Pregenerated sensors for MAMDC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000165072, ENSG00000278608Ensembl transcript IDs: ENST00000377182.5, ENST00000460688.1, ENST00000617216.1, ENST00000619405.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGACACTTGGAAGGGGCAGGCCTTCCAGGAGTCCCTCCGCTGGGTTaGGACCCGAGGCTCCCGCCCCGCCCAGCCGCGGTGGGAACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RHLEGAGLPGVPPLG*DPRLPPRPAAVGTR Trigger: GCGAGTTCCCACCGCGGCTGGGCGGGGCGGGAGCCTCGGGTCCCAACCCAGCGGAGGGACTCCTGGAAGGCCTGCCCCTTCCAAGTGTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 90 bp | CGCCCCGGCGCTGAGCAGCAGCCTCAGGTCAGACCGCGGCCCAGCTaGTCCTGGGCGACGATGGGGCTGGACAGGGAGGAGACAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPGAEQQPQVRPRPS*SWATMGLDREETTA Trigger: TGCAGTTGTCTCCTCCCTGTCCAGCCCCATCGTCGCCCAGGACCAGCTGGGCCGCGGTCTGACCTGAGGCTGCTGCTCAGCGCCGGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | CTTGCAGACACTTGGAAGGGGCAGGCCTTCCAGGAGTCCCTCCGCTaGGTTGGGACCCGAGGCTCCCGCCCCGCCCAGCCGCGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LADTWKGQAFQESLR*VGTRGSRPAQPRWE Trigger: TTCCCACCGCGGCTGGGCGGGGCGGGAGCCTCGGGTCCCAACCCAGCGGAGGGACTCCTGGAAGGCCTGCCCCTTCCAAGTGTCTGCAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS GCA 90 bp | CAACTTTGCAGAGCGGCTCCCGGAGCCGAGCGGTATGCTGGAAGGTaGTCGAATGGAGAGCGCCAGCGCCCCGGCGCTGAGCAGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLCRAAPGAERYAGR*SNGERQRPGAEQQP Trigger: AGGCTGCTGCTCAGCGCCGGGGCGCTGGCGCTCTCCATTCGAGCACCTTCCAGCATACCGCTCGGCTCCGGGAGCCGCTCTGCAAAGTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | GGGAGGATGACTAGGAAGGGGTGCAAGTTGCCAGCCCGCTGGGACTaGCTGCTCCTAGTGAAAGGGATCGTGGGAGGCGGGGGCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRMTRKGCKLPARWD*LLLVKGIVGGGGAG Trigger: CCCGGCGCCCCCGCCTCCCACGATCCCTTTCACTAGGAGCAGCCAGTCCCAGCGGGCTGGCAACTTGCACCCCTTCCTAGTCATCCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | CGAGGCTCCCGCCCCGCCCAGCCGCGGTGGGAACTCGCTTATTTCTaGGGACAGCTTCCCTGCATCTGGCATGTCAGTCCCGCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGSRPAQPRWELAYF*GQLPCIWHVSPAGL Trigger: CAGCCCTGCGGGACTGACATGCCAGATGCAGGGAAGCTGTCCCCAGAAATAAGCGAGTTCCCACCGCGGCTGGGCGGGGCGGGAGCCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 90 bp | CTCAGGTCAGACCGCGGCCCAGCTGGTCCTGGGCGACGATGGGGCTaGACAGGGAGGAGACAACTGCACACTTTGAAAGGCCAGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: LRSDRGPAGPGRRWG*TGRRQLHTLKGQPR Trigger: TCGTGGCTGGCCTTTCAAAGTGTGCAGTTGTCTCCTCCCTGTCCAGCCCCATCGTCGCCCAGGACCAGCTGGGCCGCGGTCTGACCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS TCA 90 bp | GCCAGGAGGACGCCCCTTAACAGCATGGTCGCGTTTCAGGGAGGATaGCTAGGAAGGGGTGCAAGTTGCCAGCCCGCTGGGACTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRTPLNSMVAFQGG*LGRGASCQPAGTGC Trigger: GCAGCCAGTCCCAGCGGGCTGGCAACTTGCACCCCTTCCTAGTCATCCTCCCTGAAACGCGACCATGCTGTTAAGGGGCGTCCTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | GTTTCAGGGAGGATGACTAGGAAGGGGTGCAAGTTGCCAGCCCGCTaGGACTGGCTGCTCCTAGTGAAAGGGATCGTGGGAGGCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSGRMTRKGCKLPAR*DWLLLVKGIVGGGG Trigger: GCCCCCGCCTCCCACGATCCCTTTCACTAGGAGCAGCCAGTCCCAGCGGGCTGGCAACTTGCACCCCTTCCTAGTCATCCTCCCTGAAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | TCGCTCAGGATTTTAAAGCTTGGGACCAGAGCCCTTGCAGACACTTaGAAGGGGCAGGCCTTCCAGGAGTCCCTCCGCTGGGTTGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SLRILKLGTRALADT*KGQAFQESLRWVGT Trigger: GGTCCCAACCCAGCGGAGGGACTCCTGGAAGGCCTGCCCCTTCCAAGTGTCTGCAAGGGCTCTGGTCCCAAGCTTTAAAATCCTGAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 90 bp | GAGGAGAGGTCGGCCCGCAGTGCCTTCGCTCAGGATTTTAAAGCTTaGGACCAGAGCCCTTGCAGACACTTGGAAGGGGCAGGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EERSARSAFAQDFKA*DQSPCRHLEGAGLP Trigger: TGGAAGGCCTGCCCCTTCCAAGTGTCTGCAAGGGCTCTGGTCCCAAGCTTTAAAATCCTGAGCGAAGGCACTGCGGGCCGACCTCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS GCA 90 bp | GCCCAGCCGCGGTGGGAACTCGCTTATTTCTGGGGACAGCTTCCCTaGATCTGGCATGTCAGTCCCGCAGGGCTGGCCCTAATTTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: AQPRWELAYFWGQLP*IWHVSPAGLALILT Trigger: AGTTAAAATTAGGGCCAGCCCTGCGGGACTGACATGCCAGATGCAGGGAAGCTGTCCCCAGAAATAAGCGAGTTCCCACCGCGGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 90 bp | AGGGAGGAGACAACTGCACACTTTGAAAGGCCAGCCACGACTGGCTaGGAGAGGAGAGGTCGGCCCGCAGTGCCTTCGCTCAGGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: REETTAHFERPATTG*ERRGRPAVPSLRIL Trigger: TAAAATCCTGAGCGAAGGCACTGCGGGCCGACCTCTCCTCTCCCAGCCAGTCGTGGCTGGCCTTTCAAAGTGTGCAGTTGTCTCCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS GCA 90 bp | GAACTCGACCTCCGCAAGGTTCCAGGCAGCATTCCCTGGCCTGTCTaGTTTCCAGATTTCCTCGTAAAGGCCAGCCACATCCCGAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELDLRKVPGSIPWPV*FPDFLVKASHIPSV Trigger: TACACTCGGGATGTGGCTGGCCTTTACGAGGAAATCTGGAAAGCAGACAGGCCAGGGAATGCTGCCTGGAACCTTGCGGAGGTCGAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | CCGCGGTGGGAACTCGCTTATTTCTGGGGACAGCTTCCCTGCATCTaGCATGTCAGTCCCGCAGGGCTGGCCCTAATTTTAACTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRWELAYFWGQLPCI*HVSPAGLALILTSS Trigger: AGAAGAAGTTAAAATTAGGGCCAGCCCTGCGGGACTGACATGCCAGATGCAGGGAAGCTGTCCCCAGAAATAAGCGAGTTCCCACCGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS TCA 90 bp | CGGGGAGATGAGCTGTGCCACCTCCTGGAAGTGCTTCACATAAACTaGGTCCACGTACATGTAGTGGCCCAGTTCACTCTTGAAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGDELCHLLEVLHIN*VHVHVVAQFTLEGV Trigger: CACACCTTCAAGAGTGAACTGGGCCACTACATGTACGTGGACTCAGTTTATGTGAAGCACTTCCAGGAGGTGGCACAGCTCATCTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | TGTAGAGGTTCAGCTGGCTGGGATCTGACAGAGACTCCGAAGATGTaGTTATCTGGTAGACCAAACGGAGGCAGCTCCATTCCTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CRGSAGWDLTETPKM*LSGRPNGGSSIPQP Trigger: AGGCTGAGGAATGGAGCTGCCTCCGTTTGGTCTACCAGATAACCACATCTTCGGAGTCTCTGTCAGATCCCAGCCAGCTGAACCTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS TCA 90 bp | GTTTCTCCCCTCCTCCTGTGCCAGCTGCTCCGGTTTCTTTTCTCCTaGGTAAATGTACATTCATCTTGCTCGAAAGTACACTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSPLLLCQLLRFLFS*VNVHSSCSKVHSPG Trigger: ACCTGGAGAGTGTACTTTCGAGCAAGATGAATGTACATTTACTCAGGAGAAAAGAAACCGGAGCAGCTGGCACAGGAGGAGGGGAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000377182.5 ENST00000460688.1 ENST00000617216.1 ENST00000619405.1 |
||
| CDS GCA 90 bp | GTTGCCTCTCACAGCTGTATTCAATCAGTGCTCGTAGCCAGGAAATaGTCTGTTCACCTCTTCTCCTCCATAAGAGGGACTCTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VASHSCIQSVLVARK*SVHLFSSIRGTLHC Trigger: ACAGTGAAGAGTCCCTCTTATGGAGGAGAAGAGGTGAACAGAGCATTTCCTGGCTACGAGCACTGATTGAATACAGCTGTGAGAGGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377182.5 |
||
| CDS CCA 90 bp | CACGTACATGTAGTGGCCCAGTTCACTCTTGAAGGTGTGATCCTGTaGGAGAATGGAGTGGACATTCCGAATACTTCCTCCTCCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: HVHVVAQFTLEGVIL*ENGVDIPNTSSSNK Trigger: TTTGTTGGAGGAGGAAGTATTCGGAATGTCCACTCCATTCTCCCACAGGATCACACCTTCAAGAGTGAACTGGGCCACTACATGTACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS GCA 90 bp | CAGCCTGTAAGTCAGGACTTAGCAGCACAGCTTTCTCCCCCTGCTTaGCAAAGGAGGTATCCACATAAATGTAATGGCCTTCCTCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: QPVSQDLAAQLSPPA*QRRYPHKCNGLPHL Trigger: TAAATGAGGAAGGCCATTACATTTATGTGGATACCTCCTTTGGCAAGCAGGGGGAGAAAGCTGTGCTGCTAAGTCCTGACTTACAGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | CATGGGCTTCTTAAAGGTGATTTCAGCTTGCATCCAAACACCCCTTaGGGACTCCAACACAGACCAGATCTTCTCTTGAACCACATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HGLLKGDFSLHPNTP*GLQHRPDLLLNHMV Trigger: AACCATGTGGTTCAAGAGAAGATCTGGTCTGTGTTGGAGTCCCCAAGGGGTGTTTGGATGCAAGCTGAAATCACCTTTAAGAAGCCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | GATCAAAGCTTTCATCTTCAAATCTCATGTAGAGGTTCAGCTGGCTaGGATCTGACAGAGACTCCGAAGATGTGGTTATCTGGTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: DQSFHLQISCRGSAG*DLTETPKMWLSGRP Trigger: TGGTCTACCAGATAACCACATCTTCGGAGTCTCTGTCAGATCCCAGCCAGCTGAACCTCTACATGAGATTTGAAGATGAAAGCTTTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 90 bp | AGTGGACATTCCGAATACTTCCTCCTCCAACAAACCAGTTCACATTaGGATTCCAGCGGTTCACAAAGCCACAGAGATGATTTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SGHSEYFLLQQTSSH*DSSGSQSHRDDFLQ Trigger: TTGAAGAAAATCATCTCTGTGGCTTTGTGAACCGCTGGAATCCCAATGTGAACTGGTTTGTTGGAGGAGGAAGTATTCGGAATGTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS TCA 90 bp | GATTTTCTTCAAAGTCACATTCAATACAGTAGCCGGTTGTCATCTTaGTTTCAAATAGTGCGATGCTGGCTGTGTTTCCCTGTCCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DFLQSHIQYSSRLSS*FQIVRCWLCFPVLV Trigger: TACTAGGACAGGGAAACACAGCCAGCATCGCACTATTTGAAATCAAGATGACAACCGGCTACTGTATTGAATGTGACTTTGAAGAAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | ACTTGGAAGGGGCAGGCCTTCCAGGAGTCCCTCCGCTaGGTTGGGACCCGAGGCTCCCGCCCCGCCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TWKGQAFQESLR*VGTRGSRPAQP Trigger: CGGCTGGGCGGGGCGGGAGCCTCGGGTCCCAACCCAGCGGAGGGACTCCTGGAAGGCCTGCCCCTTCCAAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 72 bp | GTTGGGACCCGAGGCTCCCGCCCCGCCCAGCCGCGGTaGGAACTCGCTTATTTCTGGGGACAGCTTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VGTRGSRPAQPR*ELAYFWGQLPC Trigger: GCAGGGAAGCTGTCCCCAGAAATAAGCGAGTTCCCACCGCGGCTGGGCGGGGCGGGAGCCTCGGGTCCCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 72 bp | CAGCAGCCTCAGGTCAGACCGCGGCCCAGCTGGTCCTaGGCGACGATGGGGCTGGACAGGGAGGAGACAACT | + |
|
Preference number: 6 (lower is better) Translates to: QQPQVRPRPSWS*ATMGLDREETT Trigger: AGTTGTCTCCTCCCTGTCCAGCCCCATCGTCGCCCAGGACCAGCTGGGCCGCGGTCTGACCTGAGGCTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | ACTTTGCAGAGCGGCTCCCGGAGCCGAGCGGTATGCTaGAAGGTGCTCGAATGGAGAGCGCCAGCGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TLQSGSRSRAVC*KVLEWRAPAPR Trigger: CCGGGGCGCTGGCGCTCTCCATTCGAGCACCTTCCAGCATACCGCTCGGCTCCGGGAGCCGCTCTGCAAAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | GACCGCGGCCCAGCTGGTCCTGGGCGACGATGGGGCTaGACAGGGAGGAGACAACTGCACACTTTGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DRGPAGPGRRWG*TGRRQLHTLKG Trigger: GCCTTTCAAAGTGTGCAGTTGTCTCCTCCCTGTCCAGCCCCATCGTCGCCCAGGACCAGCTGGGCCGCGGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | CGCCCCGCCCAGCCGCGGTGGGAACTCGCTTATTTCTaGGGACAGCTTCCCTGCATCTGGCATGTCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPAQPRWELAYF*GQLPCIWHVSP Trigger: GGGACTGACATGCCAGATGCAGGGAAGCTGTCCCCAGAAATAAGCGAGTTCCCACCGCGGCTGGGCGGGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 72 bp | ACTAGGAAGGGGTGCAAGTTGCCAGCCCGCTGGGACTaGCTGCTCCTAGTGAAAGGGATCGTGGGAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TRKGCKLPARWD*LLLVKGIVGGG Trigger: CCCGCCTCCCACGATCCCTTTCACTAGGAGCAGCCAGTCCCAGCGGGCTGGCAACTTGCACCCCTTCCTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CAA 90 bp | AGGGAGAAGTCGAGAGGCAAAGCTTGCGCTCTGAGCTGCCCAACTTaGCAGAGCGGCTCCCGGAGCCGAGCGGTATGCTGGAAGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: REKSRGKACALSCPT*QSGSRSRAVCWKVL Trigger: GAGCACCTTCCAGCATACCGCTCGGCTCCGGGAGCCGCTCTGCAAAGTTGGGCAGCTCAGAGCGCAAGCTTTGCCTCTCGACTTCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS GCA 72 bp | GGGGACCCAAGGAGGGAGAAGTCGAGAGGCAAAGCTTaGGCTCTGAGCTGCCCAACTTTGCAGAGCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GDPRREKSRGKA*ALSCPTLQSGS Trigger: GGAGCCGCTCTGCAAAGTTGGGCAGCTCAGAGCGCAAGCTTTGCCTCTCGACTTCTCCCTCCTTGGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | ACAACTGCACACTTTGAAAGGCCAGCCACGACTGGCTaGGAGAGGAGAGGTCGGCCCGCAGTGCCTTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TTAHFERPATTG*ERRGRPAVPSL Trigger: GAGCGAAGGCACTGCGGGCCGACCTCTCCTCTCCCAGCCAGTCGTGGCTGGCCTTTCAAAGTGTGCAGTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CAA 72 bp | CGGGGACCCAAGGAGGGAGAAGTCGAGAGGCAAAGCTaGCGCTCTGAGCTGCCCAACTTTGCAGAGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGPKEGEVERQS*RSELPNFAERL Trigger: GAGCCGCTCTGCAAAGTTGGGCAGCTCAGAGCGCAAGCTTTGCCTCTCGACTTCTCCCTCCTTGGGTCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS TCA 72 bp | ACGCCCCTTAACAGCATGGTCGCGTTTCAGGGAGGATaGCTAGGAAGGGGTGCAAGTTGCCAGCCCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPLNSMVAFQGG*LGRGASCQPAG Trigger: CCCAGCGGGCTGGCAACTTGCACCCCTTCCTAGTCATCCTCCCTGAAACGCGACCATGCTGTTAAGGGGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS GCA 72 bp | CGGTGGGAACTCGCTTATTTCTGGGGACAGCTTCCCTaGATCTGGCATGTCAGTCCCGCAGGGCTGGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: RWELAYFWGQLP*IWHVSPAGLAL Trigger: TAGGGCCAGCCCTGCGGGACTGACATGCCAGATGCAGGGAAGCTGTCCCCAGAAATAAGCGAGTTCCCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 72 bp | AGGATGACTAGGAAGGGGTGCAAGTTGCCAGCCCGCTaGGACTGGCTGCTCCTAGTGAAAGGGATCGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RMTRKGCKLPAR*DWLLLVKGIVG Trigger: TCCCACGATCCCTTTCACTAGGAGCAGCCAGTCCCAGCGGGCTGGCAACTTGCACCCCTTCCTAGTCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CAA 90 bp | TTCGCTCAGGATTTTAAAGCTTGGGACCAGAGCCCTTGCAGACACTaGGAAGGGGCAGGCCTTCCAGGAGTCCCTCCGCTGGGTTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FAQDFKAWDQSPCRH*EGAGLPGVPPLGWD Trigger: GTCCCAACCCAGCGGAGGGACTCCTGGAAGGCCTGCCCCTTCCAAGTGTCTGCAAGGGCTCTGGTCCCAAGCTTTAAAATCCTGAGCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 72 bp | TCGGCCCGCAGTGCCTTCGCTCAGGATTTTAAAGCTTaGGACCAGAGCCCTTGCAGACACTTGGAAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SARSAFAQDFKA*DQSPCRHLEGA Trigger: TGCCCCTTCCAAGTGTCTGCAAGGGCTCTGGTCCCAAGCTTTAAAATCCTGAGCGAAGGCACTGCGGGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CAA 72 bp | GATTTTAAAGCTTGGGACCAGAGCCCTTGCAGACACTaGGAAGGGGCAGGCCTTCCAGGAGTCCCTCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DFKAWDQSPCRH*EGAGLPGVPPL Trigger: CAGCGGAGGGACTCCTGGAAGGCCTGCCCCTTCCAAGTGTCTGCAAGGGCTCTGGTCCCAAGCTTTAAAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS GCA 72 bp | CTCCGCAAGGTTCCAGGCAGCATTCCCTGGCCTGTCTaGTTTCCAGATTTCCTCGTAAAGGCCAGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: LRKVPGSIPWPV*FPDFLVKASHI Trigger: GATGTGGCTGGCCTTTACGAGGAAATCTGGAAAGCAGACAGGCCAGGGAATGCTGCCTGGAACCTTGCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | GAACTCGCTTATTTCTGGGGACAGCTTCCCTGCATCTaGCATGTCAGTCCCGCAGGGCTGGCCCTAATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ELAYFWGQLPCI*HVSPAGLALIL Trigger: TAAAATTAGGGCCAGCCCTGCGGGACTGACATGCCAGATGCAGGGAAGCTGTCCCCAGAAATAAGCGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617216.1 |
||
| CDS CCA 72 bp | TCAGCTGGCTGGGATCTGACAGAGACTCCGAAGATGTaGTTATCTGGTAGACCAAACGGAGGCAGCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SAGWDLTETPKM*LSGRPNGGSSI Trigger: AATGGAGCTGCCTCCGTTTGGTCTACCAGATAACCACATCTTCGGAGTCTCTGTCAGATCCCAGCCAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | CATGTAGTAGCCTACCCCAGTAGTGTGATCTCCCTTTaGTCCTGTGTAGGAAGTGGGAGTTTCTCCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HVVAYPSSVISL*SCVGSGSFSPP Trigger: AGGAGGGGAGAAACTCCCACTTCCTACACAGGACCAAAGGGAGATCACACTACTGGGGTAGGCTACTACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377182.5 |
||
| CDS CAA 72 bp | GACTCCTCGCAGAGGCCTGGACAAGAGGCGTGCTTTTaGTCCATACACCATATGGGAGGCCTCAATGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: DSSQRPGQEACF*SIHHMGGLNVH Trigger: ATGTACATTGAGGCCTCCCATATGGTGTATGGACAAAAAGCACGCCTCTTGTCCAGGCCTCTGCGAGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377182.5 |
||
| CDS TCA 72 bp | GAGCTGTGCCACCTCCTGGAAGTGCTTCACATAAACTaGGTCCACGTACATGTAGTGGCCCAGTTCACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ELCHLLEVLHIN*VHVHVVAQFTL Trigger: AAGAGTGAACTGGGCCACTACATGTACGTGGACTCAGTTTATGTGAAGCACTTCCAGGAGGTGGCACAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | GTAGTGGCCCAGTTCACTCTTGAAGGTGTGATCCTGTaGGAGAATGGAGTGGACATTCCGAATACTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VVAQFTLEGVIL*ENGVDIPNTSS Trigger: GGAGGAAGTATTCGGAATGTCCACTCCATTCTCCCACAGGATCACACCTTCAAGAGTGAACTGGGCCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | TCAAGCAGTGTTTTCCAGAGACTCCTCGCAGAGGCCTaGACAAGAGGCGTGCTTTTTGTCCATACACCATAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSVFQRLLAEA*TRGVLFVHTPY Trigger: ATATGGTGTATGGACAAAAAGCACGCCTCTTGTCCAGGCCTCTGCGAGGAGTCTCTGGAAAACACTGCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377182.5 |
||
| CDS CAA 72 bp | TCATCCAGGGCTACAAGCCCACAGTCCCAGAAACTTTaGCATAGGCTCATGAAAACCACCTTGGTAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSRATSPQSQKL*HRLMKTTLVGM Trigger: CATGCCTACCAAGGTGGTTTTCATGAGCCTATGCAAAAGTTTCTGGGACTGTGGGCTTGTAGCCCTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS TCA 72 bp | GATCTTGCTCAAAATTGCAGCTGGCTTCCACGGCACTaGACAGAAGTTCTGTCTGATTCTGGCAGTGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: DLAQNCSWLPRH*TEVLSDSGSEQ Trigger: CTGTTCACTGCCAGAATCAGACAGAACTTCTGTTCAGTGCCGTGGAAGCCAGCTGCAATTTTGAGCAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS GCA 72 bp | AGTCAGGACTTAGCAGCACAGCTTTCTCCCCCTGCTTaGCAAAGGAGGTATCCACATAAATGTAATGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SQDLAAQLSPPA*QRRYPHKCNGL Trigger: AAGGCCATTACATTTATGTGGATACCTCCTTTGGCAAGCAGGGGGAGAAAGCTGTGCTGCTAAGTCCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS GCA 72 bp | CACAGCTGTATTCAATCAGTGCTCGTAGCCAGGAAATaGTCTGTTCACCTCTTCTCCTCCATAAGAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: HSCIQSVLVARK*SVHLFSSIRGT Trigger: AGTCCCTCTTATGGAGGAGAAGAGGTGAACAGAGCATTTCCTGGCTACGAGCACTGATTGAATACAGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377182.5 |
||
| CDS CAA 90 bp | ATTGTAATGTCATCCAGGGCTACAAGCCCACAGTCCCAGAAACTTTaGCATAGGCTCATGAAAACCACCTTGGTAGGCATGGGCTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: IVMSSRATSPQSQKL*HRLMKTTLVGMGFL Trigger: TAAGAAGCCCATGCCTACCAAGGTGGTTTTCATGAGCCTATGCAAAAGTTTCTGGGACTGTGGGCTTGTAGCCCTGGATGACATTACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | TCCGAATACTTCCTCCTCCAACAAACCAGTTCACATTaGGATTCCAGCGGTTCACAAAGCCACAGAGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SEYFLLQQTSSH*DSSGSQSHRDD Trigger: ATCATCTCTGTGGCTTTGTGAACCGCTGGAATCCCAATGTGAACTGGTTTGTTGGAGGAGGAAGTATTCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CCA 72 bp | CTTAAAGGTGATTTCAGCTTGCATCCAAACACCCCTTaGGGACTCCAACACAGACCAGATCTTCTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKGDFSLHPNTP*GLQHRPDLLLN Trigger: GTTCAAGAGAAGATCTGGTCTGTGTTGGAGTCCCCAAGGGGTGTTTGGATGCAAGCTGAAATCACCTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS CAA 72 bp | CCGGTTTCTTTTCTCCTGAGTAAATGTACATTCATCTaGCTCGAAAGTACACTCTCCAGGTGGAGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PVSFLLSKCTFI*LESTLSRWRWK Trigger: CTTCCACCTCCACCTGGAGAGTGTACTTTCGAGCAAGATGAATGTACATTTACTCAGGAGAAAAGAAACCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000377182.5 ENST00000460688.1 ENST00000617216.1 ENST00000619405.1 |
||
| CDS CCA 72 bp | TTTCATCTTCAAATCTCATGTAGAGGTTCAGCTGGCTaGGATCTGACAGAGACTCCGAAGATGTGGTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: FHLQISCRGSAG*DLTETPKMWLS Trigger: AGATAACCACATCTTCGGAGTCTCTGTCAGATCCCAGCCAGCTGAACCTCTACATGAGATTTGAAGATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS TCA 72 bp | CAAAGTCACATTCAATACAGTAGCCGGTTGTCATCTTaGTTTCAAATAGTGCGATGCTGGCTGTGTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QSHIQYSSRLSS*FQIVRCWLCFP Trigger: AGGGAAACACAGCCAGCATCGCACTATTTGAAATCAAGATGACAACCGGCTACTGTATTGAATGTGACTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377182.5 ENST00000617216.1 |
||
| CDS TCA 72 bp | ATTTCATTTAAGTCCTCAGAATATCCTGATGATTGTTaGGTTGTATCTTCCATTTCTCCACAGGGTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ISFKSSEYPDDC*VVSSISPQGPA Trigger: GGCAGGACCCTGTGGAGAAATGGAAGATACAACTCAACAATCATCAGGATATTCTGAGGACTTAAATGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377182.5 |
||