RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAGED2 (Homo sapiens)

Ensembl gene IDs: ENSG00000102316

Ensembl transcript IDs: ENST00000218439.8, ENST00000347546.8, ENST00000375053.6, ENST00000375058.5, ENST00000375060.5, ENST00000375068.6, ENST00000396224.1, ENST00000463787.5, ENST00000485483.1, ENST00000487463.1, ENST00000487482.5, ENST00000497484.1, ENST00000627068.2

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCCCAGATGTCCCCACTaGAACCAAGGCAGATACCTA +
Preference number: 2 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQPRCPH*NQGRYL
Trigger: TAGGTATCTGCCTTGGTTTCAGTGGGGACATCTGGG...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
3UTR-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCCAAAAGCAGTGTCTTaGCACACTCTCCACATCATT +
Preference number: 2 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNPKAVS*HTLHII
Trigger: AATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp TCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGGCCTGGGTGGCAGGTaGCTCCCGAGCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: STSFSNLGLPRIIQLLIPGLGGR*LPSLWG
Trigger: ACCCCAGAGGCTCGGGAGGCACCTGCCACCCAGGCC...TGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCACAGGCACCAGAGCTaGCACTGGTGCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGHRHQS*HWCWHQ
Trigger: CTGGTGCCAGCACCAGTGGCAGCTCTGGTGCCTGTG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGCTGCCACTGGTGCTaGCACCAGCTCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSCHWC*HQLHQG
Trigger: GCCTTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCAGCTGAGTAGTAGATaGGGCCTGGGTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGQLSSR*GLGGRC
Trigger: GCACCTGCCACCCAGGCCTCATCTACTACTCAGCTG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp CATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCCCCTACGGGCTTTAGGTaGTCTCAGGGAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HHSPTWAFLESSSSSSQPPTGFR*SQGEQG
Trigger: GCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGG...GGGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCCGAAGAGCCCAAATGTaGGAGTGGCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPARRAQM*EWRSGW
Trigger: CCAGCCTGACCGCCACTCTCACATTTGGGCTCTTCG...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCGAAGAGCCCAAATGTaGGAGTGGCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGRRAQM*EWRSGW
Trigger: CCAGCCTGACCGCCACTCTCACATTTGGGCTCTTCG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCGACCTCTGTGGCCTTTaGGGCCTTCGGTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPADLCGL*GLRCLW
Trigger: CCAGAGACACCGAAGGCCTCAAAGGCCACAGAGGTC...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCAGAGCTGCCACTGGTaGTGGCACCAGCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGQSCHW*WHQLHQ
Trigger: TTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCTCTG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGTAGTAGATGAGGCCTaGGTGGCAGGTGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGVVDEA*VAGASR
Trigger: TCGGGAGGCACCTGCCACCCAGGCCTCATCTACTAC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCTCAGGTTCATCTGCTaGGGCCTGAGAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGLRFIC*GLRGCS
Trigger: GCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGGGATGACTGGAGCTTaGCAGCTCTACGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGGMTGA*QLYGEP
Trigger: AGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGGCCACATCCCGAGGTaGTGGTGCTTCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGGHIPR*WCFRLL
Trigger: CAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCCTGGATCCGGGCTTTaGCCCAGGGTCCGATATCAG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGPGSGL*PRVRYQ
Trigger: CTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGCCACCACTGGTGCTaGCACTGGCACTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSHHWC*HWHWHC
Trigger: ACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTGGCT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCAGCTGCCACTGGTGCTaGCACCAGCTCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLSCHWC*HQLHQG
Trigger: GCCTTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCT...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCAGCTGAGTAGTAGATaGGGCCTGGGTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQQLSSR*GLGGRC
Trigger: GCACCTGCCACCCAGGCCTCATCTACTACTCAGCTG...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCAGCCAACCGAGTCCTTaGTGCCCTGCGGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLSQPSP*CPAGPK
Trigger: TTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCT...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCAGACCCAGCTTGGGTaGGTCCTTAGTCGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGQTQLG*VLSRSQ
Trigger: CTGGGAACGACTAAGGACTCACCCAAGCTGGGTCTG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCATCGCCTCTCGGTACTaGGCTGCCCATTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPAIASRY*AAHSLG
Trigger: TCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGAT...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCATCGCCTCTCGGTACTaGGCTGCCCATTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGIASRY*AAHSLG
Trigger: TCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGAT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGAGTCCTTGATGCCCTaGGGGCCCAAAAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGESLMP*GPKRLW
Trigger: CCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGCCTTGGCTTCAGCTaGAGCCTCAGCTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSLGFS*SLSCSL
Trigger: AAGGCTGCAGCTGAGGCTGCAGCTGAAGCCAAGGCT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCTTCGTCCCAGTTaGAGGGCCCGGCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSQLRPS*RARQHS
Trigger: AGAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTG...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCTTTGGCTTTAGCTTCTaGTCCCGCCTGGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPAFGFSF*SRLDPG
Trigger: GCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAAA...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGGCCTTCGGTGTCTCTaGGACCTCCACATTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGGLRCL*DLHILG
Trigger: ACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCCTCAGGTTCATCTGCTaGGGCCTGAGAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLLRFIC*GLRGCS
Trigger: GCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAG...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCCCTTCGGCCACCTGTaGTTCCAGAAGCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGPFGHL*FQKPDS
Trigger: AGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCGGGCCCAAAAGGCTATaGGACCCCTTGAAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSGPKRL*DPLKPC
Trigger: GCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCC...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCGGGATGACTGGAGCTTaGCAGCTCTACGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSGMTGA*QLYGEP
Trigger: AGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCC...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCGGCCACATCCCGAGGTaGTGGTGCTTCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLGHIPR*WCFRLL
Trigger: CAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCC...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCCCTGGATCCGGGCTTTaGCCCAGGGTCCGATATCAG +
Preference number: 4 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLPGSGL*PRVRYQ
Trigger: CTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGG...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTACTGGCACCAGTGCTaGCACTGCCACTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGYWHQC*HCHSLG
Trigger: CCCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGCTGCCACTGGTGCTaGCACCAGCTCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSCHWC*HQLHQG
Trigger: GCCTTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCAGCTGAGTAGTAGATaGGGCCTGGGTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINQLSSR*GLGGRC
Trigger: GCACCTGCCACCCAGGCCTCATCTACTACTCAGCTG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGCCAACCGAGTCCTTaGTGCCCTGCGGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSQPSP*CPAGPK
Trigger: TTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTTCAGGCTCTTGGGATaGCTGGAGCTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGFRLLG*LELGSS
Trigger: AGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGCATGTCCGAGCGCTTaGTGGGAATCTTCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGACPSA*WESSSG
Trigger: ACCAGACGAAGATTCCCATCAAGCGCTCGGACATGC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGGATGCACCCTGGCTTaGAGAGAAAGACTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGGCTLA*RERLAG
Trigger: TCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCTACGGCGAGCCTTTaGGACCCTTCGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSTASL*DPSATC
Trigger: ACAGGTGGCCGAAGGGTCTCAAAGGCTCGCCGTAGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375060.5
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGGCTCAGGTTCATCTaGTGGGGCCTGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINRLRFI*WGLRGC
Trigger: GCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp ATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTCTGAGACTGGGCAGCTaGACTCTCAGGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: MPKAVSWHTLHIILQLGPLRLGS*TLRLRF
Trigger: GAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAG...AGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp TCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGACCCCTTGAAGCCCTaGGGGCCATTGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: STSFSNLGLPRIIQLLIPDPLKP*GPLRPL
Trigger: TAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTC...TGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCGAGTCCTTGATGCCCTaGGGGCCCAAAAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSESLMP*GPKRLW
Trigger: CCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTC...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCAGAGCTGCCACTGGTaGTGGCACCAGCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINQSCHW*WHQLHQ
Trigger: TTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCTCTG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCACAGGCACCAGAGCTaGCACTGGTGCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNHRHQS*HWCWHQ
Trigger: CTGGTGCCAGCACCAGTGGCAGCTCTGGTGCCTGTG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTGGCCTTCGGTGTCTCTaGGACCTCCACATTCTGGGT +
Preference number: 4 (lower is better)
Translates to: MPKAVSWHTLHIILQLGPGLRCL*DLHILG
Trigger: ACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCC...AGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCTCAGGTTCATCTGCTaGGGCCTGAGAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINLRFIC*GLRGCS
Trigger: GCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGGGCCCAAAAGGCTATaGGACCCCTTGAAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINGPKRL*DPLKPC
Trigger: GCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGGTGCTTCAGGCTCTTaGGATGACTGGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGGASGS*DDWSLA
Trigger: TGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTCACATCCCGAGGTGGTaGTGCTTCAGGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: MPKAVSWHTLHIILQLGPHIPRW*CFRLLG
Trigger: TCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTG...AGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCCTGGATCCGGGCTTTaGCCCAGGGTCCGATATCAG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINPGSGL*PRVRYQ
Trigger: CTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCACTGGTGCTGGCACTaGCACTGGCACTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGHWCWH*HWHCYW
Trigger: CCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGCCACCACTGGTGCTaGCACTGGCACTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSHHWC*HWHWHC
Trigger: ACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTGGCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGACCTCCAGTGCCTTTaGGGCCTTCGGTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNDLQCL*GLRCLW
Trigger: CCAGAGACACCGAAGGCCTCAAAGGCACTGGAGGTC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTGGGTATCAGTCAGCTaGGTAGTAGATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGWVSVS*VVDEAW
Trigger: CCAGGCCTCATCTACTACTCAGCTGACTGATACCCA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGCCAACCGAGTCCTTaGTGCCCTGCGGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSQPSP*CPAGPK
Trigger: TTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCTTCAGGCTCTTGGGATaGCTGGAGCTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSFRLLG*LELGSS
Trigger: AGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAA...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCAGACCCAGCTTGGGTaGGTCCTTAGTCGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINQTQLG*VLSRSQ
Trigger: CTGGGAACGACTAAGGACTCACCCAAGCTGGGTCTG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp ATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCCCAAAGAGTGAATaGTGTATCCCAGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: MPKAVSWHTLHIILQLGPSPKSE*CIPGRS
Trigger: GCTGCGCCCTGGGATACATCATTCACTCTTTGGGGA...AGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACATCGCCTCTCGGTACTaGGCTGCCCATTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINIASRY*AAHSLG
Trigger: TCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGAT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCGAAGAGCCCAAATGTaGGAGTGGCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNRRAQM*EWRSGW
Trigger: CCAGCCTGACCGCCACTCTCACATTTGGGCTCTTCG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGGCATTGTCACAGCCTaGGGGTCAGCATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGGIVTA*GSAFCF
Trigger: GAAACAGAATGCTGACCCGCAGGCTGTGACAATGCC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGGCTCAGGTTCATCTaGTGGGGCCTGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNRLRFI*WGLRGC
Trigger: GCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGACTCTGATCACTGCTaGCATCCTCTTCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGDSDHC*HPLPHP
Trigger: TGGATGGGGAAGAGGATGGCAGCAGTGATCAGAGTC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCTCTCGGTACTGAGCTaGCCATTCCTTGGGATCCTT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGLSVLS*PFLGIL
Trigger: AAGGATCCCAAGGAATGGGCAGCTCAGTACCGAGAG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGCCTTGGCTTCAGCTaGAGCCTCAGCTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSLGFS*SLSCSL
Trigger: AAGGCTGCAGCTGAGGCTGCAGCTGAAGCCAAGGCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTTTGGCTTTAGCTTCTaGTCCCGCCTGGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINFGFSF*SRLDPG
Trigger: GCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAAA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCAGAGCTGCCACTGGTaGTGGCACCAGCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNQSCHW*WHQLHQ
Trigger: TTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCTCTG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACCACAGGCACCAGAGCTaGCACTGGTGCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNHRHQS*HWCWHQ
Trigger: CTGGTGCCAGCACCAGTGGCAGCTCTGGTGCCTGTG...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTGTCTCAATTTGGCCTaGCAAGAGCTGAGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGCLNLA*QELSLV
Trigger: GACGAGGCTCAGCTCTTGCCAGGCCAAATTGAGACA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375060.5
CDS-3UTR CCA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPAGTSTF*VTVNRV
Trigger: GACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCC...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGGTSTF*VTVNRV
Trigger: GACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTCTTTGAGACCTCTGTaGCCTTTGAGACCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSLRPL*PLRPQR
Trigger: CCTCTGGGGTCTCAAAGGCCACAGAGGTCTCAAAGA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGTAGTAGATGAGGCCTaGGTGGCAGGTGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNVVDEA*VAGASR
Trigger: TCGGGAGGCACCTGCCACCCAGGCCTCATCTACTAC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGGGATGACTGGAGCTTaGCAGCTCTACGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNGMTGA*QLYGEP
Trigger: AGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCAGGGGGATTGCTATTaGGGACTCTGGCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGQGDCY*GLWHSP
Trigger: TGGACTATGCCAGAGTCCCCAATAGCAATCCCCCTG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCCTGGATCCGGGCTTTaGCCCAGGGTCCGATATCAG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNPGSGL*PRVRYQ
Trigger: CTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTACTGGCACCAGTGCTaGCACTGCCACTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINYWHQC*HCHSLG
Trigger: CCCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCCACTGGTGCTGGCACTaGCACTGGCACTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLHWCWH*HWHCYW
Trigger: CCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTG...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGCCACCACTGGTGCTaGCACTGGCACTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSHHWC*HWHWHC
Trigger: ACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTGGCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCAGCTGCCACTGGTGCTaGCACCAGCTCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISCHWC*HQLHQG
Trigger: GCCTTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGGCTACTGTCCTTTTCTaGAGCTTCAGCCTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQATVLF*SFSLEA
Trigger: CGCTTCCAGGCTGAAGCTTCAGAAAAGGACAGTAGC...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGCAGCCTCAGTCTCCTaGGCCTTTGTATTGACCTTT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGAASVS*AFVLTF
Trigger: AAAGGTCAATACAAAGGCTCAGGAGACTGAGGCTGC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCCTACGGGCTTTAGGTaGTCTCAGGGAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNPTGFR*SQGEQG
Trigger: GCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGCCTGCTCGTTCAATaGTTTCGGGGTACACATCAG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSLLVQ*FRGTHQ
Trigger: CTGATGTGTACCCCGAAATCATTGAACGAGCAGGCT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCCCCAAAGAGTGAATaGTGTATCCCAGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSPKSE*CIPGRS
Trigger: GCTGCGCCCTGGGATACATCATTCACTCTTTGGGGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCCTACAATTCCCGAGTaGGTCCACTCACTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINPTIPE*VHSLQA
Trigger: GGCTTGGAGTGAGTGGACGCACTCGGGAATTGTAGG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375060.5
CDS-3UTR GCA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACAGGCTCAGGTTCATCTaGTGGGGCCTGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNRLRFI*WGLRGC
Trigger: GCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCT...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCAGGCTCAGGTTCATCTaGTGGGGCCTGAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIRLRFI*WGLRGC
Trigger: GCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCTGAGACTGGGCAGCTaGACTCTCAGGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNLRLGS*TLRLRF
Trigger: GAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCTCTTCCCCATCCAGATaGTTCACCTTTCGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPASSPSR*FTFRAF
Trigger: GAAAGCCCGAAAGGTGAAGCATCTGGATGGGGAAGA...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp TCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGACTCTGATCACTGCTaGCATCCTCTTCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: STSFSNLGLPRIIQLLIPDSDHC*HPLPHP
Trigger: TGGATGGGGAAGAGGATGGCAGCAGTGATCAGAGTC...TGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGAGTCCTTGATGCCCTaGGGGCCCAAAAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNESLMP*GPKRLW
Trigger: CCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR GCA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCTCATTTGCCCTCCCTTaGAAAAGGGCCACATCCCGA +
Preference number: 4 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLSFALP*KRATSR
Trigger: TCGGGATGTGGCCCTTTTGCAAGGGAGGGCAAATGA...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGCCTTGGCTTCAGCTaGAGCCTCAGCTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSLGFS*SLSCSL
Trigger: AAGGCTGCAGCTGAGGCTGCAGCTGAAGCCAAGGCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCAGCTTCGTCCCAGTTaGAGGGCCCGGCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIQLRPS*RARQHS
Trigger: AGAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTTTGGCTTTAGCTTCTaGTCCCGCCTGGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNFGFSF*SRLDPG
Trigger: GCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAAA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCAGAGCTGCCACTGGTaGTGGCACCAGCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIQSCHW*WHQLHQ
Trigger: TTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCTCTG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTCTGAAGCTTCAGCCTaGAAGCGAGTTAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSEASA*KRVRPA
Trigger: TGCAGGTCTAACTCGCTTCCAGGCTGAAGCTTCAGA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCCTTTTTGGTCTCAGTaGCAGGCATTGTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGPFWSQ*QALSQP
Trigger: AGGCTGTGACAATGCCTGCCACTGAGACCAAAAAGG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGGGCCCAAAAGGCTATaGGACCCCTTGAAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIGPKRL*DPLKPC
Trigger: GCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCACATCCCGAGGTGGTaGTGCTTCAGGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNHIPRW*CFRLLG
Trigger: TCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGGCCACATCCCGAGGTaGTGGTGCTTCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIGHIPR*WCFRLL
Trigger: CAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTCAGGGGGATTGCTATTaGGGACTCTGGCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: MPKAVSWHTLHIILQLGPQGDCY*GLWHSP
Trigger: TGGACTATGCCAGAGTCCCCAATAGCAATCCCCCTG...AGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp CATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCCGAGCTGCCCATTCCTTaGGATCCTTCTTTTGTACCT +
Preference number: 4 (lower is better)
Translates to: HHSPTWAFLESSSSSSQPELPIP*DPSFVP
Trigger: AGGTACAAAAGAAGGATCCCAAGGAATGGGCAGCTC...GGGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTACTGGCACCAGTGCTaGCACTGCCACTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNYWHQC*HCHSLG
Trigger: CCCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCACTGGTGCTGGCACTaGCACTGGCACTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINHWCWH*HWHCYW
Trigger: CCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCAGCCACCACTGGTGCTaGCACTGGCACTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISHHWC*HWHWHC
Trigger: ACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTGGCT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGCTACTGTCCTTTTCTaGAGCTTCAGCCTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINATVLF*SFSLEA
Trigger: CGCTTCCAGGCTGAAGCTTCAGAAAAGGACAGTAGC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGTATCAGCCACATGGCTaGCCTTTTTGGTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQYQPHG*PFWSQW
Trigger: CCACTGAGACCAAAAAGGTCAGCCATGTGGCTGATA...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCCTACGGGCTTTAGGTaGTCTCAGGGAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIPTGFR*SQGEQG
Trigger: GCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTTCAGGCTCTTGGGATaGCTGGAGCTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNFRLLG*LELGSS
Trigger: AGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGCATGTCCGAGCGCTTaGTGGGAATCTTCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNACPSA*WESSSG
Trigger: ACCAGACGAAGATTCCCATCAAGCGCTCGGACATGC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTGGGCTCTAAGGTGCTaGGAAGAATGTACAAGTGGT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGWALRC*EECTSG
Trigger: ACCACTTGTACATTCTTCTCAGCACCTTAGAGCCCA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCAGACCCAGCTTGGGTaGGTCCTTAGTCGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIQTQLG*VLSRSQ
Trigger: CTGGGAACGACTAAGGACTCACCCAAGCTGGGTCTG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCCCCAAAGAGTGAATaGTGTATCCCAGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSPKSE*CIPGRS
Trigger: GCTGCGCCCTGGGATACATCATTCACTCTTTGGGGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGGATGCACCCTGGCTTaGAGAGAAAGACTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNGCTLA*RERLAG
Trigger: TCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCCTACAATTCCCGAGTaGGTCCACTCACTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNPTIPE*VHSLQA
Trigger: GGCTTGGAGTGAGTGGACGCACTCGGGAATTGTAGG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375060.5
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCTGAGACTGGGCAGCTaGACTCTCAGGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNILRLGS*TLRLRF
Trigger: GAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGACTCTGATCACTGCTaGCATCCTCTTCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINDSDHC*HPLPHP
Trigger: TGGATGGGGAAGAGGATGGCAGCAGTGATCAGAGTC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGACCCCTTGAAGCCCTaGGGGCCATTGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIDPLKP*GPLRPL
Trigger: TAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCATTTGCCCTCCCTTaGAAAAGGGCCACATCCCGA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSFALP*KRATSR
Trigger: TCGGGATGTGGCCCTTTTGCAAGGGAGGGCAAATGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCTCCAAGGAATAGCCTaGTCGTTCAATGATTTCGGG +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGLQGIA*SFNDFG
Trigger: CCCGAAATCATTGAACGAGCAGGCTATTCCTTGGAG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCAGCCTTGGCTTCAGCTaGAGCCTCAGCTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISLGFS*SLSCSL
Trigger: AAGGCTGCAGCTGAGGCTGCAGCTGAAGCCAAGGCT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTGGTACTGGCACCAGTaGTGGCACTGCCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNWYWHQ*WHCHSL
Trigger: AAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTACCA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGGCCTTCGGTGTCTCTaGGACCTCCACATTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIGLRCL*DLHILG
Trigger: ACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCCTTTTTGGTCTCAGTaGCAGGCATTGTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSPFWSQ*QALSQP
Trigger: AGGCTGTGACAATGCCTGCCACTGAGACCAAAAAGG...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACCCCTTCGGCCACCTGTaGTTCCAGAAGCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNPFGHL*FQKPDS
Trigger: AGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGG...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCCCTTCGGCCACCTGTaGTTCCAGAAGCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIPFGHL*FQKPDS
Trigger: AGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCACATCCCGAGGTGGTaGTGCTTCAGGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIHIPRW*CFRLLG
Trigger: TCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCAGGGGGATTGCTATTaGGGACTCTGGCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINQGDCY*GLWHSP
Trigger: TGGACTATGCCAGAGTCCCCAATAGCAATCCCCCTG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGAGCTGCCCATTCCTTaGGATCCTTCTTTTGTACCT +
Preference number: 4 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGELPIP*DPSFVP
Trigger: AGGTACAAAAGAAGGATCCCAAGGAATGGGCAGCTC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTACTGGCACCAGTGCTaGCACTGCCACTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIYWHQC*HCHSLG
Trigger: CCCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTCACTGTTATTGGTACTaGTACTGGCACCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: MPKAVSWHTLHIILQLGPHCYWY*YWHQCW
Trigger: CCAGCACTGGTGCCAGTACCAGTACCAATAACAGTG...AGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTGCTGGCACTGGCACTaGCACTGTTATTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINCWHWH*HCYWYW
Trigger: CCAGTACCAATAACAGTGCCAGTGCCAGTGCCAGCA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCACTGGTGCTGGCACTaGCACTGGCACTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNHWCWH*HWHCYW
Trigger: CCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp ATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTGTCTCAATTTGGCCTaGCAAGAGCTGAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: MPKAVSWHTLHIILQLGPCLNLA*QELSLV
Trigger: GACAAGGCTCAGCTCTTGCCAGGCCAAATTGAGACA...AGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGCTACTGTCCTTTTCTaGAGCTTCAGCCTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNATVLF*SFSLEA
Trigger: CGCTTCCAGGCTGAAGCTTCAGAAAAGGACAGTAGC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGCAGCCTCAGTCTCCTaGGCCTTTGTATTGACCTTT +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINAASVS*AFVLTF
Trigger: AAAGGTCAATACAAAGGCTCAGGAGACTGAGGCTGC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGCATGTCCGAGCGCTTaGTGGGAATCTTCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIACPSA*WESSSG
Trigger: ACCAGACGAAGATTCCCATCAAGCGCTCGGACATGC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGGATGCACCCTGGCTTaGAGAGAAAGACTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIGCTLA*RERLAG
Trigger: TCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGGCATTGTCACAGCCTaGGGGTCAGCATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNGIVTA*GSAFCF
Trigger: GAAACAGAATGCTGACCCGCAGGCTGTGACAATGCC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCTTCCCCATCCAGATaGTTCACCTTTCGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSSPSR*FTFRAF
Trigger: GAAAGCCCGAAAGGTGAAGCATCTGGATGGGGAAGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGACTCTGATCACTGCTaGCATCCTCTTCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNDSDHC*HPLPHP
Trigger: TGGATGGGGAAGAGGATGGCAGCAGTGATCAGAGTC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCATTTGCCCTCCCTTaGAAAAGGGCCACATCCCGA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSFALP*KRATSR
Trigger: TCGGGATGTGGCCCTTTTGCAAGGGAGGGCAAATGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCTTCACCAAATCATTTaGCCTCCCTTGCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSLHQII*PPLQKG
Trigger: GCCCTTTTGCAAGGGAGGGCAAATGATTTGGTGAAG...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTGGTACTGGCACCAGTaGTGGCACTGCCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIWYWHQ*WHCHSL
Trigger: AAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTACCA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTGTCTCAATTTGGCCTaGCAAGAGCTGAGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNCLNLA*QELSLV
Trigger: GACGAGGCTCAGCTCTTGCCAGGCCAAATTGAGACA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375060.5
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCTGAAGCTTCAGCCTaGAAGCGAGTTAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSEASA*KRVRPA
Trigger: TGCAGGTCTAACTCGCTTCCAGGCTGAAGCTTCAGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNGTSTF*VTVNRV
Trigger: GACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCCTTTTTGGTCTCAGTaGCAGGCATTGTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINPFWSQ*QALSQP
Trigger: AGGCTGTGACAATGCCTGCCACTGAGACCAAAAAGG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACGGTGCTTCAGGCTCTTaGGATGACTGGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNGASGS*DDWSLA
Trigger: TGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACC...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGGTGCTTCAGGCTCTTaGGATGACTGGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIGASGS*DDWSLA
Trigger: TGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCAGGGGGATTGCTATTaGGGACTCTGGCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNQGDCY*GLWHSP
Trigger: TGGACTATGCCAGAGTCCCCAATAGCAATCCCCCTG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGCACTGCCACTCTCTTaGGCTTTGGCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINALPLS*ALALAS
Trigger: AGAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCACTGTTATTGGTACTaGTACTGGCACCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINHCYWY*YWHQCW
Trigger: CCAGCACTGGTGCCAGTACCAGTACCAATAACAGTG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGCTACTGTCCTTTTCTaGAGCTTCAGCCTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIATVLF*SFSLEA
Trigger: CGCTTCCAGGCTGAAGCTTCAGAAAAGGACAGTAGC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTGGGTATCAGTCAGCTaGGTAGTAGATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIWVSVS*VVDEAW
Trigger: CCAGGCCTCATCTACTACTCAGCTGACTGATACCCA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTATCAGCCACATGGCTaGCCTTTTTGGTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNYQPHG*PFWSQW
Trigger: CCACTGAGACCAAAAAGGTCAGCCATGTGGCTGATA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGCAGCCTCAGTCTCCTaGGCCTTTGTATTGACCTTT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNAASVS*AFVLTF
Trigger: AAAGGTCAATACAAAGGCTCAGGAGACTGAGGCTGC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGCCTGCTCGTTCAATaGTTTCGGGGTACACATCAG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSLLVQ*FRGTHQ
Trigger: CTGATGTGTACCCCGAAATCATTGAACGAGCAGGCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTGGGCTCTAAGGTGCTaGGAAGAATGTACAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINWALRC*EECTSG
Trigger: ACCACTTGTACATTCTTCTCAGCACCTTAGAGCCCA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACACTGTCAACAGAGTCTaGATCATCGAGCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINTVNRV*IIELLS
Trigger: GGACAGTAGCTCGATGATGCAGACTCTGTTGACAGT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGGCATTGTCACAGCCTaGGGGTCAGCATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIGIVTA*GSAFCF
Trigger: GAAACAGAATGCTGACCCGCAGGCTGTGACAATGCC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCTTCCCCATCCAGATaGTTCACCTTTCGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSSPSR*FTFRAF
Trigger: GAAAGCCCGAAAGGTGAAGCATCTGGATGGGGAAGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCTTCACCAAATCATTTaGCCTCCCTTGCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINLHQII*PPLQKG
Trigger: GCCCTTTTGCAAGGGAGGGCAAATGATTTGGTGAAG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACCTCCAAGGAATAGCCTaGTCGTTCAATGATTTCGGG +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINLQGIA*SFNDFG
Trigger: CCCGAAATCATTGAACGAGCAGGCTATTCCTTGGAG...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCTCTCGGTACTGAGCTaGCCATTCCTTGGGATCCTT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNILSVLS*PFLGIL
Trigger: AAGGATCCCAAGGAATGGGCAGCTCAGTACCGAGAG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCTGAAGCTTCAGCCTaGAAGCGAGTTAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSEASA*KRVRPA
Trigger: TGCAGGTCTAACTCGCTTCCAGGCTGAAGCTTCAGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIGTSTF*VTVNRV
Trigger: GACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTCTTTGAGACCTCTGTaGCCTTTGAGACCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISLRPL*PLRPQR
Trigger: CCTCTGGGGTCTCAAAGGCCACAGAGGTCTCAAAGA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCCTTTTTGGTCTCAGTaGCAGGCATTGTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNPFWSQ*QALSQP
Trigger: AGGCTGTGACAATGCCTGCCACTGAGACCAAAAAGG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGCACTGCCACTCTCTTaGGCTTTGGCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNALPLS*ALALAS
Trigger: AGAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCACTGTTATTGGTACTaGTACTGGCACCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNHCYWY*YWHQCW
Trigger: CCAGCACTGGTGCCAGTACCAGTACCAATAACAGTG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACTGCTGGCACTGGCACTaGCACTGTTATTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNCWHWH*HCYWYW
Trigger: CCAGTACCAATAACAGTGCCAGTGCCAGTGCCAGCA...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTATCAGCCACATGGCTaGCCTTTTTGGTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIYQPHG*PFWSQW
Trigger: CCACTGAGACCAAAAAGGTCAGCCATGTGGCTGATA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTGGGCTCTAAGGTGCTaGGAAGAATGTACAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNWALRC*EECTSG
Trigger: ACCACTTGTACATTCTTCTCAGCACCTTAGAGCCCA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp CATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCCAATAAAAGGGTCAATTaGCATCCAGCAAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: HHSPTWAFLESSSSSSQPNKRVN*HPANRK
Trigger: CTTTCTGTTTGCTGGATGTCAATTGACCCTTTTATT...GGGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTGGGTATCAGTCAGCTaGGTAGTAGATGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIWVSVS*VVDEAF
Trigger: GAAGGCCTCATCTACTACTCAGCTGACTGATACCCA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375060.5
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATACTGTCAACAGAGTCTaGATCATCGAGCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNTVNRV*IIELLS
Trigger: GGACAGTAGCTCGATGATGCAGACTCTGTTGACAGT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTCTTCCCCATCCAGATaGTTCACCTTTCGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISSPSR*FTFRAF
Trigger: GAAAGCCCGAAAGGTGAAGCATCTGGATGGGGAAGA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCTCCAAGGAATAGCCTaGTCGTTCAATGATTTCGGG +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNLQGIA*SFNDFG
Trigger: CCCGAAATCATTGAACGAGCAGGCTATTCCTTGGAG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCATATTCAGGGGGATTaGTATTGGGGACTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNHIQGD*YWGLWH
Trigger: ATGCCAGAGTCCCCAATAGCAATCCCCCTGAATATG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCTTTGTATCAGCCACATaGCTGACCTTTTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSFVSAT*LTFLVS
Trigger: TGAGACCAAAAAGGTCAGCCATGTGGCTGATACAAA...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGCACTGCCACTCTCTTaGGCTTTGGCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIALPLS*ALALAS
Trigger: AGAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCACTGTTATTGGTACTaGTACTGGCACCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIHCYWY*YWHQCW
Trigger: CCAGCACTGGTGCCAGTACCAGTACCAATAACAGTG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTGTCTCAATTTGGCCTaGCAAGAGCTGAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNICLNLA*QELSLV
Trigger: GACAAGGCTCAGCTCTTGCCAGGCCAAATTGAGACA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347546.8
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCTTCACCAAATCATTTaGCCTCCCTTGCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNILHQII*PPLQKG
Trigger: GCCCTTTTGCAAGGGAGGGCAAATGATTTGGTGAAG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR GCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCATATTCAGGGGGATTaGTATTGGGGACTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIHIQGD*YWGLWH
Trigger: ATGCCAGAGTCCCCAATAGCAATCCCCCTGAATATG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTTTGTATCAGCCACATaGCTGACCTTTTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINFVSAT*LTFLVS
Trigger: TGAGACCAAAAAGGTCAGCCATGTGGCTGATACAAA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACATGGGAATCTTCGTCTaGTCTTTAGCCAAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINMGIFV*SLAKRY
Trigger: GTACCTTTTGGCTAAAGACCAGACGAAGATTCCCAT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGAGCTGCCCATTCCTTaGGATCCTTCTTTTGTACCT +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIELPIP*DPSFVP
Trigger: AGGTACAAAAGAAGGATCCCAAGGAATGGGCAGCTC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCATCAATTTCCTTCAATTaGATCCCAAATACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: STSFSNLGLPRIIQLLIPSISFN*IPNTFS
Trigger: GGAGAAGGTATTTGGGATTCAATTGAAGGAAATTGA...TGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATGGGAATCTTCGTCTaGTCTTTAGCCAAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNMGIFV*SLAKRY
Trigger: GTACCTTTTGGCTAAAGACCAGACGAAGATTCCCAT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACCATCATTCTCCAACTTaGGCCTTCCTAGAATCATCC +
Preference number: 4 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNHHSPT*AFLESS
Trigger: GGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATG...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACCCAAAAGCAGTGTCTTaGCACACTCTCCACATCATT +
Preference number: 4 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNPKAVS*HTLHII
Trigger: AATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGG...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTTTGTATCAGCCACATaGCTGACCTTTTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIFVSAT*LTFLVS
Trigger: TGAGACCAAAAAGGTCAGCCATGTGGCTGATACAAA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCATGGGAATCTTCGTCTaGTCTTTAGCCAAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIMGIFV*SLAKRY
Trigger: GTACCTTTTGGCTAAAGACCAGACGAAGATTCCCAT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR TCA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTCAATTTCCTTCAATTaGATCCCAAATACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISISFN*IPNTFS
Trigger: GGAGAAGGTATTTGGGATTCAATTGAAGGAAATTGA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS TCA 90 bp GAGCTTGGCAGCTCTACGGCGAGCCTTGCCCCTACGGGCTTTAGGTaGTCTCAGGGAGAGCAAGGCTCTCCGGGCCCAAGCAGCCAACCG +
Preference number: 5 (lower is better)
Translates to: ELGSSTASLAPTGFR*SQGEQGSPGPSSQP
Trigger: CGGTTGGCTGCTTGGGCCCGGAGAGCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS GCA 90 bp GGATCCGGGCTTTGGCCCAGGGTCCGATATCAGCTTCGTCCCAGTTaGAGGGCCCGGCAGCATTCTCCGAGCCGAGCCCAATGCCCATTC +
Preference number: 5 (lower is better)
Translates to: GSGLWPRVRYQLRPS*RARQHSPSRAQCPF
Trigger: GAATGGGCATTGGGCTCGGCTCGGAGAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTGATATCGGACCCTGGGCCAAAGCCCGGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS TCA 90 bp CAAAAGGGCCACATCCCGAGGTGGTGGTGCTTCAGGCTCTTGGGATaGCTGGAGCTTGGCAGCTCTACGGCGAGCCTTGCCCCTACGGGC +
Preference number: 5 (lower is better)
Translates to: QKGHIPRWWCFRLLG*LELGSSTASLAPTG
Trigger: GCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 90 bp AAGCAGCCAACCGAGTCCTTGATGCCCTGCGGGCCCAAAAGGCTATaGGACCCCTTGAAGCCCTGCGGGCCATTGAGGCCATTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: KQPTESLMPCGPKRL*DPLKPCGPLRPLGP
Trigger: AGGCCCTAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 90 bp AGGGCCACATCCCGAGGTGGTGGTGCTTCAGGCTCTTGGGATGACTaGAGCTTGGCAGCTCTACGGCGAGCCTTGCCCCTACGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: RATSRGGGASGSWDD*SLAALRRALPLRAL
Trigger: TAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 90 bp AGGGCCACATCCCGAGGTGGTGGTGCTTCAGGCTCTTGGGATGACTaGAGCTTGGCAGCTCTACGGCGAGCCTTTGAGACCCTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: RATSRGGGASGSWDD*SLAALRRAFETLRP
Trigger: TGGCCGAAGGGTCTCAAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375060.5
ENST00000627068.2
CDS CCA 90 bp CCTTGCAAAAGGGCCACATCCCGAGGTGGTGGTGCTTCAGGCTCTTaGGATGACTGGAGCTTGGCAGCTCTACGGCGAGCCTTGCCCCTA +
Preference number: 5 (lower is better)
Translates to: PCKRATSRGGGASGS*DDWSLAALRRALPL
Trigger: TAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCCTTTTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 90 bp GCACTGCCACTCTCTTGGGCTTTGGCTTTAGCTTCTGCTCCCGCCTaGATCCGGGCTTTGGCCCAGGGTCCGATATCAGCTTCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ALPLSWALALASAPA*IRALAQGPISASSQ
Trigger: CTGGGACGAAGCTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS GCA 90 bp TTTGGCCTGGCAAGAGCTGAGCCTCGTCCTCCTACAATTCCCGAGTaGGTCCACTCACTCCAAGCCCCTCCGAAACTCGGAGACTGCCCT +
Preference number: 5 (lower is better)
Translates to: FGLARAEPRPPTIPE*VHSLQAPPKLGDCP
Trigger: AGGGCAGTCTCCGAGTTTCGGAGGGGCTTGGAGTGAGTGGACGCACTCGGGAATTGTAGGAGGACGAGGCTCAGCTCTTGCCAGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218439.8
CDS CCA 90 bp CCTTGCAAAAGGGCCACATCCCGAGGTGGTGGTGCTTCAGGCTCTTaGGATGACTGGAGCTTGGCAGCTCTACGGCGAGCCTTTGAGACC +
Preference number: 5 (lower is better)
Translates to: PCKRATSRGGGASGS*DDWSLAALRRAFET
Trigger: GGTCTCAAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCCTTTTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375060.5
ENST00000627068.2
CDS GCA 90 bp TTTGACCTTGGGCCGAGTATCCTGATTCTCCTGAGACTGGGCAGCTaGACTCTCAGGCTCAGGTTCATCTGCTGGGGCCTGAGAGGGTGC +
Preference number: 5 (lower is better)
Translates to: FDLGPSILILLRLGS*TLRLRFICWGLRGC
Trigger: GCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAGGAGAATCAGGATACTCGGCCCAAGGTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000497484.1
ENST00000627068.2
CDS GCA 90 bp AGCTCTAATCTCGGCCCTAGCCTTGGCTTCAGCTGCAGCCTCAGCTaGAGCCTTCAAATCCGCTTCCATCGCCTCTCGGTACTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSNLGPSLGFSCSLS*SLQIRFHRLSVLSC
Trigger: GCAGCTCAGTACCGAGAGGCGATGGAAGCGGATTTGAAGGCTGCAGCTGAGGCTGCAGCTGAAGCCAAGGCTAGGGCCGAGATTAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CCA 90 bp CTCCTGAGACTGGGCAGCTGCACTCTCAGGCTCAGGTTCATCTGCTaGGGCCTGAGAGGGTGCAGCCTCAGTCTCCTGAGCCTTTGTATT +
Preference number: 5 (lower is better)
Translates to: LLRLGSCTLRLRFIC*GLRGCSLSLLSLCI
Trigger: AATACAAAGGCTCAGGAGACTGAGGCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000497484.1
ENST00000627068.2
CDS CCA 90 bp GGGCCATTGAGGCCATTAGGGCCTTTGAGACCCTTCGGCCACCTGTaGTTCCAGAAGCCTGACTCTGATCACTGCTGCCATCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GPLRPLGPLRPFGHL*FQKPDSDHCCHPLP
Trigger: GGGAAGAGGATGGCAGCAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCTCAATGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 90 bp AGCCACCACTGGTGCTGGCACTGGCACTGGCACTGTTATTGGTACTaGTACTGGCACCAGTGCTGGCACTGCCACTCTCTTGGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: SHHWCWHWHWHCYWY*YWHQCWHCHSLGLW
Trigger: CCAAAGCCCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS GCA 90 bp TTTGACCTTGGGCCGAGTATCCTGATTCTCCTGAGACTGGGCAGCTaGACTCTCAGGCTCAGGTTCATCTGCTGGGGCCTGGAAGCGAGT +
Preference number: 5 (lower is better)
Translates to: FDLGPSILILLRLGS*TLRLRFICWGLEAS
Trigger: ACTCGCTTCCAGGCCCCAGCAGATGAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAGGAGAATCAGGATACTCGGCCCAAGGTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463787.5
CDS CCA 90 bp TCTCAATTTGGCCTGGCAAGAGCTGAGCCTGAAGGGGAGAAGGCCTaGGTCAAGTTGAAGCCCACTGAACGTCCTCTCCCCTGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: SQFGLARAEPEGEKA*VKLKPTERPLPCCA
Trigger: GGCACAACAGGGGAGAGGACGTTCAGTGGGCTTCAACTTGACCCAGGCCTTCTCCCCTTCAGGCTCAGCTCTTGCCAGGCCAAATTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485483.1
CDS GCA 90 bp CCCTTCGGCCACCTGTGGTTCCAGAAGCCTGACTCTGATCACTGCTaGCATCCTCTTCCCCATCCAGATGCTTCACCTTTCGGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PFGHLWFQKPDSDHC*HPLPHPDASPFGLS
Trigger: AGAAAGCCCGAAAGGTGAAGCATCTGGATGGGGAAGAGGATGGCAGCAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
ENST00000627068.2
CDS GCA 90 bp AGACCCTTCGGCCACCTGTGGTTCCAGAAGCCTGACTCTGATCACTaGTGCCATCCTCTTCCCCATCCAGATGCTTCACCTTTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: RPFGHLWFQKPDSDH*CHPLPHPDASPFGL
Trigger: AAGCCCGAAAGGTGAAGCATCTGGATGGGGAAGAGGATGGCAGCAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
ENST00000627068.2
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCAGCCAACCGAGTCCTaGATGCCCTGCGGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGQPTES*MPCGPK
Trigger: TTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGCTCTACGGCGAGCCTaGCCCCTACGGGCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGALRRA*PLRALG
Trigger: ACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTCAGCTTCGTCCCAGTaGCAGGGCCCGGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSASSQ*QGPAAF
Trigger: GAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTGA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGCCTGGATCCGGGCTTaGGCCCAGGGTCCGATATCA +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGAWIRA*AQGPIS
Trigger: TGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS TCA 90 bp GCCTCAGCTGCAGCCTTCAAATCCGCTTCCATCGCCTCTCGGTACTaGGCTGCCCATTCCTTGGGATCCTTCTTTTGTACCTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: ASAAAFKSASIASRY*AAHSLGSFFCTLQA
Trigger: TGCCTGCAAGGTACAAAAGAAGGATCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGATGGAAGCGGATTTGAAGGCTGCAGCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS GCA 90 bp AGCTGCACTCTCAGGCTCAGGTTCATCTGCTGGGGCCTGAGAGGGTaGAGCCTCAGTCTCCTGAGCCTTTGTATTGACCTTTGTATCAGC +
Preference number: 5 (lower is better)
Translates to: SCTLRLRFICWGLRG*SLSLLSLCIDLCIS
Trigger: GCTGATACAAAGGTCAATACAAAGGCTCAGGAGACTGAGGCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCTGAGAGTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000497484.1
ENST00000627068.2
CDS-3UTR CAA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCTCTCAGTGGCAGGCATaGTCACAGCCTGCGGGTCAG +
Preference number: 5 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPASQWQA*SQPAGQ
Trigger: CTGACCCGCAGGCTGTGACAATGCCTGCCACTGAGA...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGAGGCTATGGGACCCCTaGAAGCCCTGCGGGCCATTG +
Preference number: 5 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQRLWDP*KPCGPL
Trigger: CAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCT...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCCAGCCAACCGAGTCCTaGATGCCCTGCGGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLQPTES*MPCGPK
Trigger: TTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTG...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGTCAGCTTCGTCCCAGTaGCAGGGCCCGGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQSASSQ*QGPAAF
Trigger: GAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTGA...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGAGCCTCTGGGGTCTTaGAGACCTCTGTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGEPLGS*RPLWPL
Trigger: CAAAGGCCACAGAGGTCTCAAAGACCCCAGAGGCTC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCAAGCCCTGCGGGCCATaGAGGCCATTAGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLKPCGP*RPLGPL
Trigger: CAAAGGCCCTAATGGCCTCAATGGCCCGCAGGGCTT...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGGCTATGGGACCCCTaGAAGCCCTGCGGGCCATTG +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINRLWDP*KPCGPL
Trigger: CAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGCTCTACGGCGAGCCTaGCCCCTACGGGCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINALRRA*PLRALG
Trigger: ACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTGGGATGACTGGAGCTaGGCAGCTCTACGGCGAGCC +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINWDDWS*AALRRA
Trigger: GGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp CATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCCAGCATGTCCGAGCGCTaGATGGGAATCTTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: HHSPTWAFLESSSSSSQPSMSER*MGIFVW
Trigger: CCAGACGAAGATTCCCATCAAGCGCTCGGACATGCT...GGGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCAGCTTCGTCCCAGTaGCAGGGCCCGGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSASSQ*QGPAAF
Trigger: GAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGCCTGGATCCGGGCTTaGGCCCAGGGTCCGATATCA +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINAWIRA*AQGPIS
Trigger: TGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp CATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCCGGCACTGCCACTCTCTaGGGCTTTGGCTTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: HHSPTWAFLESSSSSSQPGTATL*GFGFSF
Trigger: GAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGCC...GGGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS CCA 90 bp TCCAGTGCCTTTGAGGCCTTCGGTGTCTCTGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTCTGCATCATCGAGCTACTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: SSAFEAFGVSGTSTF*VTVNRVCIIELLSF
Trigger: AAAGGACAGTAGCTCGATGATGCAGACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCCTCAAAGGCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000218439.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
CDS CCA 90 bp TCTGTGGCCTTTGAGGCCTTCGGTGTCTCTGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTCTGCATCATCGAGCTACTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: SVAFEAFGVSGTSTF*VTVNRVCIIELLSF
Trigger: AAAGGACAGTAGCTCGATGATGCAGACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCCTCAAAGGCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCTCAGTGGCAGGCATaGTCACAGCCTGCGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSQWQA*SQPAGQ
Trigger: CTGACCCGCAGGCTGTGACAATGCCTGCCACTGAGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCACCTTTCGGGCTTTCTaGGCTTTGACCTTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGTFRAF*ALTLGR
Trigger: TCGGCCCAAGGTCAAAGCCAAGAAAGCCCGAAAGGT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGGCCATTAGGGCCTTaGAGACCCTTCGGCCACCTG +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINRPLGP*RPFGHL
Trigger: CAGGTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGGCTATGGGACCCCTaGAAGCCCTGCGGGCCATTG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNRLWDP*KPCGPL
Trigger: CAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCAGCCAACCGAGTCCTaGATGCCCTGCGGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNQPTES*MPCGPK
Trigger: TTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCATCATTTGCCCTCCCTaGCAAAAGGGCCACATCCCG +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGIICPP*QKGHIP
Trigger: CGGGATGTGGCCCTTTTGCAAGGGAGGGCAAATGAT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGCATGTCCGAGCGCTaGATGGGAATCTTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSMSER*MGIFVW
Trigger: CCAGACGAAGATTCCCATCAAGCGCTCGGACATGCT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCAGCTTCGTCCCAGTaGCAGGGCCCGGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSASSQ*QGPAAF
Trigger: GAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATGCACCCTGGCTaGAAGAGAAAGACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGRMHPG*KRKTGR
Trigger: CCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCTCTACGGCGAGCCTTaGAGACCCTTCGGCCACCTG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNLYGEP*RPFGHL
Trigger: CAGGTGGCCGAAGGGTCTCAAAGGCTCGCCGTAGAG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375060.5
CDS GCA 90 bp GGTGTCTCTGGGACCTCCACATTCTGGGTCACTGTCAACAGAGTCTaGATCATCGAGCTACTGTCCTTTTCTGAAGCTTCAGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GVSGTSTFWVTVNRV*IIELLSFSEASAWK
Trigger: CTTCCAGGCTGAAGCTTCAGAAAAGGACAGTAGCTCGATGATGCAGACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCCAGAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
ENST00000627068.2
CDS GCA 90 bp AGCTGCAGCCTTCAAATCCGCTTCCATCGCCTCTCGGTACTGAGCTaGCCATTCCTTGGGATCCTTCTTTTGTACCTTGCAGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: SCSLQIRFHRLSVLS*PFLGILLLYLAGKL
Trigger: AAGTTTGCCTGCAAGGTACAAAAGAAGGATCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGATGGAAGCGGATTTGAAGGCTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGACCTCCAGTGCCTTaGAGGCCTTCGGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINRPPVP*RPSVSL
Trigger: CAGAGACACCGAAGGCCTCAAAGGCACTGGAGGTCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGACCCCAGAGGCTTTaGAGACCTTCACATCCTCTG +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGRPQRL*RPSHPL
Trigger: CAGAGGATGTGAAGGTCTCAAAAGCCTCTGGGGTCT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGGCCATTAGGGCCTTaGAGACCCTTCGGCCACCTG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNRPLGP*RPFGHL
Trigger: CAGGTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GGAATAAAATGCCAAAAGCAGTGTCTTGGCACACTCTCCACATCATTCTCCAACGCTCTACGGCGAGCCTaGCCCCTACGGGCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: GIKCQKQCLGTLSTSFSNALRRA*PLRALG
Trigger: ACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGC...GTTGGAGAATGATGTGGAGAGTGTGCCAAGACACTGCTTTTGGCATTTTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTGGGATGACTGGAGCTaGGCAGCTCTACGGCGAGCC +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIWDDWS*AALRRA
Trigger: GGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGCCTGGATCCGGGCTTaGGCCCAGGGTCCGATATCA +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIAWIRA*AQGPIS
Trigger: TGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCCACTCTCTTGGGCTTaGGCTTTAGCTTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQPLSWA*ALASAP
Trigger: GGGAGCAGAAGCTAAAGCCAAAGCCCAAGAGAGTGG...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp ACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCGCACTGGCACTGTTATaGGTACTGGTACTGGCACCA +
Preference number: 5 (lower is better)
Translates to: TSFSNLGLPRIIQLLIPAALALL*VLVLAP
Trigger: TGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGC...GGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCGCACTGGCACTGTTATaGGTACTGGTACTGGCACCA +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGALALL*VLVLAP
Trigger: TGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGC...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp CTTGGCACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGAGGATGCACCCTGGCTaGAAGAGAAAGACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LGTLSTSFSNLGLPRIIQRMHPG*KRKTGR
Trigger: CCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCT...CTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGLHHSR*CQTCLN
Trigger: ATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAGACCTCTGTGGCCTTaGAGACCCCAGAGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINRPLWP*RPQRLL
Trigger: CAAAAGCCTCTGGGGTCTCAAAGGCCACAGAGGTCT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTCAGCTGCTAGACTCTaGTTTTCAGCTGCCAGAACC +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSAARL*FSAART
Trigger: GGTTCTGGCAGCTGAAAACAAGAGTCTAGCAGCTGA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTCTCAGTGGCAGGCATaGTCACAGCCTGCGGGTCAG +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISQWQA*SQPAGQ
Trigger: CTGACCCGCAGGCTGTGACAATGCCTGCCACTGAGA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCACATGGCTGACCTTTTaGGTCTCAGTGGCAGGCATT +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGTWLTF*VSVAGI
Trigger: AATGCCTGCCACTGAGACCAAAAAGGTCAGCCATGT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCAAGCCCTGCGGGCCATaGAGGCCATTAGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIKPCGP*RPLGPL
Trigger: CAAAGGCCCTAATGGCCTCAATGGCCCGCAGGGCTT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACATCATTTGCCCTCCCTaGCAAAAGGGCCACATCCCG +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINIICPP*QKGHIP
Trigger: CGGGATGTGGCCCTTTTGCAAGGGAGGGCAAATGAT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTCATATTCAGGGGGATaGCTATTGGGGACTCTGGCA +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSYSGG*LLGTLA
Trigger: TGCCAGAGTCCCCAATAGCAATCCCCCTGAATATGA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGGCACTGCCACTCTCTaGGGCTTTGGCTTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINGTATL*GFGFSF
Trigger: GAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGCC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCAGACCTCCAGTGCCTTaGAGGCCTTCGGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIRPPVP*RPSVSL
Trigger: CAGAGACACCGAAGGCCTCAAAGGCACTGGAGGTCT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCGAGCCTCTGGGGTCTTaGAGACCTCTGTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIEPLGS*RPLWPL
Trigger: CAAAGGCCACAGAGGTCTCAAAGACCCCAGAGGCTC...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTCAGCATTCTGTTTCTaGGTGTCAGCTGCTAGACTC +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSAFCF*VSAARL
Trigger: GAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATACCTTTCGGGCTTTCTaGGCTTTGACCTTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNTFRAF*ALTLGR
Trigger: TCGGCCCAAGGTCAAAGCCAAGAAAGCCCGAAAGGT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCATTTGCCCTCCCTaGCAAAAGGGCCACATCCCG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNIICPP*QKGHIP
Trigger: CGGGATGTGGCCCTTTTGCAAGGGAGGGCAAATGAT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCACTTCACCAAATCATTaGCCCTCCCTTGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGTSPNH*PSLAKG
Trigger: CCCTTTTGCAAGGGAGGGCAAATGATTTGGTGAAGT...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGCATGTCCGAGCGCTaGATGGGAATCTTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSMSER*MGIFVW
Trigger: CCAGACGAAGATTCCCATCAAGCGCTCGGACATGCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACATGAGCAGACCCAGCTaGGGTGAGTCCTTAGTCGTT +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINMSRPS*GESLVV
Trigger: AACGACTAAGGACTCACCCAAGCTGGGTCTGCTCAT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCATCATATTCAGGGGGATaGCTATTGGGGACTCTGGCA +
Preference number: 5 (lower is better)
Translates to: STSFSNLGLPRIIQLLIPSYSGG*LLGTLA
Trigger: TGCCAGAGTCCCCAATAGCAATCCCCCTGAATATGA...TGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCCACTCTCTTGGGCTTaGGCTTTAGCTTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNPLSWA*ALASAP
Trigger: GGGAGCAGAAGCTAAAGCCAAAGCCCAAGAGAGTGG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATGGCACTGCCACTCTCTaGGGCTTTGGCTTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNGTATL*GFGFSF
Trigger: GAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGCC...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACGCACTGGCACTGTTATaGGTACTGGTACTGGCACCA +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINALALL*VLVLAP
Trigger: TGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGC...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp CATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCAGCCCACATCATTCTCCAACTaGGGCCTTCCTAGAATCATC +
Preference number: 5 (lower is better)
Translates to: HHSPTWAFLESSSSSSQPTSFSN*GLPRII
Trigger: GATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGT...GGGCTGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGGATGCACCCTGGCTaGAAGAGAAAGACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNRMHPG*KRKTGR
Trigger: CCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATAGACCCCAGAGGCTTTaGAGACCTTCACATCCTCTG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNRPQRL*RPSHPL
Trigger: CAGAGGATGTGAAGGTCTCAAAAGCCTCTGGGGTCT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375058.5
ENST00000375068.6
CDS-3UTR CAA 90 bp ACACTCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCTCAGCATTCTGTTTCTaGGTGTCAGCTGCTAGACTC +
Preference number: 5 (lower is better)
Translates to: TLSTSFSNLGLPRIIQLLSAFCF*VSAARL
Trigger: GAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGA...GAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCACCTTTCGGGCTTTCTaGGCTTTGACCTTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNITFRAF*ALTLGR
Trigger: TCGGCCCAAGGTCAAAGCCAAGAAAGCCCGAAAGGT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TCTCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCACTTCACCAAATCATTaGCCCTCCCTTGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SPHHSPTWAFLESSSSSSTSPNH*PSLAKG
Trigger: CCCTTTTGCAAGGGAGGGCAAATGATTTGGTGAAGT...GGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATGAGCAGACCCAGCTaGGGTGAGTCCTTAGTCGTT +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNMSRPS*GESLVV
Trigger: AACGACTAAGGACTCACCCAAGCTGGGTCTGCTCAT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCTCCTTCTTTTGTACCTaGCAGGCAAACTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGSFFCT*QANLRT
Trigger: AGTCCTCAAGTTTGCCTGCAAGGTACAAAAGAAGGA...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp GCTGTGTTGAGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCCTTGGGATCCTTCTTTaGTACCTTGCAGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: AVLSRFLRMHPGLKRKTGLGILL*YLAGKL
Trigger: AAGTTTGCCTGCAAGGTACAAAAGAAGGATCCCAAG...GCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACTCAACACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCCACTCTCTTGGGCTTaGGCTTTAGCTTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIPLSWA*ALASAP
Trigger: GGGAGCAGAAGCTAAAGCCAAAGCCCAAGAGAGTGG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCAGGATGCACCCTGGCTaGAAGAGAAAGACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIRMHPG*KRKTGR
Trigger: CCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCAGACATGTCTCAATTaGGCCTGGCAAGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIQTCLN*AWQELS
Trigger: GCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNLHHSR*CQTCLN
Trigger: ATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAG...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCAGCTGCTAGACTCTaGTTTTCAGCTGCCAGAACC +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSAARL*FSAART
Trigger: GGTTCTGGCAGCTGAAAACAAGAGTCTAGCAGCTGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACTCAGCATTCTGTTTCTaGGTGTCAGCTGCTAGACTC +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINSAFCF*VSAARL
Trigger: GAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGA...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATACATGGCTGACCTTTTaGGTCTCAGTGGCAGGCATT +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNTWLTF*VSVAGI
Trigger: AATGCCTGCCACTGAGACCAAAAAGGTCAGCCATGT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGTAGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACACTTCACCAAATCATTaGCCCTCCCTTGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SRFLRMHPGLKRKTGRINTSPNH*PSLAKG
Trigger: CCCTTTTGCAAGGGAGGGCAAATGATTTGGTGAAGT...GTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCATGAGCAGACCCAGCTaGGGTGAGTCCTTAGTCGTT +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNIMSRPS*GESLVV
Trigger: AACGACTAAGGACTCACCCAAGCTGGGTCTGCTCAT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCATATTCAGGGGGATaGCTATTGGGGACTCTGGCA +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSYSGG*LLGTLA
Trigger: TGCCAGAGTCCCCAATAGCAATCCCCCTGAATATGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TCCACATCATTCTCCAACTTGGGCCTTCCTAGAATCATCCAGCTCCTCATCCCACTTGGGATCCTTCTTTaGTACCTTGCAGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: STSFSNLGLPRIIQLLIPLGILL*YLAGKL
Trigger: AAGTTTGCCTGCAAGGTACAAAAGAAGGATCCCAAG...TGGGATGAGGAGCTGGATGATTCTAGGAAGGCCCAAGTTGGAGAATGATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347546.8
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTCAGCTGCTAGACTCTaGTTTTCAGCTGCCAGAACC +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISAARL*FSAART
Trigger: GGTTCTGGCAGCTGAAAACAAGAGTCTAGCAGCTGA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATTCAGCATTCTGTTTCTaGGTGTCAGCTGCTAGACTC +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNSAFCF*VSAARL
Trigger: GAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGA...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCACATGGCTGACCTTTTaGGTCTCAGTGGCAGGCATT +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNITWLTF*VSVAGI
Trigger: AATGCCTGCCACTGAGACCAAAAAGGTCAGCCATGT...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp AGGTTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATACTTCACCAAATCATTaGCCCTCCCTTGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: RFLRMHPGLKRKTGRINNTSPNH*PSLAKG
Trigger: CCCTTTTGCAAGGGAGGGCAAATGATTTGGTGAAGT...ATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTCATATTCAGGGGGATaGCTATTGGGGACTCTGGCA +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISYSGG*LLGTLA
Trigger: TGCCAGAGTCCCCAATAGCAATCCCCCTGAATATGA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCTCCTTCTTTTGTACCTaGCAGGCAAACTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNISFFCT*QANLRT
Trigger: AGTCCTCAAGTTTGCCTGCAAGGTACAAAAGAAGGA...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS-3UTR CAA 90 bp TTTCTGAGGATGCACCCTGGCTTGAAGAGAAAGACTGGCAGGATTAACAATATCCTTGGGATCCTTCTTTaGTACCTTGCAGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: FLRMHPGLKRKTGRINNILGILL*YLAGKL
Trigger: AAGTTTGCCTGCAAGGTACAAAAGAAGGATCCCAAG...GATATTGTTAATCCTGCCAGTCTTTCTCTTCAAGCCAGGGTGCATCCTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347546.8
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
CDS CAA 72 bp GCAAGGCTCTCCGGGCCCAAGCAGCCAACCGAGTCCTaGATGCCCTGCGGGCCCAAAAGGCTATGGGACCCC +
Preference number: 6 (lower is better)
Translates to: ARLSGPKQPTES*MPCGPKRLWDP
Trigger: GGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTGCTTGGGCCCGGAGAGCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS TCA 72 bp CAAGGCTCTCCGGGCCCAAGCAGCCAACCGAGTCCTTaGTGCCCTGCGGGCCCAAAAGGCTATGGGACCCCT +
Preference number: 6 (lower is better)
Translates to: QGSPGPSSQPSP*CPAGPKGYGTP
Trigger: AGGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTGCTTGGGCCCGGAGAGCCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 90 bp TCAGGGAGAGCAAGGCTCTCCGGGCCCAAGCAGCCAACCGAGTCCTaGATGCCCTGCGGGCCCAAAAGGCTATGGGACCCCTTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: SGRARLSGPKQPTES*MPCGPKRLWDPLKP
Trigger: GGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTGCTTGGGCCCGGAGAGCCTTGCTCTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS TCA 72 bp AGCTCTACGGCGAGCCTTGCCCCTACGGGCTTTAGGTaGTCTCAGGGAGAGCAAGGCTCTCCGGGCCCAAGC +
Preference number: 6 (lower is better)
Translates to: SSTASLAPTGFR*SQGEQGSPGPS
Trigger: GCTTGGGCCCGGAGAGCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS GCA 72 bp CTTTGGCCCAGGGTCCGATATCAGCTTCGTCCCAGTTaGAGGGCCCGGCAGCATTCTCCGAGCCGAGCCCAA +
Preference number: 6 (lower is better)
Translates to: LWPRVRYQLRPS*RARQHSPSRAQ
Trigger: TTGGGCTCGGCTCGGAGAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTGATATCGGACCCTGGGCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS GCA 72 bp GGCACTGCCACTCTCTTGGGCTTTGGCTTTAGCTTCTaGTCCCGCCTGGATCCGGGCTTTGGCCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: GTATLLGFGFSF*SRLDPGFGPGS
Trigger: GGACCCTGGGCCAAAGCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CCA 72 bp CTGGGCAGCTGCACTCTCAGGCTCAGGTTCATCTGCTaGGGCCTGAGAGGGTGCAGCCTCAGTCTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: LGSCTLRLRFIC*GLRGCSLSLLS
Trigger: GCTCAGGAGACTGAGGCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCTGAGAGTGCAGCTGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000497484.1
ENST00000627068.2
CDS CCA 72 bp ACCGAGTCCTTGATGCCCTGCGGGCCCAAAAGGCTATaGGACCCCTTGAAGCCCTGCGGGCCATTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: TESLMPCGPKRL*DPLKPCGPLRP
Trigger: TGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 72 bp AGGGCCACATCCCGAGGTGGTGGTGCTTCAGGCTCTTaGGATGACTGGAGCTTGGCAGCTCTACGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RATSRGGGASGS*DDWSLAALRRA
Trigger: GGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
ENST00000627068.2
CDS CAA 72 bp GGTGGTGGTGCTTCAGGCTCTTGGGATGACTGGAGCTaGGCAGCTCTACGGCGAGCCTTGCCCCTACGGGCT +
Preference number: 6 (lower is better)
Translates to: GGGASGSWDDWS*AALRRALPLRA
Trigger: AGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 90 bp TGGATCCGGGCTTTGGCCCAGGGTCCGATATCAGCTTCGTCCCAGTaGCAGGGCCCGGCAGCATTCTCCGAGCCGAGCCCAATGCCCATT +
Preference number: 6 (lower is better)
Translates to: WIRALAQGPISASSQ*QGPAAFSEPSPMPI
Trigger: AATGGGCATTGGGCTCGGCTCGGAGAATGCTGCCGGGCCCTGCAACTGGGACGAAGCTGATATCGGACCCTGGGCCAAAGCCCGGATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CAA 90 bp TGCGGGCCCAAAAGGCTATGGGACCCCTTGAAGCCCTGCGGGCCATaGAGGCCATTAGGGCCTTTGAGACCCTTCGGCCACCTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: CGPKRLWDPLKPCGP*RPLGPLRPFGHLWF
Trigger: GAACCACAGGTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 90 bp ACCGAGTCCTTGATGCCCTGCGGGCCCAAAAGGCTATGGGACCCCTaGAAGCCCTGCGGGCCATTGAGGCCATTAGGGCCTTTGAGACCC +
Preference number: 6 (lower is better)
Translates to: TESLMPCGPKRLWDP*KPCGPLRPLGPLRP
Trigger: GGGTCTCAAAGGCCCTAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 90 bp TCTTGGGCTTTGGCTTTAGCTTCTGCTCCCGCCTGGATCCGGGCTTaGGCCCAGGGTCCGATATCAGCTTCGTCCCAGTTGCAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: SWALALASAPAWIRA*AQGPISASSQLQGP
Trigger: CGGGCCCTGCAACTGGGACGAAGCTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAAAGCCCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS TCA 72 bp CACATCCCGAGGTGGTGGTGCTTCAGGCTCTTGGGATaGCTGGAGCTTGGCAGCTCTACGGCGAGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: HIPRWWCFRLLG*LELGSSTASLA
Trigger: GGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 72 bp GTGGTGGTGCTTCAGGCTCTTGGGATGACTGGAGCTTaGCAGCTCTACGGCGAGCCTTGCCCCTACGGGCTT +
Preference number: 6 (lower is better)
Translates to: VVVLQALGMTGA*QLYGEPCPYGL
Trigger: AAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 72 bp TTGATGCCCTGCGGGCCCAAAAGGCTATGGGACCCCTaGAAGCCCTGCGGGCCATTGAGGCCATTAGGGCCT +
Preference number: 6 (lower is better)
Translates to: LMPCGPKRLWDP*KPCGPLRPLGP
Trigger: AGGCCCTAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS GCA 72 bp GGGCCGAGTATCCTGATTCTCCTGAGACTGGGCAGCTaGACTCTCAGGCTCAGGTTCATCTGCTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GPSILILLRLGS*TLRLRFICWGL
Trigger: CAGGCCCCAGCAGATGAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAGGAGAATCAGGATACTCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
ENST00000627068.2
CDS CCA 72 bp GTGGTGGTGCTTCAGGCTCTTGGGATGACTGGAGCTTaGCAGCTCTACGGCGAGCCTTTGAGACCCTTCGGC +
Preference number: 6 (lower is better)
Translates to: VVVLQALGMTGA*QLYGEPLRPFG
Trigger: GCCGAAGGGTCTCAAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375060.5
ENST00000627068.2
CDS CAA 72 bp TGGGATGACTGGAGCTTGGCAGCTCTACGGCGAGCCTaGCCCCTACGGGCTTTAGGTGATCTCAGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: WDDWSLAALRRA*PLRALGDLRES
Trigger: GCTCTCCCTGAGATCACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 72 bp GGTGGTGGTGCTTCAGGCTCTTGGGATGACTGGAGCTaGGCAGCTCTACGGCGAGCCTTTGAGACCCTTCGG +
Preference number: 6 (lower is better)
Translates to: GGGASGSWDDWS*AALRRAFETLR
Trigger: CCGAAGGGTCTCAAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375060.5
ENST00000627068.2
CDS CAA 90 bp TGGGACCCCTTGAAGCCCTGCGGGCCATTGAGGCCATTAGGGCCTTaGAGACCCTTCGGCCACCTGTGGTTCCAGAAGCCTGACTCTGAT +
Preference number: 6 (lower is better)
Translates to: WDPLKPCGPLRPLGP*RPFGHLWFQKPDSD
Trigger: ATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 90 bp TCAGGCTCTTGGGATGACTGGAGCTTGGCAGCTCTACGGCGAGCCTaGCCCCTACGGGCTTTAGGTGATCTCAGGGAGAGCAAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SGSWDDWSLAALRRA*PLRALGDLRESKAL
Trigger: GAGAGCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 90 bp ACATCCCGAGGTGGTGGTGCTTCAGGCTCTTGGGATGACTGGAGCTaGGCAGCTCTACGGCGAGCCTTGCCCCTACGGGCTTTAGGTGAT +
Preference number: 6 (lower is better)
Translates to: TSRGGGASGSWDDWS*AALRRALPLRALGD
Trigger: ATCACCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 90 bp GAGCCGAGCCCAATGCCCATTCGAGCTCTAATCTCGGCCCTAGCCTaGGCTTCAGCTGCAGCCTCAGCTGCAGCCTTCAAATCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: EPSPMPIRALISALA*ASAAASAAAFKSAS
Trigger: GGAAGCGGATTTGAAGGCTGCAGCTGAGGCTGCAGCTGAAGCCAAGGCTAGGGCCGAGATTAGAGCTCGAATGGGCATTGGGCTCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS TCA 72 bp CCACTGAACGTCCTCTCCCCTGTTGTGCCTGGAGGCTaGTCCTCACCTTCCGTAGGTCCCCAATTCCAACCC +
Preference number: 6 (lower is better)
Translates to: PLNVLSPVVPGG*SSPSVGPQFQP
Trigger: GGGTTGGAATTGGGGACCTACGGAAGGTGAGGATCAGCCTCCAGGCACAACAGGGGAGAGGACGTTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485483.1
CDS TCA 72 bp GAGCTGAGCCTGAAGGGGAGAAGGCCTGGGTCAAGTTaGAGCCCACTGAACGTCCTCTCCCCTGTTGTGCCT +
Preference number: 6 (lower is better)
Translates to: ELSLKGRRPGSS*SPLNVLSPVVP
Trigger: AGGCACAACAGGGGAGAGGACGTTCAGTGGGCTTCAACTTGACCCAGGCCTTCTCCCCTTCAGGCTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485483.1
CDS GCA 72 bp GCAAGAGCTGAGCCTCGTCCTCCTACAATTCCCGAGTaGGTCCACTCACTCCAAGCCCCTCCGAAACTCGGA +
Preference number: 6 (lower is better)
Translates to: ARAEPRPPTIPE*VHSLQAPPKLG
Trigger: TCCGAGTTTCGGAGGGGCTTGGAGTGAGTGGACGCACTCGGGAATTGTAGGAGGACGAGGCTCAGCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218439.8
ENST00000375058.5
ENST00000375060.5
CDS CCA 72 bp CTCTCTTGGGCTTTGGCTTTAGCTTCTGCTCCCGCCTaGATCCGGGCTTTGGCCCAGGGTCCGATATCAGCT +
Preference number: 6 (lower is better)
Translates to: LSWALALASAPA*IRALAQGPISA
Trigger: AGCTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAAAGCCCAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CCA 72 bp CACCACTGGTGCTGGCACTGGCACTGGCACTGTTATTaGTACTGGTACTGGCACCAGTGCTGGCACTGCCAC +
Preference number: 6 (lower is better)
Translates to: HHWCWHWHWHCY*YWYWHQCWHCH
Trigger: GTGGCAGTGCCAGCACTGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CAA 72 bp TTGAAGCCCTGCGGGCCATTGAGGCCATTAGGGCCTTaGAGACCCTTCGGCCACCTGTGGTTCCAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: LKPCGPLRPLGP*RPFGHLWFQKP
Trigger: AGGCTTCTGGAACCACAGGTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCTCAATGGCCCGCAGGGCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 72 bp AAAAGGCTATGGGACCCCTTGAAGCCCTGCGGGCCATaGAGGCCATTAGGGCCTTTGAGACCCTTCGGCCAC +
Preference number: 6 (lower is better)
Translates to: KRLWDPLKPCGP*RPLGPLRPFGH
Trigger: GTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CAA 72 bp TTGGCTTTAGCTTCTGCTCCCGCCTGGATCCGGGCTTaGGCCCAGGGTCCGATATCAGCTTCGTCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: LALASAPAWIRA*AQGPISASSQL
Trigger: CAACTGGGACGAAGCTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CAA 72 bp CCACCACTGGTGCTGGCACTGGCACTGGCACTGTTATaGGTACTGGTACTGGCACCAGTGCTGGCACTGCCA +
Preference number: 6 (lower is better)
Translates to: PPLVLALALALL*VLVLAPVLALP
Trigger: TGGCAGTGCCAGCACTGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CAA 72 bp AGAGCTGAGCCTGAAGGGGAGAAGGCCTGGGTCAAGTaGAAGCCCACTGAACGTCCTCTCCCCTGTTGTGCC +
Preference number: 6 (lower is better)
Translates to: RAEPEGEKAWVK*KPTERPLPCCA
Trigger: GGCACAACAGGGGAGAGGACGTTCAGTGGGCTTCAACTTGACCCAGGCCTTCTCCCCTTCAGGCTCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485483.1
CDS CAA 90 bp GCACTGAAGCCACCACTGGTGCTGGCACTGGCACTGGCACTGTTATaGGTACTGGTACTGGCACCAGTGCTGGCACTGCCACTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: ALKPPLVLALALALL*VLVLAPVLALPLSW
Trigger: CCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGCCAGTGCCAGCACCAGTGGTGGCTTCAGTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CCA 72 bp CTCTACGGCGAGCCTTTGAGACCCTTCGGCCACCTGTaGTTCCAGAAGCCTGACTCTGATCACTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: LYGEPLRPFGHL*FQKPDSDHCCH
Trigger: ATGGCAGCAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGGTCTCAAAGGCTCGCCGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375060.5
ENST00000627068.2
CDS GCA 72 bp CTCAGGCTCAGGTTCATCTGCTGGGGCCTGAGAGGGTaGAGCCTCAGTCTCCTGAGCCTTTGTATTGACCTT +
Preference number: 6 (lower is better)
Translates to: LRLRFICWGLRG*SLSLLSLCIDL
Trigger: AAGGTCAATACAAAGGCTCAGGAGACTGAGGCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000497484.1
ENST00000627068.2
CDS GCA 72 bp GGCCACCTGTGGTTCCAGAAGCCTGACTCTGATCACTaGTGCCATCCTCTTCCCCATCCAGATGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: GHLWFQKPDSDH*CHPLPHPDASP
Trigger: AGGTGAAGCATCTGGATGGGGAAGAGGATGGCAGCAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
ENST00000627068.2
CDS CCA 72 bp AGGCCATTAGGGCCTTTGAGACCCTTCGGCCACCTGTaGTTCCAGAAGCCTGACTCTGATCACTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: RPLGPLRPFGHL*FQKPDSDHCCH
Trigger: ATGGCAGCAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGGTCTCAAAGGCCCTAATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000463787.5
ENST00000497484.1
CDS CCA 72 bp TGGCACTGGCACTGGCACTGTTATTGGTACTGGTACTaGCACCAGTGCTGGCACTGCCACTCTCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: WHWHWHCYWYWY*HQCWHCHSLGL
Trigger: AAGCCCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGCCAGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CCA 72 bp TGGTGCTGGCACTGGCACTGGCACTGTTATTGGTACTaGTACTGGCACCAGTGCTGGCACTGCCACTCTCTT +
Preference number: 6 (lower is better)
Translates to: WCWHWHWHCYWY*YWHQCWHCHSL
Trigger: AAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTACCAGTACCAATAACAGTGCCAGTGCCAGTGCCAGCACCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CCA 72 bp TTGAAGCCCACTGAACGTCCTCTCCCCTGTTGTGCCTaGAGGCTGATCCTCACCTTCCGTAGGTCCCCAATT +
Preference number: 6 (lower is better)
Translates to: LKPTERPLPCCA*RLILTFRRSPI
Trigger: AATTGGGGACCTACGGAAGGTGAGGATCAGCCTCCAGGCACAACAGGGGAGAGGACGTTCAGTGGGCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485483.1
CDS CCA 72 bp CACTCTCGCTTGTGTCAGACATGTCTCAATTTGGCCTaGCAAGAGCTGAGCCTGAAGGGGAGAAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: HSRLCQTCLNLA*QELSLKGRRPG
Trigger: CCCAGGCCTTCTCCCCTTCAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485483.1
CDS CAA 90 bp CAGAGGCTTTTGAGACCTTCACATCCTCTGAGACCTCCAGTGCCTTaGAGGCCTTCGGTGTCTCTGGGACCTCCACATTCTGGGTCACTG +
Preference number: 6 (lower is better)
Translates to: QRLLRPSHPLRPPVP*RPSVSLGPPHSGSL
Trigger: CAGTGACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCCTCAAAGGCACTGGAGGTCTCAGAGGATGTGAAGGTCTCAAAAGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218439.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
CDS CAA 90 bp CTGGGGTCTTTGAGACCTCTGTGGCCTTTGAGACCCCAGAGGCTTTaGAGACCTTCACATCCTCTGAGACCTCCAGTGCCTTTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: LGSLRPLWPLRPQRL*RPSHPLRPPVPLRP
Trigger: AGGCCTCAAAGGCACTGGAGGTCTCAGAGGATGTGAAGGTCTCAAAAGCCTCTGGGGTCTCAAAGGCCACAGAGGTCTCAAAGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000218439.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
CDS CAA 90 bp CATCTGCTGGGGCCTGGAAGCGAGTTAGACCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAATTTGGCCTGGCAAGAGCTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: HLLGPGSELDLHHSR*CQTCLNLAWQELSL
Trigger: AAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGCCCCAGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463787.5
CDS CCA 72 bp CACTCTCGCTTGTGTCAGACATGTCTCAATTTGGCCTaGCAAGAGCTGAGCCTTGTCCTCCAGCGAGTTCGG +
Preference number: 6 (lower is better)
Translates to: HSRLCQTCLNLA*QELSLVLQRVR
Trigger: CCGAACTCGCTGGAGGACAAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347546.8
ENST00000375053.6
ENST00000375068.6
ENST00000463787.5
ENST00000627068.2
CDS CAA 72 bp CTGCACCACTCTCGCTTGTGTCAGACATGTCTCAATTaGGCCTGGCAAGAGCTGAGCCTTGTCCTCCAGCGA +
Preference number: 6 (lower is better)
Translates to: LHHSRLCQTCLN*AWQELSLVLQR
Trigger: TCGCTGGAGGACAAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347546.8
ENST00000375053.6
ENST00000375068.6
ENST00000463787.5
ENST00000627068.2
CDS CAA 72 bp GGGCCTGGAAGCGAGTTAGACCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAATTTGGCCTGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: GPGSELDLHHSR*CQTCLNLAWQE
Trigger: CTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463787.5
CDS CAA 90 bp CTGAAGCTTCAGCCTGGAAGCGAGTTAGACCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAATTTGGCCTGGCAAGAGCTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: LKLQPGSELDLHHSR*CQTCLNLAWQELSL
Trigger: GAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGCTGAAGCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218439.8
ENST00000375058.5
ENST00000375060.5
CDS CAA 90 bp CTGAAGCTTCAGCCTGGAAGCGAGTTAGACCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAATTTGGCCTGGCAAGAGCTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: LKLQPGSELDLHHSR*CQTCLNLAWQELSL
Trigger: CAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGCTGAAGCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485483.1
CDS TCA 72 bp GCAGCCTTCAAATCCGCTTCCATCGCCTCTCGGTACTaGGCTGCCCATTCCTTGGGATCCTTCTTTTGTACC +
Preference number: 6 (lower is better)
Translates to: AAFKSASIASRY*AAHSLGSFFCT
Trigger: GGTACAAAAGAAGGATCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGATGGAAGCGGATTTGAAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CCA 72 bp CACTCTCGCTTGTGTCAGACATGTCTCAATTTGGCCTaGCAAGAGCTGAGCCTCGTCCTCCTACAATTCCCG +
Preference number: 6 (lower is better)
Translates to: HSRLCQTCLNLA*QELSLVLLQFP
Trigger: CGGGAATTGTAGGAGGACGAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218439.8
ENST00000375058.5
ENST00000375060.5
CDS CCA 72 bp GATGAGGCCTTCGGTGTCTCTGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTCTGCATCATCGAGCTA +
Preference number: 6 (lower is better)
Translates to: DEAFGVSGTSTF*VTVNRVCIIEL
Trigger: TAGCTCGATGATGCAGACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375060.5
ENST00000627068.2
CDS CAA 72 bp CTGCACCACTCTCGCTTGTGTCAGACATGTCTCAATTaGGCCTGGCAAGAGCTGAGCCTCGTCCTCCTACAA +
Preference number: 6 (lower is better)
Translates to: LHHSRLCQTCLN*AWQELSLVLLQ
Trigger: TTGTAGGAGGACGAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218439.8
ENST00000375058.5
ENST00000375060.5
CDS CAA 72 bp CAGCCTGGAAGCGAGTTAGACCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAATTTGGCCTGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: QPGSELDLHHSR*CQTCLNLAWQE
Trigger: CTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
ENST00000627068.2
CDS CAA 72 bp TTGAGACCTTCACATCCTCTGAGACCTCCAGTGCCTTaGAGGCCTTCGGTGTCTCTGGGACCTCCACATTCT +
Preference number: 6 (lower is better)
Translates to: LRPSHPLRPPVP*RPSVSLGPPHS
Trigger: AGAATGTGGAGGTCCCAGAGACACCGAAGGCCTCAAAGGCACTGGAGGTCTCAGAGGATGTGAAGGTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000218439.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
CDS CAA 72 bp TTGAGACCTCTGTGGCCTTTGAGACCCCAGAGGCTTTaGAGACCTTCACATCCTCTGAGACCTCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: LRPLWPLRPQRL*RPSHPLRPPVP
Trigger: AGGCACTGGAGGTCTCAGAGGATGTGAAGGTCTCAAAAGCCTCTGGGGTCTCAAAGGCCACAGAGGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218439.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
CDS CAA 90 bp TCAGTGGCAGGCATTGTCACAGCCTGCGGGTCAGCATTCTGTTTCTaGGTGTCAGCTGCTAGACTCTTGTTTTCAGCTGCCAGAACCTGG +
Preference number: 6 (lower is better)
Translates to: SVAGIVTACGSAFCF*VSAARLLFSAARTW
Trigger: CCAGGTTCTGGCAGCTGAAAACAAGAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGACCCGCAGGCTGTGACAATGCCTGCCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
ENST00000627068.2
CDS CAA 90 bp CTGAAGCTTCAGCCTGGAAGCGAGTTAGACCTGCACCACTCTCGCTaGTGTCAGACATGTCTCAATTTGGCCTGGCAAGAGCTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: LKLQPGSELDLHHSR*CQTCLNLAWQELSL
Trigger: AAGGCTCAGCTCTTGCCAGGCCAAATTGAGACATGTCTGACACAAGCGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGCTGAAGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347546.8
ENST00000375053.6
ENST00000375068.6
ENST00000396224.1
ENST00000497484.1
ENST00000627068.2
CDS CCA 72 bp TTTGAGGCCTTCGGTGTCTCTGGGACCTCCACATTCTaGGTCACTGTCAACAGAGTCTGCATCATCGAGCTA +
Preference number: 6 (lower is better)
Translates to: FEAFGVSGTSTF*VTVNRVCIIEL
Trigger: TAGCTCGATGATGCAGACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
CDS CAA 72 bp GGCATTGTCACAGCCTGCGGGTCAGCATTCTGTTTCTaGGTGTCAGCTGCTAGACTCTTGTTTTCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GIVTACGSAFCF*VSAARLLFSAA
Trigger: GGCAGCTGAAAACAAGAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGACCCGCAGGCTGTGACAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
ENST00000627068.2
CDS CAA 72 bp GTATTGACCTTTGTATCAGCCACATGGCTGACCTTTTaGGTCTCAGTGGCAGGCATTGTCACAGCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: VLTFVSATWLTF*VSVAGIVTACG
Trigger: CCCGCAGGCTGTGACAATGCCTGCCACTGAGACCAAAAAGGTCAGCCATGTGGCTGATACAAAGGTCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
ENST00000627068.2
CDS GCA 72 bp CTTCAAATCCGCTTCCATCGCCTCTCGGTACTGAGCTaGCCATTCCTTGGGATCCTTCTTTTGTACCTTGCA +
Preference number: 6 (lower is better)
Translates to: LQIRFHRLSVLS*PFLGILLLYLA
Trigger: TGCAAGGTACAAAAGAAGGATCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGATGGAAGCGGATTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000627068.2
CDS CAA 72 bp AAGATGATGCTAAGAAGCACCATGAGCAGACCCAGCTaGGGTGAGTCCTTAGTCGTTCCCAGTATGCCTGCA +
Preference number: 6 (lower is better)
Translates to: KMMLRSTMSRPS*GESLVVPSMPA
Trigger: TGCAGGCATACTGGGAACGACTAAGGACTCACCCAAGCTGGGTCTGCTCATGGTGCTTCTTAGCATCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000487463.1
ENST00000487482.5
ENST00000627068.2
CDS CAA 72 bp TCAGCATTCTGTTTCTTGGTGTCAGCTGCTAGACTCTaGTTTTCAGCTGCCAGAACCTGGGTATCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: SAFCFLVSAARL*FSAARTWVSVS
Trigger: GCTGACTGATACCCAGGTTCTGGCAGCTGAAAACAAGAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000485483.1
ENST00000497484.1
ENST00000627068.2
CDS TCA 72 bp TTCCCAGTATGCCTGCATCAGTGGGCTCTAAGGTGCTaGGAAGAATGTACAAGTGGTCATTCTTATCAATTT +
Preference number: 6 (lower is better)
Translates to: FPVCLHQWALRC*EECTSGHSYQF
Trigger: AAATTGATAAGAATGACCACTTGTACATTCTTCTCAGCACCTTAGAGCCCACTGATGCAGGCATACTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000218439.8
ENST00000347546.8
ENST00000375053.6
ENST00000375058.5
ENST00000375060.5
ENST00000375068.6
ENST00000396224.1
ENST00000487463.1
ENST00000487482.5
ENST00000627068.2