGGTGCTaGACCTCGGAGACGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARMASWC*TSETAQ
Trigger: CTGGGCCGTCTCCGAGGTCCAGCACCATGATGCCAT...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGAGTGCTCCGTGTGGTTaGAGCTGTAGCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPSAPCG*SCSASQ
Trigger: CTGGCTGGCGCTACAGCTCCAACCACACGGAGCACT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGTGCTTTTCCCTGTCCTaGGTCTGTTCTGTTACATGG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGCFSLS*VCSVTW
Trigger: CCATGTAACAGAACAGACCCAGGACAGGGAAAAGCA...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTCCACAGTTACCACTaGCAGCCTGGCAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVHSYH*QPGKPG
Trigger: GCCAGGCTTGCCAGGCTGCCAGTGGTAACTGTGGAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGTGATCTGTCCAGTGTaGCCTGGGATGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARVICPV*PGMPPP
Trigger: GGGAGGAGGCATCCCAGGCCACACTGGACAGATCAC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCAGCTCTTCCACCACTaGGGTGTAGACATTGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARQLFHH*GVDIGG
Trigger: GCCGCCAATGTCTACACCTCAGTGGTGGAAGAGCTG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCGTAGCCGTTGTTGTCTaGGTAGATGACCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFVAVVV*VDDLLA
Trigger: AGCCAGCAGGTCATCTACTCAGACAACAACGGCTAC...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAATACGTGTAATTCTGTaGTGTCATGTTCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGIRVIL*CHVPVE
Trigger: TTCTACAGGAACATGACAGCACAGAATTACACGTAT...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGATACGTGTAATTCTGTaGTGTCATGTTCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWIRVIL*CHVPVE
Trigger: TTCTACAGGAACATGACAGCACAGAATTACACGTAT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGAGCATGACCTCCACCTaGCCATTCCCTTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPSMTST*PFPWLE
Trigger: CTCCAGCCAAGGGAATGGGCAGGTGGAGGTCATGCT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGAGCGCCAGCCAGGGATaGTCAGGATCTGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFESASQG*SGSAGE
Trigger: TTCACCTGCAGATCCTGAGCATCCCTGGCTGGCGCT...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGATCTGATACACAGATTTaGCTATTCTGGACATTTCAC +
Preference number: 4 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGSDTQI*LFWTFH
Trigger: GTGAAATGTCCAGAATAGGCAAATCTGTGTATCAGA...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCTTCCTCCAGGAGCTaGCGGACCTGGTATTTCTGC +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARPSSRS*RTWYFC
Trigger: GCAGAAATACCAGGTCCGCCAGCTCCTGGAGGAAGG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCGTGAGCTGCAGGATCTaGTCATCAAGGTGCGTCACA +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFVSCRI*SSRCVT
Trigger: TGTGACGCACCTTGATGACCAGATCCTGCAGCTCAC...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGTGAGCTGCAGGATCTaGTCATCAAGGTGCGTCACA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPVSCRI*SSRCVT
Trigger: TGTGACGCACCTTGATGACCAGATCCTGCAGCTCAC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGAGCACAGGTATTGTGTaGATGGATGTTTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWSTGIV*MDVFNS
Trigger: AGAATTGAAAACATCCATCCACACAATACCTGTGCT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGTACTGGGGCTTCTCTaGATTCCCCTGAAGACTCAG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPVLGLL*IPLKTQ
Trigger: CTGAGTCTTCAGGGGAATCCAGAGAAGCCCCAGTAC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACTGTTTTGTGAATGAATaGCGCATGAGTGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYCFVNE*RMSVPN
Trigger: ATTTGGCACACTCATGCGTCATTCATTCACAAAACA...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTTTCTCTGGATTCCCCTaGAGACTCAGATGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPFSGFP*RLRCRR
Trigger: CCTTCGACATCTGAGTCTTCAGGGGAATCCAGAGAA...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGATGCGCTTCGGTGCTaGTGTGAGTCTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARDALRC*CESCAL
Trigger: CAGAGCACAAGACTCACAGCAGCACCGAAGCGCATC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCTCATGCAGCCCACATaGTCTAAAGGGCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFELMQPT*SKGLLP
Trigger: AGGCAGGAGCCCTTTAGAGCATGTGGGCTGCATGAG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGCTCATCTAGGACGATaGAGGCCATCAGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARAHLGR*RPSACA
Trigger: TGCGCAAGCTGATGGCCTCCATCGTCCTAGATGAGC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTCTCTGTTGAGTTCTaGATCTGCGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVSVEF*ICEGTG
Trigger: CCCAGTGCCCTCGCAGATCCAGAACTCAACAGAGAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGTCTATGAAAACACGTaGCACGCAGTAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPVYENT*HAVGPQ
Trigger: CTGTGGACCTACTGCGTGCCACGTGTTTTCATAGAC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGACATCCCTGCTGTGTaGTTTCACCTCTCATGGACT +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPDIPAV*FHLSWT
Trigger: AGTCCATGAGAGGTGAAACCACACAGCAGGGATGTC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCACTCAGGCTGTGGCATaGGTCAGAATTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFTQAVA*VRISFL
Trigger: AAGGAAGGAAATTCTGACGCATGCCACAGCCTGAGT...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTGCCAGGAGAACTGTaGCCGGATCCCAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVPGEL*PDPKCF
Trigger: GAAACATTTGGGATCCGGCCACAGTTCTCCTGGCAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGGGCTGTTGCCAGCATaGGATGAGTCTATGAAAACA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPGLLPA*DESMKT
Trigger: TGTTTTCATAGACTCATCCCATGCTGGCAACAGCCC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGCGTTCCTAACTCAATaGTCTTTCCACCCCACCACC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPAFLTQ*SFHPTT
Trigger: GGTGGTGGGGTGGAAAGACCATTGAGTTAGGAACGC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGGTTTCACATCCCCGTTaGCGTGGTACTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEVSHPR*RGTPGI
Trigger: AATTCCTGGAGTACCACGTCAACGGGGATGTGAAAC...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGTTTCACATCCCCGTTaGCGTGGTACTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARVSHPR*RGTPGI
Trigger: AATTCCTGGAGTACCACGTCAACGGGGATGTGAAAC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCATGGGATGAGTCTATaGAAACACGTGGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEHGMSL*KHVARS
Trigger: ACTGCGTGCCACGTGTTTTCATAGACTCATCCCATG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGGACATGCCTGTTCGGTaGGAAAACACTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPDMPVR*ENTLSS
Trigger: AGAGGACAGAGTGTTTTCTCACCGAACAGGCATGTC...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR TCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCTTGAAATTTGCTCATaGGGGAGGCCTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARLEICS*GRPVPS
Trigger: AGATGGCACAGGCCTCCCTCATGAGCAAATTTCAAG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGTGTCCTTCTGTGAGCTaGAGGATCTGGTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFECPSVS*RIWSSR
Trigger: CCTTGATGACCAGATCCTGCAGCTCACAGAAGGACA...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGTACTGGTCCATGATGTaGGTGAAGATTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEYWSMM*VKISCR
Trigger: GCGGCAGGAAATCTTCACGCACATCATGGACCAGTA...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCCGGTAACTGAGGCCTaGGATTGTGGTCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEPVTEA*DCGQNK
Trigger: CTTATTCTGACCACAATCCCAGGCCTCAGTTACCGG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCGGTAACTGAGGCCTaGGATTGTGGTCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: QSCATIIPQFHHLPKKARPVTEA*DCGQNK
Trigger: CTTATTCTGACCACAATCCCAGGCCTCAGTTACCGG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCAGATTTGCCTATTCTaGACATTTCACATAAACTCG +
Preference number: 4 (lower is better)
Translates to: PNILYVTEEERAGLIECGQICLF*TFHINS
Trigger: CGAGTTTATGTGAAATGTCCAGAATAGGCAAATCTG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCAAGCTGGTCCTTTCTaGGTACTTTCCTTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEQAGPF*VLSFSP
Trigger: AGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR TCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCAAATATCCTTTACGTaGCAGAAGAGGAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEQISFT*QKRRGL
Trigger: CAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTTTTGTGTTTTGTGAATaGATGACGCATGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPFVFCE*MTHECA
Trigger: GGCACACTCATGCGTCATTCATTCACAAAACACAAA...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGTCCATGTTGGCAAACTaGACCGAGGCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFESMLAN*TEALKN
Trigger: GTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGA...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGAATGTAGCAGTCGTTTaGCACAGGCACCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFENVAVV*HRHQVP
Trigger: AGGTACTTGGTGCCTGTGGCAAACGACTGCTACATT...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTAGTAATTCCGGGCGATaGTGTTGTTCACATAGGAAA +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPSNSGR*CCSHRK
Trigger: TTTCCTATGTGAACAACAGCATCGCCCGGAATTACT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGAGAAACCAAGCCTCATaGAGCCCACATGCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFERNQAS*SPHALK
Trigger: CTTTAGAGCATGTGGGCTGCATGAGGCTTGGTTTCT...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGAAAATCCTGACCTGTTaGAGAAAGGGATGTGGGACG +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPKILTC*RKGCGT
Trigger: CGTCCCACATCCCTTTCTCCAACAGGTCAGGATTTT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR TCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGATTCCAGTAAAATCCTaGCCTGTTGGAGAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPIPVKS*PVGERD
Trigger: ATCCCTTTCTCCAACAGGTCAGGATTTTACTGGAAT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGAGTAATTCCGGGCGATaGTGTTGTTCACATAGGAAA +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPSNSGR*CCSHRK
Trigger: TTTCCTATGTGAACAACAGCATCGCCCGGAATTACT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTCAGGTATTGTGTGGATaGATGTTTTCAATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPQVLCG*MFSILL
Trigger: CAAGAGAATTGAAAACATCCATCCACACAATACCTG...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTAGCACAGGTATTGTGTaGATGGATGTTTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPSTGIV*MDVFNS
Trigger: AGAATTGAAAACATCCATCCACACAATACCTGTGCT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTGTCTTAATTCATCTGTaGATGGACATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPVLIHL*MDIWVV
Trigger: AACAACCCAAATGTCCATCCACAGATGAATTAAGAC...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR GCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCTGATACACAGATTTaGCTATTCTGGACATTTCAC +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPSDTQI*LFWTFH
Trigger: GTGAAATGTCCAGAATAGGCAAATCTGTGTATCAGA...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGCAGGTATTGTGTGGATaGATGTTTTCAATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TKLCNHHSTISSSSKESPQVLCG*MFSILL
Trigger: CAAGAGAATTGAAAACATCCATCCACACAATACCTG...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CCA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCAGATTTGCCTATTCTaGACATTTCACATAAACTCG +
Preference number: 4 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEQICLF*TFHINS
Trigger: CGAGTTTATGTGAAATGTCCAGAATAGGCAAATCTG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CCA 90 bp CCCAGCCCACGTCCATGTGGCTGTGGGGCACCACGAAGGCCCGGATaGGGCCGGCGGACTGGACCCCTGGCGGTCGCAGCAACAGGAGCG +
Preference number: 5 (lower is better)
Translates to: PSPRPCGCGAPRRPG*GRRTGPLAVAATGA
Trigger: CGCTCCTGTTGCTGCGACCGCCAGGGGTCCAGTCCGCCGGCCCCATCCGGGCCTTCGTGGTGCCCCACAGCCACATGGACGTGGGCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp GGCGCAGTCCCAGCGAGGTCTCCGAACAGCACCACGGGCCTGTGCTaGAGCGCCAGTGCGCTCCTCTGGCGCAGGGCAGTGGTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: GAVPARSPNSTTGLC*SASALLWRRAVVRD
Trigger: GTCCCTCACCACTGCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCTGTTCGGAGACCTCGCTGGGACTGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp TTCGGCGCAGTCCCAGCGAGGTCTCCGAACAGCACCACGGGCCTGTaGTGCAGCGCCAGTGCGCTCCTCTGGCGCAGGGCAGTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: FGAVPARSPNSTTGL*CSASALLWRRAVVR
Trigger: CCTCACCACTGCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCTGTTCGGAGACCTCGCTGGGACTGCGCCGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp CCGCATGGCTGGTGCGTCTCCTCAGCCTGCGGCCAAATTGAAGGGTaGTCGCCACAGTGGCAGCCGGCTCCTGGGTGCCCTCTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: PHGWCVSSACGQIEG*SPQWQPAPGCPLGP
Trigger: GGGCCCAAGAGGGCACCCAGGAGCCGGCTGCCACTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCACCAGCCATGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS-3UTR CAA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGGAGCCGAGGTGGGCATaGAAGCCCGCCAGCGCAAAT +
Preference number: 5 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVEPRWA*KPASAN
Trigger: ATTTGCGCTGGCGGGCTTCAATGCCCACCTCGGCTC...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTCTCCAGGGGGCCGGCTaGGTACTCCTGCTCTATCCG +
Preference number: 5 (lower is better)
Translates to: QPGKPGRARTADALRCCCLQGAG*VLLLYP
Trigger: CGGATAGAGCAGGAGTACCAAGCCGGCCCCCTGGAG...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS GCA 90 bp TGCTGGTCCGAGGCGACGCCATCCCACCACAGCCGGAAAAACTCCTaGTCCACAGCGATGAACCGGCGCTGCTGGCCGCGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: CWSEATPSHHSRKNS*STAMNRRCWPRASS
Trigger: AGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCATCGCTGTGGAGCAGGAGTTTTTCCGGCTGTGGTGGGATGGCGTCGCCTCGGACCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp GTGTCACCTCTGTGGCGGCCAGGCCCCGTCCTCCAGCTCCAGCGGTaGAGCATGCTCAAATCCCAGGTCCCTGTGAGCGAGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VSPLWRPGPVLQLQR*SMLKSQVPVSERSS
Trigger: GGAGGAGCGCTCGCTCACAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGAGCTGGAGGACGGGGCCTGGCCGCCACAGAGGTGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000504248.5
CDS-3UTR CAA 90 bp CAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCTGCTGTTCGGCAGCATGGCTGTaGATGTGGTCCAGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: QPGKPGRARTADALRCCCSAAWL*MWSSSG
Trigger: CCCGCTGCTGGACCACATCAACAGCCATGCTGCCGA...ACAGCAGCACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS TCA 90 bp CGACGCCATCCCACCACAGCCGGAAAAACTCCTGCTCCACAGCGATaGACCGGCGCTGCTGGCCGCGGGCCAGCTCTTCCACCACTGAGG +
Preference number: 5 (lower is better)
Translates to: RRHPTTAGKTPAPQR*TGAAGRGPALPPLR
Trigger: CCTCAGTGGTGGAAGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCATCGCTGTGGAGCAGGAGTTTTTCCGGCTGTGGTGGGATGGCGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 90 bp TGGCTGCCTTCAGGTCGTAGTCGATCCGGGAGCCGAGGTGGGCATTaGAGCCCGCCAGCGCAAATAGGGTGGGCGTCGTGGCAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: WLPSGRSRSGSRGGH*SPPAQIGWASWQRR
Trigger: GCGCCTCTGCCACGACGCCCACCCTATTTGCGCTGGCGGGCTTCAATGCCCACCTCGGCTCCCGGATCGACTACGACCTGAAGGCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 90 bp CCCGGCATACAACAAGGCGCTGGCTCGCCGGGCCAGCCCCTTCAGTaGGCTGCGGGACGTGTAGAAGCCCGTCCAGGCCTGGAATGGTTC +
Preference number: 5 (lower is better)
Translates to: PGIQQGAGSPGQPLQ*AAGRVEARPGLEWF
Trigger: GAACCATTCCAGGCCTGGACGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCCCGGCGAGCCAGCGCCTTGTTGTATGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp AGCTGGCCGCCATGGGTGCCTGGGGCTGGAGCTCATCTAGGACGATaGAGGCCATCAGCTTGCGCATGCCCAGCATCCCCGAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: SWPPWVPGAGAHLGR*RPSACACPASPRPG
Trigger: ACCTGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGGCCTCCATCGTCCTAGATGAGCTCCAGCCCCAGGCACCCATGGCGGCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp CCTGCAGGTCCTGCATCGGAGCTGGCCGCCATGGGTGCCTGGGGCTaGAGCTCATCTAGGACGATGGAGGCCATCAGCTTGCGCATGCCC +
Preference number: 5 (lower is better)
Translates to: PAGPASELAAMGAWG*SSSRTMEAISLRMP
Trigger: GGGCATGCGCAAGCTGATGGCCTCCATCGTCCTAGATGAGCTCCAGCCCCAGGCACCCATGGCGGCCAGCTCCGATGCAGGACCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp CGTCCGGATTTCCTTTGGGTGGACGGTGATGATGGGGCCTCCTGGTaGCCTCGAGGGAGAGGTGGTGTCACCTCTGTGGCGGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RPDFLWVDGDDGASW*PRGRGGVTSVAARP
Trigger: GGGCCTGGCCGCCACAGAGGTGACACCACCTCTCCCTCGAGGCCACCAGGAGGCCCCATCATCACCGTCCACCCAAAGGAAATCCGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000504248.5
CDS-3UTR CAA 90 bp AGAAGGGCGGGGTGGGGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGTCTCCTCTCCCCACATaGCTCAGGTGGCCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: RRAGWGPYQRPFGRKPSWSPLPT*LRWPRA
Trigger: GGCACGGGGCCACCTGAGCAATGTGGGGAGAGGAGA...CCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCCCCACCCCGCCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS TCA 90 bp AGCGATGAACCGGCGCTGCTGGCCGCGGGCCAGCTCTTCCACCACTaGGGTGTAGACATTGGCGGCGTACGCCCGCATGCTTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SDEPALLAAGQLFHH*GVDIGGVRPHAFLH
Trigger: GTGCAGGAAAGCATGCGGGCGTACGCCGCCAATGTCTACACCTCAGTGGTGGAAGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCATCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp CAGGCACCAAGTACCTGCCCGCATGGCTGGTGCGTCTCCTCAGCCTaGGGCCAAATTGAAGGGTGCTCGCCACAGTGGCAGCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QAPSTCPHGWCVSSA*GQIEGCSPQWQPAP
Trigger: AGGAGCCGGCTGCCACTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS-3UTR CAA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTACATGTCTCTCACCTaGGGGGACTCAGTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVYMSLT*GDSVPV
Trigger: CACTGGGACTGAGTCCCCCAAGGTGAGAGACATGTA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGTGCTGGCTGTTTAGGTaGGTGCTGGTCCTCAGGACA +
Preference number: 5 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVCWLFR*VLVLRT
Trigger: TGTCCTGAGGACCAGCACCAACCTAAACAGCCAGCA...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCCAGCGTCACGGCCTCTaGCTGCTGGGGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GLELSLGATTSSPALWQSQRHGL*LLGSWE
Trigger: CTCCCAGGACCCCAGCAGCAAGAGGCCGTGACGCTG...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS GCA 90 bp CATACAACAAGGCGCTGGCTCGCCGGGCCAGCCCCTTCAGTGAGCTaGGGGACGTGTAGAAGCCCGTCCAGGCCTGGAATGGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: HTTRRWLAGPAPSVS*GTCRSPSRPGMVLW
Trigger: CCACAGAACCATTCCAGGCCTGGACGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCCCGGCGAGCCAGCGCCTTGTTGTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp GCTGCTGGCCGCGGGCCAGCTCTTCCACCACTGAGGTGTAGACATTaGCGGCGTACGCCCGCATGCTTTCCTGCACAGTGTAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: AAGRGPALPPLRCRH*RRTPACFPAQCRPS
Trigger: GCTGGGTCTACACTGTGCAGGAAAGCATGCGGGCGTACGCCGCCAATGTCTACACCTCAGTGGTGGAAGAGCTGGCCCGCGGCCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp GCTTGGTACTCCTGCTCTATCCGGTGGCAGAGCAGCTCCCCGTCATaGCCCTGCGGCACATGGGTGAGCCGGGAGCGGATTGCATACGTG +
Preference number: 5 (lower is better)
Translates to: AWYSCSIRWQSSSPS*PCGTWVSRERIAYV
Trigger: CACGTATGCAATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCATGACGGGGAGCTGCTCTGCCACCGGATAGAGCAGGAGTACCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS CCA 90 bp GAACGTCCGGATTTCCTTTGGGTGGACGGTGATGATGGGGCCTCCTaGTGGCCTCGAGGGAGAGGTGGTGTCACCTCTGTGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ERPDFLWVDGDDGAS*WPRGRGGVTSVAAR
Trigger: CCTGGCCGCCACAGAGGTGACACCACCTCTCCCTCGAGGCCACCAGGAGGCCCCATCATCACCGTCCACCCAAAGGAAATCCGGACGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000504248.5
CDS GCA 90 bp GGCCATCAGCTTGCGCATGCCCAGCATCCCCGAGGCCAGGTGCGTTaGGTACATGTCTCTCACCTTGGGGGACTCAGTCCCAGTGATGGC +
Preference number: 5 (lower is better)
Translates to: GHQLAHAQHPRGQVR*VHVSHLGGLSPSDG
Trigger: GCCATCACTGGGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp AAATGTCCTGCAGGTCCTGCATCGGAGCTGGCCGCCATGGGTGCCTaGGGCTGGAGCTCATCTAGGACGATGGAGGCCATCAGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KCPAGPASELAAMGA*GWSSSRTMEAISLR
Trigger: GCGCAAGCTGATGGCCTCCATCGTCCTAGATGAGCTCCAGCCCCAGGCACCCATGGCGGCCAGCTCCGATGCAGGACCTGCAGGACATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGCTCCAGGGGGCCGGCTaGGTACTCCTGCTCTATCCG +
Preference number: 5 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWLQGAG*VLLLYP
Trigger: CGGATAGAGCAGGAGTACCAAGCCGGCCCCCTGGAG...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCAGGTCCCAGTCGAAGTaGTTCCACAGCCGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: GLELSLGATTSSPALWQSRSQSK*FHSRRW
Trigger: CCACCGGCGGCTGTGGAACAACTTCGACTGGGACCT...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGCCCACGCTGGCCTCCTaGCTTCCCAGGGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASPTLAS*LPRAGW
Trigger: CCAGCCTGCCCTGGGAAGCAAGGAGGCCAGCGTGGG...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS TCA 90 bp GTAGCTGTACTGGTCCATGATGTGCGTGAAGATTTCCTGCCGCTCTaGGAGGGATGGGGACCCTCGCCACACGAACTGCAGCCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: VAVLVHDVREDFLPL*EGWGPSPHELQPPG
Trigger: GCCCGGGGGCTGCAGTTCGTGTGGCGAGGGTCCCCATCCCTCTCAGAGCGGCAGGAAATCTTCACGCACATCATGGACCAGTACAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 90 bp GCGTGGCATACTGCACCGAGACACCGAGCTCGGCAGCATGGCTGTTaGTGTGGTCCAGCAGCGGGTCCATGTTGGCAAACTGCACCGAGG +
Preference number: 5 (lower is better)
Translates to: AWHTAPRHRARQHGC*CGPAAGPCWQTAPR
Trigger: CCTCGGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGTATGCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS GCA 90 bp ATGGAGGCCATCAGCTTGCGCATGCCCAGCATCCCCGAGGCCAGGTaGGTTGCGTACATGTCTCTCACCTTGGGGGACTCAGTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: MEAISLRMPSIPEAR*VAYMSLTLGDSVPV
Trigger: CACTGGGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGGCCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp GGGGCTGGAGCTCATCTAGGACGATGGAGGCCATCAGCTTGCGCATaGCCAGCATCCCCGAGGCCAGGTGCGTTGCGTACATGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GAGAHLGRWRPSACA*PASPRPGALRTCLS
Trigger: TGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGGCCTCCATCGTCCTAGATGAGCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp AGCAGTCGTTTGCCACAGGCACCAAGTACCTGCCCGCATGGCTGGTaGGTCTCCTCAGCCTGCGGCCAAATTGAAGGGTGCTCGCCACAG +
Preference number: 5 (lower is better)
Translates to: SSRLPQAPSTCPHGW*VSSACGQIEGCSPQ
Trigger: CTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp TCTGAGAGTGCTCCGTGTGGTTGGAGCTGTAGCGCCAGCCAGGGATaGTCAGGATCTGCAGGTGAAGATTCGGGGGCAGCGTCACGGCCT +
Preference number: 5 (lower is better)
Translates to: SESAPCGWSCSASQG*SGSAGEDSGAASRP
Trigger: AGGCCGTGACGCTGCCCCCGAATCTTCACCTGCAGATCCTGAGCATCCCTGGCTGGCGCTACAGCTCCAACCACACGGAGCACTCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp TCGCCCAGCGTGGCATACTGCACCGAGACACCGAGCTCGGCAGCATaGCTGTTGATGTGGTCCAGCAGCGGGTCCATGTTGGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SPSVAYCTETPSSAA*LLMWSSSGSMLANC
Trigger: GCAGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGTATGCCACGCTGGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGGAGCCGAGGTGGGCATaGAAGCCCGCCAGCGCAAAT +
Preference number: 5 (lower is better)
Translates to: PFPIGLVPASLTPRGGRREPRWA*KPASAN
Trigger: ATTTGCGCTGGCGGGCTTCAATGCCCACCTCGGCTC...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCCAGCCTGCGGCCAAATaGAAGGGTGCTCGCCACAGT +
Preference number: 5 (lower is better)
Translates to: GLELSLGATTSSPALWQSQPAAK*KGARHS
Trigger: ACTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCTG...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGAGGTCCCAGTCGAAGTaGTTCCACAGCCGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRRSQSK*FHSRRW
Trigger: CCACCGGCGGCTGTGGAACAACTTCGACTGGGACCT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTCCCCTTGCAGGGCTGTaGCCAGCATGGGATGAGTCT +
Preference number: 5 (lower is better)
Translates to: PEGMPWGWASILGGSRPLPLAGL*PAWDES
Trigger: AGACTCATCCCATGCTGGCAACAGCCCTGCAAGGGG...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGGGGAGGTGTGGCATTTaGAGCTGCCCACCCCACCGC +
Preference number: 5 (lower is better)
Translates to: SRAERATSAKRGTWKGTRGRCGI*SCPPHR
Trigger: GCGGTGGGGTGGGCAGCTCAAAATGCCACACCTCCC...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCAGGCACTTGGCCTGGTaGGTGACTCTGGGGAGGCAT +
Preference number: 5 (lower is better)
Translates to: GLELSLGATTSSPALWQSRHLAW*VTLGRH
Trigger: ATGCCTCCCCAGAGTCACCAACCAGGCCAAGTGCCT...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTGAGTGGAGGAGGCACTaGGCCTGGTTGGTGACTCTG +
Preference number: 5 (lower is better)
Translates to: PEGMPWGWASILGGSRPLEWRRH*AWLVTL
Trigger: CAGAGTCACCAACCAGGCCAAGTGCCTCCTCCACTC...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS TCA 90 bp TCCGGTGGCAGAGCAGCTCCCCGTCATGGCCCTGCGGCACATGGGTaGGCCGGGAGCGGATTGCATACGTGTAATTCTGTGCTGTCATGT +
Preference number: 5 (lower is better)
Translates to: SGGRAAPRHGPAAHG*AGSGLHTCNSVLSC
Trigger: ACATGACAGCACAGAATTACACGTATGCAATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCATGACGGGGAGCTGCTCTGCCACCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS TCA 90 bp GCAGAAGCCAGAGCACTGGGTGGACGACTGAGGTGTCGTTCAGCGTaGGGTTGTAGCCCAGGTCCCAGTCGAAGTTGTTCCACAGCCGCC +
Preference number: 5 (lower is better)
Translates to: AEARALGGRLRCRSA*GCSPGPSRSCSTAA
Trigger: GGCGGCTGTGGAACAACTTCGACTGGGACCTGGGCTACAACCTCACGCTGAACGACACCTCAGTCGTCCACCCAGTGCTCTGGCTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp TGTAGCAGTCGTTTGCCACAGGCACCAAGTACCTGCCCGCATGGCTaGTGCGTCTCCTCAGCCTGCGGCCAAATTGAAGGGTGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: CSSRLPQAPSTCPHG*CVSSACGQIEGCSP
Trigger: TGGCGAGCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCCGAGGCCAGGTGCGTaGCGTACATGTCTCTCACCT +
Preference number: 5 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRPRPGA*RTCLSP
Trigger: AGGTGAGAGACATGTACGCAACGCACCTGGCCTCGG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCACTGGCAGCCTGGCAAGCCTGGCAGGGCCCGGACGGCAGATGCGCTTCGGTGCAGGGCTCACTGCTGTaGAAAGTGAATAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: PLAAWQAWQGPDGRCASVQGSLL*KVNKER
Trigger: ACGTTCTTTATTCACTTTCAACAGCAGTGAGCCCTG...CACCGAAGCGCATCTGCCGTCCGGGCCCTGCCAGGCTTGCCAGGCTGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTGAAGGCATGCCCTGGGGTTGGGCTTCGATCTTGGGAGGGAGCCGTCCACTTCATACCAGCGTCCATTaGGGAGGAAGCCCTCGTGGA +
Preference number: 5 (lower is better)
Translates to: PEGMPWGWASILGGSRPLHTSVH*GGSPRG
Trigger: TCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATG...AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCACTCCTGTGGGCCTCTaGGCGTTTCTGCCCACCCTG +
Preference number: 5 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVTPVGL*AFLPTL
Trigger: CAGGGTGGGCAGAAACGCCAAGAGGCCCACAGGAGT...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS TCA 90 bp TGTGGTCCAGCAGCGGGTCCATGTTGGCAAACTGCACCGAGGCATTaGAGAACTGCTTGTCACATCCCCAGGGCCAGAGGACGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: CGPAAGPCWQTAPRH*RTACHIPRARGRAV
Trigger: CACCGCACGTCCTCTGGCCCTGGGGATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS TCA 90 bp CCATTTCCACAGCTTCCCACGCAGGCACCGCGGCCTTGCCCGGTGTaGACAGGTAGTTATCGGAAATGGGGCCCTGTTTCACATCCCCGT +
Preference number: 5 (lower is better)
Translates to: PFPQLPTQAPRPCPV*TGSYRKWGPVSHPR
Trigger: ACGGGGATGTGAAACAGGGCCCCATTTCCGATAACTACCTGTTCACACCGGGCAAGGCCGCGGTGCCTGCGTGGGAAGCTGTGGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS CCA 90 bp CTTCACGTTGGCCACCAGGGCCTCGGCATAGAGGTTGATGTTGGCTaGGGTGACAGGCTCACTCATGTTGGGGTACACCCCATCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LHVGHQGLGIEVDVG*GDRLTHVGVHPILG
Trigger: CCCCAAGATGGGGTGTACCCCAACATGAGTGAGCCTGTCACCCCAGCCAACATCAACCTCTATGCCGAGGCCCTGGTGGCCAACGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CCA 90 bp GCATACTGCACCGAGACACCGAGCTCGGCAGCATGGCTGTTGATGTaGTCCAGCAGCGGGTCCATGTTGGCAAACTGCACCGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: AYCTETPSSAAWLLM*SSSGSMLANCTEAL
Trigger: CAATGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CCA 90 bp CCCCTCGATGGCCTTTCCGGAGATTCTGAGAGTGCTCCGTGTGGTTaGAGCTGTAGCGCCAGCCAGGGATGCTCAGGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: PLDGLSGDSESAPCG*SCSASQGCSGSAGE
Trigger: TTCACCTGCAGATCCTGAGCATCCCTGGCTGGCGCTACAGCTCCAACCACACGGAGCACTCTCAGAATCTCCGGAAAGGCCATCGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTGCCCTCTGCTTCACGTaGGCCACCAGGGCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSALCFT*ATRASA
Trigger: TGCCGAGGCCCTGGTGGCCAACGTGAAGCAGAGGGC...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCACACGCCAGGTGACATaGAGAGCGTGCAGGGCACGG +
Preference number: 5 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFTRQVT*RACRAR
Trigger: CCGTGCCCTGCACGCTCTCAATGTCACCTGGCGTGT...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCCCTGGGAGATGGAGGTaGCAGCCAGCTGAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFPGRWR*QPAESA
Trigger: TGCGCTCTCAGCTGGCTGCAACCTCCATCTCCCAGG...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGATCCCAACCGTCTCCTaGTCTCAGGGCCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRIPTVS*SQGLGA
Trigger: AGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGAT...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCCACCACCGTCCACGTaGGGCAGGGAGTCATGGTGT +
Preference number: 5 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVPPPST*GRESWC
Trigger: ACACCATGACTCCCTGCCCAACGTGGACGGTGGTGG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TCAATGGTCTTTCCACCCCACCACCGTCCACGTTGGGCAGGGAGTCATGGTGTCGGTTGGGCTTCGATCTaGGGAGGGAGCCGTCCACTT +
Preference number: 5 (lower is better)
Translates to: SMVFPPHHRPRWAGSHGVGWASI*GGSRPL
Trigger: AAGTGGACGGCTCCCTCCCAAGATCGAAGCCCAACC...GACACCATGACTCCCTGCCCAACGTGGACGGTGGTGGGGTGGAAAGACCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS GCA 90 bp CGAGCAGCACAATGTAGCAGTCGTTTGCCACAGGCACCAAGTACCTaGCCGCATGGCTGGTGCGTCTCCTCAGCCTGCGGCCAAATTGAA +
Preference number: 5 (lower is better)
Translates to: RAAQCSSRLPQAPST*PHGWCVSSACGQIE
Trigger: TTCAATTTGGCCGCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTACATTGTGCTGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp GAGCATGACCTCCACCTGCCCATTCCCTTGGCTGGAGATGCCATGTaGCCGCTCCGACAGCAACACAAGCCTGCTTTTGCCATCCTCCAT +
Preference number: 5 (lower is better)
Translates to: EHDLHLPIPLAGDAM*PLRQQHKPAFAILH
Trigger: ATGGAGGATGGCAAAAGCAGGCTTGTGTTGCTGTCGGAGCGGGCACATGGCATCTCCAGCCAAGGGAATGGGCAGGTGGAGGTCATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp GGGCCCTGTTTCACATCCCCGTTGACGTGGTACTCCAGGAATTCCTaGGTCACGCGCACCGTTCGGTTACTCTGTCTCTCCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: GPCFTSPLTWYSRNS*VTRTVRLLCLSQML
Trigger: CAGCATCTGGGAGAGACAGAGTAACCGAACGGTGCGCGTGACCCAGGAATTCCTGGAGTACCACGTCAACGGGGATGTGAAACAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGGCATTGAAGAACTGCTaGTCACATCCCCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWALKNC*SHPQGQ
Trigger: CTGGCCCTGGGGATGTGACAAGCAGTTCTTCAATGC...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGACACGCCAGGTGACATaGAGAGCGTGCAGGGCACGG +
Preference number: 5 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWTRQVT*RACRAR
Trigger: CCGTGCCCTGCACGCTCTCAATGTCACCTGGCGTGT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGCAGATGGGGTCTCTGTaGAGTTCTGGATCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWQMGSL*SSGSAR
Trigger: CCTCGCAGATCCAGAACTCAACAGAGACCCCATCTG...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCAGCCTGCGGCCAAATaGAAGGGTGCTCGCCACAGT +
Preference number: 5 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVQPAAK*KGARHS
Trigger: ACTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCTG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGCACCTGCCCATTCCCTaGGCTGGAGATGCCATGTGC +
Preference number: 5 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVHLPIP*AGDAMC
Trigger: GCACATGGCATCTCCAGCCAAGGGAATGGGCAGGTG...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCCCCCTTGCAGGGCTGTaGCCAGCATGGGATGAGTCT +
Preference number: 5 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFPLAGL*PAWDES
Trigger: AGACTCATCCCATGCTGGCAACAGCCCTGCAAGGGG...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGGCTGAGAGCGCACCATaGCACTCCAGCCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGAESAP*HSSLGD
Trigger: GTCCCCCAGGCTGGAGTGCAATGGTGCGCTCTCAGC...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS TCA 90 bp CGTAGGGCCTCCGCTGCATCTGGTAGCCGTTGTTGTCTGAGTAGATaGCCTGCTGGCTGTTTAGGTTGGTGCTGGTCCTCAGGACAGCCT +
Preference number: 5 (lower is better)
Translates to: RRASAASGSRCCLSR*PAGCLGWCWSSGQP
Trigger: AGGCTGTCCTGAGGACCAGCACCAACCTAAACAGCCAGCAGGTCATCTACTCAGACAACAACGGCTACCAGATGCAGCGGAGGCCCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS TCA 90 bp GTGCCCGCTCCGACAGCAACACAAGCCTGCTTTTGCCATCCTCCATaGAGGCCGACTGAACCATGGGGTAGTAATTCCGGGCGATGCTGT +
Preference number: 5 (lower is better)
Translates to: VPAPTATQACFCHPP*RPTEPWGSNSGRCC
Trigger: ACAGCATCGCCCGGAATTACTACCCCATGGTTCAGTCGGCCTTCATGGAGGATGGCAAAAGCAGGCTTGTGTTGCTGTCGGAGCGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp GTGAGCTGCAGGATCTGGTCATCAAGGTGCGTCACAGCCTCGTCATaGATGACCTGGCCTCCGATGACAAATTCCAGGCGTCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VSCRIWSSRCVTASS*MTWPPMTNSRRPSS
Trigger: GGAGGAAGGACGCCTGGAATTTGTCATCGGAGGCCAGGTCATGCATGACGAGGCTGTGACGCACCTTGATGACCAGATCCTGCAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 90 bp CATCAGGTTGGTATCCTGGTCGAGCAGCACAATGTAGCAGTCGTTTaGCACAGGCACCAAGTACCTGCCCGCATGGCTGGTGCGTCTCCT +
Preference number: 5 (lower is better)
Translates to: HQVGILVEQHNVAVV*HRHQVPARMAGASP
Trigger: AGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTACATTGTGCTGCTCGACCAGGATACCAACCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp AGGATCTGGTCATCAAGGTGCGTCACAGCCTCGTCATGCATGACCTaGCCTCCGATGACAAATTCCAGGCGTCCTTCCTCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RIWSSRCVTASSCMT*PPMTNSRRPSSRSW
Trigger: CCAGCTCCTGGAGGAAGGACGCCTGGAATTTGTCATCGGAGGCCAGGTCATGCATGACGAGGCTGTGACGCACCTTGATGACCAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp GCTCTGATCATGGAAGAACAGGTGCTCTGTGGGCCCCAGGGTCTGTaGGTCTCTCTCCCAGCTCTGAACTTAGCTCCCAACCAACGTGAC +
Preference number: 5 (lower is better)
Translates to: ALIMEEQVLCGPQGL*VSLPALNLAPNQRD
Trigger: GTCACGTTGGTTGGGAGCTAAGTTCAGAGCTGGGAGAGAGACCCACAGACCCTGGGGCCCACAGAGCACCTGTTCTTCCATGATCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504960.1
CDS-3UTR CAA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGCCATCTTGGGGAGGCTaGGGGAAGACAGCCACGCCA +
Preference number: 5 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKPSWGG*GKTATP
Trigger: TGGCGTGGCTGTCTTCCCCAAGCCTCCCCAAGATGG...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGTCGGCAGCATGGCTGTaGATGTGGTCCAGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGSAAWL*MWSSSG
Trigger: CCCGCTGCTGGACCACATCAACAGCCATGCTGCCGA...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGTACATGTCTCTCACCTaGGGGGACTCAGTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: SRAERATSAKRGTWKGTRYMSLT*GDSVPV
Trigger: CACTGGGACTGAGTCCCCCAAGGTGAGAGACATGTA...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACCGAGGCCAGGTGCGTaGCGTACATGTCTCTCACCT +
Preference number: 5 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGPRPGA*RTCLSP
Trigger: AGGTGAGAGACATGTACGCAACGCACCTGGCCTCGG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTTTCCCAATAGGCCTTGTCCCAGCCTCCCTTACACCTAGGGGAGGCAGGAGGCAATGTAGCAGTCGTTaGCCACAGGCACCAAGTACC +
Preference number: 5 (lower is better)
Translates to: PFPIGLVPASLTPRGGRRQCSSR*PQAPST
Trigger: GGTACTTGGTGCCTGTGGCAAACGACTGCTACATTG...CCTCCTGCCTCCCCTAGGTGTAAGGGAGGCTGGGACAAGGCCTATTGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp GGGCTGGAACTCTCGCTAGGCGCTACAACTTCCTCTCCTGCCCTGTGGCAGAGCAACCAGAGACTGTCTTaGCTGTCTGGTGGCCAAACT +
Preference number: 5 (lower is better)
Translates to: GLELSLGATTSSPALWQSNQRLS*LSGGQT
Trigger: AGTTTGGCCACCAGACAGCAAAGACAGTCTCTGGTT...GCTCTGCCACAGGGCAGGAGAGGAAGTTGTAGCGCCTAGCGAGAGTTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGCCCTCGTGGATCTCTTaGCCAAGGCAGTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SRAERATSAKRGTWKGTRPSWIS*PRQFLG
Trigger: CCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGG...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGCCTTGTCTCAGGGCCTaGGTGCTTCCATCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWPCLRA*VLPSVK
Trigger: TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGG...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGAGGCATGCCCTGGGGTaGGGCTTCGATCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGRHALG*GFDLGR
Trigger: CCTCCCAAGATCGAAGCCCAACCCCAGGGCATGCCT...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGAATTCCTCATGGGTGTaGCCCTCAAAGCCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWNSSWV*PSKPKS
Trigger: GCTCTTGGGCTTTGAGGGCAACACCCATGAGGAATT...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS GCA 90 bp CTCCCCGTCATGGCCCTGCGGCACATGGGTGAGCCGGGAGCGGATTaGATACGTGTAATTCTGTGCTGTCATGTTCCTGTAGAAGTACTG +
Preference number: 5 (lower is better)
Translates to: LPVMALRHMGEPGAD*IRVILCCHVPVEVL
Trigger: CAGTACTTCTACAGGAACATGACAGCACAGAATTACACGTATGCAATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCATGACGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp CGTCGTGGCAGAGGCGCCAAACGGGTCAACGTGCCAGGAGAACTGTaGCCGGATCCCAAATGTTTCATAGAGAAACCCGTGTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RRGRGAKRVNVPGEL*PDPKCFIEKPVSFC
Trigger: ACAGAAGGACACGGGTTTCTCTATGAAACATTTGGGATCCGGCCACAGTTCTCCTGGCACGTTGACCCGTTTGGCGCCTCTGCCACGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp GGCCCCTGCAGTGGGTCTGATGTTGTAGTGCCGGTAACTGAGGCCTaGGATTGTGGTCAGAATAAGCAGGTCATACGCAGATGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GPCSGSDVVVPVTEA*DCGQNKQVIRRWGL
Trigger: GAGACCCCATCTGCGTATGACCTGCTTATTCTGACCACAATCCCAGGCCTCAGTTACCGGCACTACAACATCAGACCCACTGCAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 90 bp GCTGTCATGTTCGTCTGCTCTGATCATGGAAGAACAGGTGCTCTGTaGGCCCCAGGGTCTGTGGGTCTCTCTCCCAGCTCTGAACTTAGC +
Preference number: 5 (lower is better)
Translates to: AVMFVCSDHGRTGAL*APGSVGLSPSSELS
Trigger: GCTAAGTTCAGAGCTGGGAGAGAGACCCACAGACCCTGGGGCCCACAGAGCACCTGTTCTTCCATGATCAGAGCAGACGAACATGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504960.1
CDS-3UTR CAA 90 bp CATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGGTACTGGGAGCAGCGGGTCCATGTaGGCAAACTGCACCGAGGCA +
Preference number: 5 (lower is better)
Translates to: HERGGGWPSKTSWRKGTGSSGSM*ANCTEA
Trigger: TGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCT...CCCAGTACCTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTCACCTGCCCATTCCCTaGGCTGGAGATGCCATGTGC +
Preference number: 5 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSHLPIP*AGDAMC
Trigger: GCACATGGCATCTCCAGCCAAGGGAATGGGCAGGTG...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp AGCAGAGAACCAAGACAGCAGCAGGGCAGACACACCACGAACTCGGTGTCCTCAGCTAAGACAGGCAGATaGCTTGAGGCCAGACGTTCG +
Preference number: 5 (lower is better)
Translates to: SREPRQQQGRHTTNSVSSAKTGR*LEARRS
Trigger: CGAACGTCTGGCCTCAAGCAATCTGCCTGTCTTAGC...TGAGGACACCGAGTTCGTGGTGTGTCTGCCCTGCTGCTGTCTTGGTTCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGGGCATCCTGGGGAGCTaGAGCAGGTGCTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: PNILYVTEEERAGLIECGGILGS*SRCWPE
Trigger: CTCTGGCCAGCACCTGCTCAAGCTCCCCAGGATGCC...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGAGGGCAATTCATAGGTaGGTCCTGGCCCTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWRAIHR*VLALVA
Trigger: GGCCACTAGGGCCAGGACCAACCTATGAATTGCCCT...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS GCA 90 bp GCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGATCTCTTTaGCAAGGCAGTTTCTTGGGGCTTCATCTAGGGTTTGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: AHTSVHLGGSPRGSL*QGSFLGLHLGFASL
Trigger: CAGGGAAGCAAACCCTAGATGAAGCCCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp TGGGCAGGGAGTCATGGTGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGAACTGCACCGAGGCATaGAAGAACTGCTTGTCACAT +
Preference number: 5 (lower is better)
Translates to: WAGSHGVHPNRLLVSGPWNCTEA*KNCLSH
Trigger: ATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTT...CCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACACCATGACTCCCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGATGGAGGCCATCAGCTaGCGCATGCCCAGCATCCCC +
Preference number: 5 (lower is better)
Translates to: PNILYVTEEERAGLIECGMEAIS*RMPSIP
Trigger: GGGGATGCTGGGCATGCGCAAGCTGATGGCCTCCAT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGACAGATGGGGTCTCTGTaGAGTTCTGGATCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGQMGSL*SSGSAR
Trigger: CCTCGCAGATCCAGAACTCAACAGAGACCCCATCTG...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp GGCAAGGCCTTTCTGGCCACTACTGCTGAGCCCTACCCTGCCTTGAAATTTGCTTGCTGGCTGTTTAGGTaGGTGCTGGTCCTCAGGACA +
Preference number: 5 (lower is better)
Translates to: GKAFLATTAEPYPALKFACWLFR*VLVLRT
Trigger: TGTCCTGAGGACCAGCACCAACCTAAACAGCCAGCA...AGCAAATTTCAAGGCAGGGTAGGGCTCAGCAGTAGTGGCCAGAAAGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp GCGAGGATCATGAAAGAGGAGGTGGGTGGCCCAGTAAGACATCATGGCGAAAAGCCGACTGTAGTAGATTaGGGAGGGCTGCGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: ARIMKEEVGGPVRHHGEKPTVVD*GGLRVQ
Trigger: CTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG...CTTTTCGCCATGATGTCTTACTGGGCCACCCACCTCCTCTTTCATGATCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS CCA 90 bp GCACCGTTCGGTTACTCTGTCTCTCCCAGATGCTGTGCATCAGGTTaGTATCCTGGTCGAGCAGCACAATGTAGCAGTCGTTTGCCACAG +
Preference number: 5 (lower is better)
Translates to: APFGYSVSPRCCASG*YPGRAAQCSSRLPQ
Trigger: CTGTGGCAAACGACTGCTACATTGTGCTGCTCGACCAGGATACCAACCTGATGCACAGCATCTGGGAGAGACAGAGTAACCGAACGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS CCA 90 bp GCTTCATCTAGGGTTTGCTTCCCTGGCTTATGGTCTGGATGGGGGTaGGGAAGTTCACCTCCAGATTCACTGTCACTGGCTGAGACAGGA +
Preference number: 5 (lower is better)
Translates to: ASSRVCFPGLWSGWG*GSSPPDSLSLAETG
Trigger: TCCTGTCTCAGCCAGTGACAGTGAATCTGGAGGTGAACTTCCCCACCCCCATCCAGACCATAAGCCAGGGAAGCAAACCCTAGATGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGAGCAGCGGGTCCATGTaGGCAAACTGCACCGAGGCA +
Preference number: 5 (lower is better)
Translates to: PNILYVTEEERAGLIECGSSGSM*ANCTEA
Trigger: TGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCT...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAAATGCTGTGCATCAGGTaGGTATCCTGGTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKMLCIR*VSWSSS
Trigger: GCTGCTCGACCAGGATACCAACCTGATGCACAGCAT...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGTGTTTCACATCCCCGTaGACGTGGTACTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASCFTSP*TWYSRN
Trigger: ATTCCTGGAGTACCACGTCAACGGGGATGTGAAACA...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGGGAAACACAAGCCTGCTTTaGCCATCCTCCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RTAFPCPGSVLLHGVPGGNTSLL*PSSMKA
Trigger: GGCCTTCATGGAGGATGGCAAAAGCAGGCTTGTGTT...TCCCCCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CATCCCTGCTGTGTGGTTTCACCTCTCATGGACTCTGACGGCTGCTGTGCCTTCGCGGGAGCACAGGTATaGTGTGGATGGATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: HPCCVVSPLMDSDGCCAFAGAQV*CGWMFS
Trigger: TGAAAACATCCATCCACACAATACCTGTGCTCCCGC...GAAGGCACAGCAGCCGTCAGAGTCCATGAGAGGTGAAACCACACAGCAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp TTGGCGTTTCTGCCCACCCTGAGGGCAATTCATAGGTTGGTCCTGGCCCTAGTGGCGGGAGCACAGGTATaGTGTGGATGGATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LAFLPTLRAIHRLVLALVAGAQV*CGWMFS
Trigger: TGAAAACATCCATCCACACAATACCTGTGCTCCCGC...CACTAGGGCCAGGACCAACCTATGAATTGCCCTCAGGGTGGGCAGAAACGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCTCCGCACTGCTTTTCCCTGTCCTGGGTCTGTTCTGTTACATGGAGTTCCTGGGAGCCCTACCCTGCCTaGAAATTTGCTCATGAGGGA +
Preference number: 5 (lower is better)
Translates to: PPHCFSLSWVCSVTWSSWEPYPA*KFAHEG
Trigger: TCCCTCATGAGCAAATTTCAAGGCAGGGTAGGGCTC...CCAGGAACTCCATGTAACAGAACAGACCCAGGACAGGGAAAAGCAGTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CTGACTCCTTCCAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACATGCTGTGCATCAGGTaGGTATCCTGGTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LTPSKLVLSGYFPSALEYMLCIR*VSWSSS
Trigger: GCTGCTCGACCAGGATACCAACCTGATGCACAGCAT...GTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTGGAAGGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGCCACCAGTGATCCGGTaGCTTTGGCCTCCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: PNILYVTEEERAGLIECGPPVIR*LWPPKV
Trigger: CACTTTGGGAGGCCAAAGCAACCGGATCACTGGTGG...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGCAATGTAGCAGTCGTTaGCCACAGGCACCAAGTACC +
Preference number: 5 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQQCSSR*PQAPST
Trigger: GGTACTTGGTGCCTGTGGCAAACGACTGCTACATTG...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCAGCGTCACGGCCTCTaGCTGCTGGGGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QSCATIIPQFHHLPKKARQRHGL*LLGSWE
Trigger: CTCCCAGGACCCCAGCAGCAAGAGGCCGTGACGCTG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp AACCACTGCCCAGCCTCCATAGTCTTCTTGACACAGAAACCAAGCCTCATGCAGTGTTTCACATCCCCGTaGACGTGGTACTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: NHCPASIVFLTQKPSLMQCFTSP*TWYSRN
Trigger: ATTCCTGGAGTACCACGTCAACGGGGATGTGAAACA...CTGCATGAGGCTTGGTTTCTGTGTCAAGAAGACTATGGAGGCTGGGCAGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp GTCTGGTGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCTTAATAGTTCTGATATaGGACATCCCTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: VWWPNCTLSRGLTPSKLVLIVLI*DIPAVW
Trigger: CCACACAGCAGGGATGTCCAATATCAGAACTATTAA...GACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCACCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTTCTGTGGATGGACATTaGGGTTGTTGCTACCGTTTG +
Preference number: 5 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSSVDGH*GCCYRL
Trigger: CAAACGGTAGCAACAACCCAAATGTCCATCCACAGA...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp CTTAATTCATCTGTGGATGGACATTTGGGTTGTTGCTACCGTTTGACTTTTGAGCCATCTTGGGGAGGCTaGGGGAAGACAGCCACGCCA +
Preference number: 5 (lower is better)
Translates to: LNSSVDGHLGCCYRLTFEPSWGG*GKTATP
Trigger: TGGCGTGGCTGTCTTCCCCAAGCCTCCCCAAGATGG...CTCAAAAGTCAAACGGTAGCAACAACCCAAATGTCCATCCACAGATGAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGATGGAGGCCATCAGCTaGCGCATGCCCAGCATCCCC +
Preference number: 5 (lower is better)
Translates to: TKLCNHHSTISSSSKESPMEAIS*RMPSIP
Trigger: GGGGATGCTGGGCATGCGCAAGCTGATGGCCTCCAT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CCGACTGTAGTAGATTTGGGAGGGCTGCGGGTTCAGAGTAGGAAAGCAGCCTCGAACCACCAATGTGCTTaGTCTCTGATACACAGATTT +
Preference number: 5 (lower is better)
Translates to: PTVVDLGGLRVQSRKAASNHQCA*SLIHRF
Trigger: AAATCTGTGTATCAGAGACAAAGCACATTGGTGGTT...CGAGGCTGCTTTCCTACTCTGAACCCGCAGCCCTCCCAAATCTACTACAGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp AGTAGAGCTGAGAGGGCAACATCAGCCAAGAGGGGAACCTGGAAGGGGACGAGGAGTATATTCACAAAGTaGTGCAACCATCATTCCACA +
Preference number: 5 (lower is better)
Translates to: SRAERATSAKRGTWKGTRSIFTK*CNHHST
Trigger: TGTGGAATGATGGTTGCACAACTTTGTGAATATACT...CCTCGTCCCCTTCCAGGTTCCCCTCTTGGCTGATGTTGCCCTCTCAGCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGTAATCCTGGCACTTaGGGAGGCCGGGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TKLCNHHSTISSSSKESPCNPGT*GGRGRQ
Trigger: CTGCCTGCCCCGGCCTCCCAAAGTGCCAGGATTACA...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp TGTCCATCCCAACCGTCTCCTTGTCTCAGGGCCTTGGTGCTTCCATCTGTGAAATTAATAGTTCTGATATaGGACATCCCTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: CPSQPSPCLRALVLPSVKLIVLI*DIPAVW
Trigger: CCACACAGCAGGGATGTCCAATATCAGAACTATTAA...TTTCACAGATGGAAGCACCAAGGCCCTGAGACAAGGAGACGGTTGGGATGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS-3UTR CAA 90 bp CCAAATATCCTTTACGTGACAGAAGAGGAGAGGGCTGGCTTGATTGAGTGTGGGTCTGTGGATGGACATTaGGGTTGTTGCTACCGTTTG +
Preference number: 5 (lower is better)
Translates to: PNILYVTEEERAGLIECGSVDGH*GCCYRL
Trigger: CAAACGGTAGCAACAACCCAAATGTCCATCCACAGA...CCCACACTCAATCAAGCCAGCCCTCTCCTCTTCTGTCACGTAAAGGATATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CAAGCTGGTCCTTTCTGGGTACTTTCCTTCAGCCCTAGAGTACCAAATAATTTCAACACAAGCCTGCTTTaGCCATCCTCCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QAGPFWVLSFSPRVPNNFNTSLL*PSSMKA
Trigger: GGCCTTCATGGAGGATGGCAAAAGCAGGCTTGTGTT...GAAATTATTTGGTACTCTAGGGCTGAAGGAAAGTACCCAGAAAGGACCAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp TGGCCAAACTGCACGTTGTCCAGAGGTCTGACTCCTTCCAAGCTGGTCCTTTCTAACCACCAATGTGCTTaGTCTCTGATACACAGATTT +
Preference number: 5 (lower is better)
Translates to: WPNCTLSRGLTPSKLVLSNHQCA*SLIHRF
Trigger: AAATCTGTGTATCAGAGACAAAGCACATTGGTGGTT...AGAAAGGACCAGCTTGGAAGGAGTCAGACCTCTGGACAACGTGCAGTTTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285599.8
CDS-3UTR CAA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTGCATTGAAGAACTGCTaGTCACATCCCCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: QSCATIIPQFHHLPKKARALKNC*SHPQGQ
Trigger: CTGGCCCTGGGGATGTGACAAGCAGTTCTTCAATGC...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp ACAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGAACTGCACCGAGGCATaGAAGAACTGCTTGTCACAT +
Preference number: 5 (lower is better)
Translates to: TKLCNHHSTISSSSKESPNCTEA*KNCLSH
Trigger: ATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTT...CGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp CAAAGTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCAGGGCTCACTGCTGTaGAAAGTGAATAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: QSCATIIPQFHHLPKKARQGSLL*KVNKER
Trigger: ACGTTCTTTATTCACTTTCAACAGCAGTGAGCCCTG...ACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS-3UTR CAA 90 bp GTTGTGCAACCATCATTCCACAATTTCATCATCTTCCAAAGAAAGCCCGTCCCTAGTATATTCACAAAGTaGTGCAACCATCATTCCACA +
Preference number: 5 (lower is better)
Translates to: VVQPSFHNFIIFQRKPVPSIFTK*CNHHST
Trigger: TGTGGAATGATGGTTGCACAACTTTGTGAATATACT...AGGGACGGGCTTTCTTTGGAAGATGATGAAATTGTGGAATGATGGTTGCACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CCA 72 bp CACGAAGGCCCGGATGGGGCCGGCGGACTGGACCCCTaGCGGTCGCAGCAACAGGAGCGGTGCCAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: HEGPDGAGGLDP*RSQQQERCQQR
Trigger: CCGCTGCTGGCACCGCTCCTGTTGCTGCGACCGCCAGGGGTCCAGTCCGCCGGCCCCATCCGGGCCTTCGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp CCAGCGAGGTCTCCGAACAGCACCACGGGCCTGTGCTaGAGCGCCAGTGCGCTCCTCTGGCGCAGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: PARSPNSTTGLC*SASALLWRRAV
Trigger: CACTGCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCTGTTCGGAGACCTCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp GTCCCAGCGAGGTCTCCGAACAGCACCACGGGCCTGTaGTGCAGCGCCAGTGCGCTCCTCTGGCGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: VPARSPNSTTGL*CSASALLWRRA
Trigger: TGCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCTGTTCGGAGACCTCGCTGGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp CCGGCGCTGCTGGCCGCGGGCCAGCTCTTCCACCACTaGGGTGTAGACATTGGCGGCGTACGCCCGCATGCT +
Preference number: 6 (lower is better)
Translates to: PALLAAGQLFHH*GVDIGGVRPHA
Trigger: AGCATGCGGGCGTACGCCGCCAATGTCTACACCTCAGTGGTGGAAGAGCTGGCCCGCGGCCAGCAGCGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp CAACAAGGCGCTGGCTCGCCGGGCCAGCCCCTTCAGTaGGCTGCGGGACGTGTAGAAGCCCGTCCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: QQGAGSPGQPLQ*AAGRVEARPGL
Trigger: CAGGCCTGGACGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCCCGGCGAGCCAGCGCCTTGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp AGGCGCTGGCTCGCCGGGCCAGCCCCTTCAGTGAGCTaGGGGACGTGTAGAAGCCCGTCCAGGCCTGGAATG +
Preference number: 6 (lower is better)
Translates to: RRWLAGPAPSVS*GTCRSPSRPGM
Trigger: CATTCCAGGCCTGGACGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCCCGGCGAGCCAGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp TCCGAACAGCACCACGGGCCTGTGCTGCAGCGCCAGTaGGCTCCTCTGGCGCAGGGCAGTGGTGAGGGACCA +
Preference number: 6 (lower is better)
Translates to: SEQHHGPVLQRQ*APLAQGSGEGP
Trigger: TGGTCCCTCACCACTGCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCACAGGCCCGTGGTGCTGTTCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp GAGGCGACGCCATCCCACCACAGCCGGAAAAACTCCTaGTCCACAGCGATGAACCGGCGCTGCTGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: EATPSHHSRKNS*STAMNRRCWPR
Trigger: CCGCGGCCAGCAGCGCCGGTTCATCGCTGTGGAGCAGGAGTTTTTCCGGCTGTGGTGGGATGGCGTCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp TCCAGGGGGCCGGCTTGGTACTCCTGCTCTATCCGGTaGCAGAGCAGCTCCCCGTCATGGCCCTGCGGCACA +
Preference number: 6 (lower is better)
Translates to: SRGPAWYSCSIR*QSSSPSWPCGT
Trigger: TGTGCCGCAGGGCCATGACGGGGAGCTGCTCTGCCACCGGATAGAGCAGGAGTACCAAGCCGGCCCCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS TCA 72 bp CCCACCACAGCCGGAAAAACTCCTGCTCCACAGCGATaGACCGGCGCTGCTGGCCGCGGGCCAGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: PTTAGKTPAPQR*TGAAGRGPALP
Trigger: TGGAAGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCATCGCTGTGGAGCAGGAGTTTTTCCGGCTGTGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp GCATGGCTGGTGCGTCTCCTCAGCCTGCGGCCAAATTaGAGGGTGCTCGCCACAGTGGCAGCCGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: AWLVRLLSLRPN*RVLATVAAGSW
Trigger: CCAGGAGCCGGCTGCCACTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCACCAGCCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp TGGTGCGTCTCCTCAGCCTGCGGCCAAATTGAAGGGTaGTCGCCACAGTGGCAGCCGGCTCCTGGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: WCVSSACGQIEG*SPQWQPAPGCP
Trigger: AGGGCACCCAGGAGCCGGCTGCCACTGTGGCGAGCACCCTTCAATTTGGCCGCAGGCTGAGGAGACGCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp GCAGGTCCTGCATCGGAGCTGGCCGCCATGGGTGCCTaGGGCTGGAGCTCATCTAGGACGATGGAGGCCATC +
Preference number: 6 (lower is better)
Translates to: AGPASELAAMGA*GWSSSRTMEAI
Trigger: GATGGCCTCCATCGTCCTAGATGAGCTCCAGCCCCAGGCACCCATGGCGGCCAGCTCCGATGCAGGACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp TCCTGCTCTATCCGGTGGCAGAGCAGCTCCCCGTCATaGCCCTGCGGCACATGGGTGAGCCGGGAGCGGATT +
Preference number: 6 (lower is better)
Translates to: SCSIRWQSSSPS*PCGTWVSRERI
Trigger: AATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCATGACGGGGAGCTGCTCTGCCACCGGATAGAGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS TCA 72 bp TCAGGTCGTAGTCGATCCGGGAGCCGAGGTGGGCATTaGAGCCCGCCAGCGCAAATAGGGTGGGCGTCGTGG +
Preference number: 6 (lower is better)
Translates to: SGRSRSGSRGGH*SPPAQIGWASW
Trigger: CCACGACGCCCACCCTATTTGCGCTGGCGGGCTTCAATGCCCACCTCGGCTCCCGGATCGACTACGACCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp CGGAAAAACTCCTGCTCCACAGCGATGAACCGGCGCTaGTGGCCGCGGGCCAGCTCTTCCACCACTGAGGTG +
Preference number: 6 (lower is better)
Translates to: RKNSCSTAMNRR*WPRASSSTTEV
Trigger: CACCTCAGTGGTGGAAGAGCTGGCCCGCGGCCAGCAGCGCCGGTTCATCGCTGTGGAGCAGGAGTTTTTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp CCAGGCCAGCGGGTTGTAGACCGAGGCAAAATGTCCTaGAGGTCCTGCATCGGAGCTGGCCGCCATGGGTGC +
Preference number: 6 (lower is better)
Translates to: PGQRVVDRGKMS*RSCIGAGRHGC
Trigger: GCACCCATGGCGGCCAGCTCCGATGCAGGACCTGCAGGACATTTTGCCTCGGTCTACAACCCGCTGGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp CTTGCGCATGCCCAGCATCCCCGAGGCCAGGTGCGTTaGGTACATGTCTCTCACCTTGGGGGACTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: LAHAQHPRGQVR*VHVSHLGGLSP
Trigger: GGGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp GCTCCGTGTGGTTGGAGCTGTAGCGCCAGCCAGGGATaGTCAGGATCTGCAGGTGAAGATTCGGGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: APCGWSCSASQG*SGSAGEDSGAA
Trigger: CGCTGCCCCCGAATCTTCACCTGCAGATCCTGAGCATCCCTGGCTGGCGCTACAGCTCCAACCACACGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CAA 72 bp GCTTGCGCATGCCCAGCATCCCCGAGGCCAGGTGCGTaGCGTACATGTCTCTCACCTTGGGGGACTCAGTCC +
Preference number: 6 (lower is better)
Translates to: ACACPASPRPGA*RTCLSPWGTQS
Trigger: GGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CAA 90 bp CCCAGCATCCCCGAGGCCAGGTGCGTTGCGTACATGTCTCTCACCTaGGGGGACTCAGTCCCAGTGATGGCATCATGGTGCTGGACCTCG +
Preference number: 6 (lower is better)
Translates to: PSIPEARCVAYMSLT*GDSVPVMASWCWTS
Trigger: CGAGGTCCAGCACCATGATGCCATCACTGGGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp GCTCATCTAGGACGATGGAGGCCATCAGCTTGCGCATaGCCAGCATCCCCGAGGCCAGGTGCGTTGCGTACA +
Preference number: 6 (lower is better)
Translates to: AHLGRWRPSACA*PASPRPGALRT
Trigger: TGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAGCTGATGGCCTCCATCGTCCTAGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp CAATGTAGCAGTCGTTTGCCACAGGCACCAAGTACCTaGCCGCATGGCTGGTGCGTCTCCTCAGCCTGCGGC +
Preference number: 6 (lower is better)
Translates to: QCSSRLPQAPST*PHGWCVSSACG
Trigger: GCCGCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTACATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp CGCGGGCCAGCTCTTCCACCACTGAGGTGTAGACATTaGCGGCGTACGCCCGCATGCTTTCCTGCACAGTGT +
Preference number: 6 (lower is better)
Translates to: RGPALPPLRCRH*RRTPACFPAQC
Trigger: ACACTGTGCAGGAAAGCATGCGGGCGTACGCCGCCAATGTCTACACCTCAGTGGTGGAAGAGCTGGCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp CGTTTGCCACAGGCACCAAGTACCTGCCCGCATGGCTaGTGCGTCTCCTCAGCCTGCGGCCAAATTGAAGGG +
Preference number: 6 (lower is better)
Translates to: RLPQAPSTCPHG*CVSSACGQIEG
Trigger: CCCTTCAATTTGGCCGCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CAA 90 bp AGCGTGGCATACTGCACCGAGACACCGAGCTCGGCAGCATGGCTGTaGATGTGGTCCAGCAGCGGGTCCATGTTGGCAAACTGCACCGAG +
Preference number: 6 (lower is better)
Translates to: SVAYCTETPSSAAWL*MWSSSGSMLANCTE
Trigger: CTCGGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGTATGCCACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS TCA 72 bp CAGCTTCCCACGCAGGCACCGCGGCCTTGCCCGGTGTaGACAGGTAGTTATCGGAAATGGGGCCCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: QLPTQAPRPCPV*TGSYRKWGPVS
Trigger: TGAAACAGGGCCCCATTTCCGATAACTACCTGTTCACACCGGGCAAGGCCGCGGTGCCTGCGTGGGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS GCA 72 bp GTGGGCGTCGTGGCAGAGGCGCCAAACGGGTCAACGTaGCAGGAGAACTGTGGCCGGATCCCAAATGTTTCA +
Preference number: 6 (lower is better)
Translates to: VGVVAEAPNGST*QENCGRIPNVS
Trigger: TGAAACATTTGGGATCCGGCCACAGTTCTCCTGGCACGTTGACCCGTTTGGCGCCTCTGCCACGACGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp ATCAGCTTGCGCATGCCCAGCATCCCCGAGGCCAGGTaGGTTGCGTACATGTCTCTCACCTTGGGGGACTCA +
Preference number: 6 (lower is better)
Translates to: ISLRMPSIPEAR*VAYMSLTLGDS
Trigger: TGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAAGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp ACCGAGACACCGAGCTCGGCAGCATGGCTGTTGATGTaGTCCAGCAGCGGGTCCATGTTGGCAAACTGCACC +
Preference number: 6 (lower is better)
Translates to: TETPSSAAWLLM*SSSGSMLANCT
Trigger: GGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CCA 72 bp GTGGCATACTGCACCGAGACACCGAGCTCGGCAGCATaGCTGTTGATGTGGTCCAGCAGCGGGTCCATGTTG +
Preference number: 6 (lower is better)
Translates to: VAYCTETPSSAA*LLMWSSSGSML
Trigger: CAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGTATGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CCA 72 bp GATTTCCTTTGGGTGGACGGTGATGATGGGGCCTCCTaGTGGCCTCGAGGGAGAGGTGGTGTCACCTCTGTG +
Preference number: 6 (lower is better)
Translates to: DFLWVDGDDGAS*WPRGRGGVTSV
Trigger: CACAGAGGTGACACCACCTCTCCCTCGAGGCCACCAGGAGGCCCCATCATCACCGTCCACCCAAAGGAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000504248.5
CDS CAA 72 bp CCCGAGGCCAGGTGCGTTGCGTACATGTCTCTCACCTaGGGGGACTCAGTCCCAGTGATGGCATCATGGTGC +
Preference number: 6 (lower is better)
Translates to: PEARCVAYMSLT*GDSVPVMASWC
Trigger: GCACCATGATGCCATCACTGGGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp CTGGTCCATGATGTGCGTGAAGATTTCCTGCCGCTCTaGGAGGGATGGGGACCCTCGCCACACGAACTGCAG +
Preference number: 6 (lower is better)
Translates to: LVHDVREDFLPL*EGWGPSPHELQ
Trigger: CTGCAGTTCGTGTGGCGAGGGTCCCCATCCCTCTCAGAGCGGCAGGAAATCTTCACGCACATCATGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp ACTGCACCGAGACACCGAGCTCGGCAGCATGGCTGTTaGTGTGGTCCAGCAGCGGGTCCATGTTGGCAAACT +
Preference number: 6 (lower is better)
Translates to: TAPRHRARQHGC*CGPAAGPCWQT
Trigger: AGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CCA 72 bp GGCCTTTCCGGAGATTCTGAGAGTGCTCCGTGTGGTTaGAGCTGTAGCGCCAGCCAGGGATGCTCAGGATCT +
Preference number: 6 (lower is better)
Translates to: GLSGDSESAPCG*SCSASQGCSGS
Trigger: AGATCCTGAGCATCCCTGGCTGGCGCTACAGCTCCAACCACACGGAGCACTCTCAGAATCTCCGGAAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp CAGCGCCTGCAGCACAGCCTCCAGATTCACTGTCACTaGCTGAGACAGGACTGGGTCCTCGCCCACTTCATA +
Preference number: 6 (lower is better)
Translates to: QRLQHSLQIHCH*LRQDWVLAHFI
Trigger: TATGAAGTGGGCGAGGACCCAGTCCTGTCTCAGCCAGTGACAGTGAATCTGGAGGCTGTGCTGCAGGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000504248.5
CDS CAA 72 bp TACTGCACCGAGACACCGAGCTCGGCAGCATGGCTGTaGATGTGGTCCAGCAGCGGGTCCATGTTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: YCTETPSSAAWL*MWSSSGSMLAN
Trigger: GTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGCTGCCGAGCTCGGTGTCTCGGTGCAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CAA 90 bp ATGTGGTCCAGCAGCGGGTCCATGTTGGCAAACTGCACCGAGGCATaGAAGAACTGCTTGTCACATCCCCAGGGCCAGAGGACGTGCGGT +
Preference number: 6 (lower is better)
Translates to: MWSSSGSMLANCTEA*KNCLSHPQGQRTCG
Trigger: ACCGCACGTCCTCTGGCCCTGGGGATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CAA 90 bp GCATCAGGTTGGTATCCTGGTCGAGCAGCACAATGTAGCAGTCGTTaGCCACAGGCACCAAGTACCTGCCCGCATGGCTGGTGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: ASGWYPGRAAQCSSR*PQAPSTCPHGWCVS
Trigger: GGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTACATTGTGCTGCTCGACCAGGATACCAACCTGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp GCAGCGGGTCCATGTTGGCAAACTGCACCGAGGCATTaGAGAACTGCTTGTCACATCCCCAGGGCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: AAGPCWQTAPRH*RTACHIPRARG
Trigger: TCCTCTGGCCCTGGGGATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS TCA 72 bp CAGAATAAGCAGGTCATACGCAGATGGGGTCTCTGTTaGGTTCTGGATCTGCGAGGGCACTGGGTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: QNKQVIRRWGLC*VLDLRGHWVAR
Trigger: GCGGGCCACCCAGTGCCCTCGCAGATCCAGAACTCAACAGAGACCCCATCTGCGTATGACCTGCTTATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp AGAGCACTGGGTGGACGACTGAGGTGTCGTTCAGCGTaGGGTTGTAGCCCAGGTCCCAGTCGAAGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: RALGGRLRCRSA*GCSPGPSRSCS
Trigger: GGAACAACTTCGACTGGGACCTGGGCTACAACCTCACGCTGAACGACACCTCAGTCGTCCACCCAGTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp GGTATCCTGGTCGAGCAGCACAATGTAGCAGTCGTTTaGCACAGGCACCAAGTACCTGCCCGCATGGCTGGT +
Preference number: 6 (lower is better)
Translates to: GILVEQHNVAVV*HRHQVPARMAG
Trigger: ACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTACATTGTGCTGCTCGACCAGGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp TCGGAAATGGGGCCCTGTTTCACATCCCCGTTGACGTaGTACTCCAGGAATTCCTGGGTCACGCGCACCGTT +
Preference number: 6 (lower is better)
Translates to: SEMGPCFTSPLT*YSRNSWVTRTV
Trigger: AACGGTGCGCGTGACCCAGGAATTCCTGGAGTACCACGTCAACGGGGATGTGAAACAGGGCCCCATTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS CCA 72 bp GGGGGTGGGGAAGTTCACCTCCAGATTCACTGTCACTaGCTGAGACAGGACTGGGTCCTCGCCCACTTCATA +
Preference number: 6 (lower is better)
Translates to: GGGEVHLQIHCH*LRQDWVLAHFI
Trigger: TATGAAGTGGGCGAGGACCCAGTCCTGTCTCAGCCAGTGACAGTGAATCTGGAGGTGAACTTCCCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS CCA 72 bp ATGGAAGAACAGGTGCTCTGTGGGCCCCAGGGTCTGTaGGTCTCTCTCCCAGCTCTGAACTTAGCTCCCAAC +
Preference number: 6 (lower is better)
Translates to: MEEQVLCGPQGL*VSLPALNLAPN
Trigger: GTTGGGAGCTAAGTTCAGAGCTGGGAGAGAGACCCACAGACCCTGGGGCCCACAGAGCACCTGTTCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504960.1
CDS CCA 72 bp TTCGTCTGCTCTGATCATGGAAGAACAGGTGCTCTGTaGGCCCCAGGGTCTGTGGGTCTCTCTCCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: FVCSDHGRTGAL*APGSVGLSPSS
Trigger: AGAGCTGGGAGAGAGACCCACAGACCCTGGGGCCCACAGAGCACCTGTTCTTCCATGATCAGAGCAGACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504960.1
CDS CAA 72 bp AGCAGCGGGTCCATGTTGGCAAACTGCACCGAGGCATaGAAGAACTGCTTGTCACATCCCCAGGGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SSGSMLANCTEA*KNCLSHPQGQR
Trigger: CCTCTGGCCCTGGGGATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS CAA 72 bp TGGTATCCTGGTCGAGCAGCACAATGTAGCAGTCGTTaGCCACAGGCACCAAGTACCTGCCCGCATGGCTGG +
Preference number: 6 (lower is better)
Translates to: WYPGRAAQCSSR*PQAPSTCPHGW
Trigger: CCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTACATTGTGCTGCTCGACCAGGATACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp CTCTCTCCCAGCTCTGAACTTAGCTCCCAACCAACGTaGCACAGCACACGCAAACGCAGCCAGCATGCAGAC +
Preference number: 6 (lower is better)
Translates to: LSPSSELSSQPT*HSTRKRSQHAD
Trigger: GTCTGCATGCTGGCTGCGTTTGCGTGTGCTGTGTCACGTTGGTTGGGAGCTAAGTTCAGAGCTGGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504960.1
CDS GCA 72 bp TCCATGTTGGCAAACTGCACCGAGGCATTGAAGAACTaGTTGTCACATCCCCAGGGCCAGAGGACGTGCGGT +
Preference number: 6 (lower is better)
Translates to: SMLANCTEALKN*LSHPQGQRTCG
Trigger: ACCGCACGTCCTCTGGCCCTGGGGATGTGACAAGCAGTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS GCA 72 bp ATGGCCCTGCGGCACATGGGTGAGCCGGGAGCGGATTaGATACGTGTAATTCTGTGCTGTCATGTTCGTCTG +
Preference number: 6 (lower is better)
Translates to: MALRHMGEPGAD*IRVILCCHVRL
Trigger: CAGACGAACATGACAGCACAGAATTACACGTATGCAATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504960.1
CDS CCA 72 bp TCATCAAGGTGCGTCACAGCCTCGTCATGCATGACCTaGCCTCCGATGACAAATTCCAGGCGTCCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSRCVTASSCMT*PPMTNSRRPSS
Trigger: GGAGGAAGGACGCCTGGAATTTGTCATCGGAGGCCAGGTCATGCATGACGAGGCTGTGACGCACCTTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp TTCACATCCCCGTTGACGTGGTACTCCAGGAATTCCTaGGTCACGCGCACCGTTCGGTTACTCTGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: FTSPLTWYSRNS*VTRTVRLLCLS
Trigger: GGAGAGACAGAGTAACCGAACGGTGCGCGTGACCCAGGAATTCCTGGAGTACCACGTCAACGGGGATGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS CAA 90 bp GGCCCATACCAGCGTCCATTTGGGAGGAAGCCCTCGTGGATCTCTTaGCCAAGGCAGTTTCTTGGGGCTTCATCTAGGGTTTGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: GPYQRPFGRKPSWIS*PRQFLGASSRVCFP
Trigger: AGGGAAGCAAACCCTAGATGAAGCCCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCTGGTATGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS TCA 72 bp AGTTATCGGAAATGGGGCCCTGTTTCACATCCCCGTTaGCGTGGTACTCCAGGAATTCCTGGGTCACGCGCA +
Preference number: 6 (lower is better)
Translates to: SYRKWGPVSHPR*RGTPGIPGSRA
Trigger: TGCGCGTGACCCAGGAATTCCTGGAGTACCACGTCAACGGGGATGTGAAACAGGGCCCCATTTCCGATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS TCA 72 bp CCGACAGCAACACAAGCCTGCTTTTGCCATCCTCCATaGAGGCCGACTGAACCATGGGGTAGTAATTCCGGG +
Preference number: 6 (lower is better)
Translates to: PTATQACFCHPP*RPTEPWGSNSG
Trigger: CCCGGAATTACTACCCCATGGTTCAGTCGGCCTTCATGGAGGATGGCAAAAGCAGGCTTGTGTTGCTGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS TCA 72 bp GTGGGGAAGTTCACCTCCAGATTCACTGTCACTGGCTaGGACAGGACTGGGTCCTCGCCCACTTCATATAGG +
Preference number: 6 (lower is better)
Translates to: VGKFTSRFTVTG*DRTGSSPTSYR
Trigger: CCTATATGAAGTGGGCGAGGACCCAGTCCTGTCTCAGCCAGTGACAGTGAATCTGGAGGTGAACTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS GCA 72 bp AGGATCTGGTCATCAAGGTGCGTCACAGCCTCGTCATaGATGACCTGGCCTCCGATGACAAATTCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: RIWSSRCVTASS*MTWPPMTNSRR
Trigger: ACGCCTGGAATTTGTCATCGGAGGCCAGGTCATGCATGACGAGGCTGTGACGCACCTTGATGACCAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp ATGGCCCTGCGGCACATGGGTGAGCCGGGAGCGGATTaGATACGTGTAATTCTGTGCTGTCATGTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: MALRHMGEPGAD*IRVILCCHVPV
Trigger: TACAGGAACATGACAGCACAGAATTACACGTATGCAATCCGCTCCCGGCTCACCCATGTGCCGCAGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CCA 72 bp AGAGGCGCCAAACGGGTCAACGTGCCAGGAGAACTGTaGCCGGATCCCAAATGTTTCATAGAGAAACCCGTG +
Preference number: 6 (lower is better)
Translates to: RGAKRVNVPGEL*PDPKCFIEKPV
Trigger: CACGGGTTTCTCTATGAAACATTTGGGATCCGGCCACAGTTCTCCTGGCACGTTGACCCGTTTGGCGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS CAA 72 bp GCATGGCTGTTGATGTGGTCCAGCAGCGGGTCCATGTaGGCAAACTGCACCGAGGCATTGAAGAACTGCTTG +
Preference number: 6 (lower is better)
Translates to: AWLLMWSSSGSM*ANCTEALKNCL
Trigger: CAAGCAGTTCTTCAATGCCTCGGTGCAGTTTGCCAACATGGACCCGCTGCTGGACCACATCAACAGCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285599.8
ENST00000505907.1
CDS TCA 72 bp TCCGCTGCATCTGGTAGCCGTTGTTGTCTGAGTAGATaGCCTGCTGGCTGTTTAGGTTGGTGCTGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SAASGSRCCLSR*PAGCLGWCWSS
Trigger: TGAGGACCAGCACCAACCTAAACAGCCAGCAGGTCATCTACTCAGACAACAACGGCTACCAGATGCAGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS CAA 72 bp CAGCGTCCATTTGGGAGGAAGCCCTCGTGGATCTCTTaGCCAAGGCAGTTTCTTGGGGCTTCATCTAGGGTT +
Preference number: 6 (lower is better)
Translates to: QRPFGRKPSWIS*PRQFLGASSRV
Trigger: AACCCTAGATGAAGCCCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS GCA 72 bp GGTGAGCCGGGAGCGGATTGCATACGTGTAATTCTGTaGTGTCATGTTCCTGTAGAAGTACTGCCGGATCTC +
Preference number: 6 (lower is better)
Translates to: GEPGADCIRVIL*CHVPVEVLPDL
Trigger: GAGATCCGGCAGTACTTCTACAGGAACATGACAGCACAGAATTACACGTATGCAATCCGCTCCCGGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1
CDS GCA 72 bp AGCGTCCATTTGGGAGGAAGCCCTCGTGGATCTCTTTaGCAAGGCAGTTTCTTGGGGCTTCATCTAGGGTTT +
Preference number: 6 (lower is better)
Translates to: SVHLGGSPRGSL*QGSFLGLHLGF
Trigger: AAACCCTAGATGAAGCCCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATGGACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS CCA 72 bp GGTTACTCTGTCTCTCCCAGATGCTGTGCATCAGGTTaGTATCCTGGTCGAGCAGCACAATGTAGCAGTCGT +
Preference number: 6 (lower is better)
Translates to: GYSVSPRCCASG*YPGRAAQCSSR
Trigger: ACGACTGCTACATTGTGCTGCTCGACCAGGATACCAACCTGATGCACAGCATCTGGGAGAGACAGAGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000504960.1
ENST00000505907.1
CDS CAA 72 bp GGAAGCCCTCGTGGATCTCTTTGCCAAGGCAGTTTCTaGGGGCTTCATCTAGGGTTTGCTTCCCTGGCTTAT +
Preference number: 6 (lower is better)
Translates to: GSPRGSLCQGSF*GLHLGFASLAY
Trigger: ATAAGCCAGGGAAGCAAACCCTAGATGAAGCCCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS CAA 90 bp CATTTGGGAGGAAGCCCTCGTGGATCTCTTTGCCAAGGCAGTTTCTaGGGGCTTCATCTAGGGTTTGCTTCCCTGGCTTATGGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: HLGGSPRGSLCQGSF*GLHLGFASLAYGLD
Trigger: ATCCAGACCATAAGCCAGGGAAGCAAACCCTAGATGAAGCCCCAAGAAACTGCCTTGGCAAAGAGATCCACGAGGGCTTCCTCCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505907.1
CDS GCA 72 bp ACCAACGTGACACAGCACACGCAAACGCAGCCAGCATaGAGACACCAGAGCAATTCATTTCTTCATCAGACC +
Preference number: 6 (lower is better)
Translates to: TNVTQHTQTQPA*RHQSNSFLHQT
Trigger: GGTCTGATGAAGAAATGAATTGCTCTGGTGTCTGCATGCTGGCTGCGTTTGCGTGTGCTGTGTCACGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504960.1
CDS CCA 72 bp AGTGGGTCTGATGTTGTAGTGCCGGTAACTGAGGCCTaGGATTGTGGTCAGAATAAGCAGGTCATACGCAGA +
Preference number: 6 (lower is better)
Translates to: SGSDVVVPVTEA*DCGQNKQVIRR
Trigger: TCTGCGTATGACCTGCTTATTCTGACCACAATCCCAGGCCTCAGTTACCGGCACTACAACATCAGACCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285599.8
ENST00000504248.5
ENST00000505907.1