Pregenerated sensors for LYPD4 (Homo sapiens)
Ensembl gene IDs: ENSG00000273111Ensembl transcript IDs: ENST00000343055.5, ENST00000601246.5, ENST00000609812.6
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTTGTTGCAGAGATAAGACCGGCAGACGCGACTGTAGGAGGCAATaGACACTCCGGGTGGGGAAACAAGGTAGGAGATTTGCGCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: GCCRDKTGRRDCRRQ*TLRVGKQGRRFAQG Trigger: ACCCTGCGCAAATCTCCTACCTTGTTTCCCCACCCGGAGTGTCCATTGCCTCCTACAGTCGCGTCTGCCGGTCTTATCTCTGCAACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS GCA 90 bp | GCAGTCCAGCTAGAGGTCACGTCGGCCACCCTTTTCTGCCTGCAATaGCTCAGACACACATGCTCTGTAACCCAGAAATCTGTGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: AVQLEVTSATLFCLQ*LRHTCSVTQKSVAK Trigger: CTTGGCCACAGATTTCTGGGTTACAGAGCATGTGTGTCTGAGGCATTGCAGGCAGAAAAGGGTGGCCGACGTGACCTCTAGCTGGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 90 bp | CACAAGTCTCAAATGCTGGGGTCCCATGGCCCTGTGTCTGGGTCCTaGGTGCTAGAGGTCAGTCTGGAATCAGTTTCAGTCTGGATCCCA | + |
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Preference number: 5 (lower is better) Translates to: HKSQMLGSHGPVSGS*VLEVSLESVSVWIP Trigger: TGGGATCCAGACTGAAACTGATTCCAGACTGACCTCTAGCACCCAGGACCCAGACACAGGGCCATGGGACCCCAGCATTTGAGACTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 90 bp | ATAAGACCGGCAGACGCGACTGTAGGAGGCAATGGACACTCCGGGTaGGGAAACAAGGTAGGAGATTTGCGCAGGGTAAGACGAAGACGA | + |
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Preference number: 5 (lower is better) Translates to: IRPADATVGGNGHSG*GNKVGDLRRVRRRR Trigger: TCGTCTTCGTCTTACCCTGCGCAAATCTCCTACCTTGTTTCCCCACCCGGAGTGTCCATTGCCTCCTACAGTCGCGTCTGCCGGTCTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 90 bp | CAGCGCTGGGAGAGAACGCATAAAAGAAGGGTAGCTCAGGAGTTGTaGGGCACCGGAAGAGACATAACAGAAAACGCAGGCCTCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: QRWERTHKRRVAQEL*GTGRDITENAGLHS Trigger: TGAGTGGAGGCCTGCGTTTTCTGTTATGTCTCTTCCGGTGCCCCACAACTCCTGAGCTACCCTTCTTTTATGCGTTCTCTCCCAGCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CCA 90 bp | CTGGCTGTACAGAGAAAAGGGGCCAAGGCAGAGAAGATGGCGGGATaGTGTGAGACGGAGTTCACAGAAATACCCAGAGAAGGCGACGAT | + |
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Preference number: 5 (lower is better) Translates to: LAVQRKGAKAEKMAG*CETEFTEIPREGDD Trigger: ATCGTCGCCTTCTCTGGGTATTTCTGTGAACTCCGTCTCACACCATCCCGCCATCTTCTCTGCCTTGGCCCCTTTTCTCTGTACAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CCA 90 bp | ACACGTAGAAGCAGCCAAGGGGCAAGAATTAGTGGTGACAAAATTTaGGAGGCAATCCTTCATGTGCTCGCCCACACAGGTCGGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TRRSSQGARISGDKI*EAILHVLAHTGRAA Trigger: AGCTGCCCGACCTGTGTGGGCGAGCACATGAAGGATTGCCTCCCAAATTTTGTCACCACTAATTCTTGCCCCTTGGCTGCTTCTACGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS TCA 90 bp | TGTACAGAGAAAAGGGGCCAAGGCAGAGAAGATGGCGGGATGGTGTaGGACGGAGTTCACAGAAATACCCAGAGAAGGCGACGATTACAC | + |
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Preference number: 5 (lower is better) Translates to: CTEKRGQGREDGGMV*DGVHRNTQRRRRLH Trigger: GTGTAATCGTCGCCTTCTCTGGGTATTTCTGTGAACTCCGTCTCACACCATCCCGCCATCTTCTCTGCCTTGGCCCCTTTTCTCTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 90 bp | GGGCAAGAATTAGTGGTGACAAAATTTGGGAGGCAATCCTTCATGTaGTCGCCCACACAGGTCGGGCAGCTACAGGACGCAGATGTGATA | + |
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Preference number: 5 (lower is better) Translates to: GQELVVTKFGRQSFM*SPTQVGQLQDADVI Trigger: TATCACATCTGCGTCCTGTAGCTGCCCGACCTGTGTGGGCGAGCACATGAAGGATTGCCTCCCAAATTTTGTCACCACTAATTCTTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS GCA 90 bp | GGGAGATTAGGCCAATCAGAGAAGACAGCACACGCCAGCCTCAGATaGAGAACAACTGGACCTGGACCTAACAAGCTGAGTACAAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: GRLGQSEKTAHASLR*RTTGPGPNKLSTSG Trigger: TCCACTTGTACTCAGCTTGTTAGGTCCAGGTCCAGTTGTTCTGCATCTGAGGCTGGCGTGTGCTGTCTTCTCTGATTGGCCTAATCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 90 bp | GCAGTCCCTGTCTCAATGAACACTAGCGTCTCCTCGCAGCCCTCTTaGAGCTTACACACCATGTTCCTCATCAGAAGCCACTTCCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: AVPVSMNTSVSSQPS*SLHTMFLIRSHFQL Trigger: TAACTGGAAGTGGCTTCTGATGAGGAACATGGTGTGTAAGCTGCAAGAGGGCTGCGAGGAGACGCTAGTGTTCATTGAGACAGGGACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CCA 90 bp | TCTGGGTCCTGGGTGCTAGAGGTCAGTCTGGAATCAGTTTCAGTCTaGATCCCAAGCTCAGTTCCCATCAGTCCCCGAATTCTTTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SGSWVLEVSLESVSV*IPSSVPISPRILCP Trigger: TGGACAAAGAATTCGGGGACTGATGGGAACTGAGCTTGGGATCCAGACTGAAACTGATTCCAGACTGACCTCTAGCACCCAGGACCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS TCA 90 bp | ACACCCCAAGCAGGATCTTGCCTGGAGGATGCTGCACCAACAATCTaGGACTTCTCTAAGATGTTGAGGACCTCAGTCACTTTGATGCTC | + |
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Preference number: 5 (lower is better) Translates to: TPQAGSCLEDAAPTI*DFSKMLRTSVTLML Trigger: GAGCATCAAAGTGACTGAGGTCCTCAACATCTTAGAGAAGTCTCAGATTGTTGGTGCAGCATCCTCCAGGCAAGATCCTGCTTGGGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS TCA 90 bp | CATCAGAAGCCACTTCCAGTTATGGAAAGCAACAGCTCTGAATCTTaGGGCTGTTGCTTCATAGCACAAAAGAGCTCCAGCCCGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HQKPLPVMESNSSES*GCCFIAQKSSSPRQ Trigger: CTGCCTCGGGCTGGAGCTCTTTTGTGCTATGAAGCAACAGCCTCAAGATTCAGAGCTGTTGCTTTCCATAACTGGAAGTGGCTTCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 90 bp | GATGCCACCCCTACAAAAGACAAACAAATTGATGGAATGGAACCTTaGAGGGAGAGAGAGGACCAGCAGAGAGAGGGAGGCGTAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: DATPTKDKQIDGMEP*REREDQQREGGVGK Trigger: TTTTCCTACGCCTCCCTCTCTCTGCTGGTCCTCTCTCTCCCTGCAAGGTTCCATTCCATCAATTTGTTTGTCTTTTGTAGGGGTGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS TCA 90 bp | ACGCCAGCCTCAGATGCAGAACAACTGGACCTGGACCTAACAAGCTaGGTACAAGTGGAGACGCAACCAGAAAAGATTGAAGTGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: TPASDAEQLDLDLTS*VQVETQPEKIEVKS Trigger: GGATTTCACTTCAATCTTTTCTGGTTGCGTCTCCACTTGTACTCAGCTTGTTAGGTCCAGGTCCAGTTGTTCTGCATCTGAGGCTGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS TCA 90 bp | TGTTCCTCATCAGAAGCCACTTCCAGTTATGGAAAGCAACAGCTCTaGATCTTGAGGCTGTTGCTTCATAGCACAAAAGAGCTCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: CSSSEATSSYGKQQL*ILRLLLHSTKELQP Trigger: GGGCTGGAGCTCTTTTGTGCTATGAAGCAACAGCCTCAAGATTCAGAGCTGTTGCTTTCCATAACTGGAAGTGGCTTCTGATGAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 72 bp | GCCCCTAGAAGGCAGAACAGCTGCACAAGTCTCAAATaGTGGGGTCCCATGGCCCTGTGTCTGGGTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: APRRQNSCTSLK*WGPMALCLGPG Trigger: CCCAGGACCCAGACACAGGGCCATGGGACCCCAGCATTTGAGACTTGTGCAGCTGTTCTGCCTTCTAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CAA 72 bp | ACGATTACACAGAGGAGCCCCCAGAGGGGCGAACTCTaGAGGAAGATGAACGCGGAGGGTGGAGCCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TITQRSPQRGEL*RKMNAEGGASQ Trigger: CTGGCTGGCTCCACCCTCCGCGTTCATCTTCCTCAAGAGTTCGCCCCTCTGGGGGCTCCTCTGTGTAATCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CAA 90 bp | GAGAAGGCGACGATTACACAGAGGAGCCCCCAGAGGGGCGAACTCTaGAGGAAGATGAACGCGGAGGGTGGAGCCAGCCAGAAATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: EKATITQRSPQRGEL*RKMNAEGGASQKFR Trigger: TCTGAATTTCTGGCTGGCTCCACCCTCCGCGTTCATCTTCCTCAAGAGTTCGCCCCTCTGGGGGCTCCTCTGTGTAATCGTCGCCTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CCA 72 bp | GGGCCAGGCTATCAGGGCATGAAGCACGGGAGAAAATaGGTCCGAAGAGGGAGAGCGTCCGAGAGAAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GPGYQGMKHGRK*VRRGRASERKG Trigger: TCCTTTTCTCTCGGACGCTCTCCCTCTTCGGACCCATTTTCTCCCGTGCTTCATGCCCTGATAGCCTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 72 bp | GCAGTCCAGCTAGAGGTCACGTCGGCCACCCTTTTCTaGCTGCAATGCCTCAGACACACATGCTCTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: AVQLEVTSATLF*LQCLRHTCSVT Trigger: GGTTACAGAGCATGTGTGTCTGAGGCATTGCAGGCAGAAAAGGGTGGCCGACGTGACCTCTAGCTGGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS GCA 72 bp | CAAGGTGCTTTCCAATTTTATCTAGGACAGCTCCCCTaGCCAGCAGTCCAGCTAGAGGTCACGTCGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: QGAFQFYLGQLP*PAVQLEVTSAT Trigger: GGTGGCCGACGTGACCTCTAGCTGGACTGCTGGGCAGGGGAGCTGTCCTAGATAAAATTGGAAAGCACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343055.5 ENST00000601246.5 |
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| CDS CCA 72 bp | CAAATGCTGGGGTCCCATGGCCCTGTGTCTGGGTCCTaGGTGCTAGAGGTCAGTCTGGAATCAGTTTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: QMLGSHGPVSGS*VLEVSLESVSV Trigger: GACTGAAACTGATTCCAGACTGACCTCTAGCACCCAGGACCCAGACACAGGGCCATGGGACCCCAGCATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 72 bp | CAAGTCTCAAATGCTGGGGTCCCATGGCCCTGTGTCTaGGTCCTGGGTGCTAGAGGTCAGTCTGGAATCAGT | + |
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Preference number: 6 (lower is better) Translates to: QVSNAGVPWPCV*VLGARGQSGIS Trigger: ACTGATTCCAGACTGACCTCTAGCACCCAGGACCCAGACACAGGGCCATGGGACCCCAGCATTTGAGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 72 bp | GCAGACGCGACTGTAGGAGGCAATGGACACTCCGGGTaGGGAAACAAGGTAGGAGATTTGCGCAGGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: ADATVGGNGHSG*GNKVGDLRRVR Trigger: TCTTACCCTGCGCAAATCTCCTACCTTGTTTCCCCACCCGGAGTGTCCATTGCCTCCTACAGTCGCGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CAA 90 bp | GTAGGAGGCAATGGACACTCCGGGTGGGGAAACAAGGTAGGAGATTaGCGCAGGGTAAGACGAAGACGAGCTGCAGCCTTTAAAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VGGNGHSGWGNKVGD*RRVRRRRAAAFKAH Trigger: GTGGGCTTTAAAGGCTGCAGCTCGTCTTCGTCTTACCCTGCGCAAATCTCCTACCTTGTTTCCCCACCCGGAGTGTCCATTGCCTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS TCA 72 bp | AAAAGGGGCCAAGGCAGAGAAGATGGCGGGATGGTGTaGGACGGAGTTCACAGAAATACCCAGAGAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: KRGQGREDGGMV*DGVHRNTQRRR Trigger: TCGCCTTCTCTGGGTATTTCTGTGAACTCCGTCTCACACCATCCCGCCATCTTCTCTGCCTTGGCCCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 72 bp | TTAGTGGTGACAAAATTTGGGAGGCAATCCTTCATGTaGTCGCCCACACAGGTCGGGCAGCTACAGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: LVVTKFGRQSFM*SPTQVGQLQDA Trigger: TGCGTCCTGTAGCTGCCCGACCTGTGTGGGCGAGCACATGAAGGATTGCCTCCCAAATTTTGTCACCACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS GCA 72 bp | GGCCAATCAGAGAAGACAGCACACGCCAGCCTCAGATaGAGAACAACTGGACCTGGACCTAACAAGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: GQSEKTAHASLR*RTTGPGPNKLS Trigger: ACTCAGCTTGTTAGGTCCAGGTCCAGTTGTTCTGCATCTGAGGCTGGCGTGTGCTGTCTTCTCTGATTGGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 72 bp | ACTGTTTCTTTCCAATTTTATCTAGGACAGCTCCCCTaGCCAGCAGTCCAGCTAGAGGTCACGTCGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: TVSFQFYLGQLP*PAVQLEVTSAT Trigger: GGTGGCCGACGTGACCTCTAGCTGGACTGCTGGGCAGGGGAGCTGTCCTAGATAAAATTGGAAAGAAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS GCA 72 bp | ATGCTCTGTAACCCAGAAATCTGTGGCCAAGAAAGGTaGCAAGACCCGCAGAAAAGCGGGCTTGGTCAACGC | + |
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Preference number: 6 (lower is better) Translates to: MLCNPEICGQER*QDPQKSGLGQR Trigger: GCGTTGACCAAGCCCGCTTTTCTGCGGGTCTTGGCACCTTTCTTGGCCACAGATTTCTGGGTTACAGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601246.5 |
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| CDS CCA 72 bp | AGAGATAAGACCGGCAGACGCGACTGTAGGAGGCAATaGACACTCCGGGTGGGGAAACAAGGTAGGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: RDKTGRRDCRRQ*TLRVGKQGRRF Trigger: AAATCTCCTACCTTGTTTCCCCACCCGGAGTGTCCATTGCCTCCTACAGTCGCGTCTGCCGGTCTTATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 72 bp | GGAGGCCTAAGACGACACCCCAAGCAGGATCTTGCCTaGAGGATGCTGCACCAACAATCTGAGACTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: GGLRRHPKQDLA*RMLHQQSETSL Trigger: TAGAGAAGTCTCAGATTGTTGGTGCAGCATCCTCCAGGCAAGATCCTGCTTGGGGTGTCGTCTTAGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CAA 72 bp | AATGGACACTCCGGGTGGGGAAACAAGGTAGGAGATTaGCGCAGGGTAAGACGAAGACGAGCTGCAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: NGHSGWGNKVGD*RRVRRRRAAAF Trigger: AAAGGCTGCAGCTCGTCTTCGTCTTACCCTGCGCAAATCTCCTACCTTGTTTCCCCACCCGGAGTGTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS GCA 72 bp | GTCTCAATGAACACTAGCGTCTCCTCGCAGCCCTCTTaGAGCTTACACACCATGTTCCTCATCAGAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VSMNTSVSSQPS*SLHTMFLIRSH Trigger: GTGGCTTCTGATGAGGAACATGGTGTGTAAGCTGCAAGAGGGCTGCGAGGAGACGCTAGTGTTCATTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CCA 72 bp | TGGGTGCTAGAGGTCAGTCTGGAATCAGTTTCAGTCTaGATCCCAAGCTCAGTTCCCATCAGTCCCCGAATT | + |
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Preference number: 6 (lower is better) Translates to: WVLEVSLESVSV*IPSSVPISPRI Trigger: AATTCGGGGACTGATGGGAACTGAGCTTGGGATCCAGACTGAAACTGATTCCAGACTGACCTCTAGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 72 bp | AGCAGCCAAGGGGCAAGAATTAGTGGTGACAAAATTTaGGAGGCAATCCTTCATGTGCTCGCCCACACAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSQGARISGDKI*EAILHVLAHTG Trigger: ACCTGTGTGGGCGAGCACATGAAGGATTGCCTCCCAAATTTTGTCACCACTAATTCTTGCCCCTTGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS CCA 72 bp | GAGAGAACGCATAAAAGAAGGGTAGCTCAGGAGTTGTaGGGCACCGGAAGAGACATAACAGAAAACGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ERTHKRRVAQEL*GTGRDITENAG Trigger: GCCTGCGTTTTCTGTTATGTCTCTTCCGGTGCCCCACAACTCCTGAGCTACCCTTCTTTTATGCGTTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CAA 90 bp | GGGCAGCTACAGGACGCAGATGTGATAGACTTAGGAGTGCTGGCCTaGAGTTTCACAAAAGGCTCCAAATTGGTGAGGTTGTTGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GQLQDADVIDLGVLA*SFTKGSKLVRLLQR Trigger: TCTCTGCAACAACCTCACCAATTTGGAGCCTTTTGTGAAACTCAAGGCCAGCACTCCTAAGTCTATCACATCTGCGTCCTGTAGCTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS TCA 72 bp | GCAGGATCTTGCCTGGAGGATGCTGCACCAACAATCTaGGACTTCTCTAAGATGTTGAGGACCTCAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: AGSCLEDAAPTI*DFSKMLRTSVT Trigger: AGTGACTGAGGTCCTCAACATCTTAGAGAAGTCTCAGATTGTTGGTGCAGCATCCTCCAGGCAAGATCCTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS GCA 72 bp | CCTACAAAAGACAAACAAATTGATGGAATGGAACCTTaGAGGGAGAGAGAGGACCAGCAGAGAGAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PTKDKQIDGMEP*REREDQQREGG Trigger: GCCTCCCTCTCTCTGCTGGTCCTCTCTCTCCCTGCAAGGTTCCATTCCATCAATTTGTTTGTCTTTTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS CAA 72 bp | CAGGACGCAGATGTGATAGACTTAGGAGTGCTGGCCTaGAGTTTCACAAAAGGCTCCAAATTGGTGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: QDADVIDLGVLA*SFTKGSKLVRL Trigger: CAACCTCACCAATTTGGAGCCTTTTGTGAAACTCAAGGCCAGCACTCCTAAGTCTATCACATCTGCGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343055.5 ENST00000601246.5 ENST00000609812.6 |
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| CDS TCA 72 bp | CCACTTCCAGTTATGGAAAGCAACAGCTCTGAATCTTaGGGCTGTTGCTTCATAGCACAAAAGAGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLPVMESNSSES*GCCFIAQKSSS Trigger: GCTGGAGCTCTTTTGTGCTATGAAGCAACAGCCTCAAGATTCAGAGCTGTTGCTTTCCATAACTGGAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS TCA 72 bp | TCAGATGCAGAACAACTGGACCTGGACCTAACAAGCTaGGTACAAGTGGAGACGCAACCAGAAAAGATTGAA | + |
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Preference number: 6 (lower is better) Translates to: SDAEQLDLDLTS*VQVETQPEKIE Trigger: TTCAATCTTTTCTGGTTGCGTCTCCACTTGTACTCAGCTTGTTAGGTCCAGGTCCAGTTGTTCTGCATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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| CDS TCA 72 bp | TCAGAAGCCACTTCCAGTTATGGAAAGCAACAGCTCTaGATCTTGAGGCTGTTGCTTCATAGCACAAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SEATSSYGKQQL*ILRLLLHSTKE Trigger: CTCTTTTGTGCTATGAAGCAACAGCCTCAAGATTCAGAGCTGTTGCTTTCCATAACTGGAAGTGGCTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609812.6 |
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