RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYST (Homo sapiens)

Ensembl gene IDs: ENSG00000143669

Ensembl transcript IDs: ENST00000389793.7, ENST00000389794.7, ENST00000465349.5, ENST00000468107.5, ENST00000468626.2, ENST00000473037.5, ENST00000489585.5, ENST00000492844.1

Found 993 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGTGGGCAGAGCCTGGAGAGAGCCAAATCTTTCTCCGTGGGGCTaGCTGAAGCAGACCACAGGTACTGGAGCACTGGGGGAACCCACG +
Preference number: 1 (lower is better)
Translates to: LVGRAWREPNLSPWG*LKQTTGTGALGEPT
Trigger: CGTGGGTTCCCCCAGTGCTCCAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp TGGGCAGAGCCTGGAGAGAGCCAAATCTTTCTCCGTGGGGCTGGCTaGAGCAGACCACAGGTACTGGAGCACTGGGGGAACCCACGTATT +
Preference number: 1 (lower is better)
Translates to: WAEPGESQIFLRGAG*SRPQVLEHWGNPRI
Trigger: AATACGTGGGTTCCCCCAGTGCTCCAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp ATTGCTCTGGTGGGCAGAGCCTGGAGAGAGCCAAATCTTTCTCCGTaGGGCTGGCTGAAGCAGACCACAGGTACTGGAGCACTGGGGGAA +
Preference number: 1 (lower is better)
Translates to: IALVGRAWREPNLSP*GWLKQTTGTGALGE
Trigger: TTCCCCCAGTGCTCCAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCACCAGAGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TCAGGCTGGTTGGAGAAAGCCACGGAACAGATGATCTCCCTGCAGTaGACATGTCCAACGAGATCCCCGTTCACCGTCCAGAGTCTGAGG +
Preference number: 1 (lower is better)
Translates to: SGWLEKATEQMISLQ*TCPTRSPFTVQSLR
Trigger: CCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp CAGAAATTCCGTGACAAACCACAGATTGCTCTGGTGGGCAGAGCCTaGAGAGAGCCAAATCTTTCTCCGTGGGGCTGGCTGAAGCAGACC +
Preference number: 1 (lower is better)
Translates to: QKFRDKPQIALVGRA*REPNLSPWGWLKQT
Trigger: GGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCACGGAATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp ATCAGGTCGGCGTGGGCAGGACTCATCCCCAGGACTGTCATCTTCTaGCCTGGGTTCTGCTCCCAACTGTTTATGATCTGCTTTGACCAC +
Preference number: 1 (lower is better)
Translates to: IRSAWAGLIPRTVIF*PGFCSQLFMICFDH
Trigger: GTGGTCAAAGCAGATCATAAACAGTTGGGAGCAGAACCCAGGTCAGAAGATGACAGTCCTGGGGATGAGTCCTGCCCACGCCGACCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp AGCCATAGTGATAGGGCTGCACGGGAGGCATGGGGTCATCTTCTCTaGCTCCTTTGCGGTACTCTTCCTCCAAGTACTTGTATGTGTCCA +
Preference number: 1 (lower is better)
Translates to: SHSDRAAREAWGHLL*LLCGTLPPSTCMCP
Trigger: TGGACACATACAAGTACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGCCCTATCACTATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TATTGGAATAGTGGGAGCCATAGTGATAGGGCTGCACGGGAGGCATaGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGT +
Preference number: 1 (lower is better)
Translates to: YWNSGSHSDRAAREA*GHLLWLLCGTLPPS
Trigger: ACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGCCCTATCACTATGGCTCCCACTATTCCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TCATCAGAAGACAGAAATTCCGTGACAAACCACAGATTGCTCTGGTaGGCAGAGCCTGGAGAGAGCCAAATCTTTCTCCGTGGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: SSEDRNSVTNHRLLW*AEPGESQIFLRGAG
Trigger: GCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTTCTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TCGCATTCACCCGGCTGCATAGCTGCTAAGGAAGGAATAGAACATTaGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCAC +
Preference number: 1 (lower is better)
Translates to: SHSPGCIAAKEGIEH*LFQALLVLPTPGNH
Trigger: GTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGGTGAATGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp CCAGGACTGTCATCTTCTGACCTGGGTTCTGCTCCCAACTGTTTATaGTCTGCTTTGACCACTGGAAATCCCAGCACTCCCTTTGGGACA +
Preference number: 1 (lower is better)
Translates to: PGLSSSDLGSAPNCL*SALTTGNPSTPFGT
Trigger: TGTCCCAAAGGGAGTGCTGGGATTTCCAGTGGTCAAAGCAGATCATAAACAGTTGGGAGCAGAACCCAGGTCAGAAGATGACAGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp CCATGTGGAACAGCTGACGGGGAGTCTGCCCGTAGGTTTTTATCATaGTTTCTAGCGCTCGTCTCTGAACTGGATCTTCAACTGCAGAGA +
Preference number: 1 (lower is better)
Translates to: PCGTADGESARRFLS*FLALVSELDLQLQR
Trigger: TCTCTGCAGTTGAAGATCCAGTTCAGAGACGAGCGCTAGAAACCATGATAAAAACCTACGGGCAGACTCCCCGTCAGCTGTTCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp ATGTCATCAGAAGACAGAAATTCCGTGACAAACCACAGATTGCTCTaGTGGGCAGAGCCTGGAGAGAGCCAAATCTTTCTCCGTGGGGCT +
Preference number: 1 (lower is better)
Translates to: MSSEDRNSVTNHRLL*WAEPGESQIFLRGA
Trigger: AGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTTCTGATGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp CACACCTTGTTCCTTGCTATATGTCATCAGAAGACAGAAATTCCGTaGCAAACCACAGATTGCTCTGGTGGGCAGAGCCTGGAGAGAGCC +
Preference number: 1 (lower is better)
Translates to: HTLFLAICHQKTEIP*QTTDCSGGQSLERA
Trigger: GGCTCTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTTCTGATGACATATAGCAAGGAACAAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 90 bp CTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCACTGTTTaGTGTGTACAAATGGTGGCCATCACAAGAAAATGTAAGGCTGAT +
Preference number: 1 (lower is better)
Translates to: LLVLPTPGNHGPITV*CVQMVAITRKCKAD
Trigger: ATCAGCCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp ACTGGAAATCCCAGCACTCCCTTTGGGACATCACTGACAGAGACCTaGGCTGAGAGGACAGCTTCCATTTCACAAACAGTTTTTGCAGAC +
Preference number: 1 (lower is better)
Translates to: TGNPSTPFGTSLTET*AERTASISQTVFAD
Trigger: GTCTGCAAAAACTGTTTGTGAAATGGAAGCTGTCCTCTCAGCCCAGGTCTCTGTCAGTGATGTCCCAAAGGGAGTGCTGGGATTTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp ACGTCTCCTCTCTCGATTTGGCCCTTCTGTTGGATCCAACTGCCATaGGGTTGGATAGTAGATGGGGTCATACCATACTGCTCTATCATG +
Preference number: 1 (lower is better)
Translates to: TSPLSIWPFCWIQLP*GWIVDGVIPYCSIM
Trigger: CATGATAGAGCAGTATGGTATGACCCCATCTACTATCCAACCTCATGGCAGTTGGATCCAACAGAAGGGCCAAATCGAGAGAGGAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TTTTCTAATCCCCCAGCGATTACATTGATAGATACTCCCTCAGGCTaGTTGGAGAAAGCCACGGAACAGATGATCTCCCTGCAGTGGACA +
Preference number: 1 (lower is better)
Translates to: FSNPPAITLIDTPSG*LEKATEQMISLQWT
Trigger: TGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp GGAGCAGAAGGTGACTGGAGTGAATCTGTGAGGTTTTCAGAGTCATaGTTTGCGGTGGTCCTTATAAATTCCATAGCAGCCTGGAGAACT +
Preference number: 1 (lower is better)
Translates to: GAEGDWSESVRFSES*FAVVLINSIAAWRT
Trigger: AGTTCTCCAGGCTGCTATGGAATTTATAAGGACCACCGCAAATCATGACTCTGAAAACCTCACAGATTCACTCCAGTCACCTTCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp GCTTGGCTAGGGTTCTCTTGGCTCATTCTCCGTTGCATCATCACATaGAGCTCATCATTTGCCACTGAACGCATTTTCATCAGAAGCGAT +
Preference number: 1 (lower is better)
Translates to: AWLGFSWLILRCIIT*SSSFATERIFIRSD
Trigger: ATCGCTTCTGATGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATGTGATGATGCAACGGAGAATGAGCCAAGAGAACCCTAGCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 90 bp AAAATTTGCTTTCTCTCTTGTGCAGCGTGGGCTGGCGACAAAATATaGACTAGTAGTCTCCCAAGCTGCATTCGGAAGGTCTCCTTACAA +
Preference number: 1 (lower is better)
Translates to: KICFLSCAAWAGDKI*TSSLPSCIRKVSLQ
Trigger: TTGTAAGGAGACCTTCCGAATGCAGCTTGGGAGACTACTAGTGCATATTTTGTCGCCAGCCCACGCTGCACAAGAGAGAAAGCAAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp CGACACCAGGCAATCACGGTCCCATCACTGTTTGCTGTGTACAAATaGTGGCCATCACAAGAAAATGTAAGGCTGATGATGGGCTTATTT +
Preference number: 1 (lower is better)
Translates to: RHQAITVPSLFAVYK*WPSQENVRLMMGLF
Trigger: AAATAAGCCCATCATCAGCCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 90 bp TTAAAGTGCTTTGGAGAACGTGAAGTTCATTCGCATTCACCCGGCTaGATAGCTGCTAAGGAAGGAATAGAACATTGGCTGTTTCAAGCG +
Preference number: 1 (lower is better)
Translates to: LKCFGEREVHSHSPG*IAAKEGIEHWLFQA
Trigger: CGCTTGAAACAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGGTGAATGCGAATGAACTTCACGTTCTCCAAAGCACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp AGTGAAGAAGTAGGGAATGCTGGTAGGCTTCTAGAACGCAGCATATaGGCGGCCATCTGTTGTGGAATAATATTAGAGGAATTCTCTCCT +
Preference number: 1 (lower is better)
Translates to: SEEVGNAGRLLERSI*AAICCGIILEEFSP
Trigger: AGGAGAGAATTCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGCCTACCAGCATTCCCTACTTCTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp CACCAGGCAATCACGGTCCCATCACTGTTTGCTGTGTACAAATGGTaGCCATCACAAGAAAATGTAAGGCTGATGATGGGCTTATTTGAT +
Preference number: 1 (lower is better)
Translates to: HQAITVPSLFAVYKW*PSQENVRLMMGLFD
Trigger: ATCAAATAAGCCCATCATCAGCCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp GTGGGGATCAGCCCACACTTGGATCATCAACGCTTTGGATCCCAGTaGAATTATATGAATACATCCTTCTTCTATGAGTCTTTCACCAGG +
Preference number: 1 (lower is better)
Translates to: VGISPHLDHQRFGSQ*NYMNTSFFYESFTR
Trigger: CCTGGTGAAAGACTCATAGAAGAAGGATGTATTCATATAATTTCACTGGGATCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp GCTCATTCTCCGTTGCATCATCACATGAAGCTCATCATTTGCCACTaGACGCATTTTCATCAGAAGCGATTCAGTTTGAGCAAGGGGAAA +
Preference number: 1 (lower is better)
Translates to: AHSPLHHHMKLIICH*THFHQKRFSLSKGK
Trigger: TTTCCCCTTGCTCAAACTGAATCGCTTCTGATGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATGTGATGATGCAACGGAGAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp CTTAAAATATTATCAGCATATCCCCAGCTCAGGATGGCTGACCACTaGATGTCCGTACTGTTCATGCTTCTCACACCTTGTTCCTTGCTA +
Preference number: 1 (lower is better)
Translates to: LKILSAYPQLRMADH*MSVLFMLLTPCSLL
Trigger: TAGCAAGGAACAAGGTGTGAGAAGCATGAACAGTACGGACATTCAGTGGTCAGCCATCCTGAGCTGGGGATATGCTGATAATATTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTaGTTTGGAGAACGTGAAGTTCATTCGCATTCACCCGGCTGCATA +
Preference number: 1 (lower is better)
Translates to: PPKTGEVNKSSLELK*FGEREVHSHSPGCI
Trigger: TATGCAGCCGGGTGAATGCGAATGAACTTCACGTTCTCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TACTCTTCAACCTTAAAATATTATCAGCATATCCCCAGCTCAGGATaGCTGACCACTGAATGTCCGTACTGTTCATGCTTCTCACACCTT +
Preference number: 1 (lower is better)
Translates to: YSSTLKYYQHIPSSG*LTTECPYCSCFSHL
Trigger: AAGGTGTGAGAAGCATGAACAGTACGGACATTCAGTGGTCAGCCATCCTGAGCTGGGGATATGCTGATAATATTTTAAGGTTGAAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp CCAACGCTTGTGAACTTCTTTAATTTCTTCATATGTCCAGGAAAATaGTGCTGGTTCCAACTCTCCCTGAAGGCTCGAACTTTCAACTGT +
Preference number: 1 (lower is better)
Translates to: PTLVNFFNFFICPGK*CWFQLSLKARTFNC
Trigger: ACAGTTGAAAGTTCGAGCCTTCAGGGAGAGTTGGAACCAGCATCATTTTCCTGGACATATGAAGAAATTAAAGAAGTTCACAAGCGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 90 bp AACCTGTCGATACTACAACCCAAACTTCCAGTCAGTTTTTGTGATTaGGTTAGTAGTGAAGAAGTAGGGAATGCTGGTAGGCTTCTAGAA +
Preference number: 1 (lower is better)
Translates to: NLSILQPKLPVSFCD*VSSEEVGNAGRLLE
Trigger: TTCTAGAAGCCTACCAGCATTCCCTACTTCTTCACTACTAACGCAATCACAAAAACTGACTGGAAGTTTGGGTTGTAGTATCGACAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 90 bp AGCAGTTCTGCTGTGCCTAGCTCTTCTTCAGTCAATTCACCTTGGTaGTTATGTATCAACTCTGACAAATACAAAACTAACTTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: SSSAVPSSSSVNSPW*LCINSDKYKTNLAP
Trigger: TGGAGCCAAGTTAGTTTTGTATTTGTCAGAGTTGATACATAATCACCAAGGTGAATTGACTGAAGAAGAGCTAGGCACAGCAGAACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp ACAGTCTTCAGTTACACTGTGAGCACTTGCAGTTCGGTTGTAATTTaGCTCATAACCAAGAGAATAGGCAAAGTTTTCCCAATCATCAGT +
Preference number: 1 (lower is better)
Translates to: TVFSYTVSTCSSVVI*LITKRIGKVFPIIS
Trigger: ACTGATGATTGGGAAAACTTTGCCTATTCTCTTGGTTATGAGCCAAATTACAACCGAACTGCAAGTGCTCACAGTGTAACTGAAGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 90 bp CATCATCACGAACCTTGGTGTTATCAAATGCCAACAGGAGTGTTCTaGCATTTGTTAGAAAGATTTCTACAGCATTATCTCTCAATTGCC +
Preference number: 1 (lower is better)
Translates to: HHHEPWCYQMPTGVF*HLLERFLQHYLSIA
Trigger: GGCAATTGAGAGATAATGCTGTAGAAATCTTTCTAACAAATGGCAGAACACTCCTGTTGGCATTTGATAACACCAAGGTTCGTGATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TGCTCACACTTATCAGTATACTGTATGGTTTGCAAACAAATAAGCTaGTTATCTCTTCTGTGTGACCATAGAGATGTATTTGAGTCTCCA +
Preference number: 1 (lower is better)
Translates to: CSHLSVYCMVCKQIS*LSLLCDHRDVFESP
Trigger: TGGAGACTCAAATACATCTCTATGGTCACACAGAAGAGATAACCAGCTTATTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp TGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTCTTTATaGTATGTAAGTTTGCTGTGGAATACACGAGATTTTATTATTCTT +
Preference number: 1 (lower is better)
Translates to: WERQTAPRCLGILSL*YVSLLWNTRDFIIL
Trigger: AAGAATAATAAAATCTCGTGTATTCCACAGCAAACTTACATACCATAAAGACAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
3UTR CCA 90 bp ATTAATATATTTGGAGTAGTCATTGACTGGCTTGCCATACTTACATaGCATTACAGATGTATGGTTGGGTCCACAAGCATACAGATAAAA +
Preference number: 1 (lower is better)
Translates to: INIFGVVIDWLAILT*HYRCMVGSTSIQIK
Trigger: TTTTATCTGTATGCTTGTGGACCCAACCATACATCTGTAATGCCATGTAAGTATGGCAAGCCAGTCAATGACTACTCCAAATATATTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 90 bp CATATCTTCCAGTCAAGCAATAGTTCCTCTAACAGCTTAACATCTTaGATTATAGCATTAGAGTCTACATCCAACTTAAACTCTCCATTC +
Preference number: 1 (lower is better)
Translates to: HIFQSSNSSSNSLTS*IIALESTSNLNSPF
Trigger: GAATGGAGAGTTTAAGTTGGATGTAGACTCTAATGCTATAATCCAAGATGTTAAGCTGTTAGAGGAACTATTGCTTGACTGGAAGATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAACCACAGATTGCTCTaGTGGGCAGAGCCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSNHRLL*WAEPGE
Trigger: CTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAGGGGGAAGGTTGACGTaGTTAACCCGTTCACCATTC +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSGGRLT*LTRSPF
Trigger: GAATGGTGAACGGGTTAATCACGTCAACCTTCCCCC...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCATTGCTTTCTCTCTTGTaGAGCGTGGGCTGGCGACAA +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSLLSLL*SVGWRQ
Trigger: TTGTCGCCAGCCCACGCTGCACAAGAGAGAAAGCAA...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCTCCGTTTCAGTTGCTTaGCTAGGGTTCTCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSSVSVA*LGFSWL
Trigger: GAGCCAAGAGAACCCTAGCCAAGCAACTGAAACGGA...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCGGGGTCATACCATACTaGTCTATCATGTGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSGVIPY*SIMCQL
Trigger: CAGCTGACACATGATAGAGCAGTATGGTATGACCCC...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCGGATCAGCCCACACTTaGATCATCAACGCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSGSAHT*IINALD
Trigger: ATCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCC...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCATGTCATCTTCTGACCTaGGTTCTGCTCCCAACTGTT +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSCHLLT*VLLPTV
Trigger: AACAGTTGGGAGCAGAACCCAGGTCAGAAGATGACA...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAAAGGTCTGCTTTTGTTaGTGCACTGGGAGGGATGCA +
Preference number: 2 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVKVCFC*CTGRDA
Trigger: TGCATCCCTCCCAGTGCATCAACAAAAGCAGACCTT...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAATGCACTGGGAGGGATaGACTTGTGACCACATAACT +
Preference number: 2 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVMHWEG*TCDHIT
Trigger: AGTTATGTGGTCACAAGTGCATCCCTCCCAGTGCAT...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCCCTGCCAATGTCTGCTaGCACTCAAATCTACTTTAT +
Preference number: 2 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSPANVC*HSNLLY
Trigger: ATAAAGTAGATTTGAGTGCCAGCAGACATTGGCAGG...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAATTTGTCAGAGCGGTaGTGTTACCATATTCCAGAA +
Preference number: 2 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSNLSER*CYHIPE
Trigger: TTCTGGAATATGGTAACATCACCGCTCTGACAAATT...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATCACCGTCCAGAGTCTaGGGTCACTGCCTCCGCCAG +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISPSRV*GHCLRQ
Trigger: CTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGTTCCTGCCAATGTCTaGTGGCACTCAAATCTACTT +
Preference number: 2 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVVPANV*WHSNLL
Trigger: AAGTAGATTTGAGTGCCAGCAGACATTGGCAGGAAC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACTCCCAGCACTCCCTTTaGGACATCACTGACAGAGAC +
Preference number: 2 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDSQHSL*DITDRD
Trigger: GTCTCTGTCAGTGATGTCCCAAAGGGAGTGCTGGGA...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAACAGGTAAGAGAGTaGTGGTTTGACAACATCTTC +
Preference number: 2 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSKQVRE*WFDNIF
Trigger: GAAGATGTTGTCAAACCACCACTCTCTTACCTGTTT...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCCTCCCTCAGGCTGGTTaGAGAAAGCCACGGAACAGA +
Preference number: 2 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLPQAG*RKPRNR
Trigger: TCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAG...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp TCTAATCCCCCAGCGATTACATTGATAGATACTCCCTCAGGCTGGTaGGAGAAAGCCACGGAACAGATGATCTCCCTGCAGTGGACATGT +
Preference number: 2 (lower is better)
Translates to: SNPPAITLIDTPSGW*EKATEQMISLQWTC
Trigger: ACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGCTGCTGTAAGTAGGTaGGTACTAAATGTTGCCATT +
Preference number: 2 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVAAVSR*VLNVAI
Trigger: AATGGCAACATTTAGTACTCACCTACTTACAGCAGC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGAATGCCTCAGGTACATaGTTGACCGCACTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVNASGT*LTALSP
Trigger: AGGAGAAAGTGCGGTCAATCATGTACCTGAGGCATT...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTCTTCAGTTACACTGTaGGCACTTGCAGTTCGGTTG +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVSSVTL*ALAVRL
Trigger: CAACCGAACTGCAAGTGCTCACAGTGTAACTGAAGA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAAAAGTGTATCTGCTTaGATAAGCTTGTCCATCACA +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSKSVSA*ISLSIT
Trigger: TGTGATGGACAAGCTTATTCAAGCAGATACACTTTT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGGCATGGGTGTGAGTTaGCCCTCTTTGTATTCCTGC +
Preference number: 2 (lower is better)
Translates to: QTAIIWERQTAPRCLGILGMGVS*PSLYSC
Trigger: GCAGGAATACAAAGAGGGGCAACTCACACCCATGCC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCATCTCCTGAAAGATCTTaGCATCTATGTGCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSSPERS*HLCAKK
Trigger: TTTCTTTGCACATAGATGGCAAGATCTTTCAGGAGA...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACCCTCCACTGCTGGAATaGCTCAGGTACATGATTGAC +
Preference number: 2 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDPPLLE*LRYMID
Trigger: GTCAATCATGTACCTGAGGCATTCCAGCAGTGGAGG...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCATTCACAAACAGTTTTTaGAGACTCACAGCTACTGAT +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSFTNSF*RLTATD
Trigger: ATCAGTAGCTGTGAGTCTGCAAAAACTGTTTGTGAA...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACCCGCTTTTGAACTACTaGATGATGGGGAGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDPLLNY*MMGSRR
Trigger: CCTTCTGCTCCCCATCATGCAGTAGTTCAAAAGCGG...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGAGTAGTCTCCCAAGCTaGATTCGGAAGGTCTCCTTA +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVSSLPS*IRKVSL
Trigger: TAAGGAGACCTTCCGAATGCAGCTTGGGAGACTACT...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGTAATCAGGTCGGCGTaGGCAGGACTCATCCCCAGG +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIVIRSA*AGLIPR
Trigger: CCTGGGGATGAGTCCTGCCCACGCCGACCTGATTAC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGGGAGCAGAAGGTGACTaGAGTGAATCTGTGAGGTTT +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVGAEGD*SESVRF
Trigger: AAACCTCACAGATTCACTCCAGTCACCTTCTGCTCC...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGCTGCACGGGAGGCATaGGGTCATCTTCTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIAAREA*GHLLWL
Trigger: GAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGATAAAAGGCCTCTTGTaGACCAACCTTAGCTCCGTT +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVIKGLL*TNLSSV
Trigger: AACGGAGCTAAGGTTGGTTCACAAGAGGCCTTTTAT...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGGCTCTGAACTTCTTTTaGGCTGAAGGGTCTTTGAGA +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVALNFF*AEGSLR
Trigger: TCTCAAAGACCCTTCAGCTCAAAAGAAGTTCAGAGC...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCATTGTTAACTGTTTTCTaGCAAGCAGCTTTATTCACT +
Preference number: 2 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSLLTVF*QAALFT
Trigger: AGTGAATAAAGCTGCTTGGCAGAAAACAGTTAACAA...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACACTTGCAATAGTGCTGTaGCTTCGCTGGAAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTLAIVL*LRWKEA
Trigger: GGCCTCCTTCCAGCGAAGCCACAGCACTATTGCAAG...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp TCCTCTCTCGATTTGGCCCTTCTGTTGGATCCAACTGCCATGAGGTaGGATAGTAGATGGGGTCATACCATACTGCTCTATCATGTGTCA +
Preference number: 2 (lower is better)
Translates to: SSLDLALLLDPTAMR*DSRWGHTILLYHVS
Trigger: TGACACATGATAGAGCAGTATGGTATGACCCCATCTACTATCCAACCTCATGGCAGTTGGATCCAACAGAAGGGCCAAATCGAGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp TGCTATATGTCATCAGAAGACAGAAATTCCGTGACAAACCACAGATaGCTCTGGTGGGCAGAGCCTGGAGAGAGCCAAATCTTTCTCCGT +
Preference number: 2 (lower is better)
Translates to: CYMSSEDRNSVTNHR*LWWAEPGESQIFLR
Trigger: ACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTTCTGATGACATATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGGGACCTTCCTCCACTaGTGGAATGCCTCAGGTACA +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIGTFLH*WNASGT
Trigger: TGTACCTGAGGCATTCCAGCAGTGGAGGAAGGTCCC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAATAAGAGTGGCATTGTaGGGATCAGCCCACACTTGG +
Preference number: 2 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGIRVAL*GSAHTW
Trigger: CCAAGTGTGGGCTGATCCCCACAATGCCACTCTTAT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGTTACAGATGTATGGTTaGGTCCACAAGCATACAGAT +
Preference number: 2 (lower is better)
Translates to: TINPGLIRDLPPLLECLRLQMYG*VHKHTD
Trigger: ATCTGTATGCTTGTGGACCCAACCATACATCTGTAA...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTCTATCAACAAGACTTaGCCAACGGCCAACAGCTGC +
Preference number: 2 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQSINKT*PTANSC
Trigger: GCAGCTGTTGGCCGTTGGCCAAGTCTTGTTGATAGA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACAGCTGTCTCTCTAGATaGTGCAACACTGATGCATCT +
Preference number: 2 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDSCLSR*CNTDAS
Trigger: AGATGCATCAGTGTTGCACCATCTAGAGAGACAGCT...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATGTTTCAAGCGCTGCTaGTCCTTCCGACACCAGGCA +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIICFKRC*SFRHQA
Trigger: TGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp AATAACATCTCTGTAAACGTCTCCTCTCTCGATTTGGCCCTTCTGTaGGATCCAACTGCCATGAGGTTGGATAGTAGATGGGGTCATACC +
Preference number: 2 (lower is better)
Translates to: NNISVNVSSLDLALL*DPTAMRLDSRWGHT
Trigger: GGTATGACCCCATCTACTATCCAACCTCATGGCAGTTGGATCCAACAGAAGGGCCAAATCGAGAGAGGAGACGTTTACAGAGATGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACAGGTTTTCAGAGTCATaGTTTGCGGTGGTCCTTATA +
Preference number: 2 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDRFSES*FAVVLI
Trigger: TATAAGGACCACCGCAAATCATGACTCTGAAAACCT...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGGGAGGGATGCACTTGTaGCCACATAACTTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQGGMHL*PHNFKA
Trigger: TGCTTTGAAGTTATGTGGTCACAAGTGCATCCCTCC...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCTCAGACTCTAGAGCCTaGCGATGGATGAGGATAAAA +
Preference number: 2 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSDSRA*RWMRIK
Trigger: TTTTATCCTCATCCATCGGCAGGCTCTAGAGTCTGA...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGCATCATCACGAACCTTaGTGTTATCAAATGCCAACA +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVHHHEP*CYQMPT
Trigger: TGTTGGCATTTGATAACACCAAGGTTCGTGATGATG...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp CTCCATAACCTTACAATTCCATTTTCTAATCCCCCAGCGATTACATaGATAGATACTCCCTCAGGCTGGTTGGAGAAAGCCACGGAACAG +
Preference number: 2 (lower is better)
Translates to: LHNLTIPFSNPPAIT*IDTPSGWLEKATEQ
Trigger: CTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTAAGGTTATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGAACTTCTTTTGAGCTaGAGGGTCTTTGAGAGAGTT +
Preference number: 2 (lower is better)
Translates to: QTAIIWERQTAPRCLGILELLLS*RVFERV
Trigger: AACTCTCTCAAAGACCCTTCAGCTCAAAAGAAGTTC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGAGGAACTGCAAGCATaGATTGTAACTGCTATGAAA +
Preference number: 2 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDEELQA*IVTAMK
Trigger: TTTCATAGCAGTTACAATTCATGCTTGCAGTTCCTC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTCATGTGTCAGCTGCTaGATAAGTTCCTGCCAATGT +
Preference number: 2 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQSCVSC*ISSCQC
Trigger: ACATTGGCAGGAACTTATTCAGCAGCTGACACATGA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTTTGACAACATCTTCTaGTTTCTGTCTATCCCTAAG +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVFDNIF*FLSIPK
Trigger: CTTAGGGATAGACAGAAATCAGAAGATGTTGTCAAA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGACTGCTATGAAAAGTTaGTGTATATCACAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVTAMKS*CISQAS
Trigger: GCTTGCTTGTGATATACAGCAACTTTTCATAGCAGT...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACTTCTCTGGCTCCTTTaGGGTACTCTTCCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILLWLL*GTLPPS
Trigger: ACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGTGGGATGATAAACAATaGCCAATCATGCAAAATGTT +
Preference number: 2 (lower is better)
Translates to: TINPGLIRDLPPLLECLRWDDKQ*PIMQNV
Trigger: AACATTTTGCATGATTGGCCATTGTTTATCATCCCA...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGGCATTACAGATGTATaGTTGGGTCCACAAGCATAC +
Preference number: 2 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGGITDV*LGPQAY
Trigger: GTATGCTTGTGGACCCAACCATACATCTGTAATGCC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGGAGTAGTCATTGACTaGCTTGCCATACTTACATGG +
Preference number: 2 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGGVVID*LAILTW
Trigger: CCATGTAAGTATGGCAAGCCAGTCAATGACTACTCC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGAAAAGTAGAAGTTCGTaGGATTGTGACAAACGTAAG +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVKSRSS*DCDKRK
Trigger: CTTACGTTTGTCACAATCCCACGAACTTCTACTTTT...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp AATAGGCAAAGTTTTCCCAATCATCAGTGTTTCTATCAACAAGACTaGGCCAACGGCCAACAGCTGCAGATCCGTTCTGTGAAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: NRQSFPNHQCFYQQD*ANGQQLQIRSVKEK
Trigger: CTTTTCCTTCACAGAACGGATCTGCAGCTGTTGGCCGTTGGCCAAGTCTTGTTGATAGAAACACTGATGATTGGGAAAACTTTGCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACATTTCTTCACAGCTACTaGGTTCAACAACCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTFLHSY*VQQPWQ
Trigger: TTGCCAGGGTTGTTGAACTCAGTAGCTGTGAAGAAA...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGACTGGAGTGAATCTGTaGGGTTTTCAGAGTCATGAT +
Preference number: 2 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQTGVNL*GFQSHD
Trigger: ATCATGACTCTGAAAACCTCACAGATTCACTCCAGT...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGCTAAATGTTGCCATTTaGTTGGGAGGAAAATATTCT +
Preference number: 2 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVLNVAI*LGGKYS
Trigger: AGAATATTTTCCTCCCAAGCAAATGGCAACATTTAG...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTACACTGTGAGCACTTaGAGTTCGGTTGTAATTTGG +
Preference number: 2 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQYTVST*SSVVIW
Trigger: CCAAATTACAACCGAACTGCAAGTGCTCACAGTGTA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGGATCATCAACGCTTTaGATCCCAGTGAAATTATAT +
Preference number: 2 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDGSSTL*IPVKLY
Trigger: ATATAATTTCACTGGGATCCAAAGCGTTGATGATCC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTCACTGGTTCATAGATaGTATACTGAGCAGGACAGT +
Preference number: 2 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFSLVHR*YTEQDS
Trigger: ACTGTCCTGCTCAGTATACCATCTATGAACCAGTGA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGCTAGAACGCAGCATATaGGCGGCCATCTGTTGTGGA +
Preference number: 2 (lower is better)
Translates to: LRFTLIDSLAALSLTVEELERSI*AAICCG
Trigger: TCCACAACAGATGGCCGCCCATATGCTGCGTTCTAG...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACAATAGCTGGTGATGGGTaGTTAACGAGGACCAAAAGT +
Preference number: 2 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTIAGDG*LTRTKS
Trigger: ACTTTTGGTCCTCGTTAACCACCCATCACCAGCTAT...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp TCTCTTGGCTCATTCTCCGTTGCATCATCACATGAAGCTCATCATTaGCCACTGAACGCATTTTCATCAGAAGCGATTCAGTTTGAGCAA +
Preference number: 2 (lower is better)
Translates to: SLGSFSVASSHEAHH*PLNAFSSEAIQFEQ
Trigger: TTGCTCAAACTGAATCGCTTCTGATGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATGTGATGATGCAACGGAGAATGAGCCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTCGCAGTGCTAATGCTTaGGTTTCTTCACAGCTACTG +
Preference number: 2 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPRSANA*VSSQLL
Trigger: CAGTAGCTGTGAAGAAACTCAAGCATTAGCACTGCG...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGACCAAAAGTGTATCTaGTTGAATAAGCTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: QTAIIWERQTAPRCLGILDQKCI*LNKLVH
Trigger: ATGGACAAGCTTATTCAAGCAGATACACTTTTGGTC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACAAGAATTTTAGTCCATTaGTGCTTGGAACCACTGGCT +
Preference number: 2 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTRILVH*CLEPLA
Trigger: AGCCAGTGGTTCCAAGCAGCAATGGACTAAAATTCT...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTATCTGCTTTGACCACTaGAAATCCCAGCACTCCCTT +
Preference number: 2 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPICFDH*KSQHSL
Trigger: AAGGGAGTGCTGGGATTTCCAGTGGTCAAAGCAGAT...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp CGGAAGGTCTCCTTACAAGACCACAGAATTTTAGTCCATTGCTGCTaGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCT +
Preference number: 2 (lower is better)
Translates to: RKVSLQDHRILVHCC*EPLALLEPIDTLNP
Trigger: AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATGGACTAAAATTCTGTGGTCTTGTAAGGAGACCTTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGAGCTGAAGGGTCTTTaGGAGAGTTGGGTTTTCATT +
Preference number: 2 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPELKGL*ESWVFI
Trigger: AATGAAAACCCAACTCTCTCAAAGACCCTTCAGCTC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGGACCGCACTTTCTCCTaGAAGATCTTGCCATCTATG +
Preference number: 2 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEDRTFS*KILPSM
Trigger: CATAGATGGCAAGATCTTTCAGGAGAAAGTGCGGTC...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCATCCAGCAACATATCTaGTACCTTAGAACAAGAATT +
Preference number: 2 (lower is better)
Translates to: QTAIIWERQTAPRCLGILIQQHI*YLRTRI
Trigger: AATTCTTGTTCTAAGGTAGCAGATATGTTGCTGGAT...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTTCAGAGTCATGATTTaGGGTGGTCCTTATAAATTC +
Preference number: 2 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQFRVMI*GGPYKF
Trigger: GAATTTATAAGGACCACCGCAAATCATGACTCTGAA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGCCAACAGGAGTGTTCTaGCATTTGTTAGAAAGATTT +
Preference number: 2 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQPTGVF*HLLERF
Trigger: AAATCTTTCTAACAAATGGCAGAACACTCCTGTTGG...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGATGCAAAAACTCTTCTTaGGATGATAAACAATGGCCA +
Preference number: 2 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGCKNSS*DDKQWP
Trigger: TGGCCATTGTTTATCATCCCAAGAAGAGTTTTTGCA...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCTTGCCATACTTACATaGCATTACAGATGTATGGTT +
Preference number: 2 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLAILT*HYRCMV
Trigger: AACCATACATCTGTAATGCCATGTAAGTATGGCAAG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp AACAGTCTTCAGTTACACTGTGAGCACTTGCAGTTCGGTTGTAATTaGGCTCATAACCAAGAGAATAGGCAAAGTTTTCCCAATCATCAG +
Preference number: 2 (lower is better)
Translates to: NSLQLHCEHLQFGCN*AHNQENRQSFPNHQ
Trigger: CTGATGATTGGGAAAACTTTGCCTATTCTCTTGGTTATGAGCCAAATTACAACCGAACTGCAAGTGCTCACAGTGTAACTGAAGACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp CACGAACCTTGGTGTTATCAAATGCCAACAGGAGTGTTCTGCCATTaGTTAGAAAGATTTCTACAGCATTATCTCTCAATTGCCACCAAC +
Preference number: 2 (lower is better)
Translates to: HEPWCYQMPTGVFCH*LERFLQHYLSIATN
Trigger: GTTGGTGGCAATTGAGAGATAATGCTGTAGAAATCTTTCTAACAAATGGCAGAACACTCCTGTTGGCATTTGATAACACCAAGGTTCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACATATAATTTTCACAAATaGTCTACAAACCTCTCGGGG +
Preference number: 2 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTYNFHK*STNLSG
Trigger: CCCCGAGAGGTTTGTAGATCATTTGTGAAAATTATA...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGATGACAGACCACTTCTaGAACAATCCCATGTTTCTC +
Preference number: 2 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEMTDHF*NNPMFL
Trigger: GAGAAACATGGGATTGTTTCAGAAGTGGTCTGTCAT...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACATAGATTCAAAAGATaGGAGTCGCCAAGTTGTATT +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIHRFKR*ESPSCI
Trigger: AATACAACTTGGCGACTCTCATCTTTTGAATCTATG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGTGAGTACTAAATGTTaGCATTTGCTTGGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPVSTKC*HLLGRK
Trigger: TTTCCTCCCAAGCAAATGGCAACATTTAGTACTCAC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGATTTTAGTCCATTGCTaGTTGGAACCACTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEILVHC*LEPLAL
Trigger: TAAAGCCAGTGGTTCCAAGCAGCAATGGACTAAAAT...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGAAGAAAATTCTTCCTaGAGATTAGATCAAATGCCT +
Preference number: 2 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIEENSS*RLDQMP
Trigger: AGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR-3UTR CCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGGTTTCTTTGATTGGGTaGCAACATAAGTATCTGCAA +
Preference number: 2 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEVSLIG*QHKYLQ
Trigger: TTGCAGATACTTATGTTGCCACCCAATCAAAGAAAC...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp CAAATGCCTTATTTAGGCTGTGTTCTTAATACCCATGCAAACTTCTaGCATACTGAAGGCTTTCTATTGCAAATTGGTACAGATTCAATG +
Preference number: 2 (lower is better)
Translates to: QMPYLGCVLNTHANF*HTEGFLLQIGTDSM
Trigger: CATTGAATCTGTACCAATTTGCAATAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAAATAAGGCATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGTATTAGTAGGAGGGTaGACTGCTAAAAGGAAATTG +
Preference number: 2 (lower is better)
Translates to: FVNKANHFNVNRSNLISAVLVGG*TAKRKL
Trigger: CAATTTCCTTTTAGCAGTTCACCCTCCTACTAATAC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 90 bp ACGGCTCCAAGATGTTTAGGAATTCTGTCTTTATGGTATGTAAGTTaGCTGTGGAATACACGAGATTTTATTATTCTTCCTAGAATTCTC +
Preference number: 2 (lower is better)
Translates to: TAPRCLGILSLWYVS*LWNTRDFIILPRIL
Trigger: GAGAATTCTAGGAAGAATAATAAAATCTCGTGTATTCCACAGCAAACTTACATACCATAAAGACAGAATTCCTAAACATCTTGGAGCCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
3UTR-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATTTCATGTCATCATTTaGATCCATGCACACACGAAA +
Preference number: 2 (lower is better)
Translates to: FVNKANHFNVNRSNLISAFHVII*IHAHTK
Trigger: TTTCGTGTGTGCATGGATTCAAATGATGACATGAAA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp CCTGGAGAGAGCCAAATCTTTCTCCGTGGGGCTGGCTaGAGCAGACCACAGGTACTGGAGCACTGGGGGAAC +
Preference number: 3 (lower is better)
Translates to: PGESQIFLRGAG*SRPQVLEHWGN
Trigger: GTTCCCCCAGTGCTCCAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp AGAGCCTGGAGAGAGCCAAATCTTTCTCCGTGGGGCTaGCTGAAGCAGACCACAGGTACTGGAGCACTGGGG +
Preference number: 3 (lower is better)
Translates to: RAWREPNLSPWG*LKQTTGTGALG
Trigger: CCCCAGTGCTCCAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp GTGGGCAGAGCCTGGAGAGAGCCAAATCTTTCTCCGTaGGGCTGGCTGAAGCAGACCACAGGTACTGGAGCA +
Preference number: 3 (lower is better)
Translates to: VGRAWREPNLSP*GWLKQTTGTGA
Trigger: TGCTCCAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp CATGTCCAACGAGATCCCCGTTCACCGTCCAGAGTCTaGGGTCACTGCCTCCGCCAGCTGAATCACACACAG +
Preference number: 3 (lower is better)
Translates to: HVQRDPRSPSRV*GHCLRQLNHTQ
Trigger: CTGTGTGTGATTCAGCTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp CTCCCTCAGGCTGGTTGGAGAAAGCCACGGAACAGATaGTCTCCCTGCAGTGGACATGTCCAACGAGATCCC +
Preference number: 3 (lower is better)
Translates to: LPQAGWRKPRNR*SPCSGHVQRDP
Trigger: GGGATCTCGTTGGACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp AGTGGGAGCCATAGTGATAGGGCTGCACGGGAGGCATaGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTT +
Preference number: 3 (lower is better)
Translates to: SGSHSDRAAREA*GHLLWLLCGTL
Trigger: AAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGCCCTATCACTATGGCTCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp TTGGAGAAAGCCACGGAACAGATGATCTCCCTGCAGTaGACATGTCCAACGAGATCCCCGTTCACCGTCCAG +
Preference number: 3 (lower is better)
Translates to: LEKATEQMISLQ*TCPTRSPFTVQ
Trigger: CTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp CCACTGGAAATCCCAGCACTCCCTTTGGGACATCACTaGCAGAGACCTGGGCTGAGAGGACAGCTTCCATTT +
Preference number: 3 (lower is better)
Translates to: PLEIPALPLGHH*QRPGLRGQLPF
Trigger: AAATGGAAGCTGTCCTCTCAGCCCAGGTCTCTGTCAGTGATGTCCCAAAGGGAGTGCTGGGATTTCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp CCCGGCTGCATAGCTGCTAAGGAAGGAATAGAACATTaGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCA +
Preference number: 3 (lower is better)
Translates to: PGCIAAKEGIEH*LFQALLVLPTP
Trigger: TGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAATGGGCGGCCATCTGTaGTGGAATAATATTAGAGGA +
Preference number: 3 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSMGGHL*WNNIRG
Trigger: TCCTCTAATATTATTCCACAACAGATGGCCGCCCAT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAATGCTTTTCCGCTTTaGAACTACTGCATGATGGGG +
Preference number: 3 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSNAFPL*NYCMMG
Trigger: CCCCATCATGCAGTAGTTCAAAAGCGGAAAAGCATT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp CCCAGCACTCCCTTTGGGACATCACTGACAGAGACCTaGGCTGAGAGGACAGCTTCCATTTCACAAACAGTT +
Preference number: 3 (lower is better)
Translates to: PSTPFGTSLTET*AERTASISQTV
Trigger: AACTGTTTGTGAAATGGAAGCTGTCCTCTCAGCCCAGGTCTCTGTCAGTGATGTCCCAAAGGGAGTGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp GCTGTGATGACACCGCATTTGCTTCCAGTAAACAGCTaGCAACTGTCAGGCACCCAAGCACAACTAGTCACC +
Preference number: 3 (lower is better)
Translates to: AVMTPHLLPVNS*QLSGTQAQLVT
Trigger: GGTGACTAGTTGTGCTTGGGTGCCTGACAGTTGCCAGCTGTTTACTGGAAGCAAATGCGGTGTCATCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp CCCCCAGCGATTACATTGATAGATACTCCCTCAGGCTaGTTGGAGAAAGCCACGGAACAGATGATCTCCCTG +
Preference number: 3 (lower is better)
Translates to: PPAITLIDTPSG*LEKATEQMISL
Trigger: CAGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCACCCAACAATGCATTTTaGTTTGATCAACACCTGATG +
Preference number: 3 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSPNNAF*FDQHLM
Trigger: CATCAGGTGTTGATCAAACAAAAATGCATTGTTGGG...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTTCTATCAACAAGACTaGGCCAACGGCCAACAGCTG +
Preference number: 3 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVFYQQD*ANGQQL
Trigger: CAGCTGTTGGCCGTTGGCCAAGTCTTGTTGATAGAA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp TTTCTCTCTTGTGCAGCGTGGGCTGGCGACAAAATATaGACTAGTAGTCTCCCAAGCTGCATTCGGAAGGTC +
Preference number: 3 (lower is better)
Translates to: FLSCAAWAGDKI*TSSLPSCIRKV
Trigger: GACCTTCCGAATGCAGCTTGGGAGACTACTAGTGCATATTTTGTCGCCAGCCCACGCTGCACAAGAGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp CTCTGTAGTCTCTGCGCAAGTTCCGTTTCAGTTGCTTaGCTAGGGTTCTCTTGGCTCATTCTCCGTTGCATC +
Preference number: 3 (lower is better)
Translates to: LCSLCASSVSVA*LGFSWLILRCI
Trigger: GATGCAACGGAGAATGAGCCAAGAGAACCCTAGCCAAGCAACTGAAACGGAACTTGCGCAGAGACTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp ACCTGGGTTCTGCTCCCAACTGTTTATGATCTGCTTTaGCCACTGGAAATCCCAGCACTCCCTTTGGGACAT +
Preference number: 3 (lower is better)
Translates to: TWVLLPTVYDLL*PLEIPALPLGH
Trigger: ATGTCCCAAAGGGAGTGCTGGGATTTCCAGTGGTCAAAGCAGATCATAAACAGTTGGGAGCAGAACCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp TCATCTTCTGACCTGGGTTCTGCTCCCAACTGTTTATaGTCTGCTTTGACCACTGGAAATCCCAGCACTCCC +
Preference number: 3 (lower is better)
Translates to: SSSDLGSAPNCL*SALTTGNPSTP
Trigger: GGGAGTGCTGGGATTTCCAGTGGTCAAAGCAGATCATAAACAGTTGGGAGCAGAACCCAGGTCAGAAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp CTCTCGATTTGGCCCTTCTGTTGGATCCAACTGCCATaGGGTTGGATAGTAGATGGGGTCATACCATACTGC +
Preference number: 3 (lower is better)
Translates to: LSIWPFCWIQLP*GWIVDGVIPYC
Trigger: GCAGTATGGTATGACCCCATCTACTATCCAACCTCATGGCAGTTGGATCCAACAGAAGGGCCAAATCGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp CAATATCACCTGAGGTTTCACTGGCAGAGACAGCTGTaGCAGGGCTTTTGTGTCCCGCCAGACTTTGTACAT +
Preference number: 3 (lower is better)
Translates to: QYHLRFHWQRQL*QGFCVPPDFVH
Trigger: ATGTACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCAGTGAAACCTCAGGTGATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp TGGACCTCAGGATTCACACCTGGCCTGAGCACACGGTaGTCTAAATGCAGCCTAGGTATCACTACATGTGTA +
Preference number: 3 (lower is better)
Translates to: WTSGFTPGLSTR*SKCSLGITTCV
Trigger: TACACATGTAGTGATACCTAGGCTGCATTTAGATCACCGTGTGCTCAGGCCAGGTGTGAATCCTGAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR GCA 72 bp CTGTTGACTGCTAAAACAGTGAGCCTCTGTAGTCTCTaGGCAAGTTCCGTTTCAGTTGCTTGGCTAGGGTTC +
Preference number: 3 (lower is better)
Translates to: LLTAKTVSLCSL*ASSVSVAWLGF
Trigger: GAACCCTAGCCAAGCAACTGAAACGGAACTTGCGCAGAGACTACAGAGGCTCACTGTTTTAGCAGTCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp ACAGCTGACGGGGAGTCTGCCCGTAGGTTTTTATCATaGTTTCTAGCGCTCGTCTCTGAACTGGATCTTCAA +
Preference number: 3 (lower is better)
Translates to: TADGESARRFLS*FLALVSELDLQ
Trigger: TTGAAGATCCAGTTCAGAGACGAGCGCTAGAAACCATGATAAAAACCTACGGGCAGACTCCCCGTCAGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp GAAGACAGAAATTCCGTGACAAACCACAGATTGCTCTaGTGGGCAGAGCCTGGAGAGAGCCAAATCTTTCTC +
Preference number: 3 (lower is better)
Translates to: EDRNSVTNHRLL*WAEPGESQIFL
Trigger: GAGAAAGATTTGGCTCTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTTAGTCCATTGCTGCTaGGAACCACTGGCTTTACTT +
Preference number: 3 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVLVHCC*EPLALL
Trigger: AAGTAAAGCCAGTGGTTCCAAGCAGCAATGGACTAA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACTTTTCTCTCATTTCCTaGGGAGAGAGACACTGCCTG +
Preference number: 3 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDFSLIS*GERHCL
Trigger: CAGGCAGTGTCTCTCTCCCAAGGAAATGAGAGAAAA...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp TTATCAGCATATCCCCAGCTCAGGATGGCTGACCACTaGATGTCCGTACTGTTCATGCTTCTCACACCTTGT +
Preference number: 3 (lower is better)
Translates to: LSAYPQLRMADH*MSVLFMLLTPC
Trigger: ACAAGGTGTGAGAAGCATGAACAGTACGGACATTCAGTGGTCAGCCATCCTGAGCTGGGGATATGCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp CTTCCGACACCAGGCAATCACGGTCCCATCACTGTTTaGTGTGTACAAATGGTGGCCATCACAAGAAAATGT +
Preference number: 3 (lower is better)
Translates to: LPTPGNHGPITV*CVQMVAITRKC
Trigger: ACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp GAATCCATGCACACACGAAAGATAAGAGTGGCATTGTaGGGATCAGCCCACACTTGGATCATCAACGCTTTG +
Preference number: 3 (lower is better)
Translates to: ESMHTRKIRVAL*GSAHTWIINAL
Trigger: CAAAGCGTTGATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTGCATGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGAAGATAAGAGTGGCATaGTGGGGATCAGCCCACACT +
Preference number: 3 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQKIRVA*WGSAHT
Trigger: AGTGTGGGCTGATCCCCACAATGCCACTCTTATCTT...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGCCAACCTTAGCTCCGTaGAAGAGAAGCAAATTTCCC +
Preference number: 3 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQPTLAP*KRSKFP
Trigger: GGGAAATTTGCTTCTCTTCAACGGAGCTAAGGTTGG...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCAGCATTATCTCTCAATaGCCACCAACGCTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSIISQ*PPTLVN
Trigger: GTTCACAAGCGTTGGTGGCAATTGAGAGATAATGCT...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp TTCCTTGCTATATGTCATCAGAAGACAGAAATTCCGTaGCAAACCACAGATTGCTCTGGTGGGCAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: FLAICHQKTEIP*QTTDCSGGQSL
Trigger: CAGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTTCTGATGACATATAGCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp GCTGGCGACAAAATATGCACTAGTAGTCTCCCAAGCTaGATTCGGAAGGTCTCCTTACAAGACCACAGAATT +
Preference number: 3 (lower is better)
Translates to: AGDKICTSSLPS*IRKVSLQDHRI
Trigger: AATTCTGTGGTCTTGTAAGGAGACCTTCCGAATGCAGCTTGGGAGACTACTAGTGCATATTTTGTCGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp TTTGGAGAACGTGAAGTTCATTCGCATTCACCCGGCTaGATAGCTGCTAAGGAAGGAATAGAACATTGGCTG +
Preference number: 3 (lower is better)
Translates to: FGEREVHSHSPG*IAAKEGIEHWL
Trigger: CAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGGTGAATGCGAATGAACTTCACGTTCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp GTAGGGAATGCTGGTAGGCTTCTAGAACGCAGCATATaGGCGGCCATCTGTTGTGGAATAATATTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: VGNAGRLLERSI*AAICCGIILEE
Trigger: TTCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGCCTACCAGCATTCCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp ATCACGGTCCCATCACTGTTTGCTGTGTACAAATGGTaGCCATCACAAGAAAATGTAAGGCTGATGATGGGC +
Preference number: 3 (lower is better)
Translates to: ITVPSLFAVYKW*PSQENVRLMMG
Trigger: GCCCATCATCAGCCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACCTTGCAGCTTTGTCTTaGACAGTAGAAGAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDLAALS*TVEEKE
Trigger: TTCTTTCTCTTCTACTGTCAAAGACAAAGCTGCAAG...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp GAATCCTCCTTTTCCCTTGGGGCTGCTGTAAGTAGGTaGGTACTAAATGTTGCCATTTGCTTGGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: ESSFSLGAAVSR*VLNVAICLGGK
Trigger: TTTTCCTCCCAAGCAAATGGCAACATTTAGTACTCACCTACTTACAGCAGCCCCAAGGGAAAAGGAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp GGTGACTGGAGTGAATCTGTGAGGTTTTCAGAGTCATaGTTTGCGGTGGTCCTTATAAATTCCATAGCAGCC +
Preference number: 3 (lower is better)
Translates to: GDWSESVRFSES*FAVVLINSIAA
Trigger: GGCTGCTATGGAATTTATAAGGACCACCGCAAATCATGACTCTGAAAACCTCACAGATTCACTCCAGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp GCAATCACGGTCCCATCACTGTTTGCTGTGTACAAATaGTGGCCATCACAAGAAAATGTAAGGCTGATGATG +
Preference number: 3 (lower is better)
Translates to: AITVPSLFAVYK*WPSQENVRLMM
Trigger: CATCATCAGCCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGATTACAGATGTATGGTaGGGTCCACAAGCATACAGA +
Preference number: 3 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQITDVW*GPQAYR
Trigger: TCTGTATGCTTGTGGACCCAACCATACATCTGTAAT...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp GTTGGGTCCACAAGCATACAGATAAAAGGCCTCTTGTaGACCAACCTTAGCTCCGTTGAAGAGAAGCAAATT +
Preference number: 3 (lower is better)
Translates to: VGSTSIQIKGLL*TNLSSVEEKQI
Trigger: AATTTGCTTCTCTTCAACGGAGCTAAGGTTGGTTCACAAGAGGCCTTTTATCTGTATGCTTGTGGACCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp CCGTTGCATCATCACATGAAGCTCATCATTTGCCACTaGACGCATTTTCATCAGAAGCGATTCAGTTTGAGC +
Preference number: 3 (lower is better)
Translates to: PLHHHMKLIICH*THFHQKRFSLS
Trigger: GCTCAAACTGAATCGCTTCTGATGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATGTGATGATGCAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp AAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTaGATCATCAACGCTTTGGATCCCAGTGAAATTATA +
Preference number: 3 (lower is better)
Translates to: KIRVALWGSAHT*IINALDPSEII
Trigger: TATAATTTCACTGGGATCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTaGAATAATATTAGAGGAATTCTCTCCTTCATATGG +
Preference number: 3 (lower is better)
Translates to: ASRTQHMGGHLL*NNIRGILSFIW
Trigger: CCATATGAAGGAGAGAATTCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp ACCTTAAAATATTATCAGCATATCCCCAGCTCAGGATaGCTGACCACTGAATGTCCGTACTGTTCATGCTTC +
Preference number: 3 (lower is better)
Translates to: TLKYYQHIPSSG*LTTECPYCSCF
Trigger: GAAGCATGAACAGTACGGACATTCAGTGGTCAGCCATCCTGAGCTGGGGATATGCTGATAATATTTTAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGGGATCAGCCCACACTaGGATCATCAACGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEGISPH*DHQRFG
Trigger: TCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCCC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACACATGAAGCTCATCATTaGCCACTGAACGCATTTTCA +
Preference number: 3 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTHEAHH*PLNAFS
Trigger: TGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATG...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp ACAAAACTAACTTGGCTCCATGTTGTAGGGATGGGCTaGGACAGTCTCGTAGTATTTCCTGATGATTTGGTT +
Preference number: 3 (lower is better)
Translates to: TKLTWLHVVGMG*DSLVVFPDDLV
Trigger: AACCAAATCATCAGGAAATACTACGAGACTGTCTCAGCCCATCCCTACAACATGGAGCCAAGTTAGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp TGTGGGGATCAGCCCACACTTGGATCATCAACGCTTTaGATCCCAGTGAAATTATATGAATACATCCTTCTT +
Preference number: 3 (lower is better)
Translates to: CGDQPTLGSSTL*IPVKLYEYILL
Trigger: AAGAAGGATGTATTCATATAATTTCACTGGGATCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp TTTGGAGTAGTCATTGACTGGCTTGCCATACTTACATaGCATTACAGATGTATGGTTGGGTCCACAAGCATA +
Preference number: 3 (lower is better)
Translates to: FGVVIDWLAILT*HYRCMVGSTSI
Trigger: TATGCTTGTGGACCCAACCATACATCTGTAATGCCATGTAAGTATGGCAAGCCAGTCAATGACTACTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp ACTATTTCAAAAATTTGCTTTCTCTCTTGTGCAGCGTaGGCTGGCGACAAAATATGCACTAGTAGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: TISKICFLSCAA*AGDKICTSSLP
Trigger: TGGGAGACTACTAGTGCATATTTTGTCGCCAGCCCACGCTGCACAAGAGAGAAAGCAAATTTTTGAAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAACCCATGCAAACTTCTaGCATACTGAAGGCTTTCTA +
Preference number: 3 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIITHANF*HTEGFL
Trigger: TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR GCA 72 bp GTCTCCTTACAAGACCACAGAATTTTAGTCCATTGCTaGTTGGAACCACTGGCTTTACTTGAACCAATAGAT +
Preference number: 3 (lower is better)
Translates to: VSLQDHRILVHC*LEPLALLEPID
Trigger: ATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATGGACTAAAATTCTGTGGTCTTGTAAGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp AAGGTCTCCTTACAAGACCACAGAATTTTAGTCCATTaGTGCTTGGAACCACTGGCTTTACTTGAACCAATA +
Preference number: 3 (lower is better)
Translates to: KVSLQDHRILVH*CLEPLALLEPI
Trigger: TATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATGGACTAAAATTCTGTGGTCTTGTAAGGAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp ACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTaGTTTGGAGAACGTGAAGTTCATTCGCATTCACCC +
Preference number: 3 (lower is better)
Translates to: TGEVNKSSLELK*FGEREVHSHSP
Trigger: GGGTGAATGCGAATGAACTTCACGTTCTCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp AGTTACACTGTGAGCACTTGCAGTTCGGTTGTAATTTaGCTCATAACCAAGAGAATAGGCAAAGTTTTCCCA +
Preference number: 3 (lower is better)
Translates to: SYTVSTCSSVVI*LITKRIGKVFP
Trigger: TGGGAAAACTTTGCCTATTCTCTTGGTTATGAGCCAAATTACAACCGAACTGCAAGTGCTCACAGTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp GAGGTTCTAATAAGATGCTCTGAACTTCTTTTGAGCTaGAGGGTCTTTGAGAGAGTTGGGTTTTCATTTGAC +
Preference number: 3 (lower is better)
Translates to: EVLIRCSELLLS*RVFERVGFSFD
Trigger: GTCAAATGAAAACCCAACTCTCTCAAAGACCCTTCAGCTCAAAAGAAGTTCAGAGCATCTTATTAGAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp GACTTTGTACATAGCATAACCTGTTTAAATCCCATATaGTGCAGGTTCCGTCTCTGCTCACACTTATCAGTA +
Preference number: 3 (lower is better)
Translates to: DFVHSITCLNPI*CRFRLCSHLSV
Trigger: TACTGATAAGTGTGAGCAGAGACGGAACCTGCATCATATGGGATTTAAACAGGTTATGCTATGTACAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR-3UTR CAA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGTGGATCATCAACGCTTaGGATCCCAGTGAAATTATA +
Preference number: 3 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEWIINA*DPSEII
Trigger: TATAATTTCACTGGGATCCAAAGCGTTGATGATCCA...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp TGGATCATCAACGCTTTGGATCCCAGTGAAATTATATaGATACATCCTTCTTCTATGAGTCTTTCACCAGGA +
Preference number: 3 (lower is better)
Translates to: WIINALDPSEII*IHPSSMSLSPG
Trigger: TCCTGGTGAAAGACTCATAGAAGAAGGATGTATTCATATAATTTCACTGGGATCCAAAGCGTTGATGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp TTAATTAATGAGAGTATAACTCGCAGTGCTAATGCTTaGGTTTCTTCACAGCTACTGAGTTCAACAACCCTG +
Preference number: 3 (lower is better)
Translates to: LINESITRSANA*VSSQLLSSTTL
Trigger: CAGGGTTGTTGAACTCAGTAGCTGTGAAGAAACTCAAGCATTAGCACTGCGAGTTATACTCTCATTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp GCTGTGCCTAGCTCTTCTTCAGTCAATTCACCTTGGTaGTTATGTATCAACTCTGACAAATACAAAACTAAC +
Preference number: 3 (lower is better)
Translates to: AVPSSSSVNSPW*LCINSDKYKTN
Trigger: GTTAGTTTTGTATTTGTCAGAGTTGATACATAATCACCAAGGTGAATTGACTGAAGAAGAGCTAGGCACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp GAACCTTGGTGTTATCAAATGCCAACAGGAGTGTTCTaGCATTTGTTAGAAAGATTTCTACAGCATTATCTC +
Preference number: 3 (lower is better)
Translates to: EPWCYQMPTGVF*HLLERFLQHYL
Trigger: GAGATAATGCTGTAGAAATCTTTCTAACAAATGGCAGAACACTCCTGTTGGCATTTGATAACACCAAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp ACAATTCTTGAGTTCCTCGATGAAGATACAACTGGTTaGCTAGCAAGGAAAATCCACGATTCTTCAGAAATT +
Preference number: 3 (lower is better)
Translates to: TILEFLDEDTTG*LARKIHDSSEI
Trigger: AATTTCTGAAGAATCGTGGATTTTCCTTGCTAGCCAACCAGTTGTATCTTCATCGAGGAACTCAAGAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp CAGACGGCTCCAAGATGTTTAGGAATTCTGTCTTTATaGTATGTAAGTTTGCTGTGGAATACACGAGATTTT +
Preference number: 3 (lower is better)
Translates to: QTAPRCLGILSL*YVSLLWNTRDF
Trigger: AAAATCTCGTGTATTCCACAGCAAACTTACATACCATAAAGACAGAATTCCTAAACATCTTGGAGCCGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
3UTR-3UTR CAA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGAACTGCTATGAAAAGTaGCTGTATATCACAAGCAAG +
Preference number: 3 (lower is better)
Translates to: LRFTLIDSLAALSLTVEENCYEK*LYITSK
Trigger: CTTGCTTGTGATATACAGCAACTTTTCATAGCAGTT...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR GCA 72 bp ACTGATGCATCTTCGATTCACTCTTATAGATTCACTTaGAGCTTTGTCTTTGACAGTAGAAGAGAAAGAAGA +
Preference number: 3 (lower is better)
Translates to: TDASSIHSYRFT*SFVFDSRRERR
Trigger: TCTTCTTTCTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAGATGCATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR TCA 72 bp AATATGCCAGTTCCACCAATTTCGTGCAGAATGCCTTaGATAGTTTTATATTCAGTAGGTTGGAGATTCTTT +
Preference number: 3 (lower is better)
Translates to: NMPVPPISCRMP*IVLYSVGWRFF
Trigger: AAAGAATCTCCAACCTACTGAATATAAAACTATTCAAGGCATTCTGCACGAAATTGGTGGAACTGGCATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CCA 72 bp ATCATTTTAATGTACCATGCGAGGCTTAAAACTTGTTaGCTAGTGCATATTGACACAATCTTCCAGATTATC +
Preference number: 3 (lower is better)
Translates to: IILMYHARLKTC*LVHIDTIFQII
Trigger: GATAATCTGGAAGATTGTGTCAATATGCACTAGCCAACAAGTTTTAAGCCTCGCATGGTACATTAAAATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCTCACCGTCCAGAGTCTaGGGTCACTGCCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSSPSRV*GHCLRQ
Trigger: CTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGA...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCGGCTGTTTCAAGCGCTaGTGGTCCTTCCGACACCAG +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSGCFKR*WSFRHQ
Trigger: CTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCCCTTTGGGACATCACTaGCAGAGACCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSPLGHH*QRPGLR
Trigger: TCTCAGCCCAGGTCTCTGTCAGTGATGTCCCAAAGG...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCCACCCTCTGGACCACTaGATTGCAAAGCCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSHPLDH*IAKPVD
Trigger: GTCAACCGGCTTTGCAATGCAGTGGTCCAGAGGGTG...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAGTTGTCGCTCAGACTaGAGCAGTCCCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSSCRSD*SSPQSL
Trigger: CAGGCTTTGGGGACTGCTGCAGTCTGAGCGACAACT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAACCACAGATTGCTCTaGTGGGCAGAGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSNHRLL*WAEPGE
Trigger: CTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTT...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTACAGGTACTGGAGCACTaGGGGAACCCACGTATTCCC +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVQVLEH*GNPRIP
Trigger: GGGAATACGTGGGTTCCCCCAGTGCTCCAGTACCTG...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCACGAAACCAGAAGACCTaGGAGATCTCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSRNQKT*EISVMM
Trigger: CATCATCACCGAGATCTCTCAGGTCTTCTGGTTTCG...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAACCAAGTCAATCCACTaGCAGATGTTCTGCGACACG +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSTKSIH*QMFCDT
Trigger: CGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGTACTGTCCAAGGGTTaGCATGTGCGTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVVLSKG*HVRLLL
Trigger: GAGGAGGAGACGCACATGGCAACCCTTGGACAGTAC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAAGGCTCGCTGGCTGTaGTGTCATAGCCAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSKARWL*CHSQKY
Trigger: ATACTTCTGGCTATGACAGCACAGCCAGCGAGCCTT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAGGAAGTGAAGCACAGTaGCGCTATTGGAATAGTGGG +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSGSEAQ*RYWNSG
Trigger: CCCACTATTCCAATAGCGGCACTGTGCTTCACTTCC...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCACACCCGATAGGATCTaGACACAAGTGCTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSTPDRI*TQVLLK
Trigger: CTTGAGCAGCACTTGTGTCCAGATCCTATCGGGTGT...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCTGGCTAGGGTTCTCTTaGCTCATTCTCCGTTGCATC +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSWLGFS*LILRCI
Trigger: GATGCAACGGAGAATGAGCCAAGAGAACCCTAGCCA...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 72 bp CCCACAGCAGCTGGAAGCTCTCCTTCAATATTGAGCTaGGCTCCAGGTCTGCTCACATGGGCCATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PTAAGSSPSILS*APGLLTWAMWN
Trigger: GTTCCACATGGCCCATGTGAGCAGACCTGGAGCCAAGCTCAATATTGAAGGAGAGCTTCCAGCTGCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAATACATGGCAGCATATaGCTTAAAGGCTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSIHGSI*LKGSLA
Trigger: AGCCAGCGAGCCTTTAAGTCATATGCTGCCATGTAT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAATGCCTCAGGTACATaGTTGACCGCACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSNASGT*LTALSP
Trigger: AGGAGAAAGTGCGGTCAATCATGTACCTGAGGCATT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCTCTTCAGTTACACTGTaGGCACTTGCAGTTCGGTTG +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSSSVTL*ALAVRL
Trigger: CAACCGAACTGCAAGTGCTCACAGTGTAACTGAAGA...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAGGAGGGATGCACTTGTaGCCACATAACTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSGGMHL*PHNFKA
Trigger: TGCTTTGAAGTTATGTGGTCACAAGTGCATCCCTCC...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTGGCAGAGACAGCTGTaGCAGGGCTTTTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVWQRQL*QGFCVP
Trigger: CGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGCTCCCTCAGGCTGGTTaGAGAAAGCCACGGAACAGA +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRLPQAG*RKPRNR
Trigger: TCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAG...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTACTAGTTCTGGCACCATaGAGACAAATGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVLVLAP*RQMARR
Trigger: CCTTCTGGCCATTTGTCTTCATGGTGCCAGAACTAG...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCATAAAAGGCCTCTTGTaGACCAACCTTAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSIKGLL*TNLSSV
Trigger: AACGGAGCTAAGGTTGGTTCACAAGAGGCCTTTTAT...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCACTCTCCTTCATATGGTaGAGCAGTAAAACCAGATGG +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSLSFIW*SSKTRW
Trigger: CCATCTGGTTTTACTGCTTCACCATATGAAGGAGAG...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTATCTGGACACAAGTGCTaGTCAAGGAAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVSGHKC*SRKPAV
Trigger: TACAGCAGGCTTCCTTGAGCAGCACTTGTGTCCAGA...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGGAACAAAGCTTCACCTaGTTTGTGGCAGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVEQSFT*FVAAAA
Trigger: GGCCGCAGCTGCCACAAACCAGGTGAAGCTTTGTTC...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGCTGCACGGGAGGCATaGGGTCATCTTCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILAAREA*GHLLWL
Trigger: GAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTACATTGCAAAGCCGGTTaGCATCGGTCAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVHCKAG*HRSEIH
Trigger: GTGAATTTCTGACCGATGTCAACCGGCTTTGCAATG...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTACGAAAGAGCATCCTTTaGATCAAAGCCACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVRKSIL*IKATGS
Trigger: AGAACCGGTGGCTTTGATTCAAAGGATGCTCTTTCG...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGGCTTTCAAATGCTCTaGGGCCTCGGGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILGFQML*GLGRNS
Trigger: GGAGTTCCTCCCGAGGCCTCAGAGCATTTGAAAGCC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAGCGGCTTCAGTAGCTaGAACTTCTTCCACATTTAT +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSSGFSS*NFFHIY
Trigger: ATAAATGTGGAAGAAGTTTCAGCTACTGAAGCCGCT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAGAAGCGATTCAGTTTaGGCAAGGGGAAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSRSDSV*ARGNFR
Trigger: TCGAAAATTTCCCCTTGCTCAAACTGAATCGCTTCT...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGGGTTCCAACTCTCCCTaGAGGCTCGAACTTTCAACT +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRGSNSP*RLELST
Trigger: AGTTGAAAGTTCGAGCCTTCAGGGAGAGTTGGAACC...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCACTCCATTTCTATTTCTaGTGGCGTGCTGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSLHFYF*WRAACK
Trigger: TTTACAAGCAGCACGCCATCAGAAATAGAAATGGAG...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAATGTCTGCTGCTTGGTaGATATGTTCAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVMSAAW*ICSGEG
Trigger: GCCTTCTCCTGAACATATGCACCAAGCAGCAGACAT...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCCATAGACCAAATGTCTaGTGCTTGGTGCATATGTTC +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSHRPNV*CLVHMF
Trigger: GAACATATGCACCAAGCAGCAGACATTTGGTCTATG...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAGTGTCTCTTCTAATTaGGCTAGTTGGTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSSVSSN*ASWSES
Trigger: TGACTCTGACCAACTAGCCCAATTAGAAGAGACACT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAGAAAAATCACCAGGCTaGGATGACAATTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSEKSPG*DDNSSA
Trigger: TGCAGAAGAATTGTCATCCCAGCCTGGTGATTTTTC...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGTCTACCCCATCATCCTaGGTTTCGCCATCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRSTPSS*VSPSSG
Trigger: TCCTGAAGATGGCGAAACCCAGGATGATGGGGTAGA...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGCTGTGGCTTCGCTaGAAGGAGGCCAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDVLWLR*KEANPF
Trigger: AAAGGGATTGGCCTCCTTCCAGCGAAGCCACAGCAC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGCTGCACGGGAGGCATaGGGTCATCTTCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFAAREA*GHLLWL
Trigger: GAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGCAGGTACTGGAGCACTaGGGGAACCCACGTATTCCC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILQVLEH*GNPRIP
Trigger: GGGAATACGTGGGTTCCCCCAGTGCTCCAGTACCTG...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCTACTGTCGGTGCTCATaGCCGAGCAGTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIYCRCS*PSSLSP
Trigger: TGGTGAAAGACTGCTCGGTCATGAGCACCGACAGTA...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGGCTTTCAAATGCTCTaGGGCCTCGGGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGGFQML*GLGRNS
Trigger: GGAGTTCCTCCCGAGGCCTCAGAGCATTTGAAAGCC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTATTTCTTCACAGCTACTaGGTTCAACAACCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVFLHSY*VQQPWQ
Trigger: TTGCCAGGGTTGTTGAACTCAGTAGCTGTGAAGAAA...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGCTCGGGGCATGGGTGTaGGTTGCCCCTCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLGAWV*VAPLCI
Trigger: AATACAAAGAGGGGCAACTCACACCCATGCCCCGAG...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCCTCGGGGCATGGGTGTaGGTTGCCCCTCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLGAWV*VAPLCI
Trigger: AATACAAAGAGGGGCAACTCACACCCATGCCCCGAG...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGTTTATGATCTGCTTTaGCCACTGGAAATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVVYDLL*PLEIPA
Trigger: TGCTGGGATTTCCAGTGGTCAAAGCAGATCATAAAC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCGCTCTCCTTCAATATTaGGCTTGGCTCCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIALLQY*AWLQVC
Trigger: GCAGACCTGGAGCCAAGCTCAATATTGAAGGAGAGC...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACTGGTTTGTGGCAGCTaGGGCCGCCGCGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADELVCGS*GRRALP
Trigger: GGGGAGTGCGCGGCGGCCGCAGCTGCCACAAACCAG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCATCACATAAGTTTCCCTaGAGTGTCTCTTCTAATTGG +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSSHKFP*SVSSNW
Trigger: CCAATTAGAAGAGACACTGCAGGGAAACTTATGTGA...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAACTGGATCTTCAACTaGAGAGACATCCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSNWIFN*RDIHSK
Trigger: TTTGGAATGGATGTCTCTGCAGTTGAAGATCCAGTT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGCTTGGCTCCAGGTCTaGTCACATGGGCCATGTGGA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFAWLQV*SHGPCG
Trigger: TCCACATGGCCCATGTGAGCAGACCTGGAGCCAAGC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGAACAAAGCTTCACCTaGTTTGTGGCAGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILEQSFT*FVAAAA
Trigger: GGCCGCAGCTGCCACAAACCAGGTGAAGCTTTGTTC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAGTTTAGCTTTGGGGTaGTCTTGTTTAGGAAACGAT +
Preference number: 4 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSSLALG*SCLGND
Trigger: ATCGTTTCCTAAACAAGACCACCCCAAAGCTAAACT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCTTTCTCCGTGGGGCTaGCTGAAGCAGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLSPWG*LKQTTG
Trigger: ACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGCTCAGGATTCACACCTaGCCTGAGCACACGGTGATC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLRIHT*PEHTVI
Trigger: GATCACCGTGTGCTCAGGCCAGGTGTGAATCCTGAG...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCCTCAGGATTCACACCTaGCCTGAGCACACGGTGATC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLRIHT*PEHTVI
Trigger: GATCACCGTGTGCTCAGGCCAGGTGTGAATCCTGAG...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAAACACAAAATCTTCCTaGACCTCCTGCAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVNTKSS*TSCSVF
Trigger: GAAAACACTGCAGGAGGTTCAGGAAGATTTTGTGTT...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGATCACCAGGCTGGGATaGCAATTCTTCTGCAGATTG +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVITRLG*QFFCRL
Trigger: CAATCTGCAGAAGAATTGTCATCCCAGCCTGGTGAT...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTACTCATCATTTGCCACTaGACGCATTTTCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVLIICH*THFHQK
Trigger: CTTCTGATGAAAATGCGTTCAGTGGCAAATGATGAG...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGTTCTCGGGTCTCCCTaGAAGCAAACTGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILVLGSP*KQTALA
Trigger: TGCTAGTGCAGTTTGCTTTCAGGGAGACCCGAGAAC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTGGTTTGTGGCAGCTaGGGCCGCCGCGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALVCGS*GRRALP
Trigger: GGGGAGTGCGCGGCGGCCGCAGCTGCCACAAACCAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTGGACTGGGGCTATGTaGCAAGATGAAAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILWTGAM*QDESSR
Trigger: TCGGCTGCTTTCATCTTGGCACATAGCCCCAGTCCA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGAGGATTTATGTACTCTaGACCTTCTGGTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRRIYVL*TFWSVA
Trigger: AGCGACAGACCAGAAGGTGCAGAGTACATAAATCCT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGGGACCTTCCTCCACTaGTGGAATGCCTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGGTFLH*WNASGT
Trigger: TGTACCTGAGGCATTCCAGCAGTGGAGGAAGGTCCC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCTTGCTTTCTCTCTTGTaGAGCGTGGGCTGGCGACAA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLLSLL*SVGWRQ
Trigger: TTGTCGCCAGCCCACGCTGCACAAGAGAGAAAGCAA...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTTGGGAGAGAGACACTaGCTGGGTGATATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLGERH*LGDICS
Trigger: GCTGCAGATATCACCCAGGCAGTGTCTCTCTCCCAA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCTCGCATTCACCCGGCTaGATAGCTGCTAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSHSPG*IAAKEG
Trigger: TCCTTCCTTAGCAGCTATGCAGCCGGGTGAATGCGA...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGCTTCACCTGGTTTGTaGCAGCTGCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSASPGL*QLRPPR
Trigger: GCGCGGCGGCCGCAGCTGCCACAAACCAGGTGAAGC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGGGCATTACAGATGTATaGTTGGGTCCACAAGCATAC +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRGITDV*LGPQAY
Trigger: GTATGCTTGTGGACCCAACCATACATCTGTAATGCC...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGATACTCCCTCAGGCTaGTTGGAGAAAGCCACGGAA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILDTPSG*LEKATE
Trigger: TTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGATGTTTCAAGCGCTGCTaGTCCTTCCGACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGCFKRC*SFRHQA
Trigger: TGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACA...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 72 bp CCTTCCGACACCAGGCAATCACGGTCCCATCACTGTTaGCTGTGTACAAATGGTGGCCATCACAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: PSDTRQSRSHHC*LCTNGGHHKKM
Trigger: CATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGAATCCATGGCTTGACTaGAGTAGAAGGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRNPWLD*SRRDLK
Trigger: CTTCAAATCCCTTCTACTTCAGTCAAGCCATGGATT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGGACTGCTTGATGCACTaGAACCTTCTGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVDCLMH*NLLFQT
Trigger: AGTCTGAAACAGAAGGTTTCAGTGCATCAAGCAGTC...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACCCTCAGGTACATGATTaGCCGCACTTTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDPQVHD*PHFLLK
Trigger: TTTCAGGAGAAAGTGCGGTCAATCATGTACCTGAGG...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGAGGAACTGCAAGCATaGATTGTAACTGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVEELQA*IVTAMK
Trigger: TTTCATAGCAGTTACAATTCATGCTTGCAGTTCCTC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGACCAAGTCAATCCACTaGCAGATGTTCTGCGACACG +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILTKSIH*QMFCDT
Trigger: CGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGCAGGATGAAAAACATTaGTCGCTTGAACAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRQDEKH*SLEQKP
Trigger: AGGCTTCTGTTCAAGCGATCAATGTTTTTCATCCTG...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGCAAGCCTTTTATCCATaGCAAAGGACTCGGATAGGT +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVQAFYP*QRTRIG
Trigger: ACCTATCCGAGTCCTTTGTCATGGATAAAAGGCTTG...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCAGGATGGCTGACCACTaGATGTCCGTACTGTTCATG +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILRMADH*MSVLFM
Trigger: CATGAACAGTACGGACATTCAGTGGTCAGCCATCCT...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACACCAAGGGTTGCCATGTaGGTCTCCTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTPRVAM*VSSSSS
Trigger: GGAAGAAGAGGAGGAGACGCACATGGCAACCCTTGG...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCAATCTTCAGATCCACTaGTGGGCAGGATCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIINLQIH*WAGSLE
Trigger: TTCAAGGGATCCTGCCCAGCAGTGGATCTGAAGATT...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTGCTTTCTCTCTTGTaGAGCGTGGGCTGGCGACAA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLLSLL*SVGWRQ
Trigger: TTGTCGCCAGCCCACGCTGCACAAGAGAGAAAGCAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGATTGGGAGAGAGACACTaGCTGGGTGATATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGLGERH*LGDICS
Trigger: GCTGCAGATATCACCCAGGCAGTGTCTCTCTCCCAA...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCGCAACTGGCAAAAACTaGCTAATTTTGAGATTCATT +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSATGKN*LILRFI
Trigger: AATGAATCTCAAAATTAGGCAGTTTTTGCCAGTTGC...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGCTTCACCTGGTTTGTaGCAGCTGCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFASPGL*QLRPPR
Trigger: GCGCGGCGGCCGCAGCTGCCACAAACCAGGTGAAGC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCTTTGACTGGGAAAGATaGTCCCTCATTTCAAATAAT +
Preference number: 4 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSFDWER*SLISNN
Trigger: ATTATTTGAAATGAGGGACCATCTTTCCCAGTCAAA...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGTCAATCACCTTTGACTaGGAAAGATGGTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRSITFD*ERWSLI
Trigger: AATGAGGGACCATCTTTCCCAGTCAAAGGTGATTGA...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTCTACCCCATCATCCTaGGTTTCGCCATCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSTPSS*VSPSSG
Trigger: TCCTGAAGATGGCGAAACCCAGGATGATGGGGTAGA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCGGATCAGCCCACACTTaGATCATCAACGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIGSAHT*IINALD
Trigger: ATCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCC...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCTAGAACGCAGCATATaGGCGGCCATCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLERSI*AAICCG
Trigger: TCCACAACAGATGGCCGCCCATATGCTGCGTTCTAG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGATAGCTGGTGATGGGTaGTTAACGAGGACCAAAAGT +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVIAGDG*LTRTKS
Trigger: ACTTTTGGTCCTCGTTAACCACCCATCACCAGCTAT...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCTCTCTTGTGCAGCGTaGGCTGGCGACAAAATATGC +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLSCAA*AGDKIC
Trigger: GCATATTTTGTCGCCAGCCCACGCTGCACAAGAGAG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGATGATCTCCCTGCAGTaGACATGTCCAACGAGATCC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILMISLQ*TCPTRS
Trigger: GGATCTCGTTGGACATGTCCACTGCAGGGAGATCAT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
3UTR CAA 72 bp TCTGTAAACGTCTCCTCTCTCGATTTGGCCCTTCTGTaGGATCCAACTGCCATGAGGTTGGATAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SVNVSSLDLALL*DPTAMRLDSRW
Trigger: CCATCTACTATCCAACCTCATGGCAGTTGGATCCAACAGAAGGGCCAAATCGAGAGAGGAGACGTTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGACTTTTGCAGAAACCTaGCTAGACAGGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILTFAET*LDRALP
Trigger: AGGAAGTGCCCTGTCTAGTCAGGTTTCTGCAAAAGT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGCGAAAGAGCATCCTTTaGATCAAAGCCACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILRKSIL*IKATGS
Trigger: AGAACCGGTGGCTTTGATTCAAAGGATGCTCTTTCG...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTTGCTCCCCTAGGCTaGTTATCAGAGTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDVAPLG*LSEFQM
Trigger: CATTTGAAACTCTGATAATCAGCCTAGGGGAGCAAC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCTAGTTCTGGCACCATaGAGACAAATGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLVLAP*RQMARR
Trigger: CCTTCTGGCCATTTGTCTTCATGGTGCCAGAACTAG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGATCCTCAGCTTCTTCTaGAAAATCACCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILILSFF*KITRLG
Trigger: TCCCAGCCTGGTGATTTTTCAGAAGAAGCTGAGGAT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACCAGCTCAGGATGGCTaGCCACTGAATGTCCGTACT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIPAQDG*PLNVRT
Trigger: AGTACGGACATTCAGTGGTCAGCCATCCTGAGCTGG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATCACCGTCCAGAGTCTaGGGTCACTGCCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADESPSRV*GHCLRQ
Trigger: CTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAGTTGTCGCTCAGACTaGAGCAGTCCCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISCRSD*SSPQSL
Trigger: CAGGCTTTGGGGACTGCTGCAGTCTGAGCGACAACT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGATTAGGGCTTTCAAATaGTCTGAGGCCTCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQIRAFK*SEASGG
Trigger: TCCTCCCGAGGCCTCAGAGCATTTGAAAGCCCTAAT...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACACTGCTCAAGGAAGCCTaGTGTAGTAAGCGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTLLKEA*CSKRKH
Trigger: GTGCTTGCGCTTACTACAGCAGGCTTCCTTGAGCAG...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTATTCACAAACAGTTTTTaGAGACTCACAGCTACTGAT +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVFTNSF*RLTATD
Trigger: ATCAGTAGCTGTGAGTCTGCAAAAACTGTTTGTGAA...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGACCAAAAGTGTATCTaGTTGAATAAGCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVDQKCI*LNKLVH
Trigger: ATGGACAAGCTTATTCAAGCAGATACACTTTTGGTC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGACCGCTTTTGAACTACTaGATGATGGGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGPLLNY*MMGSRR
Trigger: CCTTCTGCTCCCCATCATGCAGTAGTTCAAAAGCGG...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGAGAAATCCTCGACCATaGACAAGGTACTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILRNPRP*TRYCPR
Trigger: CCTTGGACAGTACCTTGTCCATGGTCGAGGATTTCT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCCACCATGAAGACAAATaGCCAGAAGGGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIHHEDK*PEGLPK
Trigger: TTTTGGAAGCCCTTCTGGCCATTTGTCTTCATGGTG...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCATCTGCTTTGACCACTaGAAATCCCAGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILICFDH*KSQHSL
Trigger: AAGGGAGTGCTGGGATTTCCAGTGGTCAAAGCAGAT...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGGTCAGCAAGTATAAATaGGAACACAGGATACTGCAT +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRVSKYK*EHRILH
Trigger: ATGCAGTATCCTGTGTTCCCATTTATACTTGCTGAC...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGGCACAGTGCCGCTATTaGAATAGTGGGAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQAQCRY*NSGSHS
Trigger: ACTATGGCTCCCACTATTCCAATAGCGGCACTGTGC...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCCAACCCCACAGCAGCTaGAAGCTCTCCTTCAATATT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILQPHSS*KLSFNI
Trigger: AATATTGAAGGAGAGCTTCCAGCTGCTGTGGGGTTG...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGGCAGACCACAGGTACTaGAGCACTGGGGGAACCCAC +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEADHRY*STGGTH
Trigger: GTGGGTTCCCCCAGTGCTCCAGTACCTGTGGTCTGC...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATACTGTCGGTGCTCATaGCCGAGCAGTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIYCRCS*PSSLSP
Trigger: TGGTGAAAGACTGCTCGGTCATGAGCACCGACAGTA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGAAAAGTCGTATACTTTaGAGTGAGGTCTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRKSRIL*SEVSLS
Trigger: AGAAAGTGAGACCTCACTTCAAAGTATACGACTTTT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCATGTTCAAAATCTGCTaGATAATTCCCGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIMFKIC*IIPEGN
Trigger: GTTGCCCTCGGGAATTATTCAGCAGATTTTGAACAT...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCTCTTTCTTGCTCCGTaGAACTCGTGCTCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLFLAP*NSCSSQ
Trigger: TTGAGAAGAGCACGAGTTTCACGGAGCAAGAAAGAG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGCTCTGAACTTCTTTTaGGCTGAAGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILALNFF*AEGSLR
Trigger: TCTCAAAGACCCTTCAGCTCAAAAGAAGTTCAGAGC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGCTCCCAACTGTTTATaGTCTGCTTTGACCACTGGA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFAPNCL*SALTTG
Trigger: TCCAGTGGTCAAAGCAGATCATAAACAGTTGGGAGC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGGTCAATTCACCTTGGTaGTTATGTATCAACTCTGAC +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVVNSPW*LCINSD
Trigger: GTCAGAGTTGATACATAATCACCAAGGTGAATTGAC...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCATATGTCCAGGAAAATaGTGCTGGTTCCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILICPGK*CWFQLS
Trigger: GGAGAGTTGGAACCAGCATCATTTTCCTGGACATAT...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCTCCGTGGGGCTGGCTaGAGCAGACCACAGGTACTG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLRGAG*SRPQVL
Trigger: CAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTCCGTGGGGCTGGCTaGAGCAGACCACAGGTACTG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALRGAG*SRPQVL
Trigger: CAGTACCTGTGGTCTGCTTCAGCCAGCCCCACGGAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATGGCAGAGACAGCTGTaGCAGGGCTTTTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLWQRQL*QGFCVP
Trigger: CGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAAGTAGCAATATCACCTaGGGTTTCACTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGSSNIT*GFTGRD
Trigger: GTCTCTGCCAGTGAAACCTCAGGTGATATTGCTACT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGATTACTGAGCTTATCTaGCAGTGTTTTCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRITELI*QCFQSQ
Trigger: TTGGCTTTGAAAACACTGTCAGATAAGCTCAGTAAT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTTCTTCGGTCCAACCTaGAGAAACTACTCGACTCTC +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQFFGPT*RNYSTL
Trigger: GAGAGTCGAGTAGTTTCTGCAGGTTGGACCGAAGAA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGATTGCTTTCACTATCTaGTTCGTAACCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRIAFTI*FVTFFF
Trigger: GAAGAAGAAGGTTACGAAGCAGATAGTGAAAGCAAT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGAGGATTTATGTACTCTaGACCTTCTGGTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILRIYVL*TFWSVA
Trigger: AGCGACAGACCAGAAGGTGCAGAGTACATAAATCCT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGAGTAGTCTCCCAAGCTaGATTCGGAAGGTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQSSLPS*IRKVSL
Trigger: TAAGGAGACCTTCCGAATGCAGCTTGGGAGACTACT...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGCCAACAGGAGTGTTCTaGCATTTGTTAGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRPTGVF*HLLERF
Trigger: AAATCTTTCTAACAAATGGCAGAACACTCCTGTTGG...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGCTTGGCTCCAGGTCTaGTCACATGGGCCATGTGGA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGAWLQV*SHGPCG
Trigger: TCCACATGGCCCATGTGAGCAGACCTGGAGCCAAGC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACAGGTCCCATCACTGTTTaGTGTGTACAAATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTGPITV*CVQMVA
Trigger: GGCCACCATTTGTACACAGCAAACAGTGATGGGACC...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGAAGAAAATTCTTCCTaGAGATTAGATCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVEENSS*RLDQMP
Trigger: AGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGCATACATGGCCACGTaGTTTCTCTCGAATCTATCT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILAYMAT*FLSNLS
Trigger: AGATAGATTCGAGAGAAAGCACGTGGCCATGTATGC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACTGGCCTCCACCCTCTaGACCACTGCATTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLLASTL*TTALQS
Trigger: GCTTTGCAATGCAGTGGTCCAGAGGGTGGAGGCCAG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCGTTGCCTTTTCTTCTTaGACAGGTATCTTCCATACC +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIVAFSS*TGIFHT
Trigger: GGTATGGAAGATACCTGTCCAAGAAGAAAAGGCAAC...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGAAACTCTCAAATACATaGGCAAGCACATCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRKLSNT*ASTSSL
Trigger: CAAACTTGATGTGCTTGCCCATGTATTTGAGAGTTT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCCAGCAACGGCAGGTaGACTGGGGCTATGTGCCAA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPSNGR*TGAMCQ
Trigger: TTGGCACATAGCCCCAGTCCACCTGCCGTTGCTGGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGGAGTAGTCATTGACTaGCTTGCCATACTTACATGG +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILGVVID*LAILTW
Trigger: CCATGTAAGTATGGCAAGCCAGTCAATGACTACTCC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAAGTTCGGTTGTAATTTaGCTCATAACCAAGAGAATA +
Preference number: 4 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVSSVVI*LITKRI
Trigger: TATTCTCTTGGTTATGAGCCAAATTACAACCGAACT...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACTCTCTTGTGCAGCGTaGGCTGGCGACAAAATATGC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILSCAA*AGDKIC
Trigger: GCATATTTTGTCGCCAGCCCACGCTGCACAAGAGAG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGAATACAAAACTAACTTaGCTCCATGTTGTAGGGATG +
Preference number: 4 (lower is better)
Translates to: TINPGLIRDLPPLLECLRNTKLT*LHVVGM
Trigger: CATCCCTACAACATGGAGCCAAGTTAGTTTTGTATT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGGAGAGAGACACTGCCTaGGTGATATCTGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQERDTA*VISAAI
Trigger: AATAGCTGCAGATATCACCCAGGCAGTGTCTCTCTC...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGAGCTGTCTCTCTAGATaGTGCAACACTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSCLSR*CNTDAS
Trigger: AGATGCATCAGTGTTGCACCATCTAGAGAGACAGCT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCAGCTGTCTCTCTAGATaGTGCAACACTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSCLSR*CNTDAS
Trigger: AGATGCATCAGTGTTGCACCATCTAGAGAGACAGCT...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTCTAGAGCCTGCCGATaGATGAGGATAAAAAGACGA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSRACR*MRIKRR
Trigger: TCGTCTTTTTATCCTCATCCATCGGCAGGCTCTAGA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACTTTCTCCGTGGGGCTaGCTGAAGCAGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLLSPWG*LKQTTG
Trigger: ACCTGTGGTCTGCTTCAGCCAGCCCCACGGAGAAAG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR CAA 72 bp AGTTTTCCCAATCATCAGTGTTTCTATCAACAAGACTaGGCCAACGGCCAACAGCTGCAGATCCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SFPNHQCFYQQD*ANGQQLQIRSV
Trigger: CACAGAACGGATCTGCAGCTGTTGGCCGTTGGCCAAGTCTTGTTGATAGAAACACTGATGATTGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGCAACAGATCAGAATCTaGAGAACTCCTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILQQIRI*RTPSKS
Trigger: GCTTTTGGAAGGAGTTCTTCAGATTCTGATCTGTTG...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACGAAACCAGAAGACCTaGGAGATCTCGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIRNQKT*EISVMM
Trigger: CATCATCACCGAGATCTCTCAGGTCTTCTGGTTTCG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCCATATTCCAATGTTATaGACACCCGATAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILHIPML*TPDRIW
Trigger: CCAGATCCTATCGGGTGTTCATAACATTGGAATATG...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGAGGTCTCACTTTCTTaGCTTGTAAATAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDEVSLS*LVNSFA
Trigger: AGCAAAGCTATTTACAAGTCAAGAAAGTGAGACCTC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTGTTTCAATCACCTTTaGCTGGGAAAGATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQCFNHL*LGKMVP
Trigger: AGGGACCATCTTTCCCAGTCAAAGGTGATTGAAACA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGCTGCTGTAAGTAGGTaGGTACTAAATGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILAAVSR*VLNVAI
Trigger: AATGGCAACATTTAGTACTCACCTACTTACAGCAGC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTATAATTTTCACAAATaGTCTACAAACCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVYNFHK*STNLSG
Trigger: CCCCGAGAGGTTTGTAGATCATTTGTGAAAATTATA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACCTTTGGGACATCACTaGCAGAGACCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLPLGHH*QRPGLR
Trigger: TCTCAGCCCAGGTCTCTGTCAGTGATGTCCCAAAGG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACAGCTCCCAACTGTTTATaGTCTGCTTTGACCACTGGA +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTAPNCL*SALTTG
Trigger: TCCAGTGGTCAAAGCAGATCATAAACAGTTGGGAGC...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCAGGTTTTCAGAGTCATaGTTTGCGGTGGTCCTTATA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILRFSES*FAVVLI
Trigger: TATAAGGACCACCGCAAATCATGACTCTGAAAACCT...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCACCCGTTCACCATTCTaGCGCACACCAAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFTRSPF*RTPKSK
Trigger: TTTTGATTTTGGTGTGCGTCAGAATGGTGAACGGGT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAACCCGTTCACCATTCTaGCGCACACCAAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGTRSPF*RTPKSK
Trigger: TTTTGATTTTGGTGTGCGTCAGAATGGTGAACGGGT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATCTAGCGCTCGTCTCTaGACTGGATCTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISSARL*TGSSTA
Trigger: TGCAGTTGAAGATCCAGTTCAGAGACGAGCGCTAGA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAGGATGGCTGACCACTaGATGTCCGTACTGTTCATG +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIRMADH*MSVLFM
Trigger: CATGAACAGTACGGACATTCAGTGGTCAGCCATCCT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGCCTGAGCACACGGTaGTCTAAATGCAGCCTAGGT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGLSTR*SKCSLG
Trigger: ACCTAGGCTGCATTTAGATCACCGTGTGCTCAGGCC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGGGCCTGAGCACACGGTaGTCTAAATGCAGCCTAGGT +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEGLSTR*SKCSLG
Trigger: ACCTAGGCTGCATTTAGATCACCGTGTGCTCAGGCC...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGTACTGTCCAAGGGTTaGCATGTGCGTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGVLSKG*HVRLLL
Trigger: GAGGAGGAGACGCACATGGCAACCCTTGGACAGTAC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTCTACTGACAGAAGATaGAACACTGTTCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSTDRR*NTVRKS
Trigger: GCTCTTTCGAACAGTGTTGCATCTTCTGTCAGTAGA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGGGCACACACTGCAATaGAACAGCACCGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGGHTLQ*NSTAQD
Trigger: ATCCTGAGCGGTGCTGTTGCATTGCAGTGTGTGCCC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACTGATGGGCACACACTaGAATGCAACAGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLLMGTH*NATAPL
Trigger: GAGCGGTGCTGTTGCATTGCAGTGTGTGCCCATCAG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATGTGGCCAGCAGTTTTaGCCCAGCAACGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISACGQQF*PSNGRW
Trigger: CCACCTGCCGTTGCTGGGGCAAAACTGCTGGCCACA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGTTCCTGCCAATGTCTaGTGGCACTCAAATCTACTT +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGVPANV*WHSNLL
Trigger: AAGTAGATTTGAGTGCCAGCAGACATTGGCAGGAAC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGAAGCCTTCCCCTTTTaGTTATACCCAAACACCAAG +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFEAFPF*LYPNTK
Trigger: CTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGGAAGCCTTCCCCTTTTaGTTATACCCAAACACCAAG +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQEAFPF*LYPNTK
Trigger: CTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTC...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCTCACACCTTGTTCCTTaGTATATGTCATCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIISHLVP*YMSSED
Trigger: GTCTTCTGATGACATATAGCAAGGAACAAGGTGTGA...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGGTCCCATCACTGTTTaGTGTGTACAAATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIGPITV*CVQMVA
Trigger: GGCCACCATTTGTACACAGCAAACAGTGATGGGACC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACCTTTTTCATCTGAATTaGCTTCTGAATCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDLFHLN*LLNLRW
Trigger: CCACCTCAGATTCAGAAGCCAATTCAGATGAAAAAG...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACTTCAGATCCACTGCTaGGCAGGATCCCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILQIHC*AGSLEI
Trigger: GATTTCAAGGGATCCTGCCCAGCAGTGGATCTGAAG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTCAATCACCTTTGACTaGGAAAGATGGTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSITFD*ERWSLI
Trigger: AATGAGGGACCATCTTTCCCAGTCAAAGGTGATTGA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGAAAAATCACCAGGCTaGGATGACAATTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILEKSPG*DDNSSA
Trigger: TGCAGAAGAATTGTCATCCCAGCCTGGTGATTTTTC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGCTTGCCATACTTACATaGCATTACAGATGTATGGTT +
Preference number: 4 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVLAILT*HYRCMV
Trigger: AACCATACATCTGTAATGCCATGTAAGTATGGCAAG...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGTAATCAGGTCGGCGTaGGCAGGACTCATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFVIRSA*AGLIPR
Trigger: CCTGGGGATGAGTCCTGCCCACGCCGACCTGATTAC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGTGCTGTGGCTTCGCTaGAAGGAGGCCAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGVLWLR*KEANPF
Trigger: AAAGGGATTGGCCTCCTTCCAGCGAAGCCACAGCAC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGAAGATACAACTGGTTaGCTAGCAAGGAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILEDTTG*LARKIH
Trigger: GTGGATTTTCCTTGCTAGCCAACCAGTTGTATCTTC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACATCTCCTCTCTCGATTTaGCCCTTCTGTTGGATCCAA +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTSPLSI*PFCWIQ
Trigger: TTGGATCCAACAGAAGGGCCAAATCGAGAGAGGAGA...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGCAGACCACAGGTACTaGAGCACTGGGGGAACCCAC +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAADHRY*STGGTH
Trigger: GTGGGTTCCCCCAGTGCTCCAGTACCTGTGGTCTGC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACCAAATCTTTCTCCGTaGGGCTGGCTGAAGCAGACC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLPNLSP*GWLKQT
Trigger: GGTCTGCTTCAGCCAGCCCCACGGAGAAAGATTTGG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAAACCACAGATTGCTCTaGTGGGCAGAGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLNHRLL*WAEPGE
Trigger: CTCTCCAGGCTCTGCCCACCAGAGCAATCTGTGGTT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAATCCCCAGCTCAGGATaGCTGACCACTGAATGTCCG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLIPSSG*LTTECP
Trigger: CGGACATTCAGTGGTCAGCCATCCTGAGCTGGGGAT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATGTTTCAAGCGCTGCTaGTCCTTCCGACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGCFKRC*SFRHQA
Trigger: TGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGAAGGAATAGAACATTaGCTGTTTCAAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGEGIEH*LFQALL
Trigger: CAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAATCTCTGCACCTCCATaGACCTCAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIISAPP*TSGFTP
Trigger: AGGTGTGAATCCTGAGGTCCATGGAGGTGCAGAGAT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGACATGGAGCAAAGGAATaGTTACAGATTTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGHGAKE*LQIWDP
Trigger: TGGATCCCAAATCTGTAATCATTCCTTTGCTCCATG...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAATCCTCAGCTTCTTCTaGAAAATCACCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIILSFF*KITRLG
Trigger: TCCCAGCCTGGTGATTTTTCAGAAGAAGCTGAGGAT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGCTGCTGTAAGTAGGTaGGTACTAAATGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGAAVSR*VLNVAI
Trigger: AATGGCAACATTTAGTACTCACCTACTTACAGCAGC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACGCAGTGCTAATGCTTaGGTTTCTTCACAGCTACTG +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIRSANA*VSSQLL
Trigger: CAGTAGCTGTGAAGAAACTCAAGCATTAGCACTGCG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAATGACAGACCACTTCTaGAACAATCCCATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGMTDHF*NNPMFL
Trigger: GAGAAACATGGGATTGTTTCAGAAGTGGTCTGTCAT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGTCAATTCACCTTGGTaGTTATGTATCAACTCTGAC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILVNSPW*LCINSD
Trigger: GTCAGAGTTGATACATAATCACCAAGGTGAATTGAC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTTGGATCCAACTGCCATaGGGTTGGATAGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPWIQLP*GWIVDG
Trigger: CCCATCTACTATCCAACCTCATGGCAGTTGGATCCA...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAATCCTGACCAGGAAGTaGAGCACAGTGCCGCTATTG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLILTRK*STVPLL
Trigger: CAATAGCGGCACTGTGCTTCACTTCCTGGTCAGGAT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGATCCTGACCAGGAAGTaGAGCACAGTGCCGCTATTG +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEILTRK*STVPLL
Trigger: CAATAGCGGCACTGTGCTTCACTTCCTGGTCAGGAT...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCAGGATGAAAAACATTaGTCGCTTGAACAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFQDEKH*SLEQKP
Trigger: AGGCTTCTGTTCAAGCGATCAATGTTTTTCATCCTG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCAAGACAGAAATTCCGTaGCAAACCACAGATTGCTCT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFKTEIP*QTTDCS
Trigger: AGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCAGCTCAGGATGGCTaGCCACTGAATGTCCGTACT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPAQDG*PLNVRT
Trigger: AGTACGGACATTCAGTGGTCAGCCATCCTGAGCTGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGTGCTTTGGAGAACGTaGAGTTCATTCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIVLWRT*SSFAFT
Trigger: GGTGAATGCGAATGAACTTCACGTTCTCCAAAGCAC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGATTCACACCTGGCCTaGGCACACGGTGATCTAAAT +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPDSHLA*AHGDLN
Trigger: ATTTAGATCACCGTGTGCTCAGGCCAGGTGTGAATC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCCAAATCACTTCAACGTaGATAGGAGTAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIQITST*IGVISS
Trigger: AGATGAGATTACTCCTATTCACGTTGAAGTGATTTG...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCACCCTCTGGACCACTaGATTGCAAAGCCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSHPLDH*IAKPVD
Trigger: GTCAACCGGCTTTGCAATGCAGTGGTCCAGAGGGTG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCCAAGGGTTGCCATGTaGGTCTCCTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSPRVAM*VSSSSS
Trigger: GGAAGAAGAGGAGGAGACGCACATGGCAACCCTTGG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGCAAAAGGGTCAGGCTaGTTTTCTAGGCATATTCTA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFAKGSG*FSRHIL
Trigger: TAGAATATGCCTAGAAAAGCAGCCTGACCCTTTTGC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGGCAAAAGGGTCAGGCTaGTTTTCTAGGCATATTCTA +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQAKGSG*FSRHIL
Trigger: TAGAATATGCCTAGAAAAGCAGCCTGACCCTTTTGC...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTTTCTTTTGTCTTGGTaGAAAAGGGTCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQFLLSW*KRVRLL
Trigger: AAGCAGCCTGACCCTTTTGCACCAAGACAAAAGAAA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCTGATGGGCACACACTaGAATGCAACAGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLMGTH*NATAPL
Trigger: GAGCGGTGCTGTTGCATTGCAGTGTGTGCCCATCAG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTCACATAAGTTTCCCTaGAGTGTCTCTTCTAATTGG +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSHKFP*SVSSNW
Trigger: CCAATTAGAAGAGACACTGCAGGGAAACTTATGTGA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCATAGACCAAATGTCTaGTGCTTGGTGCATATGTTC +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFHRPNV*CLVHMF
Trigger: GAACATATGCACCAAGCAGCAGACATTTGGTCTATG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGCCAAACACCTTGCTCTaGTTTACTCCATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQPNTLL*FTPYLP
Trigger: TGGAAGATATGGAGTAAAGCAGAGCAAGGTGTTTGG...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGCATGGGTGTGAGTTaGCCCTCTTTGTATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGMGVS*PSLYSC
Trigger: GCAGGAATACAAAGAGGGGCAACTCACACCCATGCC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGGGCATGGGTGTGAGTTaGCCCTCTTTGTATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEGMGVS*PSLYSC
Trigger: GCAGGAATACAAAGAGGGGCAACTCACACCCATGCC...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGGGACCTTCCTCCACTaGTGGAATGCCTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSGTFLH*WNASGT
Trigger: TGTACCTGAGGCATTCCAGCAGTGGAGGAAGGTCCC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGATACACTGTGAGCACTTaGAGTTCGGTTGTAATTTGG +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGYTVST*SSVVIW
Trigger: CCAAATTACAACCGAACTGCAAGTGCTCACAGTGTA...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTTCGAGGACCAGCAATaGTTTTCCGCTTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQFEDQQ*FSAFEL
Trigger: TAGTTCAAAAGCGGAAAAGCATTGCTGGTCCTCGAA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAGTAGTCTCCCAAGCTaGATTCGGAAGGTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISSLPS*IRKVSL
Trigger: TAAGGAGACCTTCCGAATGCAGCTTGGGAGACTACT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGCTGGCGACAAAATATaGACTAGTAGTCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIAGDKI*TSSLPS
Trigger: GCTTGGGAGACTACTAGTGCATATTTTGTCGCCAGC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGGCTGTTTCAAGCGCTaGTGGTCCTTCCGACACCAG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAGCFKR*WSFRHQ
Trigger: CTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGCCCATGCAAACTTCTTaGATACTGAAGGCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILPMQTS*ILKAFY
Trigger: ATAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGG...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGTACTCTCAGCTTCATaGATACACTCCACATTAAAC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILVLSAS*IHSTLN
Trigger: GTTTAATGTGGAGTGTATCCATGAAGCTGAGAGTAC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAATCTGCTTTGACCACTaGAAATCCCAGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIICFDH*KSQHSL
Trigger: AAGGGAGTGCTGGGATTTCCAGTGGTCAAAGCAGAT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCCATCATCACGAACCTTaGTGTTATCAAATGCCAACA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILHHHEP*CYQMPT
Trigger: TGTTGGCATTTGATAACACCAAGGTTCGTGATGATG...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAATCCCCAGCTCAGGATaGCTGACCACTGAATGTCCG +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEIPSSG*LTTECP
Trigger: CGGACATTCAGTGGTCAGCCATCCTGAGCTGGGGAT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACTTTGCTGTGTACAAATaGTGGCCATCACAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDFAVYK*WPSQEN
Trigger: ATTTTCTTGTGATGGCCACCATTTGTACACAGCAAA...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACAGACAGCCATCATATaGGAGAGACAGACGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGQTAII*ERQTAP
Trigger: TGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGTACTCTGCACCTTCTaGTCTGTCGCTCTTGTACAA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIVLCTF*SVALVQ
Trigger: TTGTACAAGAGCGACAGACCAGAAGGTGCAGAGTAC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 72 bp CTTACAATTCCATTTTCTAATCCCCCAGCGATTACATaGATAGATACTCCCTCAGGCTGGTTGGAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LTIPFSNPPAIT*IDTPSGWLEKA
Trigger: GGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGTTGCTCCCCTAGGCTaGTTATCAGAGTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIVAPLG*LSEFQM
Trigger: CATTTGAAACTCTGATAATCAGCCTAGGGGAGCAAC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTGGATAAGCTTCTTTaGGGCCAGCATAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLDKLL*GQHKIC
Trigger: GCAAATTTTATGCTGGCCTCAAAGAAGCTTATCCAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGCCAGAAGTATCTTCTaGGTCATTGGCCGACTCCCT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSARSIF*VIGRLP
Trigger: AGGGAGTCGGCCAATGACTCAGAAGATACTTCTGGC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTATTTCCCCTTGAGTaGGGTTTTCGAGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLFPLE*GFRVSH
Trigger: ATGACTTACTCGAAAACCTCACTCAAGGGGAAATAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGCTCTGAACTTCTTTTaGGCTGAAGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIALNFF*AEGSLR
Trigger: TCTCAAAGACCCTTCAGCTCAAAAGAAGTTCAGAGC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTATAATTTTCACAAATaGTCTACAAACCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILYNFHK*STNLSG
Trigger: CCCCGAGAGGTTTGTAGATCATTTGTGAAAATTATA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACAACTGGAGTGAATCTGTaGGGTTTTCAGAGTCATGAT +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTTGVNL*GFQSHD
Trigger: ATCATGACTCTGAAAACCTCACAGATTCACTCCAGT...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGTTGTAGGGATGGGCTaGGACAGTCTCGTAGTATTT +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPVVGMG*DSLVVF
Trigger: AAATACTACGAGACTGTCTCAGCCCATCCCTACAAC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATGGATCCAACTGCCATaGGGTTGGATAGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLWIQLP*GWIVDG
Trigger: CCCATCTACTATCCAACCTCATGGCAGTTGGATCCA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCAAGAGAGTGGTGGTTTaGCAACATCTTCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFKRVVV*QHLLIS
Trigger: AGAAATCAGAAGATGTTGTCAAACCACCACTCTCTT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAATATGTCCAGGAAAATaGTGCTGGTTCCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIICPGK*CWFQLS
Trigger: GGAGAGTTGGAACCAGCATCATTTTCCTGGACATAT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGGGGGAAGGTTGACGTaGTTAACCCGTTCACCATTC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSGGRLT*LTRSPF
Trigger: GAATGGTGAACGGGTTAATCACGTCAACCTTCCCCC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGTTCTCGGGTCTCCCTaGAAGCAAACTGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEVLGSP*KQTALA
Trigger: TGCTAGTGCAGTTTGCTTTCAGGGAGACCCGAGAAC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTACAGAGGCACCTACTaGATAATTTGCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFYRGTY*IICFSK
Trigger: CTTTGAGAAGCAAATTATTCAGTAGGTGCCTCTGTA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAATTAGGGCTTTCAAATaGTCTGAGGCCTCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLIRAFK*SEASGG
Trigger: TCCTCCCGAGGCCTCAGAGCATTTGAAAGCCCTAAT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGGGCACACACTGCAATaGAACAGCACCGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFGHTLQ*NSTAQD
Trigger: ATCCTGAGCGGTGCTGTTGCATTGCAGTGTGTGCCC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGCCTCCACTGCTGGAATaGCTCAGGTACATGATTGAC +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEPPLLE*LRYMID
Trigger: GTCAATCATGTACCTGAGGCATTCCAGCAGTGGAGG...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGACTGCTATGAAAAGTTaGTGTATATCACAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILTAMKS*CISQAS
Trigger: GCTTGCTTGTGATATACAGCAACTTTTCATAGCAGT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGGGGTCATACCATACTaGTCTATCATGTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPGVIPY*SIMCQL
Trigger: CAGCTGACACATGATAGAGCAGTATGGTATGACCCC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCTCTTATAGATTCACTTaGAGCTTTGTCTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: HTRKIRVALWGSAHTWIISYRFT*SFVFDS
Trigger: ACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGA...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATCAGACTCTAGAGCCTaGCGATGGATGAGGATAAAA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISDSRA*RWMRIK
Trigger: TTTTATCCTCATCCATCGGCAGGCTCTAGAGTCTGA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCAACTGGATCTTCAACTaGAGAGACATCCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFNWIFN*RDIHSK
Trigger: TTTGGAATGGATGTCTCTGCAGTTGAAGATCCAGTT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATGCAGGTTCCGTCTCTaGTCACACTTATCAGTATAC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIICRFRL*SHLSVY
Trigger: GTATACTGATAAGTGTGAGCAGAGACGGAACCTGCA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCCCATGCAAACTTCTTaGATACTGAAGGCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFPMQTS*ILKAFY
Trigger: ATAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCTTTTTCATCTGAATTaGCTTCTGAATCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLFHLN*LLNLRW
Trigger: CCACCTCAGATTCAGAAGCCAATTCAGATGAAAAAG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTCTAATTGGGCTAGTTaGTCAGAGTCAACAGTACAA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFSNWAS*SESTVQ
Trigger: TTGTACTGTTGACTCTGACCAACTAGCCCAATTAGA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGACTTAAAGGCTCGCTaGCTGTGCTGTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSDLKAR*LCCHSQ
Trigger: CTGGCTATGACAGCACAGCCAGCGAGCCTTTAAGTC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAATAAGAGTGGCATTGTaGGGATCAGCCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGIRVAL*GSAHTW
Trigger: CCAAGTGTGGGCTGATCCCCACAATGCCACTCTTAT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTACAGATGTATGGTTaGGTCCACAAGCATACAGAT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLQMYG*VHKHTD
Trigger: ATCTGTATGCTTGTGGACCCAACCATACATCTGTAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGGAGTAGTCATTGACTaGCTTGCCATACTTACATGG +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIGVVID*LAILTW
Trigger: CCATGTAAGTATGGCAAGCCAGTCAATGACTACTCC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATCCCAGCACTCCCTTTaGGACATCACTGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADESQHSL*DITDRD
Trigger: GTCTCTGTCAGTGATGTCCCAAAGGGAGTGCTGGGA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCTTGCAATAGTGCTGTaGCTTCGCTGGAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLAIVL*LRWKEA
Trigger: GGCCTCCTTCCAGCGAAGCCACAGCACTATTGCAAG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGGAGCAGAAGGTGACTaGAGTGAATCTGTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPGAEGD*SESVRF
Trigger: AAACCTCACAGATTCACTCCAGTCACCTTCTGCTCC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATGGCTAGGGTTCTCTTaGCTCATTCTCCGTTGCATC +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGWLGFS*LILRCI
Trigger: GATGCAACGGAGAATGAGCCAAGAGAACCCTAGCCA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGTCCGTTTCAGTTGCTTaGCTAGGGTTCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEESVSVA*LGFSWL
Trigger: GAGCCAAGAGAACCCTAGCCAAGCAACTGAAACGGA...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAAAACAGGTAAGAGAGTaGTGGTTTGACAACATCTTC +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGKQVRE*WFDNIF
Trigger: GAAGATGTTGTCAAACCACCACTCTCTTACCTGTTT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACTTCCAGTAAACAGCTaGCAACTGTCAGGCACCCAA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLPVNS*QLSGTQ
Trigger: TTGGGTGCCTGACAGTTGCCAGCTGTTTACTGGAAG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCTCCCTCAGGCTGGTTaGAGAAAGCCACGGAACAGA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLPQAG*RKPRNR
Trigger: TCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGCTGTGTACAAATGGTaGCCATCACAAGAAAATGTA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFAVYKW*PSQENV
Trigger: TACATTTTCTTGTGATGGCCACCATTTGTACACAGC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGACTTTATCATTATTTaGATGGTTTGTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDDFIII*MVCPVI
Trigger: GATGACTGGACAAACCATCCAAATAATGATAAAGTC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACAGACAGCCATCATATaGGAGAGACAGACGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEQTAII*ERQTAP
Trigger: TGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAATCTCTGCACCTCCATaGACCTCAGGATTCACACCT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGISAPP*TSGFTP
Trigger: AGGTGTGAATCCTGAGGTCCATGGAGGTGCAGAGAT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR CAA 72 bp CAGTTACACTGTGAGCACTTGCAGTTCGGTTGTAATTaGGCTCATAACCAAGAGAATAGGCAAAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QLHCEHLQFGCN*AHNQENRQSFP
Trigger: GGGAAAACTTTGCCTATTCTCTTGGTTATGAGCCAAATTACAACCGAACTGCAAGTGCTCACAGTGTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 72 bp TCATTCTCCGTTGCATCATCACATGAAGCTCATCATTaGCCACTGAACGCATTTTCATCAGAAGCGATTCAG +
Preference number: 4 (lower is better)
Translates to: SFSVASSHEAHH*PLNAFSSEAIQ
Trigger: CTGAATCGCTTCTGATGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATGTGATGATGCAACGGAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACATTGGATAAGCTTCTTTaGGGCCAGCATAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTLDKLL*GQHKIC
Trigger: GCAAATTTTATGCTGGCCTCAAAGAAGCTTATCCAA...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGCCAGAAGTATCTTCTaGGTCATTGGCCGACTCCCT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAARSIF*VIGRLP
Trigger: AGGGAGTCGGCCAATGACTCAGAAGATACTTCTGGC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGCCTCTTTGTGACTTCTaGACAGTTTCTGTATTATCA +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQPLCDF*TVSVLS
Trigger: TGATAATACAGAAACTGTTCAGAAGTCACAAAGAGG...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACATCGTATACTTTGAAGTaGGGTCTCACTTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTSYTLK*GLTFLT
Trigger: AGTCAAGAAAGTGAGACCTCACTTCAAAGTATACGA...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAATCACCAGGCTGGGATaGCAATTCTTCTGCAGATTG +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGITRLG*QFFCRL
Trigger: CAATCTGCAGAAGAATTGTCATCCCAGCCTGGTGAT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGGCTATGTGCCAAGATaGAAGCAGCCGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAGYVPR*KQPMGK
Trigger: TTTCCCCATCGGCTGCTTTCATCTTGGCACATAGCC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTTCATGTCATCATTTaGATCCATGCACACACGAAA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFFHVII*IHAHTK
Trigger: TTTCGTGTGTGCATGGATTCAAATGATGACATGAAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGAACTTCTTTTGAGCTaGAGGGTCTTTGAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIELLLS*RVFERV
Trigger: AACTCTCTCAAAGACCCTTCAGCTCAAAAGAAGTTC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACGCAGTGCTAATGCTTaGGTTTCTTCACAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLRSANA*VSSQLL
Trigger: CAGTAGCTGTGAAGAAACTCAAGCATTAGCACTGCG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGACCGCACTTTCTCCTaGAAGATCTTGCCATCTATG +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGDRTFS*KILPSM
Trigger: CATAGATGGCAAGATCTTTCAGGAGAAAGTGCGGTC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATCTTCAGTTACACTGTaGGCACTTGCAGTTCGGTTG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLSSVTL*ALAVRL
Trigger: CAACCGAACTGCAAGTGCTCACAGTGTAACTGAAGA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCAAAAGTGTATCTGCTTaGATAAGCTTGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFKSVSA*ISLSIT
Trigger: TGTGATGGACAAGCTTATTCAAGCAGATACACTTTT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAGAAGCGATTCAGTTTaGGCAAGGGGAAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIRSDSV*ARGNFR
Trigger: TCGAAAATTTCCCCTTGCTCAAACTGAATCGCTTCT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGGTTCCAACTCTCCCTaGAGGCTCGAACTTTCAACT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSGSNSP*RLELST
Trigger: AGTTGAAAGTTCGAGCCTTCAGGGAGAGTTGGAACC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAAAACATTGATCGCTTaGACAGAAGCCTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIKTLIA*TEAFPF
Trigger: AAAGGGGAAGGCTTCTGTTCAAGCGATCAATGTTTT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGCTCTCCTTCAATATTaGGCTTGGCTCCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFALLQY*AWLQVC
Trigger: GCAGACCTGGAGCCAAGCTCAATATTGAAGGAGAGC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAAGACAGAAATTCCGTaGCAAACCACAGATTGCTCT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIKTEIP*QTTDCS
Trigger: AGAGCAATCTGTGGTTTGTCACGGAATTTCTGTCTT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACTCCATTTCTATTTCTaGTGGCGTGCTGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILHFYF*WRAACK
Trigger: TTTACAAGCAGCACGCCATCAGAAATAGAAATGGAG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTGGCTAGTGCATATTaGCACAATCTTCCAGATTAT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLASAY*HNLPDY
Trigger: ATAATCTGGAAGATTGTGTCAATATGCACTAGCCAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAGATGGGGCCTTCTATaGTTATTCATTGCTATGCCT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIRWGLL*LFIAMP
Trigger: AGGCATAGCAATGAATAAGCATAGAAGGCCCCATCT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATTCTTCGGTCCAACCTaGAGAAACTACTCGACTCTC +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGFFGPT*RNYSTL
Trigger: GAGAGTCGAGTAGTTTCTGCAGGTTGGACCGAAGAA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCTGCTCAAGGAAGCCTaGTGTAGTAAGCGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLLKEA*CSKRKH
Trigger: GTGCTTGCGCTTACTACAGCAGGCTTCCTTGAGCAG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTCTGGACACAAGTGCTaGTCAAGGAAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSSGHKC*SRKPAV
Trigger: TACAGCAGGCTTCCTTGAGCAGCACTTGTGTCCAGA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTAAGGCTCGCTGGCTGTaGTGTCATAGCCAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSKARWL*CHSQKY
Trigger: ATACTTCTGGCTATGACAGCACAGCCAGCGAGCCTT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAATGTCTGCTGCTTGGTaGATATGTTCAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLMSAAW*ICSGEG
Trigger: GCCTTCTCCTGAACATATGCACCAAGCAGCAGACAT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATATCAGCCTCTTTCTTaGTCCGTGAAACTCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLYQPLS*SVKLVL
Trigger: GAGCACGAGTTTCACGGAGCAAGAAAGAGGCTGATA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCTCCACTGCTGGAATaGCTCAGGTACATGATTGAC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPPLLE*LRYMID
Trigger: GTCAATCATGTACCTGAGGCATTCCAGCAGTGGAGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAAGCCTCTGTAGTCTCTaGGCAAGTTCCGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLSLCSL*ASSVSV
Trigger: AACTGAAACGGAACTTGCGCAGAGACTACAGAGGCT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGGAAGTGAAGCACAGTaGCGCTATTGGAATAGTGGG +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEGSEAQ*RYWNSG
Trigger: CCCACTATTCCAATAGCGGCACTGTGCTTCACTTCC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTTGTCCGTACTGTTCATaGTTCTCACACCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPCPYCS*FSHLVP
Trigger: AGGAACAAGGTGTGAGAAGCATGAACAGTACGGACA...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATCGCATTCACCCGGCTaGATAGCTGCTAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISASHSPG*IAAKEG
Trigger: TCCTTCCTTAGCAGCTATGCAGCCGGGTGAATGCGA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCAGTTTGGAGTTAAAGTaGTTTGGAGAACGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFSLELK*FGEREV
Trigger: AACTTCACGTTCTCCAAAGCACTTTAACTCCAAACT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGCAACTGGCAAAAACTaGCTAATTTTGAGATTCATT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILATGKN*LILRFI
Trigger: AATGAATCTCAAAATTAGGCAGTTTTTGCCAGTTGC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCTTGGTACAGATTCAATaGTCTGTAAATAGCAGACTT +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLVQIQ*SVNSRL
Trigger: AAGTCTGCTATTTACAGAGCATTGAATCTGTACCAA...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGAATTCAGTTAGTGTaGGCACTACACTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGIQLV*ALHWLL
Trigger: TAGCAGCCAGTGTAGTGCCCACACTAACTGAATTCC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTTCCTAAGATTTTCTaGCATCATCTCTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFFPKIF*HHLCST
Trigger: AGTACTGCAGAGATGATGCCAGAAAATCTTAGGAAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCTTCAGATCCACTGCTaGGCAGGATCCCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLQIHC*AGSLEI
Trigger: GATTTCAAGGGATCCTGCCCAGCAGTGGATCTGAAG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATATCTTCTGAGTCATTaGCCGACTCCCTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGYLLSH*PTPCQT
Trigger: AGTCTGACAGGGAGTCGGCCAATGACTCAGAAGATA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGACTTAAAGGCTCGCTaGCTGTGCTGTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFDLKAR*LCCHSQ
Trigger: CTGGCTATGACAGCACAGCCAGCGAGCCTTTAAGTC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTATAAGAGTGGCATTGTaGGGATCAGCCCACACTTGG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSIRVAL*GSAHTW
Trigger: CCAAGTGTGGGCTGATCCCCACAATGCCACTCTTAT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATCACTGGTTCATAGATaGTATACTGAGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISLVHR*YTEQDS
Trigger: ACTGTCCTGCTCAGTATACCATCTATGAACCAGTGA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCAAAAGTAGAAGTTCGTaGGATTGTGACAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFKSRSS*DCDKRK
Trigger: CTTACGTTTGTCACAATCCCACGAACTTCTACTTTT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAAGCAGTAAAACCAGATaGGCTTATTACCATAAATCC +
Preference number: 4 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGSSKTR*AYYHKS
Trigger: GGATTTATGGTAATAAGCCCATCTGGTTTTACTGCT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTAGAACGCAGCATATaGGCGGCCATCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALERSI*AAICCG
Trigger: TCCACAACAGATGGCCGCCCATATGCTGCGTTCTAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGTTTCTTTGATTGGGTaGCAACATAAGTATCTGCAA +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFVSLIG*QHKYLQ
Trigger: TTGCAGATACTTATGTTGCCACCCAATCAAAGAAAC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATCCCAGCACTCCCTTTaGGACATCACTGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISASQHSL*DITDRD
Trigger: GTCTCTGTCAGTGATGTCCCAAAGGGAGTGCTGGGA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATGTCATCTTCTGACCTaGGTTCTGCTCCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLCHLLT*VLLPTV
Trigger: AACAGTTGGGAGCAGAACCCAGGTCAGAAGATGACA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGAGTTCGGTTGTAATTTaGCTCATAACCAAGAGAATA +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILSSVVI*LITKRI
Trigger: TATTCTCTTGGTTATGAGCCAAATTACAACCGAACT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATGGGGTCATCTTCTCTaGCTCCTTTGCGGTACTCTT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEWGHLL*LLCGTL
Trigger: AAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTGGGGTCATCTTCTCTaGCTCCTTTGCGGTACTCTT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSWGHLL*LLCGTL
Trigger: AAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTTCTAGAGCCTGCCGATaGATGAGGATAAAAAGACGA +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPSRACR*MRIKRR
Trigger: TCGTCTTTTTATCCTCATCCATCGGCAGGCTCTAGA...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGATACTCCCTCAGGCTaGTTGGAGAAAGCCACGGAA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISADTPSG*LEKATE
Trigger: TTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGACTTTATCATTATTTaGATGGTTTGTCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: QTAIIWERQTAPRCLGILDFIII*MVCPVI
Trigger: GATGACTGGACAAACCATCCAAATAATGATAAAGTC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTAGGTTAAAGCATACATaGCCACGTGCTTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPRLKHT*PRAFSR
Trigger: TCGAGAGAAAGCACGTGGCCATGTATGCTTTAACCT...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAAAATTCACGTGCCAGTaGGTTACTGTCGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEKFTCQ*VTVGAH
Trigger: ATGAGCACCGACAGTAACTCACTGGCACGTGAATTT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAGTACTAACATCTACTaGCAGAAGATGCAACACTGT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISTNIY*QKMQHC
Trigger: ACAGTGTTGCATCTTCTGTCAGTAGATGTTAGTACT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGTCATTTGGACTGCTTaGTGCACTGAAACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGVIWTA*CTETFC
Trigger: ACAGAAGGTTTCAGTGCATCAAGCAGTCCAAATGAC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAACCACAGGGAAACACTaGAACCTTCTGATAGGTGTG +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADETTGKH*NLLIGV
Trigger: CACACCTATCAGAAGGTTTCAGTGTTTCCCTGTGGT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACATTTCATGTCATCATTTaGATCCATGCACACACGAAA +
Preference number: 4 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTFHVII*IHAHTK
Trigger: TTTCGTGTGTGCATGGATTCAAATGATGACATGAAA...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGAGCTGAAGGGTCTTTaGGAGAGTTGGGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGELKGL*ESWVFI
Trigger: AATGAAAACCCAACTCTCTCAAAGACCCTTCAGCTC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGACCGCACTTTCTCCTaGAAGATCTTGCCATCTATG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSDRTFS*KILPSM
Trigger: CATAGATGGCAAGATCTTTCAGGAGAAAGTGCGGTC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCCTCAGGTACATGATTaGCCGCACTTTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSPQVHD*PHFLLK
Trigger: TTTCAGGAGAAAGTGCGGTCAATCATGTACCTGAGG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTAATGCCTCAGGTACATaGTTGACCGCACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSNASGT*LTALSP
Trigger: AGGAGAAAGTGCGGTCAATCATGTACCTGAGGCATT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTTGTTGTATAGCTGGTaGTGGGTGGTTAACGAGGAC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLLYSW*WVVNED
Trigger: GTCCTCGTTAACCACCCATCACCAGCTATACAACAA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAAGGTCTGCTTTTGTTaGTGCACTGGGAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFKVCFC*CTGRDA
Trigger: TGCATCCCTCCCAGTGCATCAACAAAAGCAGACCTT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAAGGTCTGCTTTTGTTaGTGCACTGGGAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAKVCFC*CTGRDA
Trigger: TGCATCCCTCCCAGTGCATCAACAAAAGCAGACCTT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATCATGTGTCAGCTGCTaGATAAGTTCCTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGSCVSC*ISSCQC
Trigger: ACATTGGCAGGAACTTATTCAGCAGCTGACACATGA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTCTAGCGCTCGTCTCTaGACTGGATCTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFSSARL*TGSSTA
Trigger: TGCAGTTGAAGATCCAGTTCAGAGACGAGCGCTAGA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATGTTTAAATCCCATATaGTGCAGGTTCCGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGCLNPI*CRFRLC
Trigger: GCAGAGACGGAACCTGCATCATATGGGATTTAAACA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAAGTAGCAATATCACCTaGGGTTTCACTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADESSNIT*GFTGRD
Trigger: GTCTCTGCCAGTGAAACCTCAGGTGATATTGCTACT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGATTCACACCTGGCCTaGGCACACGGTGATCTAAAT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISADSHLA*AHGDLN
Trigger: ATTTAGATCACCGTGTGCTCAGGCCAGGTGTGAATC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGGCTTATTCATTGCTATaGCTTTTTCATCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQAYSLL*LFHLNW
Trigger: CCAATTCAGATGAAAAAGGCATAGCAATGAATAAGC...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAAATCTTCAGATCCACTaGTGGGCAGGATCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADENLQIH*WAGSLE
Trigger: TTCAAGGGATCCTGCCCAGCAGTGGATCTGAAGATT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGAGGCATCTTTCTGTTaGTCCCCTAGGCTGATTATC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEEASFC*SPRLII
Trigger: GATAATCAGCCTAGGGGAGCAACAGAAAGATGCCTC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACGCCATCTTCAGGATTaGTTTCACTATCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGRHLQD*FHYLLR
Trigger: ACGAAGCAGATAGTGAAAGCAATCCTGAAGATGGCG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATTCACAGTTCCCTGTTaGATGAGCAGAAAAACATTC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIFTVPC*MSRKTF
Trigger: GAATGTTTTTCTGCTCATGCAACAGGGAACTGTGAA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACTTAAATTTGGAGCGTaGAGTAAAGGGAAGGTTAGA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILKFGA*SKGKVR
Trigger: TCTAACCTTCCCTTTACTGCACGCTCCAAATTTAAG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGCTAAATGTTGCCATTTaGTTGGGAGGAAAATATTCT +
Preference number: 4 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQLNVAI*LGGKYS
Trigger: AGAATATTTTCCTCCCAAGCAAATGGCAACATTTAG...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCATCCAGCAACATATCTaGTACCTTAGAACAAGAATT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFIQQHI*YLRTRI
Trigger: AATTCTTGTTCTAAGGTAGCAGATATGTTGCTGGAT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCCGCTTTTGAACTACTaGATGATGGGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFPLLNY*MMGSRR
Trigger: CCTTCTGCTCCCCATCATGCAGTAGTTCAAAAGCGG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTAGCCTCTGTAGTCTCTaGGCAAGTTCCGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSSLCSL*ASSVSV
Trigger: AACTGAAACGGAACTTGCGCAGAGACTACAGAGGCT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTAGAATTTTAGTCCATTaGTGCTTGGAACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPRILVH*CLEPLA
Trigger: AGCCAGTGGTTCCAAGCAGCAATGGACTAAAATTCT...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAATGCACTGGGAGGGATaGACTTGTGACCACATAACT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEMHWEG*TCDHIT
Trigger: AGTTATGTGGTCACAAGTGCATCCCTCCCAGTGCAT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGGGGTCATACCATACTaGTCTATCATGTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSGVIPY*SIMCQL
Trigger: CAGCTGACACATGATAGAGCAGTATGGTATGACCCC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATGTCTCTCTAGATGGTaGAACACTGATGCATCTTCG +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGCLSRW*NTDASS
Trigger: CGAAGATGCATCAGTGTTGCACCATCTAGAGAGACA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACTTGGTGTTATCAAATaGCAACAGGAGTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLLGVIK*QQECSA
Trigger: GGCAGAACACTCCTGTTGGCATTTGATAACACCAAG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTTCTCTGGCTCCTTTaGGGTACTCTTCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALLWLL*GTLPPS
Trigger: ACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCTTCTCTGGCTCCTTTaGGGTACTCTTCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLLWLL*GTLPPS
Trigger: ACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATGTCCGTACTGTTCATaGTTCTCACACCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLCPYCS*FSHLVP
Trigger: AGGAACAAGGTGTGAGAAGCATGAACAGTACGGACA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGCTTTAAGTCCCATGTaGTCCATAACCTTACAATTC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIALSPM*SITLQF
Trigger: GAATTGTAAGGTTATGGAGCACATGGGACTTAAAGC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTGGTACAGATTCAATaGTCTGTAAATAGCAGACTT +
Preference number: 4 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFLVQIQ*SVNSRL
Trigger: AAGTCTGCTATTTACAGAGCATTGAATCTGTACCAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGGCATACATGGCCACGTaGTTTCTCTCGAATCTATCT +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEAYMAT*FLSNLS
Trigger: AGATAGATTCGAGAGAAAGCACGTGGCCATGTATGC...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAGTTTAGCTTTGGGGTaGTCTTGTTTAGGAAACGAT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIISLALG*SCLGND
Trigger: ATCGTTTCCTAAACAAGACCACCCCAAAGCTAAACT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGAGGAGTCTGTTCTTTaGTTGCTAAGCGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLEESVL*LLSGQV
Trigger: AACTTGACCGCTTAGCAACCAAAGAACAGACTCCTC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGTGTGGGCACTACACTaGCTGCTAAAGGAGAATTAT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLVWALH*LLKENY
Trigger: ATAATTCTCCTTTAGCAGCCAGTGTAGTGCCCACAC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGTGTGGGCACTACACTaGCTGCTAAAGGAGAATTAT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGVWALH*LLKENY
Trigger: ATAATTCTCCTTTAGCAGCCAGTGTAGTGCCCACAC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGGAATTCAGTTAGTGTaGGCACTACACTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSGIQLV*ALHWLL
Trigger: TAGCAGCCAGTGTAGTGCCCACACTAACTGAATTCC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAACACCCGATAGGATCTaGACACAAGTGCTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISATPDRI*TQVLLK
Trigger: CTTGAGCAGCACTTGTGTCCAGATCCTATCGGGTGT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTATCTTCTGAGTCATTaGCCGACTCCCTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSYLLSH*PTPCQT
Trigger: AGTCTGACAGGGAGTCGGCCAATGACTCAGAAGATA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGGATCAGCCCACACTTaGATCATCAACGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEGSAHT*IINALD
Trigger: ATCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGTCCAGAGACCCATATaGAGATTTTCCCATGAATCC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLVQRPI*RFSHES
Trigger: GGATTCATGGGAAAATCTCCATATGGGTCTCTGGAC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTCTATCAACAAGACTTaGCCAACGGCCAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFSINKT*PTANSC
Trigger: GCAGCTGTTGGCCGTTGGCCAAGTCTTGTTGATAGA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTCCGTTTCAGTTGCTTaGCTAGGGTTCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFSVSVA*LGFSWL
Trigger: GAGCCAAGAGAACCCTAGCCAAGCAACTGAAACGGA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGAGAGAGACACTGCCTaGGTGATATCTGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEERDTA*VISAAI
Trigger: AATAGCTGCAGATATCACCCAGGCAGTGTCTCTCTC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAAACAGGTAAGAGAGTaGTGGTTTGACAACATCTTC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIKQVRE*WFDNIF
Trigger: GAAGATGTTGTCAAACCACCACTCTCTTACCTGTTT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGTCAGCAAGTATAAATaGGAACACAGGATACTGCAT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIVSKYK*EHRILH
Trigger: ATGCAGTATCCTGTGTTCCCATTTATACTTGCTGAC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGCACAGTGCCGCTATTaGAATAGTGGGAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAAQCRY*NSGSHS
Trigger: ACTATGGCTCCCACTATTCCAATAGCGGCACTGTGC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCGCTCGTCTCTGAACTaGATCTTCAACTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFRSSLN*IFNCRD
Trigger: GTCTCTGCAGTTGAAGATCCAGTTCAGAGACGAGCG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCAACCCCACAGCAGCTaGAAGCTCTCCTTCAATATT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSQPHSS*KLSFNI
Trigger: AATATTGAAGGAGAGCTTCCAGCTGCTGTGGGGTTG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTATGATCTCCCTGCAGTaGACATGTCCAACGAGATCC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFMISLQ*TCPTRS
Trigger: GGATCTCGTTGGACATGTCCACTGCAGGGAGATCAT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGAAGGAATAGAACATTaGCTGTTTCAAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGEGIEH*LFQALL
Trigger: CAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAAGGTTAAAGCATACATaGCCACGTGCTTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGRLKHT*PRAFSR
Trigger: TCGAGAGAAAGCACGTGGCCATGTATGCTTTAACCT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCATTGCAAAGCCGGTTaGCATCGGTCAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFHCKAG*HRSEIH
Trigger: GTGAATTTCTGACCGATGTCAACCGGCTTTGCAATG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTACTTTTGCAGAAACCTaGCTAGACAGGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFTFAET*LDRALP
Trigger: AGGAAGTGCCCTGTCTAGTCAGGTTTCTGCAAAAGT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTATACATGGCAGCATATaGCTTAAAGGCTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFIHGSI*LKGSLA
Trigger: AGCCAGCGAGCCTTTAAGTCATATGCTGCCATGTAT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACTGTTTCTGGAACACTaGACTCAACATGTAGATCCA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLFLEH*TQHVDP
Trigger: TGGATCTACATGTTGAGTTCAGTGTTCCAGAAACAG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAAAAGTCGTATACTTTaGAGTGAGGTCTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIKSRIL*SEVSLS
Trigger: AGAAAGTGAGACCTCACTTCAAAGTATACGACTTTT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAATGTTCAAAATCTGCTaGATAATTCCCGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGMFKIC*IIPEGN
Trigger: GTTGCCCTCGGGAATTATTCAGCAGATTTTGAACAT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGACTGCTTGATGCACTaGAACCTTCTGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEDCLMH*NLLFQT
Trigger: AGTCTGAAACAGAAGGTTTCAGTGCATCAAGCAGTC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAACTCTCTGGCATGCTTaGAAATCAGAATCATCCTGT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLTLWHA*KSESSC
Trigger: ACAGGATGATTCTGATTTTCAAGCATGCCAGAGAGT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGACTCTCTGGCATGCTTaGAAATCAGAATCATCCTGT +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEETLWHA*KSESSC
Trigger: ACAGGATGATTCTGATTTTCAAGCATGCCAGAGAGT...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGTTTATGATCTGCTTTaGCCACTGGAAATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSVYDLL*PLEIPA
Trigger: TGCTGGGATTTCCAGTGGTCAAAGCAGATCATAAAC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTTGTTGTATAGCTGGTaGTGGGTGGTTAACGAGGAC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLLYSW*WVVNED
Trigger: GTCCTCGTTAACCACCCATCACCAGCTATACAACAA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAACCACTGGCTTTACTTaGACCAATAGATACTTTGAA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIITTGFT*TNRYFE
Trigger: TTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGTTGTAGGGATGGGCTaGGACAGTCTCGTAGTATTT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAVVGMG*DSLVVF
Trigger: AAATACTACGAGACTGTCTCAGCCCATCCCTACAAC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGGAGGGATGCACTTGTaGCCACATAACTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFGGMHL*PHNFKA
Trigger: TGCTTTGAAGTTATGTGGTCACAAGTGCATCCCTCC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGTGCTTTGGAGAACGTaGAGTTCATTCGCATTCACC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFVLWRT*SSFAFT
Trigger: GGTGAATGCGAATGAACTTCACGTTCTCCAAAGCAC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGAGCTGTGTCTTTCTTaGATCTCTTACAGAATAGCG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLELCLS*ISYRIA
Trigger: CGCTATTCTGTAAGAGATGCAAGAAAGACACAGCTC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGAGCTGTGTCTTTCTTaGATCTCTTACAGAATAGCG +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGELCLS*ISYRIA
Trigger: CGCTATTCTGTAAGAGATGCAAGAAAGACACAGCTC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAAGATGGGGCCTTCTATaGTTATTCATTGCTATGCCT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLRWGLL*LFIAMP
Trigger: AGGCATAGCAATGAATAAGCATAGAAGGCCCCATCT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATCTACTGACAGAAGATaGAACACTGTTCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLSTDRR*NTVRKS
Trigger: GCTCTTTCGAACAGTGTTGCATCTTCTGTCAGTAGA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGAGGCATCTTTCTGTTaGTCCCCTAGGCTGATTATC +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAEASFC*SPRLII
Trigger: GATAATCAGCCTAGGGGAGCAACAGAAAGATGCCTC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCGCCATCTTCAGGATTaGTTTCACTATCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSRHLQD*FHYLLR
Trigger: ACGAAGCAGATAGTGAAAGCAATCCTGAAGATGGCG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACAATACTCTCTGGCATaGTTGAAAATCAGAATCATC +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIQYSLA*LKIRII
Trigger: GATGATTCTGATTTTCAAGCATGCCAGAGAGTATTG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACCAAACACCTTGCTCTaGTTTACTCCATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLPNTLL*FTPYLP
Trigger: TGGAAGATATGGAGTAAAGCAGAGCAAGGTGTTTGG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGACCAAAAGTGTATCTaGTTGAATAAGCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIDQKCI*LNKLVH
Trigger: ATGGACAAGCTTATTCAAGCAGATACACTTTTGGTC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGCTGGCGACAAAATATaGACTAGTAGTCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFAGDKI*TSSLPS
Trigger: GCTTGGGAGACTACTAGTGCATATTTTGTCGCCAGC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTATGCACTGGGAGGGATaGACTTGTGACCACATAACT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFMHWEG*TCDHIT
Trigger: AGTTATGTGGTCACAAGTGCATCCCTCCCAGTGCAT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCTTGGTGTTATCAAATaGCAACAGGAGTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLGVIK*QQECSA
Trigger: GGCAGAACACTCCTGTTGGCATTTGATAACACCAAG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATCAGACTCTAGAGCCTaGCGATGGATGAGGATAAAA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADESDSRA*RWMRIK
Trigger: TTTTATCCTCATCCATCGGCAGGCTCTAGAGTCTGA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTGCAGGTTCCGTCTCTaGTCACACTTATCAGTATAC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSCRFRL*SHLSVY
Trigger: GTATACTGATAAGTGTGAGCAGAGACGGAACCTGCA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGCTTTAAGTCCCATGTaGTCCATAACCTTACAATTC +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPALSPM*SITLQF
Trigger: GAATTGTAAGGTTATGGAGCACATGGGACTTAAAGC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAGAAATCCTCGACCATaGACAAGGTACTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISARNPRP*TRYCPR
Trigger: CCTTGGACAGTACCTTGTCCATGGTCGAGGATTTCT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCTTCTGAATCTGAGGTaGAGAGCTGTGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLLNLR*RAVSFL
Trigger: CAAGAAAGACACAGCTCTCCACCTCAGATTCAGAAG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGAGGAGTCTGTTCTTTaGTTGCTAAGCGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSEESVL*LLSGQV
Trigger: AACTTGACCGCTTAGCAACCAAAGAACAGACTCCTC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACAAAGCCATAGCATCTaGAGGAGTCTGTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEQSHSI*RSLFFG
Trigger: ACCAAAGAACAGACTCCTCCAGATGCTATGGCTTTG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACAAATGTCTGCTGCTTaGTGCATATGTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGQMSAA*CICSGE
Trigger: TTCTCCTGAACATATGCACCAAGCAGCAGACATTTG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACAAATGTCTGCTGCTTaGTGCATATGTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLQMSAA*CICSGE
Trigger: TTCTCCTGAACATATGCACCAAGCAGCAGACATTTG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGATGAAAGCAGCCGATaGGGAAAACTCTCTCTATCA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEDESSR*GKLSLS
Trigger: TGATAGAGAGAGTTTTCCCCATCGGCTGCTTTCATC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGTCCAGAGACCCATATaGAGATTTTCCCATGAATCC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSVQRPI*RFSHES
Trigger: GGATTCATGGGAAAATCTCCATATGGGTCTCTGGAC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATGCAAAAACTCTTCTTaGGATGATAAACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIICKNSS*DDKQWP
Trigger: TGGCCATTGTTTATCATCCCAAGAAGAGTTTTTGCA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGGCATTACAGATGTATaGTTGGGTCCACAAGCATAC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEGITDV*LGPQAY
Trigger: GTATGCTTGTGGACCCAACCATACATCTGTAATGCC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGTCACTGGTTCATAGATaGTATACTGAGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEESLVHR*YTEQDS
Trigger: ACTGTCCTGCTCAGTATACCATCTATGAACCAGTGA...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTGTCATCTTCTGACCTaGGTTCTGCTCCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFCHLLT*VLLPTV
Trigger: AACAGTTGGGAGCAGAACCCAGGTCAGAAGATGACA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTATAGCTGGTGATGGGTaGTTAACGAGGACCAAAAGT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSIAGDG*LTRTKS
Trigger: ACTTTTGGTCCTCGTTAACCACCCATCACCAGCTAT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGGAGCAGAAGGTGACTaGAGTGAATCTGTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAGAEGD*SESVRF
Trigger: AAACCTCACAGATTCACTCCAGTCACCTTCTGCTCC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTCTCCTCTCTCGATTTaGCCCTTCTGTTGGATCCAA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFSPLSI*PFCWIQ
Trigger: TTGGATCCAACAGAAGGGCCAAATCGAGAGAGGAGA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR CAA 72 bp TCCTTACAAGACCACAGAATTTTAGTCCATTGCTGCTaGGAACCACTGGCTTTACTTGAACCAATAGATACT +
Preference number: 4 (lower is better)
Translates to: SLQDHRILVHCC*EPLALLEPIDT
Trigger: AGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATGGACTAAAATTCTGTGGTCTTGTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACTTTCACCACTGCTGTaGCATTTACAGTCTATATCA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLSPLL*HLQSIS
Trigger: TGATATAGACTGTAAATGTCACAGCAGTGGTGAAAG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAAGTACTAACATCTACTaGCAGAAGATGCAACACTGT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLSTNIY*QKMQHC
Trigger: ACAGTGTTGCATCTTCTGTCAGTAGATGTTAGTACT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCAACAGATCAGAATCTaGAGAACTCCTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSQQIRI*RTPSKS
Trigger: GCTTTTGGAAGGAGTTCTTCAGATTCTGATCTGTTG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCATATTCCAATGTTATaGACACCCGATAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSHIPML*TPDRIW
Trigger: CCAGATCCTATCGGGTGTTCATAACATTGGAATATG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACATGGAGCAAAGGAATaGTTACAGATTTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEHGAKE*LQIWDP
Trigger: TGGATCCCAAATCTGTAATCATTCCTTTGCTCCATG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAACTCTGAGGAGAATCTaGATAAGCTTGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADETLRRI*ISLLMM
Trigger: CATCATCAGCAAGCTTATTCAGATTCTCCTCAGAGT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGAGGTCTCACTTTCTTaGCTTGTAAATAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGEVSLS*LVNSFA
Trigger: AGCAAAGCTATTTACAAGTCAAGAAAGTGAGACCTC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTGTTTCAATCACCTTTaGCTGGGAAAGATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFCFNHL*LGKMVP
Trigger: AGGGACCATCTTTCCCAGTCAAAGGTGATTGAAACA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGTCATTTGGACTGCTTaGTGCACTGAAACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFVIWTA*CTETFC
Trigger: ACAGAAGGTTTCAGTGCATCAAGCAGTCCAAATGAC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATTATTTCCCCTTGAGTaGGGTTTTCGAGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLFPLE*GFRVSH
Trigger: ATGACTTACTCGAAAACCTCACTCAAGGGGAAATAA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTATAAAAGGCCTCTTGTaGACCAACCTTAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFIKGLL*TNLSSV
Trigger: AACGGAGCTAAGGTTGGTTCACAAGAGGCCTTTTAT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGAGCTGAAGGGTCTTTaGGAGAGTTGGGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFELKGL*ESWVFI
Trigger: AATGAAAACCCAACTCTCTCAAAGACCCTTCAGCTC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTTTCTTCACAGCTACTaGGTTCAACAACCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFFLHSY*VQQPWQ
Trigger: TTGCCAGGGTTGTTGAACTCAGTAGCTGTGAAGAAA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTCTCCTTCATATGGTaGAGCAGTAAAACCAGATGG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALSFIW*SSKTRW
Trigger: CCATCTGGTTTTACTGCTTCACCATATGAAGGAGAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTATGACAGACCACTTCTaGAACAATCCCATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSMTDHF*NNPMFL
Trigger: GAGAAACATGGGATTGTTTCAGAAGTGGTCTGTCAT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGAGGAACTGCAAGCATaGATTGTAACTGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGEELQA*IVTAMK
Trigger: TTTCATAGCAGTTACAATTCATGCTTGCAGTTCCTC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAAAGAGAGTGGTGGTTTaGCAACATCTTCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLKRVVV*QHLLIS
Trigger: AGAAATCAGAAGATGTTGTCAAACCACCACTCTCTT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGAATTTGTCAGAGCGGTaGTGTTACCATATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LRFTLIDSLAALSLTVEENLSER*CYHIPE
Trigger: TTCTGGAATATGGTAACATCACCGCTCTGACAAATT...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCAAGCCTTTTATCCATaGCAAAGGACTCGGATAGGT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFQAFYP*QRTRIG
Trigger: ACCTATCCGAGTCCTTTGTCATGGATAAAAGGCTTG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTGTTTAAATCCCATATaGTGCAGGTTCCGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFCLNPI*CRFRLC
Trigger: GCAGAGACGGAACCTGCATCATATGGGATTTAAACA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGCAGTCTTTCACCACTaGTGTGACATTTACAGTCTA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEAVFHH*CDIYSL
Trigger: TAGACTGTAAATGTCACAGCAGTGGTGAAAGACTGC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGCTTATTCATTGCTATaGCTTTTTCATCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIAYSLL*LFHLNW
Trigger: CCAATTCAGATGAAAAAGGCATAGCAATGAATAAGC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATTTCTTTTGTCTTGGTaGAAAAGGGTCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEFLLSW*KRVRLL
Trigger: AAGCAGCCTGACCCTTTTGCACCAAGACAAAAGAAA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGTGATGAAACACCGTTaGTTAAATTTGGAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEVMKHR*LNLERA
Trigger: TGCACGCTCCAAATTTAAGCAACGGTGTTTCATCAC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGTGAGTACTAAATGTTaGCATTTGCTTGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGVSTKC*HLLGRK
Trigger: TTTCCTCCCAAGCAAATGGCAACATTTAGTACTCAC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTTCTCCTGAAAGATCTTaGCATCTATGTGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPSPERS*HLCAKK
Trigger: TTTCTTTGCACATAGATGGCAAGATCTTTCAGGAGA...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATACACTGTGAGCACTTaGAGTTCGGTTGTAATTTGG +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEYTVST*SSVVIW
Trigger: CCAAATTACAACCGAACTGCAAGTGCTCACAGTGTA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTACTGCTATGAAAAGTTaGTGTATATCACAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPTAMKS*CISQAS
Trigger: GCTTGCTTGTGATATACAGCAACTTTTCATAGCAGT...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAAGTTCCGTTTCAGTTaGTTGGCTAGGGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAKFRFS*LARVLL
Trigger: CAAGAGAACCCTAGCCAAGCAACTGAAACGGAACTT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGTTCCTGCCAATGTCTaGTGGCACTCAAATCTACTT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAVPANV*WHSNLL
Trigger: AAGTAGATTTGAGTGCCAGCAGACATTGGCAGGAAC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATCACACCTTGTTCCTTaGTATATGTCATCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLSHLVP*YMSSED
Trigger: GTCTTCTGATGACATATAGCAAGGAACAAGGTGTGA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTAGTTTGGAGTTAAAGTaGTTTGGAGAACGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPSLELK*FGEREV
Trigger: AACTTCACGTTCTCCAAAGCACTTTAACTCCAAACT...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGTTGCCTTTTCTTCTTaGACAGGTATCTTCCATACC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEVAFSS*TGIFHT
Trigger: GGTATGGAAGATACCTGTCCAAGAAGAAAAGGCAAC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTTCTGAATCTGAGGTaGAGAGCTGTGTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALLNLR*RAVSFL
Trigger: CAAGAAAGACACAGCTCTCCACCTCAGATTCAGAAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACAAAGCCATAGCATCTaGAGGAGTCTGTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAQSHSI*RSLFFG
Trigger: ACCAAAGAACAGACTCCTCCAGATGCTATGGCTTTG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATCTAATTGGGCTAGTTaGTCAGAGTCAACAGTACAA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGSNWAS*SESTVQ
Trigger: TTGTACTGTTGACTCTGACCAACTAGCCCAATTAGA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTAGTGTCTCTTCTAATTaGGCTAGTTGGTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSSVSSN*ASWSES
Trigger: TGACTCTGACCAACTAGCCCAATTAGAAGAGACACT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCACCATGAAGACAAATaGCCAGAAGGGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFHHEDK*PEGLPK
Trigger: TTTTGGAAGCCCTTCTGGCCATTTGTCTTCATGGTG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATGGGATGATAAACAATaGCCAATCATGCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIWDDKQ*PIMQNV
Trigger: AACATTTTGCATGATTGGCCATTGTTTATCATCCCA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATTACAGATGTATGGTTaGGTCCACAAGCATACAGAT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLLQMYG*VHKHTD
Trigger: ATCTGTATGCTTGTGGACCCAACCATACATCTGTAA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGCGGCCATCTGTTGTaGAATAATATTAGAGGAATT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGGHLL*NNIRGI
Trigger: AATTCCTCTAATATTATTCCACAACAGATGGCCGCC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGAAGATACAACTGGTTaGCTAGCAAGGAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEEDTTG*LARKIH
Trigger: GTGGATTTTCCTTGCTAGCCAACCAGTTGTATCTTC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCTGCCAATGTCTGCTaGCACTCAAATCTACTTTAT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPANVC*HSNLLY
Trigger: ATAAAGTAGATTTGAGTGCCAGCAGACATTGGCAGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCGTAGGTTTTTATCATaGTTTCTAGCGCTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSRRFLS*FLALVS
Trigger: AGAGACGAGCGCTAGAAACCATGATAAAAACCTACG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR CAA 72 bp CAACCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTaGGAGTTAAAGTGCTTTGGAGAACGTGAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QPPKTGEVNKSS*ELKCFGEREVH
Trigger: ATGAACTTCACGTTCTCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR CAA 72 bp AGCATACATGGCCACGTGCTTTCTCTCGAATCTATCTaGACAGCAGAGACTTTGGAATTATATTTTATATGG +
Preference number: 4 (lower is better)
Translates to: SIHGHVLSLESI*TAETLELYFIW
Trigger: CCATATAAAATATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCATGTATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCTTTCACCACTGCTGTaGCATTTACAGTCTATATCA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLSPLL*HLQSIS
Trigger: TGATATAGACTGTAAATGTCACAGCAGTGGTGAAAG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGCTAAAGGAGAATTATaGTTCAAGGTAACGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLAKGEL*FKVTSN
Trigger: GTTTGACGTTACCTTGAATCATAATTCTCCTTTAGC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAACACAAAATCTTCCTaGACCTCCTGCAGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFNTKSS*TSCSVF
Trigger: GAAAACACTGCAGGAGGTTCAGGAAGATTTTGTGTT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAAAAAGAAGGGCTCTATaGCGATACTTTGAAAACACA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLKRRAL*RYFENT
Trigger: TGTGTTTTCAAAGTATCGTCATAGAGCCCTTCTTTT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAATCCATGGCTTGACTaGAGTAGAAGGGATTTGAAG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISANPWLD*SRRDLK
Trigger: CTTCAAATCCCTTCTACTTCAGTCAAGCCATGGATT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTACTCTGAGGAGAATCTaGATAAGCTTGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFTLRRI*ISLLMM
Trigger: CATCATCAGCAAGCTTATTCAGATTCTCCTCAGAGT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACCTCTTTGTGACTTCTaGACAGTTTCTGTATTATCA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLPLCDF*TVSVLS
Trigger: TGATAATACAGAAACTGTTCAGAAGTCACAAAGAGG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAGCGGCTTCAGTAGCTaGAACTTCTTCCACATTTAT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISASGFSS*NFFHIY
Trigger: ATAAATGTGGAAGAAGTTTCAGCTACTGAAGCCGCT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATTAAAACTACAACACTaGGAATCCTCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLKLQH*ESSASS
Trigger: AGAAGAAGCTGAGGATTCTCAGTGTTGTAGTTTTAA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGAACTTCTTTTGAGCTaGAGGGTCTTTGAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFELLLS*RVFERV
Trigger: AACTCTCTCAAAGACCCTTCAGCTCAAAAGAAGTTC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAGGTTTTCAGAGTCATaGTTTGCGGTGGTCCTTATA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFRFSES*FAVVLI
Trigger: TATAAGGACCACCGCAAATCATGACTCTGAAAACCT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTACTGGAGTGAATCTGTaGGGTTTTCAGAGTCATGAT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFTGVNL*GFQSHD
Trigger: ATCATGACTCTGAAAACCTCACAGATTCACTCCAGT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTCATCATTTGCCACTaGACGCATTTTCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALIICH*THFHQK
Trigger: CTTCTGATGAAAATGCGTTCAGTGGCAAATGATGAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAAAACATTGATCGCTTaGACAGAAGCCTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAKTLIA*TEAFPF
Trigger: AAAGGGGAAGGCTTCTGTTCAAGCGATCAATGTTTT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATACTGTTGTGAACTTTaGATAAAGTTTACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLYCCEL*IKFTGG
Trigger: GCCTCCAGTAAACTTTATTCAAAGTTCACAACAGTA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTCTCGAATCTATCTTaGCAGCAGAGACTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALSNLS*QQRLWN
Trigger: ATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCTCTCGAATCTATCTTaGCAGCAGAGACTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLSNLS*QQRLWN
Trigger: ATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACAAATCACTTCAACGTaGATAGGAGTAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGQITST*IGVISS
Trigger: AGATGAGATTACTCCTATTCACGTTGAAGTGATTTG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATTCAGAGTCATGATTTaGGGTGGTCCTTATAAATTC +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGFRVMI*GGPYKF
Trigger: GAATTTATAAGGACCACCGCAAATCATGACTCTGAA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTTCGAGGACCAGCAATaGTTTTCCGCTTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFFEDQQ*FSAFEL
Trigger: TAGTTCAAAAGCGGAAAAGCATTGCTGGTCCTCGAA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAGAATTTTAGTCCATTaGTGCTTGGAACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFRILVH*CLEPLA
Trigger: AGCCAGTGGTTCCAAGCAGCAATGGACTAAAATTCT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATTTCCTAAGATTTTCTaGCATCATCTCTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLFPKIF*HHLCST
Trigger: AGTACTGCAGAGATGATGCCAGAAAATCTTAGGAAA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGATCATCAACGCTTTaGATCCCAGTGAAATTATAT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGSSTL*IPVKLY
Trigger: ATATAATTTCACTGGGATCCAAAGCGTTGATGATCC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATGCAAAAACTCTTCTTaGGATGATAAACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLCKNSS*DDKQWP
Trigger: TGGCCATTGTTTATCATCCCAAGAAGAGTTTTTGCA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTACTTGCCATACTTACATaGCATTACAGATGTATGGTT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLLAILT*HYRCMV
Trigger: AACCATACATCTGTAATGCCATGTAAGTATGGCAAG...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAAGCAGTAAAACCAGATaGGCTTATTACCATAAATCC +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGSSKTR*AYYHKS
Trigger: GGATTTATGGTAATAAGCCCATCTGGTTTTACTGCT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGTTTCTTTGATTGGGTaGCAACATAAGTATCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGVSLIG*QHKYLQ
Trigger: TTGCAGATACTTATGTTGCCACCCAATCAAAGAAAC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACGTAGGTTTTTATCATaGTTTCTAGCGCTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISARRFLS*FLALVS
Trigger: AGAGACGAGCGCTAGAAACCATGATAAAAACCTACG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGGAATTCTGTCTTTATaGTATGTAAGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGGILSL*YVSLLW
Trigger: CCACAGCAAACTTACATACCATAAAGACAGAATTCC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTATCCATGATGCTGAATaGATTCTTGAACCAAATCCA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSIHDAE*ILEPNP
Trigger: TGGATTTGGTTCAAGAATTCATTCAGCATCATGGAT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATCGTATACTTTGAAGTaGGGTCTCACTTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISASYTLK*GLTFLT
Trigger: AGTCAAGAAAGTGAGACCTCACTTCAAAGTATACGA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTTAAAACTACAACACTaGGAATCCTCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLKLQH*ESSASS
Trigger: AGAAGAAGCTGAGGATTCTCAGTGTTGTAGTTTTAA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTGCCACCAACGCTTGTaGACTTCTTTAATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFCHQRL*TSLISS
Trigger: TGAAGAAATTAAAGAAGTTCACAAGCGTTGGTGGCA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAATTTGTCAGAGCGGTaGTGTTACCATATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISANLSER*CYHIPE
Trigger: TTCTGGAATATGGTAACATCACCGCTCTGACAAATT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACATAGATTCAAAAGATaGGAGTCGCCAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEHRFKR*ESPSCI
Trigger: AATACAACTTGGCGACTCTCATCTTTTGAATCTATG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTACAGAGGCACCTACTaGATAATTTGCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFYRGTY*IICFSK
Trigger: CTTTGAGAAGCAAATTATTCAGTAGGTGCCTCTGTA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAATTACTGAGCTTATCTaGCAGTGTTTTCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEITELI*QCFQSQ
Trigger: TTGGCTTTGAAAACACTGTCAGATAAGCTCAGTAAT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAATTGCTTTCACTATCTaGTTCGTAACCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEIAFTI*FVTFFF
Trigger: GAAGAAGAAGGTTACGAAGCAGATAGTGAAAGCAAT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATTCACAGTTCCCTGTTaGATGAGCAGAAAAACATTC +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAFTVPC*MSRKTF
Trigger: GAATGTTTTTCTGCTCATGCAACAGGGAACTGTGAA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGTGAGTACTAAATGTTaGCATTTGCTTGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAVSTKC*HLLGRK
Trigger: TTTCCTCCCAAGCAAATGGCAACATTTAGTACTCAC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATTCAGAGTCATGATTTaGGGTGGTCCTTATAAATTC +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEFRVMI*GGPYKF
Trigger: GAATTTATAAGGACCACCGCAAATCATGACTCTGAA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAATTTTAGTCCATTGCTaGTTGGAACCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAILVHC*LEPLAL
Trigger: TAAAGCCAGTGGTTCCAAGCAGCAATGGACTAAAAT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATTGTTAACTGTTTTCTaGCAAGCAGCTTTATTCACT +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLLLTVF*QAALFT
Trigger: AGTGAATAAAGCTGCTTGGCAGAAAACAGTTAACAA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATCTTATAGATTCACTTaGAGCTTTGTCTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGSYRFT*SFVFDS
Trigger: ACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCAACAGGAGTGTTCTaGCATTTGTTAGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPTGVF*HLLERF
Trigger: AAATCTTTCTAACAAATGGCAGAACACTCCTGTTGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAAATTCAACTCCTCTTTaGAGCACAGGATTAAATATG +
Preference number: 4 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLNSTPL*STGLNM
Trigger: CATATTTAATCCTGTGCTCCAAAGAGGAGTTGAATT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTAAAAGTAGAAGTTCGTaGGATTGTGACAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSKSRSS*DCDKRK
Trigger: CTTACGTTTGTCACAATCCCACGAACTTCTACTTTT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGGCGGCCATCTGTTGTaGAATAATATTAGAGGAATT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFGGHLL*NNIRGI
Trigger: AATTCCTCTAATATTATTCCACAACAGATGGCCGCC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTAATACAAAACTAACTTaGCTCCATGTTGTAGGGATG +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSNTKLT*LHVVGM
Trigger: CATCCCTACAACATGGAGCCAAGTTAGTTTTGTATT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACATCATCACGAACCTTaGTGTTATCAAATGCCAACA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAHHHEP*CYQMPT
Trigger: TGTTGGCATTTGATAACACCAAGGTTCGTGATGATG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTTTGCTGTGTACAAATaGTGGCCATCACAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSFAVYK*WPSQEN
Trigger: ATTTTCTTGTGATGGCCACCATTTGTACACAGCAAA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTAGGCTTAAAACTTGTTaGCTAGTGCATATTGACACA +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSRLKTC*LVHIDT
Trigger: TGTGTCAATATGCACTAGCCAACAAGTTTTAAGCCT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAAGGCTTAAAACTTGTTaGCTAGTGCATATTGACACA +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADERLKTC*LVHIDT
Trigger: TGTGTCAATATGCACTAGCCAACAAGTTTTAAGCCT...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGCTAAAGGAGAATTATaGTTCAAGGTAACGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFAKGEL*FKVTSN
Trigger: GTTTGACGTTACCTTGAATCATAATTCTCCTTTAGC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAAAAGAAGGGCTCTATaGCGATACTTTGAAAACACA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAKRRAL*RYFENT
Trigger: TGTGTTTTCAAAGTATCGTCATAGAGCCCTTCTTTT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAATCCATGATGCTGAATaGATTCTTGAACCAAATCCA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAIHDAE*ILEPNP
Trigger: TGGATTTGGTTCAAGAATTCATTCAGCATCATGGAT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAAAAGTGTATCTGCTTaGATAAGCTTGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAKSVSA*ISLSIT
Trigger: TGTGATGGACAAGCTTATTCAAGCAGATACACTTTT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAACCACTGGCTTTACTTaGACCAATAGATACTTTGAA +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISATTGFT*TNRYFE
Trigger: TTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATTTGACAACATCTTCTaGTTTCTGTCTATCCCTAAG +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAFDNIF*FLSIPK
Trigger: CTTAGGGATAGACAGAAATCAGAAGATGTTGTCAAA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACATAGATTCAAAAGATaGGAGTCGCCAAGTTGTATT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAHRFKR*ESPSCI
Trigger: AATACAACTTGGCGACTCTCATCTTTTGAATCTATG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTACTGTTGTGAACTTTaGATAAAGTTTACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFYCCEL*IKFTGG
Trigger: GCCTCCAGTAAACTTTATTCAAAGTTCACAACAGTA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR TCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATTGGCTAGTGCATATTaGCACAATCTTCCAGATTAT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISALASAY*HNLPDY
Trigger: ATAATCTGGAAGATTGTGTCAATATGCACTAGCCAA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACAATACTCTCTGGCATaGTTGAAAATCAGAATCATC +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAQYSLA*LKIRII
Trigger: GATGATTCTGATTTTCAAGCATGCCAGAGAGTATTG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCTAAATGTTGCCATTTaGTTGGGAGGAAAATATTCT +
Preference number: 4 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSLNVAI*LGGKYS
Trigger: AGAATATTTTCCTCCCAAGCAAATGGCAACATTTAG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTCTCCTGAAAGATCTTaGCATCTATGTGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFSPERS*HLCAKK
Trigger: TTTCTTTGCACATAGATGGCAAGATCTTTCAGGAGA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTTCACAAACAGTTTTTaGAGACTCACAGCTACTGAT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFFTNSF*RLTATD
Trigger: ATCAGTAGCTGTGAGTCTGCAAAAACTGTTTGTGAA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATTTGACTGGGAAAGATaGTCCCTCATTTCAAATAAT +
Preference number: 4 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEFDWER*SLISNN
Trigger: ATTATTTGAAATGAGGGACCATCTTTCCCAGTCAAA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAAACTCTCAAATACATaGGCAAGCACATCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFKLSNT*ASTSSL
Trigger: CAAACTTGATGTGCTTGCCCATGTATTTGAGAGTTT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
3UTR CAA 72 bp AAATATGCCAGTTCCACCAATTTCGTGCAGAATGCCTaGAATAGTTTTATATTCAGTAGGTTGGAGATTCTT +
Preference number: 4 (lower is better)
Translates to: KYASSTNFVQNA*NSFIFSRLEIL
Trigger: AAGAATCTCCAACCTACTGAATATAAAACTATTCAAGGCATTCTGCACGAAATTGGTGGAACTGGCATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
3UTR CAA 72 bp TATTTAGGCTGTGTTCTTAATACCCATGCAAACTTCTaGCATACTGAAGGCTTTCTATTGCAAATTGGTACA +
Preference number: 4 (lower is better)
Translates to: YLGCVLNTHANF*HTEGFLLQIGT
Trigger: TGTACCAATTTGCAATAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAATCCAGCAACATATCTaGTACCTTAGAACAAGAATT +
Preference number: 4 (lower is better)
Translates to: FVNKANHFNVNRSNLISAIQQHI*YLRTRI
Trigger: AATTCTTGTTCTAAGGTAGCAGATATGTTGCTGGAT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTTGTTAACTGTTTTCTaGCAAGCAGCTTTATTCACT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFLLTVF*QAALFT
Trigger: AGTGAATAAAGCTGCTTGGCAGAAAACAGTTAACAA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR GCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGAAGAAAATTCTTCCTaGAGATTAGATCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFEENSS*RLDQMP
Trigger: AGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAATTCAACTCCTCTTTaGAGCACAGGATTAAATATG +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFNSTPL*STGLNM
Trigger: CATATTTAATCCTGTGCTCCAAAGAGGAGTTGAATT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTGGGATGATAAACAATaGCCAATCATGCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFWDDKQ*PIMQNV
Trigger: AACATTTTGCATGATTGGCCATTGTTTATCATCCCA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CCA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCCTAGAATTCTCAGATaGTATAGGTTAGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFPRILR*YRLVET
Trigger: TGTTTCTACTAACCTATACCATCTGAGAATTCTAGG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS TCA 90 bp CCTCCCTGGCCTCCACCCTCTGGACCACTGCATTGCAAAGCCGGTTaGCATCGGTCAGAAATTCACGTGCCAGTGAGTTACTGTCGGTGC +
Preference number: 5 (lower is better)
Translates to: PPWPPPSGPLHCKAG*HRSEIHVPVSYCRC
Trigger: GCACCGACAGTAACTCACTGGCACGTGAATTTCTGACCGATGTCAACCGGCTTTGCAATGCAGTGGTCCAGAGGGTGGAGGCCAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS-3UTR CAA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCGTGATGACACCGCATTaGCTTCCAGTAAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSVMTPH*LPVNSW
Trigger: CCAGCTGTTTACTGGAAGCAAATGCGGTGTCATCAC...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS GCA 90 bp CACAGGGAAACACTGAAACCTTCTGATAGGTGTGGCCAGCAGTTTTaGCCCAGCAACGGCAGGTGGACTGGGGCTATGTGCCAAGATGAA +
Preference number: 5 (lower is better)
Translates to: HRETLKPSDRCGQQF*PSNGRWTGAMCQDE
Trigger: TTCATCTTGGCACATAGCCCCAGTCCACCTGCCGTTGCTGGGGCAAAACTGCTGGCCACACCTATCAGAAGGTTTCAGTGTTTCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGTATCTTCTGAGTCATaGGCCGACTCCCTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVVSSES*ADSLSD
Trigger: GTCTGACAGGGAGTCGGCCAATGACTCAGAAGATAC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTAGATTTGGCCCTTCTGTaGGATCCAACTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVDLALL*DPTAMR
Trigger: CCTCATGGCAGTTGGATCCAACAGAAGGGCCAAATC...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGGACTGGATAAACTaGAGGAGAGTTCAGCATCAC +
Preference number: 5 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSKDWIN*RRVQHH
Trigger: GTGATGCTGAACTCTCCTCAAGTTTATCCAGTCCTT...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTATTCCGTTTCAGTTGCTaGGCTAGGGTTCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVFRFSC*ARVLLA
Trigger: AGCCAAGAGAACCCTAGCCAAGCAACTGAAACGGAA...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS TCA 90 bp TGCATTGCAAAGCCGGTTGACATCGGTCAGAAATTCACGTGCCAGTaGGTTACTGTCGGTGCTCATGACCGAGCAGTCTTTCACCACTGC +
Preference number: 5 (lower is better)
Translates to: CIAKPVDIGQKFTCQ*VTVGAHDRAVFHHC
Trigger: GCAGTGGTGAAAGACTGCTCGGTCATGAGCACCGACAGTAACTCACTGGCACGTGAATTTCTGACCGATGTCAACCGGCTTTGCAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS GCA 90 bp TCCAACCTGCAGAAACTACTCGACTCTCCAAGTTGTCGCTCAGACTaGAGCAGTCCCCAAAGCCTGCTAGGAATTCAGTTAGTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SNLQKLLDSPSCRSD*SSPQSLLGIQLVWA
Trigger: TGCCCACACTAACTGAATTCCTAGCAGGCTTTGGGGACTGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGTAGTTTCTGCAGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTATCGAAAGAGCATCCTTaGAATCAAAGCCACCGGTTC +
Preference number: 5 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVSKEHP*NQSHRF
Trigger: GAACCGGTGGCTTTGATTCAAAGGATGCTCTTTCGA...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTATCGCCATCTTCAGGATaGCTTTCACTATCTGCTTCG +
Preference number: 5 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVSPSSG*LSLSAS
Trigger: CGAAGCAGATAGTGAAAGCAATCCTGAAGATGGCGA...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCGTGACAAACCACAGATaGCTCTGGTGGGCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIVTNHR*LWWAEP
Trigger: AGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCAC...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCCATGCTTCTCACACCTaGTTCCTTGCTATATGTCAT +
Preference number: 5 (lower is better)
Translates to: CTGGMGSSSLAPLRYSSSHASHT*FLAICH
Trigger: ATGACATATAGCAAGGAACAAGGTGTGAGAAGCATG...GGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAGTCTGTGCCTTTTTCTaGTACACATCGAATGATGAA +
Preference number: 5 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSVCAFF*YTSNDE
Trigger: TTCATCATTCGATGTGTACAAGAAAAAGGCACAGAC...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTACAATTCCATCTTCTGTaGACTAGTTCTGGCACCATG +
Preference number: 5 (lower is better)
Translates to: GRHGVIFSGSFAVLFLQVQFHLL*TSSGTM
Trigger: CATGGTGCCAGAACTAGTCAACAGAAGATGGAATTG...TACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGCTGTGACAGGGCTTTaGTGTCCCGCCAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILAVTGL*CPARLC
Trigger: ACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCCCCCCAGCGATTACATaGATAGATACTCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIPPAIT*IDTPSG
Trigger: GCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGG...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGGGAAGGAATAGAACATaGGCTGTTTCAAGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: TINPGLIRDLPPLLECLRGRNRT*AVSSAA
Trigger: AGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCC...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS GCA 90 bp AAAGAGCATCCTTTGAATCAAAGCCACCGGTTCTTCGGTCCAACCTaGAGAAACTACTCGACTCTCCAAGTTGTCGCTCAGACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KEHPLNQSHRFFGPT*RNYSTLQVVAQTAA
Trigger: TGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGTAGTTTCTGCAGGTTGGACCGAAGAACCGGTGGCTTTGATTCAAAGGATGCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 90 bp AAGCCTGCTGTAGTAAGCGCAAGCACTGATGGGCACACACTGCAATaGAACAGCACCGCTCAGGATAATAAACATCTCCATCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: KPAVVSASTDGHTLQ*NSTAQDNKHLHLQS
Trigger: AGACTGCAGATGGAGATGTTTATTATCCTGAGCGGTGCTGTTGCATTGCAGTGTGTGCCCATCAGTGCTTGCGCTTACTACAGCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCACTCGACTCTCCAAGTaGTCGCTCAGACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFTRLSK*SLRLQQ
Trigger: CTGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGCTGGGCAGGATCCCTaGAAATCTGTAAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDAGQDP*KSVRRT
Trigger: AGTCCTTCTTACAGATTTCAAGGGATCCTGCCCAGC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGGGATCAGCCCACACTaGGATCATCAACGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILGISPH*DHQRFG
Trigger: TCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCCC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACTTCTATCAACAAGACTaGGCCAACGGCCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDFYQQD*ANGQQL
Trigger: CAGCTGTTGGCCGTTGGCCAAGTCTTGTTGATAGAA...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTTGGCTCATTCTCCGTaGCATCATCACATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVLAHSP*HHHMKL
Trigger: GAGCTTCATGTGATGATGCAACGGAGAATGAGCCAA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGCTGTTTCAAGCGCTGCTGGTCCTTCCGACACCAGGCAATCACGGTCCCATCAAAATACAAAACTAACTaGGCTCCATGTTGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: GCFKRCWSFRHQAITVPSKYKTN*APCCRD
Trigger: ATCCCTACAACATGGAGCCAAGTTAGTTTTGTATTT...TGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCCCTTCAATATTGAGCTaGGCTCCAGGTCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIPSILS*APGLLT
Trigger: TGTGAGCAGACCTGGAGCCAAGCTCAATATTGAAGG...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS GCA 90 bp ATATTCCAATGTTATGAACACCCGATAGGATCTGGACACAAGTGCTaGTCAAGGAAGCCTGCTGTAGTAAGCGCAAGCACTGATGGGCAC +
Preference number: 5 (lower is better)
Translates to: IFQCYEHPIGSGHKC*SRKPAVVSASTDGH
Trigger: GTGCCCATCAGTGCTTGCGCTTACTACAGCAGGCTTCCTTGAGCAGCACTTGTGTCCAGATCCTATCGGGTGTTCATAACATTGGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 90 bp AGCATATTCCAATGTTATGAACACCCGATAGGATCTGGACACAAGTaGTGCTCAAGGAAGCCTGCTGTAGTAAGCGCAAGCACTGATGGG +
Preference number: 5 (lower is better)
Translates to: SIFQCYEHPIGSGHK*CSRKPAVVSASTDG
Trigger: CCCATCAGTGCTTGCGCTTACTACAGCAGGCTTCCTTGAGCAGCACTTGTGTCCAGATCCTATCGGGTGTTCATAACATTGGAATATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 90 bp TTGAGTCAAACAGCCCAAACCCCATTAGATGGCAAGGGAAAATACTaGTGTACTCTGATGTCACCCGAGGAAGACACGGGAACAGATGGT +
Preference number: 5 (lower is better)
Translates to: LSQTAQTPLDGKGKY*CTLMSPEEDTGTDG
Trigger: ACCATCTGTTCCCGTGTCTTCCTCGGGTGACATCAGAGTACAGCAGTATTTTCCCTTGCCATCTAATGGGGTTTGGGCTGTTTGACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465349.5
ENST00000468107.5
ENST00000489585.5
CDS CCA 90 bp GCTCGCTGGCTGTGCTGTCATAGCCAGAAGTATCTTCTGAGTCATTaGCCGACTCCCTGTCAGACTCTGCTTCTTTACTTACGCATAAAA +
Preference number: 5 (lower is better)
Translates to: ARWLCCHSQKYLLSH*PTPCQTLLLYLRIK
Trigger: TTTTATGCGTAAGTAAAGAAGCAGAGTCTGACAGGGAGTCGGCCAATGACTCAGAAGATACTTCTGGCTATGACAGCACAGCCAGCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGAAAGCTTCACCTGGTTaGTGGCAGCTGCGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEKASPG*WQLRPP
Trigger: CGGCGGCCGCAGCTGCCACAAACCAGGTGAAGCTTT...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGTTACACTGTGAGCACTaGCAGTTCGGTTGTAATTTG +
Preference number: 5 (lower is better)
Translates to: TINPGLIRDLPPLLECLRLHCEH*QFGCNL
Trigger: CAAATTACAACCGAACTGCAAGTGCTCACAGTGTAA...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGTTGGCTAGGGTTCTCTaGGCTCATTCTCCGTTGCAT +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLARVL*AHSPLH
Trigger: ATGCAACGGAGAATGAGCCAAGAGAACCCTAGCCAA...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGGTGATGACACCGCATTaGCTTCCAGTAAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILVMTPH*LPVNSW
Trigger: CCAGCTGTTTACTGGAAGCAAATGCGGTGTCATCAC...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGACCCATGCAAACTTCTaGCATACTGAAGGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: TINPGLIRDLPPLLECLRTHANF*HTEGFL
Trigger: TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS GCA 90 bp ATGAAAGCAGCCGATGGGGAAAACTCTCTCTATCAGCCTCTTTCTTaGTCCGTGAAACTCGTGCTCTTCTCAATAAACCCATGGCCTTAC +
Preference number: 5 (lower is better)
Translates to: MKAADGENSLYQPLS*SVKLVLFSINPWPY
Trigger: GTAAGGCCATGGGTTTATTGAGAAGAGCACGAGTTTCACGGAGCAAGAAAGAGGCTGATAGAGAGAGTTTTCCCCATCGGCTGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGAACCAGCCATTCCATTaGAAGAACTGCTGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: TINPGLIRDLPPLLECLRNQPFH*KNCCFK
Trigger: TTTGAAACAGCAGTTCTTCAAATGGAATGGCTGGTT...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGTGTGGCCAGCAGTTTaGCCCCAGCAACGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSVWPAV*PQQRQV
Trigger: CACCTGCCGTTGCTGGGGCAAAACTGCTGGCCACAC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGGGCATGGGTGTGAGTaGCCCCTCTTTGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIGHGCE*PLFVFL
Trigger: CAGGAATACAAAGAGGGGCAACTCACACCCATGCCC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGATTGGCTAGGGTTCTCTaGGCTCATTCTCCGTTGCAT +
Preference number: 5 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGLARVL*AHSPLH
Trigger: ATGCAACGGAGAATGAGCCAAGAGAACCCTAGCCAA...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTTCCGTTTCAGTTGCTaGGCTAGGGTTCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFFRFSC*ARVLLA
Trigger: AGCCAAGAGAACCCTAGCCAAGCAACTGAAACGGAA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGTGACAAACCACAGATaGCTCTGGTGGGCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIVTNHR*LWWAEP
Trigger: AGGCTCTGCCCACCAGAGCAATCTGTGGTTTGTCAC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS CCA 90 bp CAGATCCACTGCTGGGCAGGATCCCTTGAAATCTGTAAGAAGGACTaGATAAACTTGAGGAGAGTTCAGCATCACATAAGTTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: QIHCWAGSLEICKKD*INLRRVQHHISFPA
Trigger: TGCAGGGAAACTTATGTGATGCTGAACTCTCCTCAAGTTTATCCAGTCCTTCTTACAGATTTCAAGGGATCCTGCCCAGCAGTGGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAAAGCTTCACCTGGTTaGTGGCAGCTGCGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAKASPG*WQLRPP
Trigger: CGGCGGCCGCAGCTGCCACAAACCAGGTGAAGCTTT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGCATTGCAAAGCCGGTaGACATCGGTCAGAAATTCA +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFALQSR*TSVRNS
Trigger: TGAATTTCTGACCGATGTCAACCGGCTTTGCAATGC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGTACTGTCCAAGGGTaGCCATGTGCGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGTVQG*PCASPP
Trigger: AGGAGGAGACGCACATGGCAACCCTTGGACAGTACC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGAAGGACTGGATAAACTaGAGGAGAGTTCAGCATCAC +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILKDWIN*RRVQHH
Trigger: GTGATGCTGAACTCTCCTCAAGTTTATCCAGTCCTT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGACCAAATGTCTGCTGCTaGGTGCATATGTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGPNVCC*VHMFRR
Trigger: TCTCCTGAACATATGCACCAAGCAGCAGACATTTGG...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCTACTCTCTGGCATGCTaGAAAATCAGAATCATCCTG +
Preference number: 5 (lower is better)
Translates to: HTRKIRVALWGSAHTWIIYSLAC*KIRIIL
Trigger: CAGGATGATTCTGATTTTCAAGCATGCCAGAGAGTA...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp ATGGATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGGGTCTTTGAGAGAGTaGGGTTTTCATTTGACCTTT +
Preference number: 5 (lower is better)
Translates to: MDEDKKTRIITRPRGKVDGSLRE*GFHLTF
Trigger: AAAGGTCAAATGAAAACCCAACTCTCTCAAAGACCC...GTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGTTTTCTCTCATTTCCTaGGGAGAGAGACACTGCCTG +
Preference number: 5 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQFSLIS*GERHCL
Trigger: CAGGCAGTGTCTCTCTCCCAAGGAAATGAGAGAAAA...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACCCCCAGCGATTACATaGATAGATACTCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIPPAIT*IDTPSG
Trigger: GCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp ACCATAAATCCAGGGCTCATAAGGGACCTTCCTCCACTGCTGGAATGCCTCAGGGTCAACAAATCTAGTTaGGAGTTAAAGTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: TINPGLIRDLPPLLECLRVNKSS*ELKCFG
Trigger: TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGAC...CCTGAGGCATTCCAGCAGTGGAGGAAGGTCCCTTATGAGCCCTGGATTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGATCTGGTCTGTCGCTCTaGTACAAGGAGATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGSGLSL*YKEISP
Trigger: TGGAGAAATCTCCTTGTACAAGAGCGACAGACCAGA...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS TCA 90 bp ACATCTACTGACAGAAGATGCAACACTGTTCGAAAGAGCATCCTTTaGATCAAAGCCACCGGTTCTTCGGTCCAACCTGCAGAAACTACT +
Preference number: 5 (lower is better)
Translates to: TSTDRRCNTVRKSIL*IKATGSSVQPAETT
Trigger: AGTAGTTTCTGCAGGTTGGACCGAAGAACCGGTGGCTTTGATTCAAAGGATGCTCTTTCGAACAGTGTTGCATCTTCTGTCAGTAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGGTACTGTCCAAGGGTaGCCATGTGCGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEGTVQG*PCASPP
Trigger: AGGAGGAGACGCACATGGCAACCCTTGGACAGTACC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAACTCGACTCTCCAAGTaGTCGCTCAGACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGTRLSK*SLRLQQ
Trigger: CTGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAAGATAAGAGTGGCATaGTGGGGATCAGCCCACACT +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIKIRVA*WGSAHT
Trigger: AGTGTGGGCTGATCCCCACAATGCCACTCTTATCTT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCCAGAAGCGATTCAGTTaGAGCAAGGGGAAATTTTCG +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFQKRFS*SKGKFS
Trigger: CGAAAATTTCCCCTTGCTCAAACTGAATCGCTTCTG...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GATGAGGATAAAAAGACGAGGATCATTACGCGCCCAAGGGGGAAGGTTGACGTGTTCAGTCAATTCACCTaGGTGATTATGTATCAACTC +
Preference number: 5 (lower is better)
Translates to: DEDKKTRIITRPRGKVDVFSQFT*VIMYQL
Trigger: GAGTTGATACATAATCACCAAGGTGAATTGACTGAA...CACGTCAACCTTCCCCCTTGGGCGCGTAATGATCCTCGTCTTTTTATCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CACACACGAAAGATAAGAGTGGCATTGTGGGGATCAGCCCACACTTGGATCATCCTTGCAGCTTTGTCTTaGACAGTAGAAGAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: HTRKIRVALWGSAHTWIILAALS*TVEEKE
Trigger: TTCTTTCTCTTCTACTGTCAAAGACAAAGCTGCAAG...GATGATCCAAGTGTGGGCTGATCCCCACAATGCCACTCTTATCTTTCGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGAGAAGCCTTCCCCTTTaGCTTATACCCAAACACCAA +
Preference number: 5 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQRSLPL*LIPKHQ
Trigger: TTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCT...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS CCA 90 bp GGGGCCTTCTATGCTTATTCATTGCTATGCCTTTTTCATCTGAATTaGCTTCTGAATCTGAGGTGGAGAGCTGTGTCTTTCTTGCATCTC +
Preference number: 5 (lower is better)
Translates to: GAFYAYSLLCLFHLN*LLNLRWRAVSFLHL
Trigger: GAGATGCAAGAAAGACACAGCTCTCCACCTCAGATTCAGAAGCCAATTCAGATGAAAAAGGCATAGCAATGAATAAGCATAGAAGGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACTCTGGACCACTGCATaGCAAAGCCGGTTGACATCG +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADELWTTA*QSRLTS
Trigger: CGATGTCAACCGGCTTTGCAATGCAGTGGTCCAGAG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTCGGAATGATTACAGATTaGGGATCCATACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILGMITD*GSIQQH
Trigger: ATGCTGTTGTATGGATCCCAAATCTGTAATCATTCC...GAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGGATCAGCCCACACTaGGATCATCAACGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGISPH*DHQRFG
Trigger: TCCAAAGCGTTGATGATCCAAGTGTGGGCTGATCCC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACCAACCTTAGCTCCGTaGAAGAGAAGCAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIPTLAP*KRSKFP
Trigger: GGGAAATTTGCTTCTCTTCAACGGAGCTAAGGTTGG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAATTACAGATGTATGGTaGGGTCCACAAGCATACAGA +
Preference number: 5 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGITDVW*GPQAYR
Trigger: TCTGTATGCTTGTGGACCCAACCATACATCTGTAAT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGGGCATGGGTGTGAGTaGCCCCTCTTTGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSGHGCE*PLFVFL
Trigger: CAGGAATACAAAGAGGGGCAACTCACACCCATGCCC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGCATGAAGCTCATCATTaGCCACTGAACGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQHEAHH*PLNAFS
Trigger: TGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATG...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATTGGCTCATTCTCCGTaGCATCATCACATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILAHSP*HHHMKL
Trigger: GAGCTTCATGTGATGATGCAACGGAGAATGAGCCAA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACATTAGTCCATTGCTGCTaGGAACCACTGGCTTTACTT +
Preference number: 5 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTLVHCC*EPLALL
Trigger: AAGTAAAGCCAGTGGTTCCAAGCAGCAATGGACTAA...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATTTTCTCTCATTTCCTaGGGAGAGAGACACTGCCTG +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIFSLIS*GERHCL
Trigger: CAGGCAGTGTCTCTCTCCCAAGGAAATGAGAGAAAA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGATTTGGCCCTTCTGTaGGATCCAACTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLDLALL*DPTAMR
Trigger: CCTCATGGCAGTTGGATCCAACAGAAGGGCCAAATC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGCTTGCAGCTTTGTCTTaGACAGTAGAAGAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILLAALS*TVEEKE
Trigger: TTCTTTCTCTTCTACTGTCAAAGACAAAGCTGCAAG...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAACATCATCACGAACCTaGGTGTTATCAAATGCCAAC +
Preference number: 5 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGTSSRT*VLSNAN
Trigger: GTTGGCATTTGATAACACCAAGGTTCGTGATGATGT...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGCGGTCCCATCACTGTTaGCTGTGTACAAATGGTGGC +
Preference number: 5 (lower is better)
Translates to: LRFTLIDSLAALSLTVEERSHHC*LCTNGG
Trigger: GCCACCATTTGTACACAGCAAACAGTGATGGGACCG...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS TCA 90 bp ATGATTACAGATTTGGGATCCATACAACAGCATATTCCAATGTTATaGACACCCGATAGGATCTGGACACAAGTGCTGCTCAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: MITDLGSIQQHIPML*TPDRIWTQVLLKEA
Trigger: GGCTTCCTTGAGCAGCACTTGTGTCCAGATCCTATCGGGTGTTCATAACATTGGAATATGCTGTTGTATGGATCCCAAATCTGTAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 90 bp AGAAACCTCGGAATACAACTTTCCCACGTAAGAATGAATAAACACTaGAAGAGGCCAAAACCCCAAACACTCTGGTATGAGGACTGCTCT +
Preference number: 5 (lower is better)
Translates to: RNLGIQLSHVRMNKH*KRPKPQTLWYEDCS
Trigger: AGAGCAGTCCTCATACCAGAGTGTTTGGGGTTTTGGCCTCTTTCAGTGTTTATTCATTCTTACGTGGGAAAGTTGTATTCCGAGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465349.5
ENST00000468107.5
ENST00000489585.5
CDS CCA 90 bp TCAATTATAGAATTTAGCTTGGTAAGTAATAGAAATCCTCGACCATaGACAAGGTACTGTCCAAGGGTTGCCATGTGCGTCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SIIEFSLVSNRNPRP*TRYCPRVAMCVSSS
Trigger: AGAGGAGGAGACGCACATGGCAACCCTTGGACAGTACCTTGTCCATGGTCGAGGATTTCTATTACTTACCAAGCTAAATTCTATAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGCTGGGCAGGATCCCTaGAAATCTGTAAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGAGQDP*KSVRRT
Trigger: AGTCCTTCTTACAGATTTCAAGGGATCCTGCCCAGC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGTTGATATGAACATCTaGGTTAACAGTCTTCCGTCT +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFVDMNI*VNSLPS
Trigger: AGACGGAAGACTGTTAACCAAGATGTTCATATCAAC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGTATCTTCTGAGTCATaGGCCGACTCCCTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSVSSES*ADSLSD
Trigger: GTCTGACAGGGAGTCGGCCAATGACTCAGAAGATAC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACTATCAGCCTCTTTCTaGCTCCGTGAAACTCGTGCT +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLSASF*LRETRA
Trigger: AGCACGAGTTTCACGGAGCAAGAAAGAGGCTGATAG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAATGGGCGGCCATCTGTaGTGGAATAATATTAGAGGA +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIMGGHL*WNNIRG
Trigger: TCCTCTAATATTATTCCACAACAGATGGCCGCCCAT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATTCTATCAACAAGACTaGGCCAACGGCCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGFYQQD*ANGQQL
Trigger: CAGCTGTTGGCCGTTGGCCAAGTCTTGTTGATAGAA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGGAGTGTTCTGCCATTaGTTAGAAAGATTTCTACAG +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFGVFCH*LERFLQ
Trigger: CTGTAGAAATCTTTCTAACAAATGGCAGAACACTCC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGCTGTGACAGGGCTTTaGTGTCCCGCCAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFAVTGL*CPARLC
Trigger: ACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCGGTCCCATCACTGTTaGCTGTGTACAAATGGTGGC +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSRSHHC*LCTNGG
Trigger: GCCACCATTTGTACACAGCAAACAGTGATGGGACCG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CAGACAGCCATCATATGGGAGAGACAGACGGCTCCAAGATGTTTAGGAATTCTGACTGAAGGCTTTCTATaGCAAATTGGTACAGATTCA +
Preference number: 5 (lower is better)
Translates to: QTAIIWERQTAPRCLGILTEGFL*QIGTDS
Trigger: TGAATCTGTACCAATTTGCAATAGAAAGCCTTCAGT...CAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS GCA 90 bp ACAGTGCTCATTATTTTCATCACACTATTTATTAGGGCTTTCAAATaGTCTGAGGCCTCGGGAGGAACTCCATCTCTTAAAACCAGCCAT +
Preference number: 5 (lower is better)
Translates to: TVLIIFITLFIRAFK*SEASGGTPSLKTSH
Trigger: ATGGCTGGTTTTAAGAGATGGAGTTCCTCCCGAGGCCTCAGAGCATTTGAAAGCCCTAATAAATAGTGTGATGAAAATAATGAGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 90 bp CCAGGATACTTTTGTGATGAAACACCGTTGCTTAAATTTGGAGCGTaGAGTAAAGGGAAGGTTAGATACTGTGAAGGGCTCATAGTAGTA +
Preference number: 5 (lower is better)
Translates to: PGYFCDETPLLKFGA*SKGKVRYCEGLIVV
Trigger: TACTACTATGAGCCCTTCACAGTATCTAACCTTCCCTTTACTGCACGCTCCAAATTTAAGCAACGGTGTTTCATCACAAAAGTATCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 90 bp AATACATCCTTCTTCTATGAGTCTTTCACCAGGATTTATGTACTCTaGACCTTCTGGTCTGTCGCTCTCTGTACCATCAAAACTGCTATC +
Preference number: 5 (lower is better)
Translates to: NTSFFYESFTRIYVL*TFWSVALCTIKTAI
Trigger: GATAGCAGTTTTGATGGTACAGAGAGCGACAGACCAGAAGGTGCAGAGTACATAAATCCTGGTGAAAGACTCATAGAAGAAGGATGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000489585.5
CDS GCA 90 bp AATACATCCTTCTTCTATGAGTCTTTCACCAGGATTTATGTACTCTaGACCTTCTGGTCTGTCGCTCTTGTACAAGGAGATTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: NTSFFYESFTRIYVL*TFWSVALVQGDFSR
Trigger: TCTGGAGAAATCTCCTTGTACAAGAGCGACAGACCAGAAGGTGCAGAGTACATAAATCCTGGTGAAAGACTCATAGAAGAAGGATGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS CCA 90 bp CCTCTTTCTTGCTCCGTGAAACTCGTGCTCTTCTCAATAAACCCATaGCCTTACTGTTTAAAATCCCAGGATACTTTTGTGATGAAACAC +
Preference number: 5 (lower is better)
Translates to: PLSCSVKLVLFSINP*PYCLKSQDTFVMKH
Trigger: GTGTTTCATCACAAAAGTATCCTGGGATTTTAAACAGTAAGGCCATGGGTTTATTGAGAAGAGCACGAGTTTCACGGAGCAAGAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATCGCCATCTTCAGGATaGCTTTCACTATCTGCTTCG +
Preference number: 5 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLSPSSG*LSLSAS
Trigger: CGAAGCAGATAGTGAAAGCAATCCTGAAGATGGCGA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTGCAAGCACATCAAGTTaGGCTTTACTAGCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPASTSS*ALLAES
Trigger: GCTTTCTGCTAGTAAAGCCAAACTTGATGTGCTTGC...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATTACACTGTGAGCACTaGCAGTTCGGTTGTAATTTG +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILHCEH*QFGCNL
Trigger: CAAATTACAACCGAACTGCAAGTGCTCACAGTGTAA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAAGCCTTCCCCTTTTGCTTATACCCAAACACCAAGTCAATCCACTGACACAAAAGTGTATCTGCTaGAATAAGCTTGTCCATCAC +
Preference number: 5 (lower is better)
Translates to: NRSLPLLLIPKHQVNPLTQKCIC*NKLVHH
Trigger: GTGATGGACAAGCTTATTCAAGCAGATACACTTTTG...TGTCAGTGGATTGACTTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCAACTGCTATGAAAAGTaGCTGTATATCACAAGCAAG +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFNCYEK*LYITSK
Trigger: CTTGCTTGTGATATACAGCAACTTTTCATAGCAGTT...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TATACCCAAACACCAAGTCAATCCACTGACAGATGTTCTGCGACACGTAGTCAGAACTGCTATGAAAAGTaGCTGTATATCACAAGCAAG +
Preference number: 5 (lower is better)
Translates to: YTQTPSQSTDRCSATRSQNCYEK*LYITSK
Trigger: CTTGCTTGTGATATACAGCAACTTTTCATAGCAGTT...CTGACTACGTGTCGCAGAACATCTGTCAGTGGATTGACTTGGTGTTTGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTCAGAAGCGATTCAGTTaGAGCAAGGGGAAATTTTCG +
Preference number: 5 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPQKRFS*SKGKFS
Trigger: CGAAAATTTCCCCTTGCTCAAACTGAATCGCTTCTG...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCAACTGCCATGAGGTaGGATAGTAGATGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPTAMR*DSRWGH
Trigger: ATGACCCCATCTACTATCCAACCTCATGGCAGTTGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTAGCATTATCTCTCAATaGCCACCAACGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPSIISQ*PPTLVN
Trigger: GTTCACAAGCGTTGGTGGCAATTGAGAGATAATGCT...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCTTCAATATTGAGCTaGGCTCCAGGTCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPSILS*APGLLT
Trigger: TGTGAGCAGACCTGGAGCCAAGCTCAATATTGAAGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGTCAACAAATCTAGTTaGGAGTTAAAGTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFVNKSS*ELKCFG
Trigger: TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGAC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCTATTCCATAAAATATTaGGTACAGAGGCACCTACTG +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFYSIKY*VQRHLL
Trigger: CAGTAGGTGCCTCTGTACCAAATATTTTATGGAATA...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTCCATGGACCTCAGGATTCGCTTTCTATTGCAAATaGGTACAGATTCAATGCTCT +
Preference number: 5 (lower is better)
Translates to: FNVNRSNLISAPPWTSGFAFYCK*VQIQCS
Trigger: AGAGCATTGAATCTGTACCAATTTGCAATAGAAAGC...GAATCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GCTTCTAGAACGCAGCATATGGGCGGCCATCTGTTGTGGAATAATATTAGAGGAGCTTTCTATTGCAAATaGGTACAGATTCAATGCTCT +
Preference number: 5 (lower is better)
Translates to: ASRTQHMGGHLLWNNIRGAFYCK*VQIQCS
Trigger: AGAGCATTGAATCTGTACCAATTTGCAATAGAAAGC...TCCTCTAATATTATTCCACAACAGATGGCCGCCCATATGCTGCGTTCTAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS GCA 90 bp ACTTTAAGTCTACCCCATCATCCTGGGTTTCGCCATCTTCAGGATTaGTTTCACTATCTGCTTCGTAACCTTCTTCTTCAACTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: TLSLPHHPGFRHLQD*FHYLLRNLLLQLKV
Trigger: AACTTTTAGTTGAAGAAGAAGGTTACGAAGCAGATAGTGAAAGCAATCCTGAAGATGGCGAAACCCAGGATGATGGGGTAGACTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTGCATTGCAAAGCCGGTaGACATCGGTCAGAAATTCA +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSALQSR*TSVRNS
Trigger: TGAATTTCTGACCGATGTCAACCGGCTTTGCAATGC...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCGGTCAAGTTTAGCTTaGGGGTGGTCTTGTTTAGGA +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSRSSLA*GWSCLG
Trigger: TCCTAAACAAGACCACCCCAAAGCTAAACTTGACCG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACGGTCAAGTTTAGCTTaGGGGTGGTCTTGTTTAGGA +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADERSSLA*GWSCLG
Trigger: TCCTAAACAAGACCACCCCAAAGCTAAACTTGACCG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAATCGAAAGAGCATCCTTaGAATCAAAGCCACCGGTTC +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADESKEHP*NQSHRF
Trigger: GAACCGGTGGCTTTGATTCAAAGGATGCTCTTTCGA...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACTGCAGTGTTTTCTTTaGTCTTGGTGCAAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLQCFL*SWCKRV
Trigger: GACCCTTTTGCACCAAGACAAAAGAAAACACTGCAG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAAACCAGCCATTCCATTaGAAGAACTGCTGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIINQPFH*KNCCFK
Trigger: TTTGAAACAGCAGTTCTTCAAATGGAATGGCTGGTT...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGTCTGTGCCTTTTTCTaGTACACATCGAATGATGAA +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIVCAFF*YTSNDE
Trigger: TTCATCATTCGATGTGTACAAGAAAAAGGCACAGAC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAAGTGTTTCAATCACCTTaGACTGGGAAAGATGGTCCC +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEVFQSP*TGKDGP
Trigger: GGGACCATCTTTCCCAGTCAAAGGTGATTGAAACAC...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAGCAAGCACATCAAGTTaGGCTTTACTAGCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGASTSS*ALLAES
Trigger: GCTTTCTGCTAGTAAAGCCAAACTTGATGTGCTTGC...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACACCGTTGCTTAAATTaGGAGCGTGCAGTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEHRCLN*ERAVKG
Trigger: TCCCTTTACTGCACGCTCCAAATTTAAGCAACGGTG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTATGTGATGAAACACCGTaGCTTAAATTTGGAGCGTGC +
Preference number: 5 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLCDETP*LKFGAC
Trigger: GCACGCTCCAAATTTAAGCAACGGTGTTTCATCACA...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAAAGATAAGAGTGGCATaGTGGGGATCAGCCCACACT +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAKIRVA*WGSAHT
Trigger: AGTGTGGGCTGATCCCCACAATGCCACTCTTATCTT...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCCAACCTTAGCTCCGTaGAAGAGAAGCAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSPTLAP*KRSKFP
Trigger: GGGAAATTTGCTTCTCTTCAACGGAGCTAAGGTTGG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAATGGGCGGCCATCTGTaGTGGAATAATATTAGAGGA +
Preference number: 5 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLMGGHL*WNNIRG
Trigger: TCCTCTAATATTATTCCACAACAGATGGCCGCCCAT...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATACAAAAGTGTATCTGCTaGAATAAGCTTGTCCATCAC +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIQKCIC*NKLVHH
Trigger: GTGATGGACAAGCTTATTCAAGCAGATACACTTTTG...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATGCAACAGCCATATTTaGTGTCCTCTTGTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIICNSHI*CPLVFA
Trigger: AGCAAAAACAAGAGGACACAAAATATGGCTGTTGCA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAAATGCTTTTCCGCTTTaGAACTACTGCATGATGGGG +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGNAFPL*NYCMMG
Trigger: CCCCATCATGCAGTAGTTCAAAAGCGGAAAAGCATT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATTAGTCCATTGCTGCTaGGAACCACTGGCTTTACTT +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGLVHCC*EPLALL
Trigger: AAGTAAAGCCAGTGGTTCCAAGCAGCAATGGACTAA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCCAACTGCCATGAGGTaGGATAGTAGATGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFPTAMR*DSRWGH
Trigger: ATGACCCCATCTACTATCCAACCTCATGGCAGTTGG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATAGGAGTGTTCTGCCATTaGTTAGAAAGATTTCTACAG +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIIGVFCH*LERFLQ
Trigger: CTGTAGAAATCTTTCTAACAAATGGCAGAACACTCC...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS TCA 90 bp CATCAATATCTGGAACTGAGGCATCTTTCTGTTGCTCCCCTAGGCTaGTTATCAGAGTTTCAAATGCTTTTAGAGAATGACTTCGAATAC +
Preference number: 5 (lower is better)
Translates to: HQYLELRHLSVAPLG*LSEFQMLLENDFEY
Trigger: GTATTCGAAGTCATTCTCTAAAAGCATTTGAAACTCTGATAATCAGCCTAGGGGAGCAACAGAAAGATGCCTCAGTTCCAGATATTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 90 bp GCCCACACTTGGATCATCAACGCTTTGGATCCCAGTGAAATTATATaGATACATCCTTCTTCTATGAGTCTTTCACCAGGATTTATGTAC +
Preference number: 5 (lower is better)
Translates to: AHTWIINALDPSEII*IHPSSMSLSPGFMY
Trigger: GTACATAAATCCTGGTGAAAGACTCATAGAAGAAGGATGTATTCATATAATTTCACTGGGATCCAAAGCGTTGATGATCCAAGTGTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000489585.5
ENST00000492844.1
CDS GCA 90 bp CCTTACTGTTTAAAATCCCAGGATACTTTTGTGATGAAACACCGTTaGTTAAATTTGGAGCGTGCAGTAAAGGGAAGGTTAGATACTGTG +
Preference number: 5 (lower is better)
Translates to: PYCLKSQDTFVMKHR*LNLERAVKGRLDTV
Trigger: CACAGTATCTAACCTTCCCTTTACTGCACGCTCCAAATTTAAGCAACGGTGTTTCATCACAAAAGTATCCTGGGATTTTAAACAGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS CCA 90 bp AGACACAAAGATATGATTATCTTGAAAAGAAGAGGGTCAGCAGGCTaGAGAGTTAATCAGAATCAAGTTGTAATGGCAAAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: RHKDMIILKRRGSAG*RVNQNQVVMAKKSG
Trigger: CCCAGACTTCTTTGCCATTACAACTTGATTCTGATTAACTCTCCAGCCTGCTGACCCTCTTCTTTTCAAGATAATCATATCTTTGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473037.5
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACCAAATGTCTGCTGCTaGGTGCATATGTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAPNVCC*VHMFRR
Trigger: TCTCCTGAACATATGCACCAAGCAGCAGACATTTGG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAATTACAGATGTATGGTaGGGTCCACAAGCATACAGA +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGITDVW*GPQAYR
Trigger: TCTGTATGCTTGTGGACCCAACCATACATCTGTAAT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CATTGCTGCTTGGAACCACTGGCTTTACTTGAACCAATAGATACTTTGAATCCTCCCAACAATGCATTTTaGTTTGATCAACACCTGATG +
Preference number: 5 (lower is better)
Translates to: HCCLEPLALLEPIDTLNPPNNAF*FDQHLM
Trigger: CATCAGGTGTTGATCAAACAAAAATGCATTGTTGGG...AGGATTCAAAGTATCTATTGGTTCAAGTAAAGCCAGTGGTTCCAAGCAGCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp TGGCCACGTGCTTTCTCTCGAATCTATCTTGACAGCAGAGACTTTGGAATTATATTATGCAAGAGTATGTaGTCATATAGAGAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: WPRAFSRIYLDSRDFGIILCKSM*SYREVS
Trigger: AGAGACCTCTCTATATGACAACATACTCTTGCATAA...TATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCAGGAAGGAATAGAACATaGGCTGTTTCAAGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAGRNRT*AVSSAA
Trigger: AGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCC...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAACCCATGCAAACTTCTaGCATACTGAAGGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGTHANF*HTEGFL
Trigger: TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS TCA 90 bp TTTCCTAAGATTTTCTGGCATCATCTCTGCAGTACTAACATCTACTaGCAGAAGATGCAACACTGTTCGAAAGAGCATCCTTTGAATCAA +
Preference number: 5 (lower is better)
Translates to: FPKIFWHHLCSTNIY*QKMQHCSKEHPLNQ
Trigger: TTGATTCAAAGGATGCTCTTTCGAACAGTGTTGCATCTTCTGTCAGTAGATGTTAGTACTGCAGAGATGATGCCAGAAAATCTTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACCTTTTTCATCTGAATaGGCTTCTGAATCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADEPFSSE*ASESEV
Trigger: CACCTCAGATTCAGAAGCCAATTCAGATGAAAAAGG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACTGCAGTGTTTTCTTTaGTCTTGGTGCAAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISALQCFL*SWCKRV
Trigger: GACCCTTTTGCACCAAGACAAAAGAAAACACTGCAG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAATGCTGAATGAATTCTaGAACCAAATCCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGMLNEF*NQIHGL
Trigger: CAAGCCATGGATTTGGTTCAAGAATTCATTCAGCAT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTAGGCTGTGTTCTTAATACCCATGCAAACTTCTTGCATACTGAAGGCTTTCTAGGAATGATTACAGATTaGGGATCCATACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: LGCVLNTHANFLHTEGFLGMITD*GSIQQH
Trigger: ATGCTGTTGTATGGATCCCAAATCTGTAATCATTCC...TAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACACAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CTTCGATTCACTCTTATAGATTCACTTGCAGCTTTGTCTTTGACAGTAGAAGAGGTTGATATGAACATCTaGGTTAACAGTCTTCCGTCT +
Preference number: 5 (lower is better)
Translates to: LRFTLIDSLAALSLTVEEVDMNI*VNSLPS
Trigger: AGACGGAAGACTGTTAACCAAGATGTTCATATCAAC...CTCTTCTACTGTCAAAGACAAAGCTGCAAGTGAATCTATAAGAGTGAATCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCAATTCCATCTTCTGTaGACTAGTTCTGGCACCATG +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFQFHLL*TSSGTM
Trigger: CATGGTGCCAGAACTAGTCAACAGAAGATGGAATTG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATGGATCATCAACGCTTaGGATCCCAGTGAAATTATA +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGWIINA*DPSEII
Trigger: TATAATTTCACTGGGATCCAAAGCGTTGATGATCCA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGACCCAACAATGCATTTTaGTTTGATCAACACCTGATG +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGPNNAF*FDQHLM
Trigger: CATCAGGTGTTGATCAAACAAAAATGCATTGTTGGG...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATGCAACAGCCATATTTaGTGTCCTCTTGTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGCNSHI*CPLVFA
Trigger: AGCAAAAACAAGAGGACACAAAATATGGCTGTTGCA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAATGCTTTTCCGCTTTaGAACTACTGCATGATGGGG +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFNAFPL*NYCMMG
Trigger: CCCCATCATGCAGTAGTTCAAAAGCGGAAAAGCATT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAGCATTATCTCTCAATaGCCACCAACGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFSIISQ*PPTLVN
Trigger: GTTCACAAGCGTTGGTGGCAATTGAGAGATAATGCT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTAGAAGCCTTCCCCTTTaGCTTATACCCAAACACCAA +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFRSLPL*LIPKHQ
Trigger: TTGGTGTTTGGGTATAAGCAAAAGGGGAAGGCTTCT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp AACAGAACTTTCCTCTTAGGATCATGTGACTCTTCAGAATTTTGTGCAGATGAACTCACACCTTGTTCCTaGCTATATGTCATCAGAAGA +
Preference number: 5 (lower is better)
Translates to: NRTFLLGSCDSSEFCADELTPCS*LYVIRR
Trigger: TCTTCTGATGACATATAGCAAGGAACAAGGTGTGAG...TTCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS CCA 90 bp GCATCAAATAAAGGCTTTGCTAGTTGTGTTTCAATCACCTTTGACTaGGAAAGATGGTCCCTCATTTCAAATAATATACTTTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: ASNKGFASCVSITFD*ERWSLISNNILSTD
Trigger: GTCTGTGGAAAGTATATTATTTGAAATGAGGGACCATCTTTCCCAGTCAAAGGTGATTGAAACACAACTAGCAAAGCCTTTATTTGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACCTTTTTCATCTGAATaGGCTTCTGAATCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAPFSSE*ASESEV
Trigger: CACCTCAGATTCAGAAGCCAATTCAGATGAAAAAGG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTATGCTGAATGAATTCTaGAACCAAATCCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSMLNEF*NQIHGL
Trigger: CAAGCCATGGATTTGGTTCAAGAATTCATTCAGCAT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTACTCTCTGGCATGCTaGAAAATCAGAATCATCCTG +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFYSLAC*KIRIIL
Trigger: CAGGATGATTCTGATTTTCAAGCATGCCAGAGAGTA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTGGGTCTTTGAGAGAGTaGGGTTTTCATTTGACCTTT +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFGSLRE*GFHLTF
Trigger: AAAGGTCAAATGAAAACCCAACTCTCTCAAAGACCC...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTCAGTTCGGTTGTAATTaGGCTCATAACCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSQFGCN*AHNQEN
Trigger: ATTCTCTTGGTTATGAGCCAAATTACAACCGAACTG...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCATGAAGCTCATCATTaGCCACTGAACGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFHEAHH*PLNAFS
Trigger: TGAAAATGCGTTCAGTGGCAAATGATGAGCTTCATG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGAAAATACAAAACTAACTaGGCTCCATGTTGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGKYKTN*APCCRD
Trigger: ATCCCTACAACATGGAGCCAAGTTAGTTTTGTATTT...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp CCTCCTAAAACTGGTGAAGTCAACAAATCTAGTTTGGAGTTAAAGTGCTTTGGATTCAGTCAATTCACCTaGGTGATTATGTATCAACTC +
Preference number: 5 (lower is better)
Translates to: PPKTGEVNKSSLELKCFGFSQFT*VIMYQL
Trigger: GAGTTGATACATAATCACCAAGGTGAATTGACTGAA...TCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTTTTAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTACATCATCACGAACCTaGGTGTTATCAAATGCCAAC +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFTSSRT*VLSNAN
Trigger: GTTGGCATTTGATAACACCAAGGTTCGTGATGATGT...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCACATGCTTCTCACACCTaGTTCCTTGCTATATGTCAT +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAHASHT*FLAICH
Trigger: ATGACATATAGCAAGGAACAAGGTGTGAGAAGCATG...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTTCTCTCGAATCTATCTaGACAGCAGAGACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFSLESI*TAETLE
Trigger: TTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGA...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATGGATCATCAACGCTTaGGATCCCAGTGAAATTATA +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAWIINA*DPSEII
Trigger: TATAATTTCACTGGGATCCAAAGCGTTGATGATCCA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GTGCAGATGAATAGACTTTATCATTATTTGGATGGTTTGTCCAGTCATCCATTTCAGTTCGGTTGTAATTaGGCTCATAACCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: VQMNRLYHYLDGLSSHPFQFGCN*AHNQEN
Trigger: ATTCTCTTGGTTATGAGCCAAATTACAACCGAACTG...AAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTATATCAACAGATCATaGAGGTCAAGTGTCTCACTA +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSYINRS*RSSVSL
Trigger: TAGTGAGACACTTGACCTCAATGATCTGTTGATATA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTTATTCCATAAAATATTaGGTACAGAGGCACCTACTG +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSYSIKY*VQRHLL
Trigger: CAGTAGGTGCCTCTGTACCAAATATTTTATGGAATA...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp GGAAGAAAATTCTTCCTGCAGATTAGATCAAATGCCTTATTTAGGCTGTGTTCTACTGAAGGCTTTCTATaGCAAATTGGTACAGATTCA +
Preference number: 5 (lower is better)
Translates to: GRKFFLQIRSNALFRLCSTEGFL*QIGTDS
Trigger: TGAATCTGTACCAATTTGCAATAGAAAGCCTTCAGT...AGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATTATGCAAGAGTATGTaGTCATATAGAGAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISALCKSM*SYREVS
Trigger: AGAGACCTCTCTATATGACAACATACTCTTGCATAA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATATATCAACAGATCATaGAGGTCAAGTGTCTCACTA +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISAYINRS*RSSVSL
Trigger: TAGTGAGACACTTGACCTCAATGATCTGTTGATATA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS-3UTR CAA 90 bp TTTGTTAACAAAGCAAATCACTTCAACGTGAATAGGAGTAATCTCATCTCTGCATTATGGTATGTAAGTTaGCTGTGGAATACACGAGAT +
Preference number: 5 (lower is better)
Translates to: FVNKANHFNVNRSNLISALWYVS*LWNTRD
Trigger: ATCTCGTGTATTCCACAGCAAACTTACATACCATAA...TGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389793.7
CDS GCA 72 bp ATTCTTAGAACAAAGCTTCACCTGGTTTGTGGCAGCTaGGGCCGCCGCGCACTCCCCCTCTCCCGGAGAACC +
Preference number: 6 (lower is better)
Translates to: ILRTKLHLVCGS*GRRALPLSRRT
Trigger: GGTTCTCCGGGAGAGGGGGAGTGCGCGGCGGCCGCAGCTGCCACAAACCAGGTGAAGCTTTGTTCTAAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389793.7
ENST00000389794.7
CDS CAA 90 bp TCCTCCCTGGCCTCCACCCTCTGGACCACTGCATTGCAAAGCCGGTaGACATCGGTCAGAAATTCACGTGCCAGTGAGTTACTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: SSLASTLWTTALQSR*TSVRNSRASELLSV
Trigger: CACCGACAGTAACTCACTGGCACGTGAATTTCTGACCGATGTCAACCGGCTTTGCAATGCAGTGGTCCAGAGGGTGGAGGCCAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS GCA 72 bp ACACTGAAACCTTCTGATAGGTGTGGCCAGCAGTTTTaGCCCAGCAACGGCAGGTGGACTGGGGCTATGTGC +
Preference number: 6 (lower is better)
Translates to: TLKPSDRCGQQF*PSNGRWTGAMC
Trigger: GCACATAGCCCCAGTCCACCTGCCGTTGCTGGGGCAAAACTGCTGGCCACACCTATCAGAAGGTTTCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp TCGGTCCAACCTGCAGAAACTACTCGACTCTCCAAGTaGTCGCTCAGACTGCAGCAGTCCCCAAAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SVQPAETTRLSK*SLRLQQSPKPA
Trigger: AGCAGGCTTTGGGGACTGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGTAGTTTCTGCAGGTTGGACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp GCCTCCACCCTCTGGACCACTGCATTGCAAAGCCGGTaGACATCGGTCAGAAATTCACGTGCCAGTGAGTTA +
Preference number: 6 (lower is better)
Translates to: ASTLWTTALQSR*TSVRNSRASEL
Trigger: TAACTCACTGGCACGTGAATTTCTGACCGATGTCAACCGGCTTTGCAATGCAGTGGTCCAGAGGGTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS CAA 90 bp ACCGGTTCTTCGGTCCAACCTGCAGAAACTACTCGACTCTCCAAGTaGTCGCTCAGACTGCAGCAGTCCCCAAAGCCTGCTAGGAATTCA +
Preference number: 6 (lower is better)
Translates to: TGSSVQPAETTRLSK*SLRLQQSPKPARNS
Trigger: TGAATTCCTAGCAGGCTTTGGGGACTGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGTAGTTTCTGCAGGTTGGACCGAAGAACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 72 bp AAGCCGGTTGACATCGGTCAGAAATTCACGTGCCAGTaGGTTACTGTCGGTGCTCATGACCGAGCAGTCTTT +
Preference number: 6 (lower is better)
Translates to: KPVDIGQKFTCQ*VTVGAHDRAVF
Trigger: AAAGACTGCTCGGTCATGAGCACCGACAGTAACTCACTGGCACGTGAATTTCTGACCGATGTCAACCGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS GCA 72 bp ACAGCCCAAACCCCATTAGATGGCAAGGGAAAATACTaGTGTACTCTGATGTCACCCGAGGAAGACACGGGA +
Preference number: 6 (lower is better)
Translates to: TAQTPLDGKGKY*CTLMSPEEDTG
Trigger: TCCCGTGTCTTCCTCGGGTGACATCAGAGTACAGCAGTATTTTCCCTTGCCATCTAATGGGGTTTGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465349.5
ENST00000468107.5
ENST00000489585.5
CDS GCA 72 bp CAGAAACTACTCGACTCTCCAAGTTGTCGCTCAGACTaGAGCAGTCCCCAAAGCCTGCTAGGAATTCAGTTA +
Preference number: 6 (lower is better)
Translates to: QKLLDSPSCRSD*SSPQSLLGIQL
Trigger: TAACTGAATTCCTAGCAGGCTTTGGGGACTGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGTAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp TGTTATGAACACCCGATAGGATCTGGACACAAGTGCTaGTCAAGGAAGCCTGCTGTAGTAAGCGCAAGCACT +
Preference number: 6 (lower is better)
Translates to: CYEHPIGSGHKC*SRKPAVVSAST
Trigger: AGTGCTTGCGCTTACTACAGCAGGCTTCCTTGAGCAGCACTTGTGTCCAGATCCTATCGGGTGTTCATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp CAATGTTATGAACACCCGATAGGATCTGGACACAAGTaGTGCTCAAGGAAGCCTGCTGTAGTAAGCGCAAGC +
Preference number: 6 (lower is better)
Translates to: QCYEHPIGSGHK*CSRKPAVVSAS
Trigger: GCTTGCGCTTACTACAGCAGGCTTCCTTGAGCAGCACTTGTGTCCAGATCCTATCGGGTGTTCATAACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 72 bp GACAGAAGATGCAACACTGTTCGAAAGAGCATCCTTTaGATCAAAGCCACCGGTTCTTCGGTCCAACCTGCA +
Preference number: 6 (lower is better)
Translates to: DRRCNTVRKSIL*IKATGSSVQPA
Trigger: TGCAGGTTGGACCGAAGAACCGGTGGCTTTGATTCAAAGGATGCTCTTTCGAACAGTGTTGCATCTTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp GTAGTAAGCGCAAGCACTGATGGGCACACACTGCAATaGAACAGCACCGCTCAGGATAATAAACATCTCCAT +
Preference number: 6 (lower is better)
Translates to: VVSASTDGHTLQ*NSTAQDNKHLH
Trigger: ATGGAGATGTTTATTATCCTGAGCGGTGCTGTTGCATTGCAGTGTGTGCCCATCAGTGCTTGCGCTTACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp ATCCAACGACACATAGACCAAATGTCTGCTGCTTGGTaGATATGTTCAGGAGAAGGCAAGACAAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: IQRHIDQMSAAW*ICSGEGKTRLS
Trigger: CGAGAGCCTTGTCTTGCCTTCTCCTGAACATATGCACCAAGCAGCAGACATTTGGTCTATGTGTCGTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp GCCGATGGGGAAAACTCTCTCTATCAGCCTCTTTCTTaGTCCGTGAAACTCGTGCTCTTCTCAATAAACCCA +
Preference number: 6 (lower is better)
Translates to: ADGENSLYQPLS*SVKLVLFSINP
Trigger: TGGGTTTATTGAGAAGAGCACGAGTTTCACGGAGCAAGAAAGAGGCTGATAGAGAGAGTTTTCCCCATCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp AAGACACGGGAACAGATGGTGAAGGCAAAAGCTTCATaGACCACAGAAACCTCGGAATACAACTTTCCCACG +
Preference number: 6 (lower is better)
Translates to: KTREQMVKAKAS*TTETSEYNFPT
Trigger: CGTGGGAAAGTTGTATTCCGAGGTTTCTGTGGTGCATGAAGCTTTTGCCTTCACCATCTGTTCCCGTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465349.5
ENST00000468107.5
ENST00000489585.5
CDS CCA 72 bp CACACGGTTGAGTCAAACAGCCCAAACCCCATTAGATaGCAAGGGAAAATACTGCTGTACTCTGATGTCACC +
Preference number: 6 (lower is better)
Translates to: HTVESNSPNPIR*QGKILLYSDVT
Trigger: GGTGACATCAGAGTACAGCAGTATTTTCCCTTGCCATCTAATGGGGTTTGGGCTGTTTGACTCAACCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465349.5
ENST00000468107.5
ENST00000489585.5
CDS CAA 72 bp AGCCGATGGGGAAAACTCTCTCTATCAGCCTCTTTCTaGCTCCGTGAAACTCGTGCTCTTCTCAATAAACCC +
Preference number: 6 (lower is better)
Translates to: SRWGKLSLSASF*LRETRALLNKP
Trigger: GGGTTTATTGAGAAGAGCACGAGTTTCACGGAGCAAGAAAGAGGCTGATAGAGAGAGTTTTCCCCATCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp GATGAAAGCAGCCGATGGGGAAAACTCTCTCTATCAGCCTCTTTCTaGCTCCGTGAAACTCGTGCTCTTCTCAATAAACCCATGGCCTTA +
Preference number: 6 (lower is better)
Translates to: DESSRWGKLSLSASF*LRETRALLNKPMAL
Trigger: TAAGGCCATGGGTTTATTGAGAAGAGCACGAGTTTCACGGAGCAAGAAAGAGGCTGATAGAGAGAGTTTTCCCCATCGGCTGCTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp ACTCAACATGTAGATCCAACGACACATAGACCAAATGTCTGCTGCTaGGTGCATATGTTCAGGAGAAGGCAAGACAAGGCTCTCGAGAGA +
Preference number: 6 (lower is better)
Translates to: TQHVDPTTHRPNVCC*VHMFRRRQDKALER
Trigger: TCTCTCGAGAGCCTTGTCTTGCCTTCTCCTGAACATATGCACCAAGCAGCAGACATTTGGTCTATGTGTCGTTGGATCTACATGTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 72 bp GGGAAGGAAACAGCATTTATCCTGCTTTTCCTTGACTaGCTGTATTTAAAGGTAGCGAAGGTGCTGGAGCCG +
Preference number: 6 (lower is better)
Translates to: GKETAFILLFLD*LYLKVAKVLEP
Trigger: CGGCTCCAGCACCTTCGCTACCTTTAAATACAGTCAGTCAAGGAAAAGCAGGATAAATGCTGTTTCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473037.5
CDS CCA 72 bp AGCAGTCCCCAAAGCCTGCTAGGAATTCAGTTAGTGTaGGCACTACACTGGCTGCTAAAGGAGAATTATGAT +
Preference number: 6 (lower is better)
Translates to: SSPQSLLGIQLV*ALHWLLKENYD
Trigger: ATCATAATTCTCCTTTAGCAGCCAGTGTAGTGCCCACACTAACTGAATTCCTAGCAGGCTTTGGGGACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CCA 72 bp CTGTGCTGTCATAGCCAGAAGTATCTTCTGAGTCATTaGCCGACTCCCTGTCAGACTCTGCTTCTTTACTTA +
Preference number: 6 (lower is better)
Translates to: LCCHSQKYLLSH*PTPCQTLLLYL
Trigger: TAAGTAAAGAAGCAGAGTCTGACAGGGAGTCGGCCAATGACTCAGAAGATACTTCTGGCTATGACAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp GTAGATCCAACGACACATAGACCAAATGTCTGCTGCTaGGTGCATATGTTCAGGAGAAGGCAAGACAAGGCT +
Preference number: 6 (lower is better)
Translates to: VDPTTHRPNVCC*VHMFRRRQDKA
Trigger: AGCCTTGTCTTGCCTTCTCCTGAACATATGCACCAAGCAGCAGACATTTGGTCTATGTGTCGTTGGATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp TGCTGGGCAGGATCCCTTGAAATCTGTAAGAAGGACTGGATAAACTaGAGGAGAGTTCAGCATCACATAAGTTTCCCTGCAGTGTCTCTT +
Preference number: 6 (lower is better)
Translates to: CWAGSLEICKKDWIN*RRVQHHISFPAVSL
Trigger: AAGAGACACTGCAGGGAAACTTATGTGATGCTGAACTCTCCTCAAGTTTATCCAGTCCTTCTTACAGATTTCAAGGGATCCTGCCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp AATAATTCCCGAGGGCAACTCGAAGCAGGGCATCAAATAAAGGCTTaGCTAGTTGTGTTTCAATCACCTTTGACTGGGAAAGATGGTCCC +
Preference number: 6 (lower is better)
Translates to: NNSRGQLEAGHQIKA*LVVFQSPLTGKDGP
Trigger: GGGACCATCTTTCCCAGTCAAAGGTGATTGAAACACAACTAGCAAAGCCTTTATTTGATGCCCTGCTTCGAGTTGCCCTCGGGAATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp ACTGTCGGTGCTCATGACCGAGCAGTCTTTCACCACTaGTGTGACATTTACAGTCTATATCATTTGGACTCA +
Preference number: 6 (lower is better)
Translates to: TVGAHDRAVFHH*CDIYSLYHLDS
Trigger: TGAGTCCAAATGATATAGACTGTAAATGTCACAGCAGTGGTGAAAGACTGCTCGGTCATGAGCACCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS CCA 72 bp GAATTTAGCTTGGTAAGTAATAGAAATCCTCGACCATaGACAAGGTACTGTCCAAGGGTTGCCATGTGCGTC +
Preference number: 6 (lower is better)
Translates to: EFSLVSNRNPRP*TRYCPRVAMCV
Trigger: GACGCACATGGCAACCCTTGGACAGTACCTTGTCCATGGTCGAGGATTTCTATTACTTACCAAGCTAAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000468107.5
ENST00000468626.2
ENST00000489585.5
CDS CCA 72 bp GAGTCTTTCACCAGGATTTATGTACTCTGCACCTTCTaGTCTGTCGCTCTTGTACAAGGAGATTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: ESFTRIYVLCTF*SVALVQGDFSR
Trigger: TCTGGAGAAATCTCCTTGTACAAGAGCGACAGACCAGAAGGTGCAGAGTACATAAATCCTGGTGAAAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389794.7
CDS CAA 72 bp CGAGGGCAACTCGAAGCAGGGCATCAAATAAAGGCTTaGCTAGTTGTGTTTCAATCACCTTTGACTGGGAAA +
Preference number: 6 (lower is better)
Translates to: RGQLEAGHQIKA*LVVFQSPLTGK
Trigger: TTTCCCAGTCAAAGGTGATTGAAACACAACTAGCAAAGCCTTTATTTGATGCCCTGCTTCGAGTTGCCCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp TCTCTGGAATTTTCCAAAGCCATAGCATCTGGAGGAGTCTGTTCTTaGGTTGCTAAGCGGTCAAGTTTAGCTTTGGGGTGGTCTTGTTTA +
Preference number: 6 (lower is better)
Translates to: SLEFSKAIASGGVCS*VAKRSSLALGWSCL
Trigger: TAAACAAGACCACCCCAAAGCTAAACTTGACCGCTTAGCAACCAAAGAACAGACTCCTCCAGATGCTATGGCTTTGGAAAATTCCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 72 bp CTTCTCAGTCATAGCATCATTATGTTCAAAATCTGCTaGATAATTCCCGAGGGCAACTCGAAGCAGGGCATC +
Preference number: 6 (lower is better)
Translates to: LLSHSIIMFKIC*IIPEGNSKQGI
Trigger: GATGCCCTGCTTCGAGTTGCCCTCGGGAATTATTCAGCAGATTTTGAACATAATGATGCTATGACTGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp GCAGCAGATGGGGCCTTCTATGCTTATTCATTGCTATaGCTTTTTCATCTGAATTGGCTTCTGAATCTGAGG +
Preference number: 6 (lower is better)
Translates to: AADGAFYAYSLL*LFHLNWLLNLR
Trigger: CCTCAGATTCAGAAGCCAATTCAGATGAAAAAGGCATAGCAATGAATAAGCATAGAAGGCCCCATCTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp TGGGGCCTTCTATGCTTATTCATTGCTATGCCTTTTTCATCTGAATaGGCTTCTGAATCTGAGGTGGAGAGCTGTGTCTTTCTTGCATCT +
Preference number: 6 (lower is better)
Translates to: WGLLCLFIAMPFSSE*ASESEVESCVFLAS
Trigger: AGATGCAAGAAAGACACAGCTCTCCACCTCAGATTCAGAAGCCAATTCAGATGAAAAAGGCATAGCAATGAATAAGCATAGAAGGCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp ATCCCATCAATATCTGGAACTGAGGCATCTTTCTGTTaGTCCCCTAGGCTGATTATCAGAGTTTCAAATGCT +
Preference number: 6 (lower is better)
Translates to: IPSISGTEASFC*SPRLIIRVSNA
Trigger: AGCATTTGAAACTCTGATAATCAGCCTAGGGGAGCAACAGAAAGATGCCTCAGTTCCAGATATTGATGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp TTTTGTGATGAAACACCGTTGCTTAAATTTGGAGCGTaGAGTAAAGGGAAGGTTAGATACTGTGAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: FCDETPLLKFGA*SKGKVRYCEGL
Trigger: GAGCCCTTCACAGTATCTAACCTTCCCTTTACTGCACGCTCCAAATTTAAGCAACGGTGTTTCATCACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp GGATCCCTTGAAATCTGTAAGAAGGACTGGATAAACTaGAGGAGAGTTCAGCATCACATAAGTTTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: GSLEICKKDWIN*RRVQHHISFPA
Trigger: TGCAGGGAAACTTATGTGATGCTGAACTCTCCTCAAGTTTATCCAGTCCTTCTTACAGATTTCAAGGGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 72 bp ATTTTCTGGCATCATCTCTGCAGTACTAACATCTACTaGCAGAAGATGCAACACTGTTCGAAAGAGCATCCT +
Preference number: 6 (lower is better)
Translates to: IFWHHLCSTNIY*QKMQHCSKEHP
Trigger: AGGATGCTCTTTCGAACAGTGTTGCATCTTCTGTCAGTAGATGTTAGTACTGCAGAGATGATGCCAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp CAGGATACTTTTGTGATGAAACACCGTTGCTTAAATTaGGAGCGTGCAGTAAAGGGAAGGTTAGATACTGTG +
Preference number: 6 (lower is better)
Translates to: QDTFVMKHRCLN*ERAVKGRLDTV
Trigger: CACAGTATCTAACCTTCCCTTTACTGCACGCTCCAAATTTAAGCAACGGTGTTTCATCACAAAAGTATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp TTAAAATCCCAGGATACTTTTGTGATGAAACACCGTTGCTTAAATTaGGAGCGTGCAGTAAAGGGAAGGTTAGATACTGTGAAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: LKSQDTFVMKHRCLN*ERAVKGRLDTVKGS
Trigger: TGAGCCCTTCACAGTATCTAACCTTCCCTTTACTGCACGCTCCAAATTTAAGCAACGGTGTTTCATCACAAAAGTATCCTGGGATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp GCCTTACTGTTTAAAATCCCAGGATACTTTTGTGATGAAACACCGTaGCTTAAATTTGGAGCGTGCAGTAAAGGGAAGGTTAGATACTGT +
Preference number: 6 (lower is better)
Translates to: ALLFKIPGYFCDETP*LKFGACSKGKVRYC
Trigger: ACAGTATCTAACCTTCCCTTTACTGCACGCTCCAAATTTAAGCAACGGTGTTTCATCACAAAAGTATCCTGGGATTTTAAACAGTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389793.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp TTCACAGTGTTACTTAAGATAATGACAATTGGCCTTTaGAGCACAGACCTAAACCAAACGTTCATTCACGGT +
Preference number: 6 (lower is better)
Translates to: FTVLLKIMTIGL*STDLNQTFIHG
Trigger: ACCGTGAATGAACGTTTGGTTTAGGTCTGTGCTGCAAAGGCCAATTGTCATTATCTTAAGTAACACTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473037.5
CDS CCA 72 bp TATGCTTATTCATTGCTATGCCTTTTTCATCTGAATTaGCTTCTGAATCTGAGGTGGAGAGCTGTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: YAYSLLCLFHLN*LLNLRWRAVSF
Trigger: GAAAGACACAGCTCTCCACCTCAGATTCAGAAGCCAATTCAGATGAAAAAGGCATAGCAATGAATAAGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp CTATGCTTATTCATTGCTATGCCTTTTTCATCTGAATaGGCTTCTGAATCTGAGGTGGAGAGCTGTGTCTTT +
Preference number: 6 (lower is better)
Translates to: LCLFIAMPFSSE*ASESEVESCVF
Trigger: AAAGACACAGCTCTCCACCTCAGATTCAGAAGCCAATTCAGATGAAAAAGGCATAGCAATGAATAAGCATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp GCAGGGCATCAAATAAAGGCTTTGCTAGTTGTGTTTCAATCACCTTaGACTGGGAAAGATGGTCCCTCATTTCAAATAATATACTTTCCA +
Preference number: 6 (lower is better)
Translates to: AGHQIKALLVVFQSP*TGKDGPSFQIIYFP
Trigger: TGGAAAGTATATTATTTGAAATGAGGGACCATCTTTCCCAGTCAAAGGTGATTGAAACACAACTAGCAAAGCCTTTATTTGATGCCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 90 bp CCAGAAATATTCTCAAAAGAAGGGTTAGCTCTTCTGAACATGTTCTaGAACTCATCAAAGATACCAAAAGATCCACCAATACTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: PEIFSKEGLALLNMF*NSSKIPKDPPILSG
Trigger: GCCAGAGAGTATTGGTGGATCTTTTGGTATCTTTGATGAGTTCAAGAACATGTTCAGAAGAGCTAACCCTTCTTTTGAGAATATTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS TCA 72 bp GCATACAAATCTCAGGATAAATTATTTCCCCTTGAGTaGGGTTTTCGAGTAAGTCATTTGGACTGCTTGATG +
Preference number: 6 (lower is better)
Translates to: AYKSQDKLFPLE*GFRVSHLDCLM
Trigger: CATCAAGCAGTCCAAATGACTTACTCGAAAACCTCACTCAAGGGGAAATAATTTATCCTGAGATTTGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS GCA 72 bp GTGAAGAAAGTAAGGTGCAGAAGAGTGTGTATACTTTaGTATCTTTCTTTGTGTTATGAAGTAGGGGACAGA +
Preference number: 6 (lower is better)
Translates to: VKKVRCRRVCIL*YLSLCYEVGDR
Trigger: TCTGTCCCCTACTTCATAACACAAAGAAAGATAGCAAAGTATACACACTCTTCTGCACCTTACTTTCTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473037.5
CDS CCA 72 bp GCTAGTTGTGTTTCAATCACCTTTGACTGGGAAAGATaGTCCCTCATTTCAAATAATATACTTTCCACAGAC +
Preference number: 6 (lower is better)
Translates to: ASCVSITFDWER*SLISNNILSTD
Trigger: GTCTGTGGAAAGTATATTATTTGAAATGAGGGACCATCTTTCCCAGTCAAAGGTGATTGAAACACAACTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CCA 72 bp GATATGATTATCTTGAAAAGAAGAGGGTCAGCAGGCTaGAGAGTTAATCAGAATCAAGTTGTAATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: DMIILKRRGSAG*RVNQNQVVMAK
Trigger: CTTTGCCATTACAACTTGATTCTGATTAACTCTCCAGCCTGCTGACCCTCTTCTTTTCAAGATAATCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473037.5
CDS CCA 72 bp AAAGGCTTTGCTAGTTGTGTTTCAATCACCTTTGACTaGGAAAGATGGTCCCTCATTTCAAATAATATACTT +
Preference number: 6 (lower is better)
Translates to: KGFASCVSITFD*ERWSLISNNIL
Trigger: AAGTATATTATTTGAAATGAGGGACCATCTTTCCCAGTCAAAGGTGATTGAAACACAACTAGCAAAGCCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp CAAATAAAGGCTTTGCTAGTTGTGTTTCAATCACCTTaGACTGGGAAAGATGGTCCCTCATTTCAAATAATA +
Preference number: 6 (lower is better)
Translates to: QIKALLVVFQSP*TGKDGPSFQII
Trigger: TATTATTTGAAATGAGGGACCATCTTTCCCAGTCAAAGGTGATTGAAACACAACTAGCAAAGCCTTTATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5
CDS CAA 72 bp TTCTCAAAAGAAGGGTTAGCTCTTCTGAACATGTTCTaGAACTCATCAAAGATACCAAAAGATCCACCAATA +
Preference number: 6 (lower is better)
Translates to: FSKEGLALLNMF*NSSKIPKDPPI
Trigger: TATTGGTGGATCTTTTGGTATCTTTGATGAGTTCAAGAACATGTTCAGAAGAGCTAACCCTTCTTTTGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389793.7
ENST00000389794.7
ENST00000465349.5
ENST00000489585.5