Pregenerated sensors for MALSU1 (Homo sapiens)
Ensembl gene IDs: ENSG00000156928Ensembl transcript IDs: ENST00000287543.4, ENST00000466681.2, ENST00000479974.1, ENST00000481564.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACTGATTTTTGGTTGCAGGTATAGCTCACTTATCGACAGTCTCTaGATGCCAGTTAGCAGGAGTGCCCATGAGGTACACAAGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VLIFGCRYSSLIDSL*MPVSRSAHEVHKPC Trigger: ACAAGGCTTGTGTACCTCATGGGCACTCCTGCTAACTGGCATGCAGAGACTGTCGATAAGTGAGCTATACCTGCAACCAAAAATCAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTCGACAGTCTCTGCATaGCAGTTAGCAGGAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TPGNSDDISRIKAACHKFSTVSA*QLAGVP Trigger: GGGCACTCCTGCTAACTGGCATGCAGAGACTGTCGA...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTCTTATCGACAGTCTCTaGATGCCAGTTAGCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TPGNSDDISRIKAACHKFLIDSL*MPVSRS Trigger: ACTCCTGCTAACTGGCATGCAGAGACTGTCGATAAG...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| 3UTR GCA 72 bp | GTTGCAGGTATAGCTCACTTATCGACAGTCTCTGCATaGCAGTTAGCAGGAGTGCCCATGAGGTACACAAGC | + |
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Preference number: 3 (lower is better) Translates to: VAGIAHLSTVSA*QLAGVPMRYTS Trigger: GCTTGTGTACCTCATGGGCACTCCTGCTAACTGGCATGCAGAGACTGTCGATAAGTGAGCTATACCTGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| 3UTR GCA 72 bp | TTTGGTTGCAGGTATAGCTCACTTATCGACAGTCTCTaGATGCCAGTTAGCAGGAGTGCCCATGAGGTACAC | + |
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Preference number: 3 (lower is better) Translates to: FGCRYSSLIDSL*MPVSRSAHEVH Trigger: GTGTACCTCATGGGCACTCCTGCTAACTGGCATGCAGAGACTGTCGATAAGTGAGCTATACCTGCAACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| 3UTR CCA 72 bp | ACACTTTGTTTACTTTCTTGTGTTACTGGAGTATTCTaGAAGGGTTACAGAAGTCCTCCTAGAAGAATATTA | + |
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Preference number: 3 (lower is better) Translates to: TLCLLSCVTGVF*KGYRSPPRRIL Trigger: TAATATTCTTCTAGGAGGACTTCTGTAACCCTTCCAGAATACTCCAGTAACACAAGAAAGTAAACAAAGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR TCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTCTGGGCGTCCCTCGTTaGCCGTCCCCTCCGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECLGVPR*PSPPPA Trigger: AGCGGGCGGAGGGGACGGTCAACGAGGGACGCCCAG...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTCCTACGGGAAGCCGCTaGACGGCCAGCAGCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECPTGSR*TASSRS Trigger: GCTTCGGCTGCTGGCCGTGCAGCGGCTTCCCGTAGG...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR GCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTAGCCCGGCAGAACGCTaGTCCTACGGGAAGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TPGNSDDISRIKAACHKFSPAER*SYGKPL Trigger: CAGCGGCTTCCCGTAGGAGCAGCGTTCTGCCGGGCT...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTCCGAGGAAACCGCCCTaGGCCACATTAGTGGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECPRKPP*ATLVGR Trigger: TCGCCCCACTAATGTGGCGCAGGGCGGTTTCCTCGG...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTGCCGCGGACAAAGTTTaGGGTCTGGCAAGCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECAADKV*GLASPA Trigger: TGCCGGGCTTGCCAGACCCCAAACTTTGTCCGCGGC...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGCCGCGTCCGATTCTaGGCGTCCCTCGTTGACCGT | + |
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Preference number: 4 (lower is better) Translates to: TPGNSDDISRIKAACHKFCRVRF*ASLVDR Trigger: ACGGTCAACGAGGGACGCCCAGAATCGGACGCGGCA...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTAGCCCAGGCTCGCTGTaGAGGCCGCGGACAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECSPGSL*RPRTKF Trigger: AAACTTTGTCCGCGGCCTGCACAGCGAGCCTGGGCT...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTTCGACAGTCTCTGCATaGCAGTTAGCAGGAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECSTVSA*QLAGVP Trigger: GGGCACTCCTGCTAACTGGCATGCAGAGACTGTCGA...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTACAAAGTTTGGGGTCTaGCAAGCCCGGCAGAACGCT | + |
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Preference number: 4 (lower is better) Translates to: TPGNSDDISRIKAACHKFTKFGV*QARQNA Trigger: AGCGTTCTGCCGGGCTTGCCAGACCCCAAACTTTGT...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTATCGATGTCAAACTTaGGACCAGTATGATCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TPGNSDDISRIKAACHKFYRCQT*DQYDLP Trigger: CGGCAGATCATACTGGTCCCAAGTTTGACATCGATA...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | TTTTTGGTTGCAGGTATAGCTCACTTATCGACAGTCTCTGCATGCCAGTTAGCATGTATATCTCATTTCTaGAGGAACCTGGATCACACA | + |
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Preference number: 4 (lower is better) Translates to: FLVAGIAHLSTVSACQLACISHF*RNLDHT Trigger: TGTGTGATCCAGGTTCCTCCAGAAATGAGATATACA...TGCTAACTGGCATGCAGAGACTGTCGATAAGTGAGCTATACCTGCAACCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR TCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTTTCTTGCCTCAGAAGTaGAACCATCATATCGATGTC | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECFLPQK*NHHIDV Trigger: GACATCGATATGATGGTTTCACTTCTGAGGCAAGAA...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR TCA 90 bp | TTTTTGGTTGCAGGTATAGCTCACTTATCGACAGTCTCTGCATGCCAGTTAGCATTGGGTAGAATGTACTaGTTTTTGGTTGCAGGTATA | + |
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Preference number: 4 (lower is better) Translates to: FLVAGIAHLSTVSACQLALGRMY*FLVAGI Trigger: TATACCTGCAACCAAAAATCAGTACATTCTACCCAA...TGCTAACTGGCATGCAGAGACTGTCGATAAGTGAGCTATACCTGCAACCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTTCAAATGAATCACCATaGTGCCAAAATCCACGCACA | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECSNESP*CQNPRT Trigger: TGTGCGTGGATTTTGGCAGCATGGTGATTCATTTGA...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR GCA 90 bp | TTTTTGGTTGCAGGTATAGCTCACTTATCGACAGTCTCTGCATGCCAGTTAGCAGTACTGATTTTTGGTTaGAGGTATAGCTCACTTATC | + |
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Preference number: 4 (lower is better) Translates to: FLVAGIAHLSTVSACQLAVLIFG*RYSSLI Trigger: GATAAGTGAGCTATACCTGCAACCAAAAATCAGTAC...TGCTAACTGGCATGCAGAGACTGTCGATAAGTGAGCTATACCTGCAACCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTGTTACTGGAGTATTCTaGAAGGGTTACAGAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TPGNSDDISRIKAACHKFVTGVF*KGYRSP Trigger: AGGACTTCTGTAACCCTTCCAGAATACTCCAGTAAC...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR TCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTCCTTCTATCTTAACATaGGGGTCACGTTTACATTTC | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECPSILT*GSRLHF Trigger: GAAATGTAAACGTGACCCTCATGTTAAGATAGAAGG...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTATTTCTGGAGGAACCTaGATCACACAAATGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECISGGT*ITQMSL Trigger: AAGAGACATTTGTGTGATCCAGGTTCCTCCAGAAAT...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR TCA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTCCATGGTACTTAATGTaGACCTTGATAATACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SDDISRIKAACHKFWVECPWYLM*TLIILL Trigger: CAAGAGTATTATCAAGGTTCACATTAAGTACCATGG...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTGCGTGTCATAAGTTTTaGGTAGAATGTACTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: TPGNSDDISRIKAACHKFACHKF*VECTDF Trigger: AAAATCAGTACATTCTACCCAAAACTTATGACACGC...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS GCA 90 bp | GGGGTCTGGCAAGCCCGGCAGAACGCTGCTCCTACGGGAAGCCGCTaGACGGCCAGCAGCCGAAGCCCGGGCTCGGCTCCAACCGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: GVWQARQNAAPTGSR*TASSRSPGSAPTAD Trigger: GTCCGCGGTTGGAGCCGAGCCCGGGCTTCGGCTGCTGGCCGTGCAGCGGCTTCCCGTAGGAGCAGCGTTCTGCCGGGCTTGCCAGACCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS CCA 90 bp | TCCAGCCCAGGCTCGCTGTGCAGGCCGCGGACAAAGTTTGGGGTCTaGCAAGCCCGGCAGAACGCTGCTCCTACGGGAAGCCGCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: SSPGSLCRPRTKFGV*QARQNAAPTGSRCT Trigger: CGTGCAGCGGCTTCCCGTAGGAGCAGCGTTCTGCCGGGCTTGCCAGACCCCAAACTTTGTCCGCGGCCTGCACAGCGAGCCTGGGCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTCTGGGCGTCCCTCGTaGACCGTCCCCTCCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: TPGNSDDISRIKAACHKFSGRPS*TVPSAR Trigger: GCGGGCGGAGGGGACGGTCAACGAGGGACGCCCAGA...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS-3UTR CAA 90 bp | TCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTGGGTAGAATGTGGCCGCGGACAAAGTTaGGGGTCTGGCAAGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: SDDISRIKAACHKFWVECGRGQS*GSGKPG Trigger: GCCGGGCTTGCCAGACCCCAAACTTTGTCCGCGGCC...ACATTCTACCCAAAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS GCA 90 bp | ATTTCTGGAGGAACCTGGATCACACAAATGTCTCTTGCATTTTCTTaGCTCAGAAGTGAAACCATCATATCGATGTCAAACTTGGGACCA | + |
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Preference number: 5 (lower is better) Translates to: ISGGTWITQMSLAFS*LRSETIISMSNLGP Trigger: TGGTCCCAAGTTTGACATCGATATGATGGTTTCACTTCTGAGGCAAGAAAATGCAAGAGACATTTGTGTGATCCAGGTTCCTCCAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS TCA 90 bp | ATTCATGCAAATTCTGAAAATTTGGGCTTCTTCTGTAACTTTGTATaGTGGGTTTACCCTCTAAGTGTTGCTCCTTGGCCTGATGCACTG | + |
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Preference number: 5 (lower is better) Translates to: IHANSENLGFFCNFV*WVYPLSVAPWPDAL Trigger: CAGTGCATCAGGCCAAGGAGCAACACTTAGAGGGTAAACCCATCATACAAAGTTACAGAAGAAGCCCAAATTTTCAGAATTTGCATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481564.1 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGAAATTCTGATGACATTTCCAGGATAAAGGCAGCGTGTCATAAGTTTTCACACAAATGTCTCTaGCATTTTCTTGCCTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TPGNSDDISRIKAACHKFSHKCL*HFLASE Trigger: TTCTGAGGCAAGAAAATGCAAGAGACATTTGTGTGA...AAACTTATGACACGCTGCCTTTATCCTGGAAATGTCATCAGAATTTCCTGGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466681.2 |
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| CDS CCA 90 bp | AGAAGTTCCACTAACAATCACAAAGTAATCTGTATATCTCATTTCTaGAGGAACCTGGATCACACAAATGTCTCTTGCATTTTCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: RSSTNNHKVICISHF*RNLDHTNVSCIFLP Trigger: AGGCAAGAAAATGCAAGAGACATTTGTGTGATCCAGGTTCCTCCAGAAATGAGATATACAGATTACTTTGTGATTGTTAGTGGAACTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS TCA 72 bp | TATGATCTGCCGCGTCCGATTCTGGGCGTCCCTCGTTaGCCGTCCCCTCCGCCCGCTCCTCCAGCCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: YDLPRPILGVPR*PSPPPAPPAQA Trigger: AGCCTGGGCTGGAGGAGCGGGCGGAGGGGACGGTCAACGAGGGACGCCCAGAATCGGACGCGGCAGATCATA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS CCA 72 bp | GGCTCGCTGTGCAGGCCGCGGACAAAGTTTGGGGTCTaGCAAGCCCGGCAGAACGCTGCTCCTACGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GSLCRPRTKFGV*QARQNAAPTGS Trigger: GCTTCCCGTAGGAGCAGCGTTCTGCCGGGCTTGCCAGACCCCAAACTTTGTCCGCGGCCTGCACAGCGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS CCA 72 bp | CAGCCCAGGCTCGCTGTGCAGGCCGCGGACAAAGTTTaGGGTCTGGCAAGCCCGGCAGAACGCTGCTCCTAC | + |
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Preference number: 6 (lower is better) Translates to: QPRLAVQAADKV*GLASPAERCSY Trigger: GTAGGAGCAGCGTTCTGCCGGGCTTGCCAGACCCCAAACTTTGTCCGCGGCCTGCACAGCGAGCCTGGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS CAA 72 bp | CCAGCCCAGGCTCGCTGTGCAGGCCGCGGACAAAGTTaGGGGTCTGGCAAGCCCGGCAGAACGCTGCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: PAQARCAGRGQS*GSGKPGRTLLL Trigger: TAGGAGCAGCGTTCTGCCGGGCTTGCCAGACCCCAAACTTTGTCCGCGGCCTGCACAGCGAGCCTGGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS CCA 72 bp | AAACTTGGGACCAGTATGATCTGCCGCGTCCGATTCTaGGCGTCCCTCGTTGACCGTCCCCTCCGCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: KLGTSMICRVRF*ASLVDRPLRPL Trigger: GAGCGGGCGGAGGGGACGGTCAACGAGGGACGCCCAGAATCGGACGCGGCAGATCATACTGGTCCCAAGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS CCA 72 bp | GCCTCAGAAGTGAAACCATCATATCGATGTCAAACTTaGGACCAGTATGATCTGCCGCGTCCGATTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ASEVKPSYRCQT*DQYDLPRPILG Trigger: GCCCAGAATCGGACGCGGCAGATCATACTGGTCCCAAGTTTGACATCGATATGATGGTTTCACTTCTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS CCA 72 bp | AATTGCGCGAGGAAAATCTGTTATCCTGGGCTAGAGTaGGGTGGGAGGCAGAGGTGTAAAGGACCATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: NCARKICYPGLE*GGRQRCKGPFG Trigger: TCCAAATGGTCCTTTACACCTCTGCCTCCCACCCCACTCTAGCCCAGGATAACAGATTTTCCTCGCGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479974.1 |
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| CDS CCA 72 bp | GCCTCAGAAGTGAAACCATCATATCGATGTCAAACTTaGGACCAGTATGATCTTGCTTTGCTTTGTGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: ASEVKPSYRCQT*DQYDLALLCVA Trigger: TGCGACACAAAGCAAAGCAAGATCATACTGGTCCCAAGTTTGACATCGATATGATGGTTTCACTTCTGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479974.1 |
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| CDS CAA 90 bp | TACCCTCTCTCATTACCAGAAAATATTCAAGATTCCCTTGCAAATTaGAAATTGCGCGAGGAAAATCTGTTATCCTGGGCTAGAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: YPLSLPENIQDSLAN*KLREENLLSWARVG Trigger: CCCCACTCTAGCCCAGGATAACAGATTTTCCTCGCGCAATTTCAAATTTGCAAGGGAATCTTGAATATTTTCTGGTAATGAGAGAGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479974.1 |
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| CDS CAA 90 bp | CTGTATATCTCATTTCTGGAGGAACCTGGATCACACAAATGTCTCTaGCATTTTCTTGCCTCAGAAGTGAAACCATCATATCGATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: LYISFLEEPGSHKCL*HFLASEVKPSYRCQ Trigger: TTGACATCGATATGATGGTTTCACTTCTGAGGCAAGAAAATGCAAGAGACATTTGTGTGATCCAGGTTCCTCCAGAAATGAGATATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000287543.4 ENST00000466681.2 ENST00000481564.1 |
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| CDS TCA 72 bp | AATTCTGAAAATTTGGGCTTCTTCTGTAACTTTGTATaGTGGGTTTACCCTCTAAGTGTTGCTCCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: NSENLGFFCNFV*WVYPLSVAPWP Trigger: AGGCCAAGGAGCAACACTTAGAGGGTAAACCCATCATACAAAGTTACAGAAGAAGCCCAAATTTTCAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481564.1 |
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