RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000119681

Ensembl transcript IDs: ENST00000261978.9, ENST00000553939.5, ENST00000554861.1, ENST00000556206.1, ENST00000556690.5, ENST00000557425.1

Found 1074 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGGTGGATTGTGGCTGGAAAGGGGTGTCTGCAGTGTGAGGCCATaGGGCCTTGCATGCTCGCACAGCTTGGGAGGGTGGATGAGGGCC +
Preference number: 1 (lower is better)
Translates to: DGGLWLERGVCSVRP*GLACSHSLGGWMRA
Trigger: GGCCCTCATCCACCCTCCCAAGCTGTGCGAGCATGCAAGGCCCCATGGCCTCACACTGCAGACACCCCTTTCCAGCCACAATCCACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR GCA 90 bp ATTGTGGCTGGAAAGGGGTGTCTGCAGTGTGAGGCCATGGGGCCTTaGATGCTCGCACAGCTTGGGAGGGTGGATGAGGGCCATCCTTTG +
Preference number: 1 (lower is better)
Translates to: IVAGKGCLQCEAMGP*MLAQLGRVDEGHPL
Trigger: CAAAGGATGGCCCTCATCCACCCTCCCAAGCTGTGCGAGCATGCAAGGCCCCATGGCCTCACACTGCAGACACCCCTTTCCAGCCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR TCA 90 bp TACAGGATGGAGGTGTGGCAAAATCAGGGCCCAGAACAGATTGGCTaGGTGGTGGTGATGGTTCTTAGGAGGGGGCTCTGGAGTCAGTCC +
Preference number: 1 (lower is better)
Translates to: YRMEVWQNQGPEQIG*VVVMVLRRGLWSQS
Trigger: GGACTGACTCCAGAGCCCCCTCCTAAGAACCATCACCACCACTCAGCCAATCTGTTCTGGGCCCTGATTTTGCCACACCTCCATCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR TCA 90 bp GAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGATaGAAGCAGGCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACG +
Preference number: 1 (lower is better)
Translates to: EAMTEAYSQRLSWER*KQARLIGNLWPDVT
Trigger: CGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTCATCTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR CCA 90 bp AGTGTTTATGTAATAGAGGTCTTTGTAGATGGGTGCTGTATCCCATaGCAGCCCTTGCTGCTGGTGCCCACAGGCTATCACTGGGCGGAT +
Preference number: 1 (lower is better)
Translates to: SVYVIEVFVDGCCIP*QPLLLVPTGYHWAD
Trigger: ATCCGCCCAGTGATAGCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCATCTACAAAGACCTCTATTACATAAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 90 bp CTCAAGGTTGGCAGGAAGGTGGAGATTGGAGTGTTGTGGGGGCAGTaGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTG +
Preference number: 1 (lower is better)
Translates to: LKVGRKVEIGVLWGQ*EQQLRRCSASRIYL
Trigger: CAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCACTGCCCCCACAACACTCCAATCTCCACCTTCCTGCCAACCTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR GCA 90 bp CAACAAGCTAATATCAGCCTTGCTTCTCTGAGTGAAGGGATCTTCTaGCACTCCTTGGGGTCAGAGAATGGGCTACAGGATGGAGGTGTG +
Preference number: 1 (lower is better)
Translates to: QQANISLASLSEGIF*HSLGSENGLQDGGV
Trigger: CACACCTCCATCCTGTAGCCCATTCTCTGACCCCAAGGAGTGGCAGAAGATCCCTTCACTCAGAGAAGCAAGGCTGATATTAGCTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 90 bp AGTGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTaGGGGATGGTAAGTTCTCCGATGGTGAGGTATAAGGCGGAGTGG +
Preference number: 1 (lower is better)
Translates to: SGNSSYEGVVPAGYI*GMVSSPMVRYKAEW
Trigger: CCACTCCGCCTTATACCTCACCATCGGAGAACTTACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR GCA 90 bp CCTGTAAGAAGCAGTGTTTATGTAATAGAGGTCTTTGTAGATGGGTaGTGTATCCCATGGCAGCCCTTGCTGCTGGTGCCCACAGGCTAT +
Preference number: 1 (lower is better)
Translates to: PVRSSVYVIEVFVDG*CIPWQPLLLVPTGY
Trigger: ATAGCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCATCTACAAAGACCTCTATTACATAAACACTGCTTCTTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR GCA 90 bp GCTAGTTTGGGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATaGCTGCCATCGTTTTCTGAAGGGAAAGGGCAGGGGTTTCTGAGT +
Preference number: 1 (lower is better)
Translates to: ASLGWSESLLVNSEE*LPSFSEGKGQGFLS
Trigger: ACTCAGAAACCCCTGCCCTTTCCCTTCAGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACCCAAACTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 90 bp GTTTCCTGTAAGAAGCAGTGTTTATGTAATAGAGGTCTTTGTAGATaGGTGCTGTATCCCATGGCAGCCCTTGCTGCTGGTGCCCACAGG +
Preference number: 1 (lower is better)
Translates to: VSCKKQCLCNRGLCR*VLYPMAALAAGAHR
Trigger: CCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCATCTACAAAGACCTCTATTACATAAACACTGCTTCTTACAGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR TCA 90 bp TTTGTGTCTCTTACATTCAACAAGCTAATATCAGCCTTGCTTCTCTaGGTGAAGGGATCTTCTGCCACTCCTTGGGGTCAGAGAATGGGC +
Preference number: 1 (lower is better)
Translates to: FVSLTFNKLISALLL*VKGSSATPWGQRMG
Trigger: GCCCATTCTCTGACCCCAAGGAGTGGCAGAAGATCCCTTCACTCAGAGAAGCAAGGCTGATATTAGCTTGTTGAATGTAAGAGACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 90 bp ATTTCTTTATTCCACCATGGTTCTGAACTCCCAGCTAGTTTGGGTTaGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCG +
Preference number: 1 (lower is better)
Translates to: ISLFHHGSELPASLG*SESLLVNSEECLPS
Trigger: CGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACCCAAACTAGCTGGGAGTTCAGAACCATGGTGGAATAAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR GCA 90 bp GCTCCCCTTTCTCATCAACTCCACGTATTTTTCATCATGTCCTCTTaGTGCTTTCTCAGGCTCTTTGTTCTTCTTCATTTGTGTCTCTTA +
Preference number: 1 (lower is better)
Translates to: APLSHQLHVFFIMSS*CFLRLFVLLHLCLL
Trigger: TAAGAGACACAAATGAAGAAGAACAAAGAGCCTGAGAAAGCAGCAAGAGGACATGATGAAAAATACGTGGAGTTGATGAGAAAGGGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR GCA 90 bp ATTCACTTCCATGCTCCAGTCACATGGAGCCTTGTTCATTTACATTaGCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTT +
Preference number: 1 (lower is better)
Translates to: IHFHAPVTWSLVHLH*HSSEKYEVRAFLVF
Trigger: AAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTGGAGCATGGAAGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR GCA 90 bp TGTACTTCTGTCAGCTGTTATGAGAGTACCTATTTCCCACATGCTTaGCAGCTAGGAGTCTTAACAAGCTTTTTGATCTTTGCCAATCTG +
Preference number: 1 (lower is better)
Translates to: CTSVSCYESTYFPHA*QLGVLTSFLIFANL
Trigger: CAGATTGGCAAAGATCAAAAAGCTTGTTAAGACTCCTAGCTGGCAAGCATGTGGGAAATAGGTACTCTCATAACAGCTGACAGAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCCATGGGGCCTTGCATaGTCGCACAGCTTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSPWGLA*SHSLGG
Trigger: CCCTCCCAAGCTGTGCGAGCATGCAAGGCCCCATGG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTGCAGTGTGAGGCCATaGGGCCTTGCATGCTCGCAC +
Preference number: 2 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHCSVRP*GLACSH
Trigger: GTGCGAGCATGCAAGGCCCCATGGCCTCACACTGCA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR GCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCTGGAAAGGGGTGTCTaGAGTGTGAGGCCATGGGGC +
Preference number: 2 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGELERGV*SVRPWG
Trigger: GCCCCATGGCCTCACACTGCAGACACCCCTTTCCAG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR TCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTCAAGGCCCCTGCCTGTaGCTGGAGGCCATTTCCAGG +
Preference number: 2 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSQGPCL*LEAISR
Trigger: CCTGGAAATGGCCTCCAGTCACAGGCAGGGGCCTTG...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR TCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGCGATTGGTGGTGCTTaGGCCAAGCAAGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSAIGGA*AKQGHG
Trigger: TCCATGCCCTTGCTTGGCTCAAGCACCACCAATCGC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACTGGAAAGGGGTGTCTaGAGTGTGAGGCCATGGGGC +
Preference number: 2 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPLERGV*SVRPWG
Trigger: GCCCCATGGCCTCACACTGCAGACACCCCTTTCCAG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGCCCCTGCCTGTGACTaGAGGCCATTTCCAGGTAGT +
Preference number: 2 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEAPACD*RPFPGS
Trigger: ACTACCTGGAAATGGCCTCCAGTCACAGGCAGGGGC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCAAGGCCAGGAAAGGTaGTGGACAGGGCCTCATGCG +
Preference number: 2 (lower is better)
Translates to: PQILKDLPRADVASVPVVQGQER*WTGPHA
Trigger: CGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR TCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGAAAGCAGGCAAGGCTaGTTGGAAACCTCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLESRQG*LETSGL
Trigger: CAGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR TCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAGAAAGCAGGCAAGGCTaGTTGGAAACCTCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: KDLPRADVASVPVVGSSGESRQG*LETSGL
Trigger: CAGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTC...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR GCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGAGGCCATGGGGCCTTaGATGCTCGCACAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGEAMGP*MLAQLG
Trigger: CCCAAGCTGTGCGAGCATGCAAGGCCCCATGGCCTC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR GCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGACACTGACCCCTGACTaGTACTCCTTGGCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGETLTPD*YSLAVQ
Trigger: CTGCACTGCCAAGGAGTAGCAGTCAGGGGTCAGTGT...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
3UTR-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCCCCTGCCTGTGACTaGAGGCCATTTCCAGGTAGT +
Preference number: 2 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGAPACD*RPFPGS
Trigger: ACTACCTGGAAATGGCCTCCAGTCACAGGCAGGGGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
3UTR-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATATGGTGGATTGTGGCTaGAAAGGGGTGTCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHMVDCG*KGVSAV
Trigger: CACTGCAGACACCCCTTTCCAGCCACAATCCACCAT...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTGGCCAGGAAAGGTGGTaGACAGGGCCTCATGCGGTG +
Preference number: 2 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGGQERW*TGPHAV
Trigger: CACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCC...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGATGGTGGATTGTGGCTaGAAAGGGGTGTCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLMVDCG*KGVSAV
Trigger: CACTGCAGACACCCCTTTCCAGCCACAATCCACCAT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGGGTGCTGTATCCCATaGCAGCCCTTGCTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGGCCIP*QPLLLV
Trigger: CACCAGCAGCAAGGGCTGCCATGGGATACAGCACCC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 90 bp GTAATAGAGGTCTTTGTAGATGGGTGCTGTATCCCATGGCAGCCCTaGCTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACT +
Preference number: 2 (lower is better)
Translates to: VIEVFVDGCCIPWQP*LLVPTGYHWADSAT
Trigger: AGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCATCTACAAAGACCTCTATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR TCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCTAAGCTGGGAGAGATaGAAGCAGGCAAGGCTGATT +
Preference number: 2 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLLSWER*KQARLI
Trigger: AATCAGCCTTGCCTGCTTTCATCTCTCCCAGCTTAG...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCTGATTGGAAACCTCTaGCCTGATGTCACGGTGTCT +
Preference number: 2 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGELIGNL*PDVTVS
Trigger: AGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACTGATTGGAAACCTCTaGCCTGATGTCACGGTGTCT +
Preference number: 2 (lower is better)
Translates to: KDLPRADVASVPVVGSSGLIGNL*PDVTVS
Trigger: AGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTTGCAGTGTGAGGCCATaGGGCCTTGCATGCTCGCAC +
Preference number: 2 (lower is better)
Translates to: LLVPTGYHWADSATEYFLCSVRP*GLACSH
Trigger: GTGCGAGCATGCAAGGCCCCATGGCCTCACACTGCA...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR TCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGCGATTGGTGGTGCTTaGGCCAAGCAAGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: LLVPTGYHWADSATEYFLAIGGA*AKQGHG
Trigger: TCCATGCCCTTGCTTGGCTCAAGCACCACCAATCGC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR GCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTGTCTTTGTAGATGGGTaGTGTATCCCATGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVVFVDG*CIPWQP
Trigger: GGGCTGCCATGGGATACAGCACCCATCTACAAAGAC...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGCCCCTGCCTGTGACTaGAGGCCATTTCCAGGTAGT +
Preference number: 2 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHAPACD*RPFPGS
Trigger: ACTACCTGGAAATGGCCTCCAGTCACAGGCAGGGGC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
3UTR-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTGATGATGGTGGATTGTaGCTGGAAAGGGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSDDGGL*LERGVC
Trigger: GCAGACACCCCTTTCCAGCCACAATCCACCATCATC...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR CCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGGGCCCAGAACAGATTaGCTGAGTGGTGGTGATGGT +
Preference number: 2 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGGPRTD*LSGGDG
Trigger: ACCATCACCACCACTCAGCCAATCTGTTCTGGGCCC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR TCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTTGGAAACCTCTGGCCTaGTGTCACGGTGTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: GWSESLLVNSEECLPSFSWKPLA*CHGVFP
Trigger: TGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCA...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 90 bp AATATCAGCCTTGCTTCTCTGAGTGAAGGGATCTTCTGCCACTCCTaGGGGTCAGAGAATGGGCTACAGGATGGAGGTGTGGCAAAATCA +
Preference number: 2 (lower is better)
Translates to: NISLASLSEGIFCHS*GSENGLQDGGVAKS
Trigger: TGATTTTGCCACACCTCCATCCTGTAGCCCATTCTCTGACCCCAAGGAGTGGCAGAAGATCCCTTCACTCAGAGAAGCAAGGCTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR TCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGAGGGCATGGAGGCAATaGCCGAAGCTTACAGCCAGA +
Preference number: 2 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKRAWRQ*PKLTAR
Trigger: TCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCT...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR TCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGGTGGGATCGTCAGGATaGTGGTGGATTGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKVGSSG*WWIVAG
Trigger: TCCAGCCACAATCCACCATCATCCTGACGATCCCAC...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR GCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAAGCCCTTGCTGCTGGTaGCCACAGGCTATCACTGGG +
Preference number: 2 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKSPCCW*PQAITG
Trigger: CCCAGTGATAGCCTGTGGGCACCAGCAGCAAGGGCT...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 90 bp ATGCACATTTCTTTATTCCACCATGGTTCTGAACTCCCAGCTAGTTaGGGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTG +
Preference number: 2 (lower is better)
Translates to: MHISLFHHGSELPAS*GWSESLLVNSEECL
Trigger: CAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACCCAAACTAGCTGGGAGTTCAGAACCATGGTGGAATAAAGAAATGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 90 bp AGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAGAGTCATTTCCCATaGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: SQSFPCLLIVKSHFP*EPIIGYQQSWPGSR
Trigger: CCTACTCCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTTTACTATTAAAAGACAAGGAAAGCTCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR TCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTATTGGCTGAGTGGTGGTaGTGGTTCTTAGGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLLAEWW*WFLGGG
Trigger: GCCCCCTCCTAAGAACCATCACCACCACTCAGCCAA...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 90 bp CATTCACTTCCATGCTCCAGTCACATGGAGCCTTGTTCATTTACATaGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: HSLPCSSHMEPCSFT*PFIREVRSQSFPCL
Trigger: AAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTGGAGCATGGAAGTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR CCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTACCTCTGTCCCAGTTGTaGGATCGTCAGGATGATGGT +
Preference number: 2 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLPLSQL*DRQDDG
Trigger: ACCATCATCCTGACGATCCCACAACTGGGACAGAGG...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 90 bp ATTAAGAAAGTAGCATTCACTTCCATGCTCCAGTCACATGGAGCCTaGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: IKKVAFTSMLQSHGA*FIYIAIHQRSTKSE
Trigger: CTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTGGAGCATGGAAGTGAATGCTACTTTCTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR CCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAAGAGGTCTTTGTAGATaGGTGCTGTATCCCATGGCA +
Preference number: 2 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKRGLCR*VLYPMA
Trigger: TGCCATGGGATACAGCACCCATCTACAAAGACCTCT...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 90 bp TCCACGTATTTTTCATCATGTCCTCTTGCTGCTTTCTCAGGCTCTTaGTTCTTCTTCATTTGTGTCTCTTACATTCAACAAGCTAATATC +
Preference number: 2 (lower is better)
Translates to: STYFSSCPLAAFSGS*FFFICVSYIQQANI
Trigger: GATATTAGCTTGTTGAATGTAAGAGACACAAATGAAGAAGAACAAAGAGCCTGAGAAAGCAGCAAGAGGACATGATGAAAAATACGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 72 bp TTGTGGCTGGAAAGGGGTGTCTGCAGTGTGAGGCCATaGGGCCTTGCATGCTCGCACAGCTTGGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LWLERGVCSVRP*GLACSHSLGGW
Trigger: CCACCCTCCCAAGCTGTGCGAGCATGCAAGGCCCCATGGCCTCACACTGCAGACACCCCTTTCCAGCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR-3UTR CAA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGCATGCTCGCACAGCTaGGGAGGGTGGATGAGGGCC +
Preference number: 3 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLACSHS*GGWMRA
Trigger: GGCCCTCATCCACCCTCCCAAGCTGTGCGAGCATGC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR TCA 72 bp ATGGTGGATTGTGGCTGGAAAGGGGTGTCTGCAGTGTaGGGCCATGGGGCCTTGCATGCTCGCACAGCTTGG +
Preference number: 3 (lower is better)
Translates to: MVDCGWKGVSAV*GHGALHARTAW
Trigger: CCAAGCTGTGCGAGCATGCAAGGCCCCATGGCCTCACACTGCAGACACCCCTTTCCAGCCACAATCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR GCA 72 bp ATGGGTGCTGTATCCCATGGCAGCCCTTGCTGCTGGTaGCCACAGGCTATCACTGGGCGGATTCAGCTACTG +
Preference number: 3 (lower is better)
Translates to: MGAVSHGSPCCW*PQAITGRIQLL
Trigger: CAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 72 bp GGCAGGAAGGTGGAGATTGGAGTGTTGTGGGGGCAGTaGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: GRKVEIGVLWGQ*EQQLRRCSASR
Trigger: CCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCACTGCCCCCACAACACTCCAATCTCCACCTTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR TCA 72 bp AAAATCAGGGCCCAGAACAGATTGGCTGAGTGGTGGTaGTGGTTCTTAGGAGGGGGCTCTGGAGTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: KIRAQNRLAEWW*WFLGGGSGVSP
Trigger: GGGACTGACTCCAGAGCCCCCTCCTAAGAACCATCACCACCACTCAGCCAATCTGTTCTGGGCCCTGATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR TCA 72 bp ACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGATaGAAGCAGGCAAGGCTGATTGGAAACCTCTGGCCT +
Preference number: 3 (lower is better)
Translates to: TEAYSQRLSWER*KQARLIGNLWP
Trigger: AGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTCATCTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR CCA 72 bp GTAATAGAGGTCTTTGTAGATGGGTGCTGTATCCCATaGCAGCCCTTGCTGCTGGTGCCCACAGGCTATCAC +
Preference number: 3 (lower is better)
Translates to: VIEVFVDGCCIP*QPLLLVPTGYH
Trigger: GTGATAGCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCATCTACAAAGACCTCTATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR TCA 72 bp ATGAAAGCAGGCAAGGCTGATTGGAAACCTCTGGCCTaGTGTCACGGTGTCTTCCCAGCTAGGAAATCATCC +
Preference number: 3 (lower is better)
Translates to: MKAGKADWKPLA*CHGVFPARKSS
Trigger: GGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
3UTR CCA 72 bp TTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTaGCCAGGGAGTAGGCACAGCCTCATCTCTAATATT +
Preference number: 3 (lower is better)
Translates to: FPLEPIIGYQQS*PGSRHSLISNI
Trigger: AATATTAGAGATGAGGCTGTGCCTACTCCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR-3UTR CAA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATCCCATGGCAGCCCTaGCTGCTGGTGCCCACAGGC +
Preference number: 3 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLIPWQP*LLVPTG
Trigger: GCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGAT...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 72 bp TTCCACCATGGTTCTGAACTCCCAGCTAGTTTGGGTTaGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGC +
Preference number: 3 (lower is better)
Translates to: FHHGSELPASLG*SESLLVNSEEC
Trigger: GCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACCCAAACTAGCTGGGAGTTCAGAACCATGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR TCA 72 bp CTTACATTCAACAAGCTAATATCAGCCTTGCTTCTCTaGGTGAAGGGATCTTCTGCCACTCCTTGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: LTFNKLISALLL*VKGSSATPWGQ
Trigger: CTGACCCCAAGGAGTGGCAGAAGATCCCTTCACTCAGAGAAGCAAGGCTGATATTAGCTTGTTGAATGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 72 bp AAGAAGCAGTGTTTATGTAATAGAGGTCTTTGTAGATaGGTGCTGTATCCCATGGCAGCCCTTGCTGCTGGT +
Preference number: 3 (lower is better)
Translates to: KKQCLCNRGLCR*VLYPMAALAAG
Trigger: ACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCATCTACAAAGACCTCTATTACATAAACACTGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CCA 72 bp AGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTaGGGGATGGTAAGTTCTCCGATGGTGAGGTATAAG +
Preference number: 3 (lower is better)
Translates to: SSYEGVVPAGYI*GMVSSPMVRYK
Trigger: CTTATACCTCACCATCGGAGAACTTACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTACACGCCGCGACTGCTaGGCGCGGGACGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVTRRDC*ARDGLL
Trigger: CAGGAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGT...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCAGAGCTGCGGGCGGCTaGAGGAGCCCCGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAARAAGG*RSPGSG
Trigger: GCCAGAACCGGGGCTCCTGCAGCCGCCCGCAGCTCT...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCCAGGGTCCCAGCTGGTaGCGACTGTGGTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAAQGPSW*RLWCGR
Trigger: CCGCCCGCACCACAGTCGCCACCAGCTGGGACCCTG...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTACCCCGCCCCGCACCTaGGCCACCTGGTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVTPPRT*ATWWIC
Trigger: GCAGATCCACCAGGTGGCCCAGGTGCGGGGCGGGGT...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATGGCCCGGGTCCGGGGTaGTGGTTGCTGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHGPGPG*WLLLAQ
Trigger: CTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCC...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATCCGGGTCCGGGGTGCTaGTTGCTGCTGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHPGPGC*LLLAQG
Trigger: CCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGG...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTCAGGAGCCCCGGTTCTaGCACGGCGGCTCGCAAACG +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVQEPRF*HGGSQT
Trigger: CGTTTGCGAGCCGCCGTGCCAGAACCGGGGCTCCTG...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCAGGAGCCAGCCGTGTTaGTGCAGACTCCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAARSQPC*CRLRRG
Trigger: GCCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCT...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGAGTCTAGGGGGCCCTaGAGCGGCCGACTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCESRGP*SGRLGA
Trigger: GGCCCCCAGTCGGCCGCTTCAGGGCCCCCTAGACTC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGAGACGTTCCTCCCCGTaGGCCGCCCTCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVRRSSP*AALAAG
Trigger: CCCCGCCGCGAGGGCGGCTCACGGGGAGGAACGTCT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTAAGACCCGTGGCTGTTaGGGCACTCGCCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVKTRGC*GTRRGV
Trigger: CACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTT...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCACACGCCGCGACTGCTaGGCGCGGGACGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPTRRDC*ARDGLL
Trigger: CAGGAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTGGACACGCCGCGACTaGTGCGCGCGGGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCWTRRD*CARDGL
Trigger: GAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGACACGCCGCGACTaGTGCGCGCGGGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSWTRRD*CARDGL
Trigger: GAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCA...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGGACACGCCGCGACTaGTGCGCGCGGGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPWTRRD*CARDGL
Trigger: GAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCA...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGGCCCGGGTCCGGGGTaGTGGTTGCTGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHGPGPG*WLLLAQ
Trigger: CTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTCGAGGCCTGGGTGCTaGTGGGGGCAGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHSRPGC*WGQWPR
Trigger: CCTCGGCCACTGCCCCCAGCAGCACCCAGGCCTCGA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGACGACCCGGAGGGGCTaGCTCTCTGCTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLTTRRG*LSAGPG
Trigger: GCCCGGGCCAGCAGAGAGGCAGCCCCTCCGGGTCGT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTCCGTGGGGTGCGCAGTaGTCCTCCCCCATGCACTCA +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVPWGAQ*SSPMHS
Trigger: TGAGTGCATGGGGGAGGAGCACTGCGCACCCCACGG...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTCCCGGCCTCCCGCTCTaGCTCAATGCGAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVPGLPL*LNASHV
Trigger: AACGTGGCTCGCATTGAGGCAGAGCGGGAGGCCGGG...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTGGTCCGCGGCCTCATaGCGCGGGGCGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCWSAAS*RGAAGE
Trigger: CTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCGGGTCCGGGGTGCTaGTTGCTGCTGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPGPGC*LLLAQG
Trigger: CCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCGCTGGCTACTGGCCGTaGCAGTCGGGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAAAGYWP*QSGEVG
Trigger: TCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGC...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGCGGGACCCCCTCCCTaGAGGCTCCCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHAGPPP*RLPVRL
Trigger: CAGCCGGACAGGGAGCCTCCAGGGAGGGGGTCCCGC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGCGGGACCCCCTCCCTaGAGGCTCCCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCAGPPP*RLPVRL
Trigger: CAGCCGGACAGGGAGCCTCCAGGGAGGGGGTCCCGC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCAGGCCTGGGTGCTGCTaGGGGCAGTGGCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSRPGCC*GQWPRG
Trigger: CCCCCTCGGCCACTGCCCCCAGCAGCACCCAGGCCT...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGAGGCCTGGGTGCTGCTaGGGGCAGTGGCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLRPGCC*GQWPRG
Trigger: CCCCCTCGGCCACTGCCCCCAGCAGCACCCAGGCCT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGGGCTGCCTCTCTGCTaGCCCGGGCAGTGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCGLPLC*PGQCPA
Trigger: AGCGGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCCTGCGCAGGTTGGGTaGACGCTCGGCCCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLPAQVG*TLGPAS
Trigger: CGACGCTGGGCCGAGCGTTCACCCAACCTGCGCAGG...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCCTGCGCAGGTTGGGTaGACGCTCGGCCCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSPAQVG*TLGPAS
Trigger: CGACGCTGGGCCGAGCGTTCACCCAACCTGCGCAGG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCAAGCCAGGTGTCCGTaGCGACCCGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPQARCP*RPGGAA
Trigger: GGCAGCCCCTCCGGGTCGTCACGGACACCTGGCTTG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATAACCAGGCACGGTGTTaGGGCACCGGCCGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHNQARC*GTGRSG
Trigger: GCCCGAACGGCCGGTGCCTCAACACCGTGCCTGGTT...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGCGGCTGGAGAGTGGTaGGCGCGGGCACCGCGAAGA +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLAAGEW*ARAPRR
Trigger: TCTTCGCGGTGCCCGCGCGCACCACTCTCCAGCCGC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCTTGGCTGCAGCCGCTaGCGGGTAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLGCSR*RVAAPR
Trigger: CCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGAGCTGCGGGCGGCTaGAGGAGCCCCGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHRAAGG*RSPGSG
Trigger: GCCAGAACCGGGGCTCCTGCAGCCGCCCGCAGCTCT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCGGCAGACACAGAGCTaGGGGCGGCTGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRQTQS*GRLQEP
Trigger: GGGCTCCTGCAGCCGCCCGCAGCTCTGTGTCTGCCG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGCCCCGCTGCTCCTCTaGCCTTGCTCCCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEAPLLL*PCSLGG
Trigger: GCCCCCAAGGGAGCAAGGGCAGAGGAGCAGCGGGGC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGCCCCGCTGCTCCTCTaGCCTTGCTCCCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHAPLLL*PCSLGG
Trigger: GCCCCCAAGGGAGCAAGGGCAGAGGAGCAGCGGGGC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACGGGCAGTGCCCCGCTaGTCCTCTGCCCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGRAVPR*SSALAP
Trigger: GGGAGCAAGGGCAGAGGAGCAGCGGGGCACTGCCCG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGACGACCCGGAGGGGCTaGCTCTCTGCTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVTTRRG*LSAGPG
Trigger: GCCCGGGCCAGCAGAGAGGCAGCCCCTCCGGGTCGT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCCGGGCTGCGGGCTTTaGTCCGCGGCCTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVPGCGL*SAASWR
Trigger: GCGCCATGAGGCCGCGGACCAAAGCCCGCAGCCCGG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACCGGGCTGCGGGCTTTaGTCCGCGGCCTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGPGCGL*SAASWR
Trigger: GCGCCATGAGGCCGCGGACCAAAGCCCGCAGCCCGG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACCGGGTCCGGGGTGCTaGTTGCTGCTGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGPGPGC*LLLAQG
Trigger: CCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCAGCCCCAGACCGCTGTaGGGTCCCCAGGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPSPRPL*GPQAWE
Trigger: CTCCCACGCCTGGGGACCCCACAGCGGTCTGGGGCT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCTTCCAGCAAGGCCCTaGGGCGGGACCCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLLPARP*GGTPSL
Trigger: CAGGGAGGGGGTCCCGCCCCAGGGCCTTGCTGGAAG...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCTTCCAGCAAGGCCCTaGGGCGGGACCCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHLPARP*GGTPSL
Trigger: CAGGGAGGGGGTCCCGCCCCAGGGCCTTGCTGGAAG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCACCCCGCCCCGCACCTaGGCCACCTGGTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCTPPRT*ATWWIC
Trigger: GCAGATCCACCAGGTGGCCCAGGTGCGGGGCGGGGT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGGCTGCCTCTCTGCTaGCCCGGGCAGTGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVGLPLC*PGQCPA
Trigger: AGCGGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCC...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTCACCCTTGTCAGGGATaGTCCCGGCCTCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVHPCQG*SRPQAR
Trigger: CCTGGCTTGAGGCCGGGACCATCCCTGACAAGGGTG...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGTCACCCAGGGGGCTaGGCCGGTAGCCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHSHPGG*AGSPHR
Trigger: GCGATGGGGGCTACCGGCCCAGCCCCCTGGGTGACT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGAGTCACCCAGGGGGCTaGGCCGGTAGCCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLSHPGG*AGSPHR
Trigger: GCGATGGGGGCTACCGGCCCAGCCCCCTGGGTGACT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGCAGTCCATGCGGGTaGGGGCCGGGGCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHSSPCG*GPGHGP
Trigger: GGGACCATGCCCCGGCCCCCACCCGCATGGACTGCT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGCAGTCCATGCGGGTaGGGGCCGGGGCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCSSPCG*GPGHGP
Trigger: GGGACCATGCCCCGGCCCCCACCCGCATGGACTGCT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCCTCAGTGCCTGCAGCCGTCTaGAGGGGACCCGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: HSFTSTQAMWAASSWKPSVPAAV*RGPGRF
Trigger: AAACCGTCCGGGTCCCCTTCAGACGGCTGCAGGCAC...TGAGGGCTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACCTGCGCAGGTTGGGTaGACGCTCGGCCCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGPAQVG*TLGPAS
Trigger: CGACGCTGGGCCGAGCGTTCACCCAACCTGCGCAGG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGAGGCCTGTGGGGCATaGGGCCCGGCTGGCACACTC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGEACGA*GPAGTL
Trigger: GAGTGTGCCAGCCGGGCCTCATGCCCCACAGGCCTC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAACCAGGCACGGTGTTaGGGCACCGGCCGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGNQARC*GTGRSG
Trigger: GCCCGAACGGCCGGTGCCTCAACACCGTGCCTGGTT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCGCACTCCTCCGCCTaGAGCCCTTCGAAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPHSSA*SPSKPA
Trigger: AGCCGGCTTCGAAGGGCTTCAGGCGGAGGAGTGCGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCCGCACTCCTCCGCCTaGAGCCCTTCGAAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHPHSSA*SPSKPA
Trigger: AGCCGGCTTCGAAGGGCTTCAGGCGGAGGAGTGCGG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGGGCTCGCACGGCTGCTaGACCTTCGCGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKGSHGC*TFAPPP
Trigger: GGGAGGAGGCGCGAAGGTGCAGCAGCCGTGCGAGCC...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGCTGGCCCAGGGGAGTaGTTCTCCGGGTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHAGPGE*FSGSAQ
Trigger: CTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGCTGGCCCAGGGGAGTaGTTCTCCGGGTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCAGPGE*FSGSAQ
Trigger: CTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAAGAGCTGCGGGCGGCTaGAGGAGCCCCGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPRAAGG*RSPGSG
Trigger: GCCAGAACCGGGGCTCCTGCAGCCGCCCGCAGCTCT...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATGTGCTCTGGCCAAGGTaGCCTCTCCAGCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHVLWPR*PLQPHC
Trigger: GCAGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCAC...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTGGTGCTGGCGGCTGTaGTCTGGCCAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHWCWRL*SGQGAL
Trigger: GAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGGGCGGCGACTGTGGTaGTGGCGGCTGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPGRRLW*WRLCSG
Trigger: GCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGGCTCCCTGTCCGGCTaGGGGATAGGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSGSLSG*GIGRWQ
Trigger: CTGCCACCTGCCTATCCCGCAGCCGGACAGGGAGCC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCCTGCAGCAGCATATCTaGTTGGTGATCCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAALQQHI*LVIRWA
Trigger: GGCCCAGCGGATCACCAAGCAGATATGCTGCTGCAG...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACGGGCAGTGCCCCGCTaGTCCTCTGCCCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPRAVPR*SSALAP
Trigger: GGGAGCAAGGGCAGAGGAGCAGCGGGGCACTGCCCG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACGGGCAGTGCCCCGCTaGTCCTCTGCCCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRAVPR*SSALAP
Trigger: GGGAGCAAGGGCAGAGGAGCAGCGGGGCACTGCCCG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTCGGTGTTGGTGCACTaGCCCCCGCTGCACACCCCT +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHSVLVH*PPLHTP
Trigger: AGGGGTGTGCAGCGGGGGGCAGTGCACCAACACCGA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGCACTCGCCGTGGGGTaGGCAGTGCTCCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLALAVG*AVLLPH
Trigger: ATGGGGGAGGAGCACTGCGCACCCCACGGCGAGTGC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTCCTCCGTGCTGCTGGTaGTGTTCATGCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVPPCCW*CSCSAA
Trigger: AGCAGCGCTGCATGAACAGCACCAGCAGCACGGAGG...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATCGCTCCTACTCCAGCTaGGCTCGCACGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHRSYSS*ARTAAA
Trigger: TGCAGCAGCCGTGCGAGCCCAGCTGGAGTAGGAGCG...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTCCGGGCTGCGGGCTTTaGTCCGCGGCCTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSPGCGL*SAASWR
Trigger: GCGCCATGAGGCCGCGGACCAAAGCCCGCAGCCCGG...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACCGGGTCTGCGCAGGTaGCTGGACACGCCGCGACTG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGPGLRR*LDTPRL
Trigger: CAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCCGGGTCTGCGCAGGTaGCTGGACACGCCGCGACTG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVPGLRR*LDTPRL
Trigger: CAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCAGGAGCCCCGGTTCTaGCACGGCGGCTCGCAAACG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPQEPRF*HGGSQT
Trigger: CGTTTGCGAGCCGCCGTGCCAGAACCGGGGCTCCTG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCCTCATGCTCCTGCGCAGGTTaGGTGAACGCTCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HSFTSTQAMWAASSWKPSCSCAG*VNARPS
Trigger: GCTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCA...TGAGGGCTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCGGGCGGCGACTGTaGTGCTGGCGGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSCGRRL*CWRLCS
Trigger: AGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCA...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTGCGGGCGGCGACTGTaGTGCTGGCGGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCCGRRL*CWRLCS
Trigger: AGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCAGCTGGTGGCGACTGTaGTGCGGGCGGCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSSWWRL*CGRRLW
Trigger: CCACAGTCGCCGCCCGCACCACAGTCGCCACCAGCT...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCACCCCGCCCCGCACCTaGGCCACCTGGTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCTPPRT*ATWWIC
Trigger: GCAGATCCACCAGGTGGCCCAGGTGCGGGGCGGGGT...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCGCATCTGTCAATGCCTaGGGTGCTCAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAAASVNA*GAQGHQ
Trigger: CTGGTGACCCTGAGCACCCCAGGCATTGACAGATGC...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCTTGGTGCACTTTCCATaGGCACAGACCCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAALVHFP*AQTPGV
Trigger: GACTCCCGGGGTCTGTGCCCATGGAAAGTGCACCAA...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTGGCATGGTCCCCCGTTaGGGCCTCAGACATACTCTG +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVGMVPR*GLRHTL
Trigger: CAGAGTATGTCTGAGGCCCCAACGGGGGACCATGCC...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGATCCGGCCCAGGACACTaGAGCAGGGCGCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGSGPGH*SRAHGP
Trigger: AGGGCCATGCGCCCTGCTCCAGTGTCCTGGGCCGGA...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGCCGGCTGGGGGCTCTaGATGGCTGGCCACGTAGTG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSAGWGL*MAGHVV
Trigger: CACTACGTGGCCAGCCATCCAGAGCCCCCAGCCGGC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCCTTCGAAGCCGGCTaGGGGCTCTGGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPFEAG*GLWMAG
Trigger: GCCAGCCATCCAGAGCCCCCAGCCGGCTTCGAAGGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000556690.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGTGCCTGCAGCCGTCTaGAGGGGACCCGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPVPAAV*RGPGRF
Trigger: AAACCGTCCGGGTCCCCTTCAGACGGCTGCAGGCAC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGGGTCCCTTTGGGCATaGCCCGCGCCCACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHGSLWA*PAPTKR
Trigger: TCTCTTCGTGGGCGCGGGTCATGCCCAAAGGGACCC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGACGTTCCTCCCCGTaGGCCGCCCTCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHRRSSP*AALAAG
Trigger: CCCCGCCGCGAGGGCGGCTCACGGGGAGGAACGTCT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGCCGTGGCAGTCGGGTaGAGTCGGACAGTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPAVAVG*SRTVRD
Trigger: GTCCCGCACTGTCCGACTTCACCCGACTGCCACGGC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCTGGTGGATCTGCACTaGGGCCTCGGGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLVDLH*GLGWVV
Trigger: CACCACCCACCCGAGGCCTCAGTGCAGATCCACCAG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCTCCTGTGTCGCCCCTaGGGTGGCCAGAGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGELLCRP*GGQSVA
Trigger: GGCTACACTCTGGCCACCTCAGGGGCGACACAGGAG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAAGACCCGTGGCTGTTaGGGCACTCGCCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCKTRGC*GTRRGV
Trigger: CACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAAGACCCGTGGCTGTTaGGGCACTCGCCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHKTRGC*GTRRGV
Trigger: CACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGTGCGGTCCGCTGAGTaGCCGGCTGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEVRSAE*PAVLGK
Trigger: CTTCCCCAACACAGCCGGTCACTCAGCGGACCGCAC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGTGCGGTCCGCTGAGTaGCCGGCTGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPVRSAE*PAVLGK
Trigger: CTTCCCCAACACAGCCGGTCACTCAGCGGACCGCAC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTGGCTCGCACGGCTGCTaGACCTTCGCGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVGSHGC*TFAPPP
Trigger: GGGAGGAGGCGCGAAGGTGCAGCAGCCGTGCGAGCC...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCTGGGCTCGCACGGCTaGTGCACCTTCGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKLGSHG*CTFAPP
Trigger: AGGAGGCGCGAAGGTGCAGCAGCCGTGCGAGCCCAG...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGTGCTTCTCCGGGTCTaGGCAGGTGGCTGGACACGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPVLLRV*AGGWTR
Trigger: GCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCAC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCTGGCCCAGGGGAGTaGTTCTCCGGGTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGAGPGE*FSGSAQ
Trigger: CTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCGGGGTGCTGGTTGCTaGTGGCCCAGGGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRGAGC*WPRGVL
Trigger: AAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCGGGGTGCTGGTTGCTaGTGGCCCAGGGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPRGAGC*WPRGVL
Trigger: AAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGCCCAGCGTCGAGGTaGCAGCCTGGAGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCGPASR*QPGVLG
Trigger: CCCCAGAACTCCAGGCTGGCACCTCGACGCTGGGCC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGTGCTCTGGCCAAGGTaGCCTCTCCAGCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLVLWPR*PLQPHC
Trigger: GCAGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCAC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTGGTGCTGGCGGCTGTaGTCTGGCCAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHWCWRL*SGQGAL
Trigger: GAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCGGGACAACCCCACGTaGTGCTGGGAAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSRDNPT*CWEGWV
Trigger: GACCCACCCTTCCCAGCAGCACGTGGGGTTGTCCCG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCGGGACAACCCCACGTaGTGCTGGGAAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRDNPT*CWEGWV
Trigger: GACCCACCCTTCCCAGCAGCACGTGGGGTTGTCCCG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTGTACCGCCTGTTGGGTaGCATCTCTCTGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVVPPVG*HLSAQG
Trigger: GCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTAC...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCAGACTTGGGATCGTaGCCATGGCCGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPDLGS*PWPPWL
Trigger: CAGCCAGGGCGGCCATGGGCACGATCCCAAGTCTGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTCCCTTGGGGGCCTTaGCAGTTCCTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLPWGP*QFLLLG
Trigger: GCCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCTCCCTTGGGGGCCTTaGCAGTTCCTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLPWGP*QFLLLG
Trigger: GCCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCTGCTCCTCTGCCCTTaGTCCCTTGGGGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHLLLCP*SLGGLA
Trigger: GGCAAGGCCCCCAAGGGAGCAAGGGCAGAGGAGCAG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGAGGGGCTGCCTCTCTaGTGGCCCGGGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQEGLPL*WPGQCP
Trigger: GGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCCCTC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTCGGTGTTGGTGCACTaGCCCCCGCTGCACACCCCT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPSVLVH*PPLHTP
Trigger: AGGGGTGTGCAGCGGGGGGCAGTGCACCAACACCGA...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGCACTCGCCGTGGGGTaGGCAGTGCTCCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCALAVG*AVLLPH
Trigger: ATGGGGGAGGAGCACTGCGCACCCCACGGCGAGTGC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCCCGGCCTCCCGCTCTaGCTCAATGCGAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLPGLPL*LNASHV
Trigger: AACGTGGCTCGCATTGAGGCAGAGCGGGAGGCCGGG...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCCCGGCCTCCCGCTCTaGCTCAATGCGAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHPGLPL*LNASHV
Trigger: AACGTGGCTCGCATTGAGGCAGAGCGGGAGGCCGGG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATGAGGCCATGGGGCCTTaGATGCTCGCACAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHEAMGP*MLAQLG
Trigger: CCCAAGCTGTGCGAGCATGCAAGGCCCCATGGCCTC...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCGCTCCTACTCCAGCTaGGCTCGCACGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSRSYSS*ARTAAA
Trigger: TGCAGCAGCCGTGCGAGCCCAGCTGGAGTAGGAGCG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTTGTGGTCGGCACGCTaGACGCCCGCGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLWSAR*TPAGCS
Trigger: AGAACAGCCCGCGGGCGTCCAGCGTGCCGACCACAA...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACAGGAGCCCCGGTTCTaGCACGGCGGCTCGCAAACG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGQEPRF*HGGSQT
Trigger: CGTTTGCGAGCCGCCGTGCCAGAACCGGGGCTCCTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTCCTGCGCAGGTTaGGTGAACGCTCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPCSCAG*VNARPS
Trigger: GCTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCA...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCTGGCGGCTGTGCTCTaGCCAAGGTGCCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLAAVL*PRCPLQ
Trigger: CTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCGGCGACTGTGGTGCTaGCGGCTGTGCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGERRLWC*RLCSGQ
Trigger: TTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGATGCGGGCGGCGACTGTaGTGCTGGCGGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGCGRRL*CWRLCS
Trigger: AGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCA...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCACTCAGGGTCCCAGCTaGTGGCGACTGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPTQGPS*WRLWCG
Trigger: CCCGCACCACAGTCGCCACCAGCTGGGACCCTGAGT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGTGCCCATGGCCGCCCTaGCTGTACAGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGECPWPP*LYRVVV
Trigger: CACCACCACCCTGTACAGCCAGGGCGGCCATGGGCA...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTGCCCATGGCCGCCCTaGCTGTACAGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCCPWPP*LYRVVV
Trigger: CACCACCACCCTGTACAGCCAGGGCGGCCATGGGCA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGCAGAACTTCCCGGTaGAGTTGGCGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLGRTSR*SWRGTS
Trigger: GCTGGTGCCCCGCCAACTCCACCGGGAAGTTCTGCC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGGCAGAACTTCCCGGTaGAGTTGGCGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCGRTSR*SWRGTS
Trigger: GCTGGTGCCCCGCCAACTCCACCGGGAAGTTCTGCC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGAGGAGCCAGCCGTGTTaGTGCAGACTCCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLRSQPC*CRLRRG
Trigger: GCCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCAGGAGCCAGCCGTGTTaGTGCAGACTCCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPRSQPC*CRLRRG
Trigger: GCCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTTGAGGCACTCGCCGTaGGGTGCGCAGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHLRHSP*GAQCSS
Trigger: GGAGGAGCACTGCGCACCCCACGGCGAGTGCCTCAA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCGGCAGTGCCCCTCCTaGGCATCGTACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPRQCPS*ASYSSR
Trigger: CCTGGAGGAGTACGATGCCCAGGAGGGGCACTGCCG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGATCCGGCCCAGGACACTaGAGCAGGGCGCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGSGPGH*SRAHGP
Trigger: AGGGCCATGCGCCCTGCTCCAGTGTCCTGGGCCGGA...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCCCCAGCTAGCGCCCTaGGTGCAGCAGCATTCAGCC +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEPQLAP*VQQHSA
Trigger: GGCTGAATGCTGCTGCACCCAGGGCGCTAGCTGGGG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCCCAGCTAGCGCCCTaGGTGCAGCAGCATTCAGCC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPQLAP*VQQHSA
Trigger: GGCTGAATGCTGCTGCACCCAGGGCGCTAGCTGGGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCACAGAGCACACTGCTaGCTCCAGGCCTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHHRAHC*LQASPS
Trigger: GGACGGCGAGGCCTGGAGCCAGCAGTGTGCTCTGTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCAAGGAGACTCAAGGATaGGTGTGCGGTCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: EALKTVTGVALPHAHTAAKETQG*VCGPLS
Trigger: ACTCAGCGGACCGCACACCCATCCTTGAGTCTCCTT...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCGAAGAGAGCCAGGGTaGGCGGCAGGAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCRREPG*AAGSLS
Trigger: GGAGAGGCTTCCTGCCGCTCACCCTGGCTCTCTTCG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGGGTCCCTTTGGGCATaGCCCGCGCCCACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPGSLWA*PAPTKR
Trigger: TCTCTTCGTGGGCGCGGGTCATGCCCAAAGGGACCC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGGGTCCCTTTGGGCATaGCCCGCGCCCACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGGSLWA*PAPTKR
Trigger: TCTCTTCGTGGGCGCGGGTCATGCCCAAAGGGACCC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGCCTCGGGTGGGTGGTaGATGTGCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHASGGW*MCTFTR
Trigger: CCTGGTGAAGGTGCACATTCACCACCCACCCGAGGC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGTGACCTGGCCAGCCTaGGAGTCACCCTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEVTWPA*ESPLSG
Trigger: CCCTGACAAGGGTGACTCTCAGGCTGGCCAGGTCAC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGTGACCTGGCCAGCCTaGGAGTCACCCTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPVTWPA*ESPLSG
Trigger: CCCTGACAAGGGTGACTCTCAGGCTGGCCAGGTCAC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAGGACCCCACGCGGTTaGTGCAGCGCCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGRTPRG*CSALFP
Trigger: AGGGAAAAGGGCGCTGCATCAACCGCGTGGGGTCCT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACTCCTGTGTCGCCCCTaGGGTGGCCAGAGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLLCRP*GGQSVA
Trigger: GGCTACACTCTGGCCACCTCAGGGGCGACACAGGAG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGTGCGGTCCGCTGAGTaGCCGGCTGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPVRSAE*PAVLGK
Trigger: CTTCCCCAACACAGCCGGTCACTCAGCGGACCGCAC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCAAGGCCCCTGCCTGTaGCTGGAGGCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCQGPCL*LEAISR
Trigger: CCTGGAAATGGCCTCCAGTCACAGGCAGGGGCCTTG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTTTGCTCCACAGATTCTaGAGGACCTCCCTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVLLHRF*RTSLGQ
Trigger: CTGCCCTAGGGAGGTCCTTCAGAATCTGTGGAGCAA...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTGGGCTCGCACGGCTaGTGCACCTTCGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVLGSHG*CTFAPP
Trigger: AGGAGGCGCGAAGGTGCAGCAGCCGTGCGAGCCCAG...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATACACGCCGCGACTGCTaGGCGCGGGACGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHTRRDC*ARDGLL
Trigger: CAGGAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGCGGCAGACACAGAGCTaGGGGCGGCTGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQRQTQS*GRLQEP
Trigger: GGGCTCCTGCAGCCGCCCGCAGCTCTGTGTCTGCCG...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCAGCCGCACTGCTCCTaGGCAGGTTGGGTGAACGCT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHQPHCS*AGWVNA
Trigger: AGCGTTCACCCAACCTGCGCAGGAGCAGTGCGGCTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCTCTCCAGCCGCACTaGTCCTGCGCAGGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKPLQPH*SCAGWV
Trigger: CACCCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGG...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGTGCTCTGGCCAAGGTaGCCTCTCCAGCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGVLWPR*PLQPHC
Trigger: GCAGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCAC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGGCGGCGACTGTGGTaGTGGCGGCTGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQGRRLW*WRLCSG
Trigger: GCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGACAACCCCACGTGCTaGTGGGAAGGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSDNPTC*WEGWVW
Trigger: CCAGACCCACCCTTCCCAGCAGCACGTGGGGTTGTC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACGGGACAACCCCACGTaGTGCTGGGAAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRDNPT*CWEGWV
Trigger: GACCCACCCTTCCCAGCAGCACGTGGGGTTGTCCCG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCAGGGGGATGAGGGGTaGTCCAGAGGTACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPQGDEG*SRGTAC
Trigger: ACAGGCGGTACCTCTGGAGCACCCCTCATCCCCCTG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCATTCGTCCCTGCCGATaGAGCGGCCTCCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCIRPCR*SGLRSG
Trigger: GCCTGAACGGAGGCCGCTGCATCGGCAGGGACGAAT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCACCAGCATTCGTCCCTaGCGATGCAGCGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCTSIRP*RCSGLR
Trigger: ACGGAGGCCGCTGCATCGGCAGGGACGAATGCTGGT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATACCAGCATTCGTCCCTaGCGATGCAGCGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHTSIRP*RCSGLR
Trigger: ACGGAGGCCGCTGCATCGGCAGGGACGAATGCTGGT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCACACTCCGCGTCCTTaGACAGGCCCAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPHTPRP*TGPGSS
Trigger: GCTTGACCCTGGGCCTGTGCAAGGACGCGGAGTGTG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAGGCCAGGTCTGCATGTaGACAGGTAGCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGGQVCM*TGSCPW
Trigger: CCAGGGGCAGCTACCTGTGCACATGCAGACCTGGCC...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGGCCAGGTCTGCATGTaGACAGGTAGCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHGQVCM*TGSCPW
Trigger: CCAGGGGCAGCTACCTGTGCACATGCAGACCTGGCC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAAAGGCAGGGTGCAGGTaGCGGGCCCCAGCGACCGGT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQKAGCR*RAPATG
Trigger: ACCGGTCGCTGGGGCCCGGCACCTGCACCCTGCCTT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGAGGGGCTGCCTCTCTaGTGGCCCGGGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHEGLPL*WPGQCP
Trigger: GGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCCCTC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATGAGGGGCTGCCTCTCTaGTGGCCCGGGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHEGLPL*WPGQCP
Trigger: GGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCCCTC...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACGACCCGGAGGGGCTaGCTCTCTGCTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTTRRG*LSAGPG
Trigger: GCCCGGGCCAGCAGAGAGGCAGCCCCTCCGGGTCGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGATCGGTGTTGGTGCACTaGCCCCCGCTGCACACCCCT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGSVLVH*PPLHTP
Trigger: AGGGGTGTGCAGCGGGGGGCAGTGCACCAACACCGA...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGCCAGCCGTGTTGGTaGAGACTCCGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHSQPCW*RLRRGR
Trigger: TCTGCCCCTCCGGAGTCTGCACCAACACGGCTGGCT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAGCCAGCCGTGTTGGTaGAGACTCCGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGSQPCW*RLRRGR
Trigger: TCTGCCCCTCCGGAGTCTGCACCAACACGGCTGGCT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCCCCATCGCAGTCCTTaGAGGAGAAGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEPHRSP*RRRSQP
Trigger: CGGCTGGCTCCTTCTCCTGCAAGGACTGCGATGGGG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCCCCATCGCAGTCCTTaGAGGAGAAGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSPHRSP*RRRSQP
Trigger: CGGCTGGCTCCTTCTCCTGCAAGGACTGCGATGGGG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCCCATCGCAGTCCTTaGAGGAGAAGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPHRSP*RRRSQP
Trigger: CGGCTGGCTCCTTCTCCTGCAAGGACTGCGATGGGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGAGGCCATGGGGCCTTaGATGCTCGCACAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEEAMGP*MLAQLG
Trigger: CCCAAGCTGTGCGAGCATGCAAGGCCCCATGGCCTC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCATTGTGGTCGGCACGCTaGACGCCCGCGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPLWSAR*TPAGCS
Trigger: AGAACAGCCCGCGGGCGTCCAGCGTGCCGACCACAA...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACCGCGAAGAGCTTTGTaGTCGGCACGCTGGACGCCC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPPRRAL*SARWTP
Trigger: GGGCGTCCAGCGTGCCGACCACAAAGCTCTTCGCGG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTTGGTCCGCGGCCTCATaGCGCGGGGCGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLWSAAS*RGAAGE
Trigger: CTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCA...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTGGTCCGCGGCCTCATaGCGCGGGGCGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHWSAAS*RGAAGE
Trigger: CTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGGTGCTGGTTGCTGCTaGCCCAGGGGAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCGAGCC*PRGVLL
Trigger: GAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGGTGCTGGTTGCTGCTaGCCCAGGGGAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPGAGCC*PRGVLL
Trigger: GAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAAGCCCCAGACCGCTGTaGGGTCCCCAGGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQSPRPL*GPQAWE
Trigger: CTCCCACGCCTGGGGACCCCACAGCGGTCTGGGGCT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCTGGCGGCTGTGCTCTaGCCAAGGTGCCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCLAAVL*PRCPLQ
Trigger: CTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACTGGCGGCTGTGCTCTaGCCAAGGTGCCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLAAVL*PRCPLQ
Trigger: CTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCGGCGACTGTGGTGCTaGCGGCTGTGCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCRRLWC*RLCSGQ
Trigger: TTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGCTGGCTACTGGCCGTaGCAGTCGGGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPAGYWP*QSGEVG
Trigger: TCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGGCTGTACAGGGTGGTaGTGTCGCCCCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPGCTGW*CRPSHS
Trigger: GCTGTGAGAGGGGCGACACCACCACCCTGTACAGCC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTTGGGATCGTGCCCATaGCCGCCCTGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLGSCP*PPWLYR
Trigger: CCTGTACAGCCAGGGCGGCCATGGGCACGATCCCAA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGCGGGACCCCCTCCCTaGAGGCTCCCTGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHAGPPP*RLPVRL
Trigger: CAGCCGGACAGGGAGCCTCCAGGGAGGGGGTCCCGC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCACCTGGGCCACCTGGTaGATCTGCACTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPTWATW*ICTEAS
Trigger: CGAGGCCTCAGTGCAGATCCACCAGGTGGCCCAGGT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAACCTGGGCCACCTGGTaGATCTGCACTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGTWATW*ICTEAS
Trigger: CGAGGCCTCAGTGCAGATCCACCAGGTGGCCCAGGT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACGCACCTGGGCCACCTaGTGGATCTGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRTWAT*WICTEA
Trigger: GGCCTCAGTGCAGATCCACCAGGTGGCCCAGGTGCG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAGGCCTGGGTGCTGCTaGGGGCAGTGGCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPRPGCC*GQWPRG
Trigger: CCCCCTCGGCCACTGCCCCCAGCAGCACCCAGGCCT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCACAGCGGCTCCGCGATaGATCCAGCATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCTAAPR*IQHEAR
Trigger: CCTGGCCTCATGCTGGATCCATCGCGGAGCCGCTGT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGCCCTTGCTCCCTTaGGGGCCTTGCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLPLLP*GPCQFL
Trigger: GAGGAACTGGCAAGGCCCCCAAGGGAGCAAGGGCAG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCACCCTTGTCAGGGATaGTCCCGGCCTCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCHPCQG*SRPQAR
Trigger: CCTGGCTTGAGGCCGGGACCATCCCTGACAAGGGTG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCAGGGCCACAGACGTTaGTGGCTCCAGCAGCGCATC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCQGHRR*WLQQRI
Trigger: GATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACGGCAGTGCCCCTCCTaGGCATCGTACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRQCPS*ASYSSR
Trigger: CCTGGAGGAGTACGATGCCCAGGAGGGGCACTGCCG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAGCATTCCGTGTAGGTaGTGCGGTGCCCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGSIPCR*CGAHAG
Trigger: CCCTGCGTGGGCACCGCACCACCTACACGGAATGCT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGCATTCCGTGTAGGTaGTGCGGTGCCCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCSIPCR*CGAHAG
Trigger: CCCTGCGTGGGCACCGCACCACCTACACGGAATGCT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCACAGAGCACACTGCTaGCTCCAGGCCTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVHRAHC*LQASPS
Trigger: GGACGGCGAGGCCTGGAGCCAGCAGTGTGCTCTGTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGCCATACTCATAGCCTaGCCGGAAGTGGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCAILIA*PEVDPG
Trigger: GCCGGGGTCCACTTCCGGCCAGGCTATGAGTATGGC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGCCAGGAAAGGTGGTaGACAGGGCCTCATGCGGTG +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLGQERW*TGPHAV
Trigger: CACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCAGCAACACCCACTTTaGCACCGGGAAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHQQHPL*HREASG
Trigger: CCCGCTGGCTTCCCGGTGCCAAAGTGGGTGTTGCTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTGAGTCTAGGGGGCCCTaGAGCGGCCGACTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSESRGP*SGRLGA
Trigger: GGCCCCCAGTCGGCCGCTTCAGGGCCCCCTAGACTC...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGCCTCGGGTGGGTGGTaGATGTGCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVASGGW*MCTFTR
Trigger: CCTGGTGAAGGTGCACATTCACCACCCACCCGAGGC...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTGGTGGATCTGCACTaGGGCCTCGGGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVLVDLH*GLGWVV
Trigger: CACCACCCACCCGAGGCCTCAGTGCAGATCCACCAG...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGCGATGGATCCAGCATaGGGCCAGGTCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCAMDPA*GQVCMC
Trigger: GCACATGCAGACCTGGCCTCATGCTGGATCCATCGC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCAGGGCAGATCTCTCTaGAGGCCTCTGTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEQGRSL*RPLCQA
Trigger: TGCCTGGCACAGAGGCCTTCAGAGAGATCTGCCCTG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAGGACCCCACGCGGTTaGTGCAGCGCCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRTPRG*CSALFP
Trigger: AGGGAAAAGGGCGCTGCATCAACCGCGTGGGGTCCT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGGAGCCAGGGGAATTaGCGCATCTCCCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRSQGN*RISHQG
Trigger: GCCCTGATGGGAGATGCGTCAATTCCCCTGGCTCCT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGAGGCCTGTGGGGCATaGGGCCCGGCTGGCACACTC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHEACGA*GPAGTL
Trigger: GAGTGTGCCAGCCGGGCCTCATGCCCCACAGGCCTC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCACACAGTCCCAGCCTaGGGGAGAGATCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHHTVPA*GRDLEA
Trigger: GGCTTCGAGATCTCTCCCTCAGGCTGGGACTGTGTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGAGGAGCCCTCCGTGTTaGCGCACTCGCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGERSPPC*RTRHSH
Trigger: GTGAGAATGGCGAGTGCGTCAACACGGAGGGCTCCT...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGGGTGTGCGGTCCGCTaGGTGACCGGCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGGCAVR*VTGCVG
Trigger: CCCAACACAGCCGGTCACTCAGCGGACCGCACACCC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGGGGTGTGCGGTCCGCTaGGTGACCGGCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQGCAVR*VTGCVG
Trigger: CCCAACACAGCCGGTCACTCAGCGGACCGCACACCC...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGTGGGGCTGGAGTTCTaGGGGCTGCAAAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEVGLEF*GLQRRL
Trigger: GAGTCTCCTTTGCAGCCCTCAGAACTCCAGCCCCAC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCAAGGCCCCTGCCTGTaGCTGGAGGCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVQGPCL*LEAISR
Trigger: CCTGGAAATGGCCTCCAGTCACAGGCAGGGGCCTTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACAAGGCCCCTGCCTGTaGCTGGAGGCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPQGPCL*LEAISR
Trigger: CCTGGAAATGGCCTCCAGTCACAGGCAGGGGCCTTG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACTTGGCTGCAGCCGCTaGCGGGTAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSLGCSR*RVAAPR
Trigger: CCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAG...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCGACAGGCGCGTCCTaGTCCCGGAACAGACTGTAC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGATGAS*SRNRLY
Trigger: GTACAGTCTGTTCCGGGAGCAGGACGCGCCTGTCGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCAGCGTCGAGGTaGCAGCCTGGAGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQGPASR*QPGVLG
Trigger: CCCCAGAACTCCAGGCTGGCACCTCGACGCTGGGCC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCAGCCGCACTGCTCCTaGGCAGGTTGGGTGAACGCT +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCQPHCS*AGWVNA
Trigger: AGCGTTCACCCAACCTGCGCAGGAGCAGTGCGGCTG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACAGCCGCACTGCTCCTaGGCAGGTTGGGTGAACGCT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGQPHCS*AGWVNA
Trigger: AGCGTTCACCCAACCTGCGCAGGAGCAGTGCGGCTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGACAACCCCACGTGCTaGTGGGAAGGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCDNPTC*WEGWVW
Trigger: CCAGACCCACCCTTCCCAGCAGCACGTGGGGTTGTC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGGTGAAGTCGGACAGTaGGGGACAACCCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCGEVGQ*GTTPRA
Trigger: AGCACGTGGGGTTGTCCCGCACTGTCCGACTTCACC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCAGGGGGATGAGGGGTaGTCCAGAGGTACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVQGDEG*SRGTAC
Trigger: ACAGGCGGTACCTCTGGAGCACCCCTCATCCCCCTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCCACGGGCACAGGTCTaGTTGCAGATGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSPRAQV*LQMVGV
Trigger: CACTCCCACCATCTGCAAGCAGACCTGTGCCCGTGG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCACGGGCACAGGTCTaGTTGCAGATGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPRAQV*LQMVGV
Trigger: CACTCCCACCATCTGCAAGCAGACCTGTGCCCGTGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAATTCGTCCCTGCCGATaGAGCGGCCTCCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGIRPCR*SGLRSG
Trigger: GCCTGAACGGAGGCCGCTGCATCGGCAGGGACGAAT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTCGAGGCCTGGGTGCTaGTGGGGGCAGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSRPGC*WGQWPR
Trigger: CCTCGGCCACTGCCCCCAGCAGCACCCAGGCCTCGA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGAAGGCTCCCACACTaGCACAGCAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRRLPH*HSSPPG
Trigger: CCCAGGAGGACTGCTGTGGCAGTGTGGGAGCCTTCT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACACACTCCGCGTCCTTaGACAGGCCCAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGHTPRP*TGPGSS
Trigger: GCTTGACCCTGGGCCTGTGCAAGGACGCGGAGTGTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAAGGCAGGGTGCAGGTaGCGGGCCCCAGCGACCGGT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHKAGCR*RAPATG
Trigger: ACCGGTCGCTGGGGCCCGGCACCTGCACCCTGCCTT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAAGGCAGGGTGCAGGTaGCGGGCCCCAGCGACCGGT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPKAGCR*RAPATG
Trigger: ACCGGTCGCTGGGGCCCGGCACCTGCACCCTGCCTT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCACACTCGCTGCCCCATaGTTTGCCCACGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCTLAAP*FAHAAA
Trigger: TGCAGCCGCGTGGGCAAAGCATGGGGCAGCGAGTGT...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAACACTCGCTGCCCCATaGTTTGCCCACGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGTLAAP*FAHAAA
Trigger: TGCAGCCGCGTGGGCAAAGCATGGGGCAGCGAGTGT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGCCCCGCTGCTCCTCTaGCCTTGCTCCCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPAPLLL*PCSLGG
Trigger: GCCCCCAAGGGAGCAAGGGCAGAGGAGCAGCGGGGC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAGCCAGCCGTGTTGGTaGAGACTCCGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGSQPCW*RLRRGR
Trigger: TCTGCCCCTCCGGAGTCTGCACCAACACGGCTGGCT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGCCTCAGCCACATATCCCGGGGAGCAGTGGCAGCGGTAGGAGCCCTCTGTGTTACTCGTCTATGTCAATaGAGTCTCCGTTCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLSHISRGAVAAVGALCVTRLCQ*SLRSGP
Trigger: TGGCCCCGAACGGAGACTGCATTGACATAGACGAGT...AACACAGAGGGCTCCTACCGCTGCCACTGCTCCCCGGGATATGTGGCTGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTTCATGCAGCGCTaGTGGCTGAGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLFMQR*WLRSRV
Trigger: CACCCTGGACCTCAGCCAGCAGCGCTGCATGAACAG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGGAGGTCCTCCGTGCTaGTGGTGCTGTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHGGPPC*WCCSCS
Trigger: GCTGCATGAACAGCACCAGCAGCACGGAGGACCTCC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATATTCCGTGTAGGTGGTaGGGTGCCCACGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHIPCRW*GAHAGV
Trigger: AACCCCTGCGTGGGCACCGCACCACCTACACGGAAT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAACTCAAGGATGGGTGTaGGGTCCGCTGAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGTQGWV*GPLSDR
Trigger: CCGGTCACTCAGCGGACCGCACACCCATCCTTGAGT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCACTCAAGGATGGGTGTaGGGTCCGCTGAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPTQGWV*GPLSDR
Trigger: CCGGTCACTCAGCGGACCGCACACCCATCCTTGAGT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACTGGAAAGGGGTGTCTaGAGTGTGAGGCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGLERGV*SVRPWG
Trigger: GCCCCATGGCCTCACACTGCAGACACCCCTTTCCAG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTCCGCGAAGAGCTTTGTaGTCGGCACGCTGGACGCCC +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSPRRAL*SARWTP
Trigger: GGGCGTCCAGCGTGCCGACCACAAAGCTCTTCGCGG...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGACAGACTGTACACCTTaGCTGCAGCCGCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGETDCTP*LQPLPG
Trigger: ACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGT...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCACAGACTGTACACCTTaGCTGCAGCCGCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPTDCTP*LQPLPG
Trigger: ACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCCGGGTCTGCGCAGGTaGCTGGACACGCCGCGACTG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPPGLRR*LDTPRL
Trigger: CAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGGTGCTGGTTGCTGCTaGCCCAGGGGAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGGAGCC*PRGVLL
Trigger: GAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATAGCCCCAGACCGCTGTaGGGTCCCCAGGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHSPRPL*GPQAWE
Trigger: CTCCCACGCCTGGGGACCCCACAGCGGTCTGGGGCT...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCAGGGTCCCAGCTGGTaGCGACTGTGGTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHQGPSW*RLWCGR
Trigger: CCGCCCGCACCACAGTCGCCACCAGCTGGGACCCTG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGTGGGAAGGGTGGGTCTaGCTGAGGCCACTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVWEGWV*LRPLRV
Trigger: GACCCTGAGTGGCCTCAGCCAGACCCACCCTTCCCA...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGCGTTGGAAGAGAGCTaGCTACTGGCCGTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCALEES*LLAVAV
Trigger: GACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTTCTCTGCTCAAGGCCTaGTCCCGGGGGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVSLLKA*SRGQGV
Trigger: AACGCCCTGCCCCCGGGACCAGGCCTTGAGCAGAGA...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCCTCTCACAGCTGTTaGCACAGTGTCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPSHSC*HSVHGH
Trigger: GTGCCCGTGGACACTGTGCCAACAGCTGTGAGAGGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCCCTCTCACAGCTGTTaGCACAGTGTCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSPSHSC*HSVHGH
Trigger: GTGCCCGTGGACACTGTGCCAACAGCTGTGAGAGGG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCATTGGGATCGTGCCCATaGCCGCCCTGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPLGSCP*PPWLYR
Trigger: CCTGTACAGCCAGGGCGGCCATGGGCACGATCCCAA...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCACTTCCCGGTGGAGTTaGCGGGGCACCAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPTSRWS*RGTSIR
Trigger: ACGAATGCTGGTGCCCCGCCAACTCCACCGGGAAGT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCTTCCAGCAAGGCCCTaGGGCGGGACCCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPLPARP*GGTPSL
Trigger: CAGGGAGGGGGTCCCGCCCCAGGGCCTTGCTGGAAG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTTCACGGAGGCCAGCTaGTTGGAGAGCGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHFTEAS*LESGSV
Trigger: CACACTGCCGCTCTCCAACCAGCTGGCCTCCGTGAA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTGGTCTGGGTGGGCATaGGGCACACAAAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCWSGWA*GTQSHP
Trigger: GGGGTGACTTTGTGTGCCCCATGCCCACCCAGACCA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCTCGGCTTTCCTCATaGACAGGCGGATGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPRLSS*TGGCRS
Trigger: GCTCCGACATCCGCCTGTCCATGAGGAAAGCCGAGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGGCCACAGACGTTGGTaGCTCCAGCAGCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCGHRRW*LQQRIC
Trigger: ACAGATGCGCTGCTGGAGCCACCAACGTCTGTGGCC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCAGGGCCACAGACGTTaGTGGCTCCAGCAGCGCATC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVQGHRR*WLQQRI
Trigger: GATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGTCACCCAGGGGGCTaGGCCGGTAGCCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSHPGG*AGSPHR
Trigger: GCGATGGGGGCTACCGGCCCAGCCCCCTGGGTGACT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCGTGGCTGCCACACATaGTGTCGTTGGCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSRGCHT*CRWRTR
Trigger: ACGAGTGCGCCAACGACACCATGTGTGGCAGCCACG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCGTGGCTGCCACACATaGTGTCGTTGGCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRGCHT*CRWRTR
Trigger: ACGAGTGCGCCAACGACACCATGTGTGGCAGCCACG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTTCATGCAGCGCTGCTaGCTGAGGTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHFMQRC*LRSRVS
Trigger: GCTCACCCTGGACCTCAGCCAGCAGCGCTGCATGAA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTTCATGCAGCGCTGCTaGCTGAGGTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSFMQRC*LRSRVS
Trigger: GCTCACCCTGGACCTCAGCCAGCAGCGCTGCATGAA...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTCTACGCAGGCCATGTaGGCCGCATCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHSTQAM*AASSWK
Trigger: CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACCCTTCGAAGCCGGCTaGGGGCTCCTGCTGGCAATA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGPFEAG*GLLLAI
Trigger: TATTGCCAGCAGGAGCCCCCAGCCGGCTTCGAAGGG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAATTCCTCATCGGGAATaGCCTCCTCGCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPIPHRE*PPRSGL
Trigger: GAGCCCGCTGCGAGGAGGTCATTCCCGATGAGGAAT...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGCCGTGGCAGTCGGGTaGAGTCGGACAGTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPAVAVG*SRTVRD
Trigger: GTCCCGCACTGTCCGACTTCACCCGACTGCCACGGC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGCGATGGATCCAGCATaGGGCCAGGTCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPAMDPA*GQVCMC
Trigger: GCACATGCAGACCTGGCCTCATGCTGGATCCATCGC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACAGGGCAGATCTCTCTaGAGGCCTCTGTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGQGRSL*RPLCQA
Trigger: TGCCTGGCACAGAGGCCTTCAGAGAGATCTGCCCTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGATTGTGGCATTCCCTGTaGCCCAGGCAGGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGLWHSL*PRQVHE
Trigger: CTCATGCACCTGCCTGGGTCACAGGGAATGCCACAA...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTTGTGGCATTCCCTGTaGCCCAGGCAGGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHLWHSL*PRQVHE
Trigger: CTCATGCACCTGCCTGGGTCACAGGGAATGCCACAA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAGGGCAGGTACCGGGGTaGCGGCATTCGTTGATATCT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGGQVPG*RHSLIS
Trigger: AGATATCAACGAATGCCGTCACCCCGGTACCTGCCC...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGGGCAGGTACCGGGGTaGCGGCATTCGTTGATATCT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHGQVPG*RHSLIS
Trigger: AGATATCAACGAATGCCGTCACCCCGGTACCTGCCC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATCCTTCTCATCTGAGGTaGCCTCATAGCCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHPSHLR*PHSPAH
Trigger: GTGAGCAGGGCTATGAGGTCACCTCAGATGAGAAGG...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGCAGCCCTTCTCATCTaGGGTGACCTCATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPAALLI*GDLIAL
Trigger: CAGGGCTATGAGGTCACCTCAGATGAGAAGGGCTGC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACACACAGTCCCAGCCTaGGGGAGAGATCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGHTVPA*GRDLEA
Trigger: GGCTTCGAGATCTCTCCCTCAGGCTGGGACTGTGTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAACCAGGCACGGTGTTaGGGCACCGGCCGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPNQARC*GTGRSG
Trigger: GCCCGAACGGCCGGTGCCTCAACACCGTGCCTGGTT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAAGGAGCCCTCCGTGTTaGCGCACTCGCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPRSPPC*RTRHSH
Trigger: GTGAGAATGGCGAGTGCGTCAACACGGAGGGCTCCT...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGGGTGTGCGGTCCGCTaGGTGACCGGCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPGCAVR*VTGCVG
Trigger: CCCAACACAGCCGGTCACTCAGCGGACCGCACACCC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGTGGGGCTGGAGTTCTaGGGGCTGCAAAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVVGLEF*GLQRRL
Trigger: GAGTCTCCTTTGCAGCCCTCAGAACTCCAGCCCCAC...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGTGGGGCTGGAGTTCTaGGGGCTGCAAAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGVGLEF*GLQRRL
Trigger: GAGTCTCCTTTGCAGCCCTCAGAACTCCAGCCCCAC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAGCGATTGGTGGTGCTTaGGCCAAGCAAGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGAIGGA*AKQGHG
Trigger: TCCATGCCCTTGCTTGGCTCAAGCACCACCAATCGC...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTTGGCTGAGTGGTGGTaGTGGTTCTTAGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLAEWW*WFLGGG
Trigger: GCCCCCTCCTAAGAACCATCACCACCACTCAGCCAA...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGACTGTACACCTTGGCTaGAGCCGCTGCCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKTVHLG*SRCRVA
Trigger: AGCTACCCGGCAGCGGCTGCAGCCAAGGTGTACAGT...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGCGGGGTGCTGGTTGCTaGTGGCCCAGGGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGRGAGC*WPRGVL
Trigger: AAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCG...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACCTCTCCAGCCGCACTaGTCCTGCGCAGGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQPLQPH*SCAGWV
Trigger: CACCCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGGTGAAGTCGGACAGTaGGGGACAACCCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGGEVGQ*GTTPRA
Trigger: AGCACGTGGGGTTGTCCCGCACTGTCCGACTTCACC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACCACGGGCACAGGTCTaGTTGCAGATGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGPRAQV*LQMVGV
Trigger: CACTCCCACCATCTGCAAGCAGACCTGTGCCCGTGG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGGCTCCCTGTCCGGCTaGGGGATAGGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHGSLSG*GIGRWQ
Trigger: CTGCCACCTGCCTATCCCGCAGCCGGACAGGGAGCC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGAGCAGGGATGTTGTTaGTGTCCCAGAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSEQGCC*CPRGCG
Trigger: GCCACAGCCTCTGGGACAGCAACAACATCCCTGCTC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAAGAAGGCTCCCACACTaGCACAGCAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPRRLPH*HSSPPG
Trigger: CCCAGGAGGACTGCTGTGGCAGTGTGGGAGCCTTCT...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTTTGCCCACGCGGCTaGAGCAGCATATCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLCPRG*SSISAW
Trigger: CCAAGCAGATATGCTGCTGCAGCCGCGTGGGCAAAG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCAGCGCATCTGTCAATaGCTGGGGTGCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHQRICQ*LGCSGS
Trigger: TGACCCTGAGCACCCCAGGCATTGACAGATGCGCTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGCGCCCTTTTCCCTTaGAGGGGTCCCTCAGACACT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCSALFP*RGPSDT
Trigger: AGTGTCTGAGGGACCCCTGCAAGGGAAAAGGGCGCT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACGCCTCCCAGGCAGCTaGTCTGGGGGTCTTCACATT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRLPGS*SGGLHI
Trigger: AATGTGAAGACCCCCAGAGCAGCTGCCTGGGAGGCG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGAGCCCACAGTGTTCTTaGACTCGCCTCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVSPQCS*TRLPGS
Trigger: GCTGCCTGGGAGGCGAGTGCAAGAACACTGTGGGCT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGAGCCCACAGTGTTCTTaGACTCGCCTCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKSPQCS*TRLPGS
Trigger: GCTGCCTGGGAGGCGAGTGCAAGAACACTGTGGGCT...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGCACTCGCCGTGGGGTaGGCAGTGCTCCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHALAVG*AVLLPH
Trigger: ATGGGGGAGGAGCACTGCGCACCCCACGGCGAGTGC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTCGGTGTTGACACAGTaGCCTCCCACACACGGGTCT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPSVLTQ*PPTHGS
Trigger: AGACCCGTGTGTGGGAGGGCACTGTGTCAACACCGA...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCTGTTCATGCAGCGCTaGTGGCTGAGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCLFMQR*WLRSRV
Trigger: CACCCTGGACCTCAGCCAGCAGCGCTGCATGAACAG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACTGTTCATGCAGCGCTaGTGGCTGAGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLFMQR*WLRSRV
Trigger: CACCCTGGACCTCAGCCAGCAGCGCTGCATGAACAG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGAGGTCCTCCGTGCTaGTGGTGCTGTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCGGPPC*WCCSCS
Trigger: GCTGCATGAACAGCACCAGCAGCACGGAGGACCTCC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGACTCAAGGATGGGTGTaGGGTCCGCTGAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVTQGWV*GPLSDR
Trigger: CCGGTCACTCAGCGGACCGCACACCCATCCTTGAGT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATGTCTGCGCAGGTGGCTaGACACGCCGCGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHVCAGG*TRRDCC
Trigger: GCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGAC...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGTCTGCGCAGGTGGCTaGACACGCCGCGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPVCAGG*TRRDCC
Trigger: GCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGAC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGCTGGTGGCGACTGTaGTGCGGGCGGCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSWWRL*CGRRLW
Trigger: CCACAGTCGCCGCCCGCACCACAGTCGCCACCAGCT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAAGAGAGCTGGCTACTaGCCGTGGCAGTCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHKRAGY*PWQSGE
Trigger: TTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCAAGAGAGCTGGCTACTaGCCGTGGCAGTCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPKRAGY*PWQSGE
Trigger: TTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGCGTTGGAAGAGAGCTaGCTACTGGCCGTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVALEES*LLAVAV
Trigger: GACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGC...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGGCGTTGGAAGAGAGCTaGCTACTGGCCGTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKALEES*LLAVAV
Trigger: GACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGC...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATAGAGGTACCGCCTGTTaGGTGCCATCTCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHRGTAC*VPSLCS
Trigger: TGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCT...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAGTGGACTGCTTCAGTaGGGCTTCCAGCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGSGLLQ*GFQQGP
Trigger: AGGGCCTTGCTGGAAGCCCCACTGAAGCAGTCCACT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGTGGACTGCTTCAGTaGGGCTTCCAGCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCSGLLQ*GFQQGP
Trigger: AGGGCCTTGCTGGAAGCCCCACTGAAGCAGTCCACT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCTTCACGGAGGCCAGCTaGTTGGAGAGCGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCFTEAS*LESGSV
Trigger: CACACTGCCGCTCTCCAACCAGCTGGCCTCCGTGAA...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACGCACCTGGGCCACCTaGTGGATCTGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQRTWAT*WICTEA
Trigger: GGCCTCAGTGCAGATCCACCAGGTGGCCCAGGTGCG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCACAGCAGTCCTCCTaGGTAGTCAGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPQQSS*VVSSSR
Trigger: TCTGCTGGAGCTGACTACCCAGGAGGACTGCTGTGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGTGGTCTGGGTGGGCATaGGGCACACAAAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKWSGWA*GTQSHP
Trigger: GGGGTGACTTTGTGTGCCCCATGCCCACCCAGACCA...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACCTCGGCTTTCCTCATaGACAGGCGGATGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPPRLSS*TGGCRS
Trigger: GCTCCGACATCCGCCTGTCCATGAGGAAAGCCGAGG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGCATCTGTCAATGCCTaGGGTGCTCAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHASVNA*GAQGHQ
Trigger: CTGGTGACCCTGAGCACCCCAGGCATTGACAGATGC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGCATCTGTCAATGCCTaGGGTGCTCAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPASVNA*GAQGHQ
Trigger: CTGGTGACCCTGAGCACCCCAGGCATTGACAGATGC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGCCACAGACGTTGGTaGCTCCAGCAGCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCGHRRW*LQQRIC
Trigger: ACAGATGCGCTGCTGGAGCCACCAACGTCTGTGGCC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGGCCACAGACGTTGGTaGCTCCAGCAGCGCATCTGT +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPGHRRW*LQQRIC
Trigger: ACAGATGCGCTGCTGGAGCCACCAACGTCTGTGGCC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTTGGTGCACTTTCCATaGGCACAGACCCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHLVHFP*AQTPGV
Trigger: GACTCCCGGGGTCTGTGCCCATGGAAAGTGCACCAA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGGCATGAGGCCCGGCTaGCACACTCATCCACATCTT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHGMRPG*HTHPHL
Trigger: AAGATGTGGATGAGTGTGCCAGCCGGGCCTCATGCC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCCCAGGCAGCTGCTCTaGGGGTCTTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHPRQLL*GSSHSS
Trigger: GGATGAATGTGAAGACCCCCAGAGCAGCTGCCTGGG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCCCAGGCAGCTGCTCTaGGGGTCTTCACATTCATCC +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSPRQLL*GSSHSS
Trigger: GGATGAATGTGAAGACCCCCAGAGCAGCTGCCTGGG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCAGAAGAAAGACCCGTaGCTGTTGAGGCACTCGCCG +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLQKKDP*LLRHSP
Trigger: CGGCGAGTGCCTCAACAGCCACGGGTCTTTCTTCTG...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCACACACGGGTCTGTaGTGGCACACTCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPHTGL*WHTRPH
Trigger: ATGTGGACGAGTGTGCCACCACAGACCCGTGTGTGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACCACACACGGGTCTGTaGTGGCACACTCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGPHTGL*WHTRPH
Trigger: ATGTGGACGAGTGTGCCACCACAGACCCGTGTGTGG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCACACACGGGTCTGTaGTGGCACACTCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPHTGL*WHTRPH
Trigger: ATGTGGACGAGTGTGCCACCACAGACCCGTGTGTGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTTGTCACAGAAGCCGTaGCTGCCACACATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHLSQKP*LPHMVS
Trigger: CGACACCATGTGTGGCAGCCACGGCTTCTGTGACAA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGAGATCTCGAAGCCCTaGTCACAGAGGCAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLEISKP*SQRQRK
Trigger: CTTCCGCTGCCTCTGTGACCAGGGCTTCGAGATCTC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGAGATCTCGAAGCCCTaGTCACAGAGGCAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPEISKP*SQRQRK
Trigger: CTTCCGCTGCCTCTGTGACCAGGGCTTCGAGATCTC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGGCATGGTCCCCCGTTaGGGCCTCAGACATACTCTG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGGMVPR*GLRHTL
Trigger: CAGAGTATGTCTGAGGCCCCAACGGGGGACCATGCC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTAGCAGTCCATGCGGGTaGGGGCCGGGGCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSSSPCG*GPGHGP
Trigger: GGGACCATGCCCCGGCCCCCACCCGCATGGACTGCT...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCAGCATTCAGCCTGTGTaGTGTTCCGGCCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPSIQPV*CSGPGH
Trigger: GTGTCCTGGGCCGGAACACCACACAGGCTGAATGCT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGTCCATGTGGATGTCGTaGTCAGGGAGGTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGESMWMS*SGRSSV
Trigger: CACGGAGGACCTCCCTGACCACGACATCCACATGGA...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTAGCATTCCGTGTAGGTaGTGCGGTGCCCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSSIPCR*CGAHAG
Trigger: CCCTGCGTGGGCACCGCACCACCTACACGGAATGCT...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGAAGGGGGCCCCATCTaGGCCATAGATGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPEGGPI*AIDAVV
Trigger: CACTACAGCATCTATGGCCCAGATGGGGCCCCCTTC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGCCGGCTGGGGGCTCTaGATGGCTGGCCACGTAGTG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHAGWGL*MAGHVV
Trigger: CACTACGTGGCCAGCCATCCAGAGCCCCCAGCCGGC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACAAGGCCAGGAAAGGTaGTGGACAGGGCCTCATGCG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGQGQER*WTGPHA
Trigger: CGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGTGCAGTGTGAGGCCATaGGGCCTTGCATGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVCSVRP*GLACSH
Trigger: GTGCGAGCATGCAAGGCCCCATGGCCTCACACTGCA...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
3UTR CAA 72 bp GTCTTTGTAGATGGGTGCTGTATCCCATGGCAGCCCTaGCTGCTGGTGCCCACAGGCTATCACTGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: VFVDGCCIPWQP*LLVPTGYHWAD
Trigger: ATCCGCCCAGTGATAGCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGATACAGCACCCATCTACAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGAGACGTTCCTCCCCGTaGGCCGCCCTCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKRRSSP*AALAAG
Trigger: CCCCGCCGCGAGGGCGGCTCACGGGGAGGAACGTCT...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTATTCCTCATCGGGAATaGCCTCCTCGCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVIPHRE*PPRSGL
Trigger: GAGCCCGCTGCGAGGAGGTCATTCCCGATGAGGAAT...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGCCTCGGGTGGGTGGTaGATGTGCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQASGGW*MCTFTR
Trigger: CCTGGTGAAGGTGCACATTCACCACCCACCCGAGGC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACTGGTGGATCTGCACTaGGGCCTCGGGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSLVDLH*GLGWVV
Trigger: CACCACCCACCCGAGGCCTCAGTGCAGATCCACCAG...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGCATATCTGCTTGGTaGTCCGCTGGGCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHSISAW*SAGPKA
Trigger: TGCCTTTGGCCCAGCGGATCACCAAGCAGATATGCT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTCCTGTGTCGCCCCTaGGGTGGCCAGAGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHLLCRP*GGQSVA
Trigger: GGCTACACTCTGGCCACCTCAGGGGCGACACAGGAG...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGGCAGGTACCGGGGTaGCGGCATTCGTTGATATCT +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCGQVPG*RHSLIS
Trigger: AGATATCAACGAATGCCGTCACCCCGGTACCTGCCC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGGCAGCCCTTCTCATCTaGGGTGACCTCATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKAALLI*GDLIAL
Trigger: CAGGGCTATGAGGTCACCTCAGATGAGAAGGGCTGC...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGAAAGCAGGCAAGGCTaGTTGGAAACCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEESRQG*LETSGL
Trigger: CAGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGAAAGCAGGCAAGGCTaGTTGGAAACCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCESRQG*LETSGL
Trigger: CAGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGTGGGATCGTCAGGATaGTGGTGGATTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSVGSSG*WWIVAG
Trigger: TCCAGCCACAATCCACCATCATCCTGACGATCCCAC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTCAGCCTTGCTTCTCTaGGTGAAGGGATCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHSALLL*VKGSSA
Trigger: GGCAGAAGATCCCTTCACTCAGAGAAGCAAGGCTGA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATCTCCTGCTGGCAATATaGCTAGCAGGTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHLLLAI*LAGGGD
Trigger: ATCTCCTCCACCTGCTAGTCATATTGCCAGCAGGAG...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGTGCTTCTCCGGGTCTaGGCAGGTGGCTGGACACGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPVLLRV*AGGWTR
Trigger: GCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCAC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGTGCTTCTCCGGGTCTaGGCAGGTGGCTGGACACGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHVLLRV*AGGWTR
Trigger: GCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCAC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACCAGACTTGGGATCGTaGCCATGGCCGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSPDLGS*PWPPWL
Trigger: CAGCCAGGGCGGCCATGGGCACGATCCCAAGTCTGG...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCAGACTTGGGATCGTaGCCATGGCCGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHPDLGS*PWPPWL
Trigger: CAGCCAGGGCGGCCATGGGCACGATCCCAAGTCTGG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAATTCGTCCCTGCCGATaGAGCGGCCTCCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQIRPCR*SGLRSG
Trigger: GCCTGAACGGAGGCCGCTGCATCGGCAGGGACGAAT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGACCAGCATTCGTCCCTaGCGATGCAGCGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQTSIRP*RCSGLR
Trigger: ACGGAGGCCGCTGCATCGGCAGGGACGAATGCTGGT...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTGGCTCCCTGTCCGGCTaGGGGATAGGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSGSLSG*GIGRWQ
Trigger: CTGCCACCTGCCTATCCCGCAGCCGGACAGGGAGCC...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGAGCAGGGATGTTGTTaGTGTCCCAGAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCEQGCC*CPRGCG
Trigger: GCCACAGCCTCTGGGACAGCAACAACATCCCTGCTC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGCAGCATGGAGATTaGCTTGTCCGACACACAGCG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLQHGD*LVRHTA
Trigger: CGCTGTGTGTCGGACAAGGCAATCTCCATGCTGCAG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACTGCAGCAGCATATCTaGTTGGTGATCCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLQQHI*LVIRWA
Trigger: GGCCCAGCGGATCACCAAGCAGATATGCTGCTGCAG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACTTTGCCCACGCGGCTaGAGCAGCATATCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPLCPRG*SSISAW
Trigger: CCAAGCAGATATGCTGCTGCAGCCGCGTGGGCAAAG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACTTTGCCCACGCGGCTaGAGCAGCATATCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLCPRG*SSISAW
Trigger: CCAAGCAGATATGCTGCTGCAGCCGCGTGGGCAAAG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTCTCCCTTGGGGGCCTTaGCAGTTCCTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGLPWGP*QFLLLG
Trigger: GCCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAG...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACTGCTCCTCTGCCCTTaGTCCCTTGGGGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSLLLCP*SLGGLA
Trigger: GGCAAGGCCCCCAAGGGAGCAAGGGCAGAGGAGCAG...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTGTGACCCAGGCAGGTaGATGAGTGACACTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHCDPGR*MSDTGR
Trigger: ACGACCAGTGTCACTCATGCACCTGCCTGGGTCACA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCAGCGCATCTGTCAATaGCTGGGGTGCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCQRICQ*LGCSGS
Trigger: TGACCCTGAGCACCCCAGGCATTGACAGATGCGCTG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATACTCGTTGTCATCTGTaGAGTAGGCCTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHTRCHL*SRPGWG
Trigger: ACCCCAGCCAGGCCTACTGCACAGATGACAACGAGT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAGCGCCCTTTTCCCTTaGAGGGGTCCCTCAGACACT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGSALFP*RGPSDT
Trigger: AGTGTCTGAGGGACCCCTGCAAGGGAAAAGGGCGCT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACATCCTCACACACGGTaGCATTGGCCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGHPHTR*HWPAGS
Trigger: GCTTCCAGCTGGCCAATGGCACCGTGTGTGAGGATG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCCGTGGGGTGCGCAGTaGTCCTCCCCCATGCACTCA +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPPWGAQ*SSPMHS
Trigger: TGAGTGCATGGGGGAGGAGCACTGCGCACCCCACGG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCTCGGTGTTGACACAGTaGCCTCCCACACACGGGTCT +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCSVLTQ*PPTHGS
Trigger: AGACCCGTGTGTGGGAGGGCACTGTGTCAACACCGA...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGTCGGTGTTGACACAGTaGCCTCCCACACACGGGTCT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVSVLTQ*PPTHGS
Trigger: AGACCCGTGTGTGGGAGGGCACTGTGTCAACACCGA...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACACAGAAGCCGTGGCTaGCACACATGGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGHRSRG*HTWCRW
Trigger: CCAACGACACCATGTGTGGCAGCCACGGCTTCTGTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTCCTCCGTGCTGCTGGTaGTGTTCATGCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSPPCCW*CSCSAA
Trigger: AGCAGCGCTGCATGAACAGCACCAGCAGCACGGAGG...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTGGAGGTCCTCCGTGCTaGTGGTGCTGTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVGGPPC*WCCSCS
Trigger: GCTGCATGAACAGCACCAGCAGCACGGAGGACCTCC...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATCAATGCGAGCCACGTTaGACAGCTGAGCATAGACCT +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHQCEPR*TAEHRP
Trigger: AGGTCTATGCTCAGCTGTGCAACGTGGCTCGCATTG...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCCCGCTCTGCCTCAATaGGAGCCACGTTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVPALPQ*EPRCTA
Trigger: AGCTGTGCAACGTGGCTCGCATTGAGGCAGAGCGGG...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATACACTGACCCCTGACTaGTACTCCTTGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHTLTPD*YSLAVQ
Trigger: CTGCACTGCCAAGGAGTAGCAGTCAGGGGTCAGTGT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTTTGTGGTCGGCACGCTaGACGCCCGCGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPLWSAR*TPAGCS
Trigger: AGAACAGCCCGCGGGCGTCCAGCGTGCCGACCACAA...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCGCGAAGAGCTTTGTaGTCGGCACGCTGGACGCCC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHPRRAL*SARWTP
Trigger: GGGCGTCCAGCGTGCCGACCACAAAGCTCTTCGCGG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCGGCGACTGTGGTGCTaGCGGCTGTGCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPRRLWC*RLCSGQ
Trigger: TTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACTCAGGGTCCCAGCTaGTGGCGACTGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTQGPS*WRLWCG
Trigger: CCCGCACCACAGTCGCCACCAGCTGGGACCCTGAGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATTCTCTGCTCAAGGCCTaGTCCCGGGGGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHSLLKA*SRGQGV
Trigger: AACGCCCTGCCCCCGGGACCAGGCCTTGAGCAGAGA...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTCTCTGCTCAAGGCCTaGTCCCGGGGGCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSLLKA*SRGQGV
Trigger: AACGCCCTGCCCCCGGGACCAGGCCTTGAGCAGAGA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTTGCCCATGGCCGCCCTaGCTGTACAGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPCPWPP*LYRVVV
Trigger: CACCACCACCCTGTACAGCCAGGGCGGCCATGGGCA...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGGCAGAACTTCCCGGTaGAGTTGGCGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHGRTSR*SWRGTS
Trigger: GCTGGTGCCCCGCCAACTCCACCGGGAAGTTCTGCC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGAGTGGACTGCTTCAGTaGGGCTTCCAGCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVSGLLQ*GFQQGP
Trigger: AGGGCCTTGCTGGAAGCCCCACTGAAGCAGTCCACT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCGCACCTGGGCCACCTaGTGGATCTGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPRTWAT*WICTEA
Trigger: GGCCTCAGTGCAGATCCACCAGGTGGCCCAGGTGCG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGCCAGGGCGGGGGTCTaGTCTCCACGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPARAGV*SPRCSP
Trigger: TGGAGAACAGCGTGGAGACCAGACCCCCGCCCTGGC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCCACAGCAGTCCTCCTaGGTAGTCAGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVPQQSS*VVSSSR
Trigger: TCTGCTGGAGCTGACTACCCAGGAGGACTGCTGTGG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCACAGGTAGCTGCCCCTaGTATTCACACACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCTGSCP*YSHTPR
Trigger: ACGCGGAGTGTGTGAATACCAGGGGCAGCTACCTGT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGACAGGTAGCTGCCCCTaGTATTCACACACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLTGSCP*YSHTPR
Trigger: ACGCGGAGTGTGTGAATACCAGGGGCAGCTACCTGT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATACAGTCCCTGCAGCATaGAGATTGCCTTGTCCGACA +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHTVPAA*RLPCPT
Trigger: TGTCGGACAAGGCAATCTCCATGCTGCAGGGACTGT...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTCCTCGGCTTTCCTCATaGACAGGCGGATGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSPRLSS*TGGCRS
Trigger: GCTCCGACATCCGCCTGTCCATGAGGAAAGCCGAGG...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACACCCTTGTCAGGGATaGTCCCGGCCTCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQHPCQG*SRPQAR
Trigger: CCTGGCTTGAGGCCGGGACCATCCCTGACAAGGGTG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACAGGGCCACAGACGTTaGTGGCTCCAGCAGCGCATC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQQGHRR*WLQQRI
Trigger: GATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTTGAGGCACTCGCCGTaGGGTGCGCAGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHLRHSP*GAQCSS
Trigger: GGAGGAGCACTGCGCACCCCACGGCGAGTGCCTCAA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCAGAAGAAAGACCCGTaGCTGTTGAGGCACTCGCCG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVQKKDP*LLRHSP
Trigger: CGGCGAGTGCCTCAACAGCCACGGGTCTTTCTTCTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCACACGGGTCTGTGGTaGCACACTCGTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVHTGLW*HTRPHP
Trigger: AGGATGTGGACGAGTGTGCCACCACAGACCCGTGTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTCTCTGGGGAGGGCTaGAAGCCAGTCTCACATAGA +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLSGEG*KPVSHR
Trigger: TCTATGTGAGACTGGCTTCCAGCCCTCCCCAGAGAG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTTGTCACAGAAGCCGTaGCTGCCACACATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLSQKP*LPHMVS
Trigger: CGACACCATGTGTGGCAGCCACGGCTTCTGTGACAA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCGGCAGTGCCCCTCCTaGGCATCGTACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPRQCPS*ASYSSR
Trigger: CCTGGAGGAGTACGATGCCCAGGAGGGGCACTGCCG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGAGCATTCAGCCTGTGTaGTGTTCCGGCCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVSIQPV*CSGPGH
Trigger: GTGTCCTGGGCCGGAACACCACACAGGCTGAATGCT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCCCAGCTAGCGCCCTaGGTGCAGCAGCATTCAGCC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHPQLAP*VQQHSA
Trigger: GGCTGAATGCTGCTGCACCCAGGGCGCTAGCTGGGG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCAGCAGATGTCCATGTaGATGTCGTGGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCQQMSM*MSWSGR
Trigger: CCTCCCTGACCACGACATCCACATGGACATCTGCTG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACAGCAGATGTCCATGTaGATGTCGTGGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGQQMSM*MSWSGR
Trigger: CCTCCCTGACCACGACATCCACATGGACATCTGCTG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCAGCAGATGTCCATGTaGATGTCGTGGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHQQMSM*MSWSGR
Trigger: CCTCCCTGACCACGACATCCACATGGACATCTGCTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTCACAGAGCACACTGCTaGCTCCAGGCCTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLHRAHC*LQASPS
Trigger: GGACGGCGAGGCCTGGAGCCAGCAGTGTGCTCTGTG...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGAAGGGGGCCCCATCTaGGCCATAGATGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPEGGPI*AIDAVV
Trigger: CACTACAGCATCTATGGCCCAGATGGGGCCCCCTTC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTAGTGACCGGCTGTGTTaGGGAAGGCAGGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSSDRLC*GRQAQG
Trigger: TCCCTGAGCCTGCCTTCCCCAACACAGCCGGTCACT...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAAGGAGACTCAAGGATaGGTGTGCGGTCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGKETQG*VCGPLS
Trigger: ACTCAGCGGACCGCACACCCATCCTTGAGTCTCCTT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTGGGGCTCTGGATGGCTaGCCACGTAGTGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGGALDG*PRSGAG
Trigger: TCCAGCCCCACTACGTGGCCAGCCATCCAGAGCCCC...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGGGGCTCTGGATGGCTaGCCACGTAGTGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPGALDG*PRSGAG
Trigger: TCCAGCCCCACTACGTGGCCAGCCATCCAGAGCCCC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000556690.5
CDS-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTTCTACGCAGGCCATGTaGGCCGCATCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSSTQAM*AASSWK
Trigger: CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGA...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCAAGGCCAGGAAAGGTaGTGGACAGGGCCTCATGCG +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVQGQER*WTGPHA
Trigger: CGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTG...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTGGCTATCAGCAGAGCTaGCCAGGGAGTAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVGYQQS*PGSRHS
Trigger: GCTGTGCCTACTCCCTGGCCAGCTCTGCTGATAGCC...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGTGTTGTGGGGGCAGTaGGAACAGCAGTTACGAAGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPVLWGQ*EQQLRR
Trigger: CCTTCGTAACTGCTGTTCCCACTGCCCCCACAACAC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGCAGCAACACAGACCTaGATGGCTGGCCACGTAGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCAATQT*MAGHVV
Trigger: CACTACGTGGCCAGCCATCCAGGTCTGTGTTGCTGC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
3UTR CAA 72 bp CTGTCCCAGTTGTGGGATCGTCAGGATGATGGTGGATaGTGGCTGGAAAGGGGTGTCTGCAGTGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LSQLWDRQDDGG*WLERGVCSVRP
Trigger: TGGCCTCACACTGCAGACACCCCTTTCCAGCCACAATCCACCATCATCCTGACGATCCCACAACTGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGCTCGCAAACGGGTTTaGTACAGTGGTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPARKRV*YSGWCC
Trigger: ACAGCACCAACCACTGTATCAAACCCGTTTGCGAGC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAATTCCTCATCGGGAATaGCCTCCTCGCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQIPHRE*PPRSGL
Trigger: GAGCCCGCTGCGAGGAGGTCATTCCCGATGAGGAAT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGTGGAGAGCGGCAGTGTaGAAGTGGACTGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKWRAAV*KWTASV
Trigger: CACTGAAGCAGTCCACTTTCACACTGCCGCTCTCCA...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGCGATGGATCCAGCATaGGGCCAGGTCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGAMDPA*GQVCMC
Trigger: GCACATGCAGACCTGGCCTCATGCTGGATCCATCGC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGTGACCTGGCCAGCCTaGGAGTCACCCTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHVTWPA*ESPLSG
Trigger: CCCTGACAAGGGTGACTCTCAGGCTGGCCAGGTCAC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGACCCAGGCAGGTGCATaGGTGACACTGGTCGTGACC +
Preference number: 4 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQTQAGA*VTLVVT
Trigger: GGTCACGACCAGTGTCACTCATGCACCTGCCTGGGT...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGGACCCCACGCGGTTaGTGCAGCGCCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHRTPRG*CSALFP
Trigger: AGGGAAAAGGGCGCTGCATCAACCGCGTGGGGTCCT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACCTTCTCATCTGAGGTaGCCTCATAGCCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPPSHLR*PHSPAH
Trigger: GTGAGCAGGGCTATGAGGTCACCTCAGATGAGAAGG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCTGGAAACCTCTGGCCTaGTGTCACGGTGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCWKPLA*CHGVFP
Trigger: TGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCA...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGAGGGCATGGAGGCAATaGCCGAAGCTTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKRAWRQ*PKLTAR
Trigger: TCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCT...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGCCTCATGCGGTGGCTaGAGCATTAAAGCGATTGGT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCASCGG*SIKAIG
Trigger: ACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGATTGCTCCACAGATTCTaGAGGACCTCCCTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLLHRF*RTSLGQ
Trigger: CTGCCCTAGGGAGGTCCTTCAGAATCTGTGGAGCAA...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGACAACCCCACGTGCTaGTGGGAAGGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHDNPTC*WEGWVW
Trigger: CCAGACCCACCCTTCCCAGCAGCACGTGGGGTTGTC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCAGGGGGATGAGGGGTaGTCCAGAGGTACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHQGDEG*SRGTAC
Trigger: ACAGGCGGTACCTCTGGAGCACCCCTCATCCCCCTG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCACACTCCGCGTCCTTaGACAGGCCCAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHHTPRP*TGPGSS
Trigger: GCTTGACCCTGGGCCTGTGCAAGGACGCGGAGTGTG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGTGTGACCCAGGCAGGTaGATGAGTGACACTGGTCGT +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKCDPGR*MSDTGR
Trigger: ACGACCAGTGTCACTCATGCACCTGCCTGGGTCACA...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGCTGGTAGCCAGGGCTaGAGACACATCTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLAGSQG*RHICIH
Trigger: ATGGATACAGATGTGTCTGCAGCCCTGGCTACCAGC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCACTCGTTGTCATCTGTaGAGTAGGCCTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCTRCHL*SRPGWG
Trigger: ACCCCAGCCAGGCCTACTGCACAGATGACAACGAGT...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGACTCGTTGTCATCTGTaGAGTAGGCCTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVTRCHL*SRPGWG
Trigger: ACCCCAGCCAGGCCTACTGCACAGATGACAACGAGT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTAGCGCCCTTTTCCCTTaGAGGGGTCCCTCAGACACT +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSSALFP*RGPSDT
Trigger: AGTGTCTGAGGGACCCCTGCAAGGGAAAAGGGCGCT...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAGGTCTTCACAGGCAGTaGCGTCTTCATTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGGLHRQ*RLHSPS
Trigger: ACTGGGTGAATGAAGACGGCACTGCCTGTGAAGACC...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGGTCTTCACAGGCAGTaGCGTCTTCATTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSGLHRQ*RLHSPS
Trigger: ACTGGGTGAATGAAGACGGCACTGCCTGTGAAGACC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGGTCTTCACAGGCAGTaGCGTCTTCATTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHGLHRQ*RLHSPS
Trigger: ACTGGGTGAATGAAGACGGCACTGCCTGTGAAGACC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACGCCTCCCAGGCAGCTaGTCTGGGGGTCTTCACATT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQRLPGS*SGGLHI
Trigger: AATGTGAAGACCCCCAGAGCAGCTGCCTGGGAGGCG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTCCGTGGGGTGCGCAGTaGTCCTCCCCCATGCACTCA +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSPWGAQ*SSPMHS
Trigger: TGAGTGCATGGGGGAGGAGCACTGCGCACCCCACGG...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGTGGAAGCCGGGATTaGACAGGCAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHSGSRD*TGRHNQ
Trigger: CTGGTTATGTCTGCCTGTGCAATCCCGGCTTCCACT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACCTCCGTGCTGCTGGTaGTGTTCATGCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQPPCCW*CSCSAA
Trigger: AGCAGCGCTGCATGAACAGCACCAGCAGCACGGAGG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACAATGCGAGCCACGTTaGACAGCTGAGCATAGACCT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGQCEPR*TAEHRP
Trigger: AGGTCTATGCTCAGCTGTGCAACGTGGCTCGCATTG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACCCGCTCTGCCTCAATaGGAGCCACGTTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQPALPQ*EPRCTA
Trigger: AGCTGTGCAACGTGGCTCGCATTGAGGCAGAGCGGG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCACACTGACCCCTGACTaGTACTCCTTGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCTLTPD*YSLAVQ
Trigger: CTGCACTGCCAAGGAGTAGCAGTCAGGGGTCAGTGT...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCCATGGGGCCTTGCATaGTCGCACAGCTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHPWGLA*SHSLGG
Trigger: CCCTCCCAAGCTGTGCGAGCATGCAAGGCCCCATGG...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTTCCCATGGCAGCCCTTaGTGCTGGTGCCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLSHGSP*CWCPQA
Trigger: AGCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGA...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGTCGAGGTGCCAGCCTaGAGTTCTGGGGGTCAAATT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVVEVPA*SSGGQI
Trigger: AATTTGACCCCCAGAACTCCAGGCTGGCACCTCGAC...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTGGGAAGGGTGGGTCTaGCTGAGGCCACTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHWEGWV*LRPLRV
Trigger: GACCCTGAGTGGCCTCAGCCAGACCCACCCTTCCCA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCATGCTGCTGGGAAGGGTaGGTCTGGCTGAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSCCWEG*VWLRPL
Trigger: GAGTGGCCTCAGCCAGACCCACCCTTCCCAGCAGCA...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTTGCTGCTGGGAAGGGTaGGTCTGGCTGAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPCCWEG*VWLRPL
Trigger: GAGTGGCCTCAGCCAGACCCACCCTTCCCAGCAGCA...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGCTGGCTACTGGCCGTaGCAGTCGGGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHAGYWP*QSGEVG
Trigger: TCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAGAGGTACCGCCTGTTaGGTGCCATCTCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRGTAC*VPSLCS
Trigger: TGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAGGCTGTACAGGGTGGTaGTGTCGCCCCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSGCTGW*CRPSHS
Trigger: GCTGTGAGAGGGGCGACACCACCACCCTGTACAGCC...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTCCTGGCTGTACAGGGTaGTGGTGTCGCCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLPGCTG*WCRPSH
Trigger: GTGAGAGGGGCGACACCACCACCCTGTACAGCCAGG...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCCTGGCTGTACAGGGTaGTGGTGTCGCCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPPGCTG*WCRPSH
Trigger: GTGAGAGGGGCGACACCACCACCCTGTACAGCCAGG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTTTGGGATCGTGCCCATaGCCGCCCTGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPLGSCP*PPWLYR
Trigger: CCTGTACAGCCAGGGCGGCCATGGGCACGATCCCAA...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAACTTCCCGGTGGAGTTaGCGGGGCACCAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQTSRWS*RGTSIR
Trigger: ACGAATGCTGGTGCCCCGCCAACTCCACCGGGAAGT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAATTCACGGAGGCCAGCTaGTTGGAGAGCGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQFTEAS*LESGSV
Trigger: CACACTGCCGCTCTCCAACCAGCTGGCCTCCGTGAA...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACCTGGGCCACCTGGTaGATCTGCACTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTWATW*ICTEAS
Trigger: CGAGGCCTCAGTGCAGATCCACCAGGTGGCCCAGGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCCACAGCAGTCCTCCTaGGTAGTCAGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVPQQSS*VVSSSR
Trigger: TCTGCTGGAGCTGACTACCCAGGAGGACTGCTGTGG...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACAGCGGCTCCGCGATaGATCCAGCATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTAAPR*IQHEAR
Trigger: CCTGGCCTCATGCTGGATCCATCGCGGAGCCGCTGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAACAGTCCCTGCAGCATaGAGATTGCCTTGTCCGACA +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGTVPAA*RLPCPT
Trigger: TGTCGGACAAGGCAATCTCCATGCTGCAGGGACTGT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCTGCCCTTGCTCCCTTaGGGGCCTTGCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPLPLLP*GPCQFL
Trigger: GAGGAACTGGCAAGGCCCCCAAGGGAGCAAGGGCAG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTCACCAGCACATCAGTaGAGGGGGTCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHSPAHQ*RGSLVL
Trigger: AAGAACAAGTGACCCCCTCCACTGATGTGCTGGTGA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGGAGCCTTCTAGGTTaGTGCACTTTCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHRSLLG*CTFHGH
Trigger: GTGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCAGGAGCCTTCTAGGTTaGTGCACTTTCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPRSLLG*CTFHGH
Trigger: GTGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACTCTCTGGGGAGGGCTaGAAGCCAGTCTCACATAGA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLSGEG*KPVSHR
Trigger: TCTATGTGAGACTGGCTTCCAGCCCTCCCCAGAGAG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGGCATGGTCCCCCGTTaGGGCCTCAGACATACTCTG +
Preference number: 4 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGGMVPR*GLRHTL
Trigger: CAGAGTATGTCTGAGGCCCCAACGGGGGACCATGCC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACCGCATCTGTGTACATaGTCTGTCCAAACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGPHLCT*SVQTSR
Trigger: CCTGGACGTTTGGACAGACCATGTACACAGATGCGG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCGCATCTGTGTACATaGTCTGTCCAAACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPHLCT*SVQTSR
Trigger: CCTGGACGTTTGGACAGACCATGTACACAGATGCGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGTCCTCCGTGCTGCTaGTGCTGTTCATGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQGPPCC*CCSCSA
Trigger: AGCGCTGCATGAACAGCACCAGCAGCACGGAGGACC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTGCCATACTCATAGCCTaGCCGGAAGTGGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGAILIA*PEVDPG
Trigger: GCCGGGGTCCACTTCCGGCCAGGCTATGAGTATGGC...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGCCATACTCATAGCCTaGCCGGAAGTGGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPAILIA*PEVDPG
Trigger: GCCGGGGTCCACTTCCGGCCAGGCTATGAGTATGGC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGATGATGGTGGATTGTaGCTGGAAAGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLDDGGL*LERGVC
Trigger: GCAGACACCCCTTTCCAGCCACAATCCACCATCATC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCCTCTGTCCCAGTTGTaGGATCGTCAGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHPLSQL*DRQDDG
Trigger: ACCATCATCCTGACGATCCCACAACTGGGACAGAGG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCCTCTGTCCCAGTTGTaGGATCGTCAGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEPLSQL*DRQDDG
Trigger: ACCATCATCCTGACGATCCCACAACTGGGACAGAGG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGAGATTGGAGTGTTGTaGGGGCAGTGGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVEIGVL*GQWEQQ
Trigger: CTGCTGTTCCCACTGCCCCCACAACACTCCAATCTC...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCACACATGGTGTCGTTaGCGCACTCGTCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPHTWCR*RTRLCP
Trigger: TGGACATAGACGAGTGCGCCAACGACACCATGTGTG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAACAGACCTGGATGGCTaGCCACGTAGTGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQTDLDG*PRSGAG
Trigger: TCCAGCCCCACTACGTGGCCAGCCATCCAGGTCTGT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTTGGAGAGCGGCAGTGTaGAAGTGGACTGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVWRAAV*KWTASV
Trigger: CACTGAAGCAGTCCACTTTCACACTGCCGCTCTCCA...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAGGGCAGATCTCTCTaGAGGCCTCTGTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPQGRSL*RPLCQA
Trigger: TGCCTGGCACAGAGGCCTTCAGAGAGATCTGCCCTG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTACCCAGGCAGGTGCATaGGTGACACTGGTCGTGACC +
Preference number: 4 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGTQAGA*VTLVVT
Trigger: GGTCACGACCAGTGTCACTCATGCACCTGCCTGGGT...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACCCAGGCAGGTGCATaGGTGACACTGGTCGTGACC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTQAGA*VTLVVT
Trigger: GGTCACGACCAGTGTCACTCATGCACCTGCCTGGGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCACTCATTGATATCTTaGCACTCCTGTGTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCHSLIS*HSCVAP
Trigger: AGGGGCGACACAGGAGTGTCAAGATATCAATGAGTG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAGGAGCCAGGGGAATTaGCGCATCTCCCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPRSQGN*RISHQG
Trigger: GCCCTGATGGGAGATGCGTCAATTCCCCTGGCTCCT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGCTCACAAGAGCATCTaGAGGAGCCTTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPAHKSI*RSLLGW
Trigger: CCAACCTAGAAGGCTCCTTCAGATGCTCTTGTGAGC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCTCACAAGAGCATCTaGAGGAGCCTTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGAHKSI*RSLLGW
Trigger: CCAACCTAGAAGGCTCCTTCAGATGCTCTTGTGAGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAGGAGCCCTCCGTGTTaGCGCACTCGCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPRSPPC*RTRHSH
Trigger: GTGAGAATGGCGAGTGCGTCAACACGGAGGGCTCCT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCTAAGCTGGGAGAGATaGAAGCAGGCAAGGCTGATT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHLSWER*KQARLI
Trigger: AATCAGCCTTGCCTGCTTTCATCTCTCCCAGCTTAG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGGCCTCATGCGGTGGCTaGAGCATTAAAGCGATTGGT +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKASCGG*SIKAIG
Trigger: ACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGC...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACTGTACACCTTGGCTaGAGCCGCTGCCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTVHLG*SRCRVA
Trigger: AGCTACCCGGCAGCGGCTGCAGCCAAGGTGTACAGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGTGGTTGGTGCTGTTTaGTGTTGTCCATCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGVVGAV*CCPSWA
Trigger: TGCCCAGGATGGACAACAGCAAACAGCACCAACCAC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGAGTGTGAAAGTGGACTaGTTCAGTGGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKSVKVD*FSGASS
Trigger: GCTGGAAGCCCCACTGAAGCAGTCCACTTTCACACT...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGAGCAGGGATGTTGTTaGTGTCCCAGAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQEQGCC*CPRGCG
Trigger: GCCACAGCCTCTGGGACAGCAACAACATCCCTGCTC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCGAGGCCTGGGTGCTaGTGGGGGCAGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKSRPGC*WGQWPR
Trigger: CCTCGGCCACTGCCCCCAGCAGCACCCAGGCCTCGA...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAAGAAGGCTCCCACACTaGCACAGCAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSRRLPH*HSSPPG
Trigger: CCCAGGAGGACTGCTGTGGCAGTGTGGGAGCCTTCT...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATATGTGCACAGGTAGCTaGCCCTGGTATTCACACACT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHMCTGS*PWYSHT
Trigger: AGTGTGTGAATACCAGGGGCAGCTACCTGTGCACAT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTGGCCAGGTCTGCATGTaGACAGGTAGCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSGQVCM*TGSCPW
Trigger: CCAGGGGCAGCTACCTGTGCACATGCAGACCTGGCC...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTTGTGACCCAGGCAGGTaGATGAGTGACACTGGTCGT +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSCDPGR*MSDTGR
Trigger: ACGACCAGTGTCACTCATGCACCTGCCTGGGTCACA...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCTGGTAGCCAGGGCTaGAGACACATCTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGAGSQG*RHICIH
Trigger: ATGGATACAGATGTGTCTGCAGCCCTGGCTACCAGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACTGCACACCCCTGGCTaGTCACACTCATTGATATCT +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGLHTPG*SHSLIS
Trigger: AGATATCAATGAGTGTGAGCAGCCAGGGGTGTGCAG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCTGCACACCCCTGGCTaGTCACACTCATTGATATCT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLHTPG*SHSLIS
Trigger: AGATATCAATGAGTGTGAGCAGCCAGGGGTGTGCAG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGCCTTCTAGGTTGGTaGACTTTCCATGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCSLLGW*TFHGHR
Trigger: TCTGTGCCCATGGAAAGTGCACCAACCTAGAAGGCT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAGCCCACAGTGTTCTTaGACTCGCCTCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPSPQCS*TRLPGS
Trigger: GCTGCCTGGGAGGCGAGTGCAAGAACACTGTGGGCT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAAGTGCTCCTCCCCCATaGACTCATTCACATCCTCAC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPSAPPP*THSHPH
Trigger: GTGAGGATGTGAATGAGTGCATGGGGGAGGAGCACT...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGTTTCACACTTCCAGGTaGCACACACCGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKFHTSR*HTPGLH
Trigger: ATGGAGACCCGGTGTGTGGCACCTGGAAGTGTGAAA...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAGTGGAAGCCGGGATTaGACAGGCAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGSGSRD*TGRHNQ
Trigger: CTGGTTATGTCTGCCTGTGCAATCCCGGCTTCCACT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACAGGGAGGTCCTCCGTaGTGCTGGTGCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSQGGPP*CWCCSC
Trigger: GCATGAACAGCACCAGCAGCACGGAGGACCTCCCTG...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCAGGGAGGTCCTCCGTaGTGCTGGTGCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHQGGPP*CWCCSC
Trigger: GCATGAACAGCACCAGCAGCACGGAGGACCTCCCTG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTATTCCGTGTAGGTGGTaGGGTGCCCACGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPIPCRW*GAHAGV
Trigger: AACCCCTGCGTGGGCACCGCACCACCTACACGGAAT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACAATGCGAGCCACGTTaGACAGCTGAGCATAGACCT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGQCEPR*TAEHRP
Trigger: AGGTCTATGCTCAGCTGTGCAACGTGGCTCGCATTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCCCGCTCTGCCTCAATaGGAGCCACGTTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPPALPQ*EPRCTA
Trigger: AGCTGTGCAACGTGGCTCGCATTGAGGCAGAGCGGG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCATCTGGGCCATAGATaGTGTAGTGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVHLGHR*CSAGHR
Trigger: CCGATGACCTGCACTACAGCATCTATGGCCCAGATG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTGGAGTTCTGAGGGCTaGAAAGGAGACTCAAGGATG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCWSSEG*KGDSRM
Trigger: CATCCTTGAGTCTCCTTTGCAGCCCTCAGAACTCCA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATACAGACTGTACACCTTaGCTGCAGCCGCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHTDCTP*LQPLPG
Trigger: ACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGT...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCCTCTCACAGCTGTTaGCACAGTGTCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHPSHSC*HSVHGH
Trigger: GTGCCCGTGGACACTGTGCCAACAGCTGTGAGAGGG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACTTCCCGGTGGAGTTaGCGGGGCACCAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTSRWS*RGTSIR
Trigger: ACGAATGCTGGTGCCCCGCCAACTCCACCGGGAAGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTTGGTCTGGGTGGGCATaGGGCACACAAAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPWSGWA*GTQSHP
Trigger: GGGGTGACTTTGTGTGCCCCATGCCCACCCAGACCA...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTCTGCCCTTGCTCCCTTaGGGGCCTTGCCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSLPLLP*GPCQFL
Trigger: GAGGAACTGGCAAGGCCCCCAAGGGAGCAAGGGCAG...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCACTCATCCACATCTTaGCAGCCCTTCTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPHSSTS*QPFSSE
Trigger: CTCAGATGAGAAGGGCTGCCAAGATGTGGATGAGTG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAAGCATTCAGCCTGTGTaGTGTTCCGGCCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQSIQPV*CSGPGH
Trigger: GTGTCCTGGGCCGGAACACCACACAGGCTGAATGCT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTTCATGCAGCGCTGCTaGCTGAGGTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHFMQRC*LRSRVS
Trigger: GCTCACCCTGGACCTCAGCCAGCAGCGCTGCATGAA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGGTCCTCCGTGCTGCTaGTGCTGTTCATGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLGPPCC*CCSCSA
Trigger: AGCGCTGCATGAACAGCACCAGCAGCACGGAGGACC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAGGTCCTCCGTGCTGCTaGTGCTGTTCATGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSGPPCC*CCSCSA
Trigger: AGCGCTGCATGAACAGCACCAGCAGCACGGAGGACC...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAATCCATGTGGATGTCGTaGTCAGGGAGGTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQSMWMS*SGRSSV
Trigger: CACGGAGGACCTCCCTGACCACGACATCCACATGGA...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAGTGACCGGCTGTGTTaGGGAAGGCAGGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPSDRLC*GRQAQG
Trigger: TCCCTGAGCCTGCCTTCCCCAACACAGCCGGTCACT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGTGACCGGCTGTGTTaGGGAAGGCAGGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSDRLC*GRQAQG
Trigger: TCCCTGAGCCTGCCTTCCCCAACACAGCCGGTCACT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCTGATTGGAAACCTCTaGCCTGATGTCACGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPLIGNL*PDVTVS
Trigger: AGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGATGGTGGATTGTGGCTaGAAAGGGGTGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVMVDCG*KGVSAV
Trigger: CACTGCAGACACCCCTTTCCAGCCACAATCCACCAT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGATGATGGTGGATTGTaGCTGGAAAGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FGKHPIARPGKVVDRASCDDGGL*LERGVC
Trigger: GCAGACACCCCTTTCCAGCCACAATCCACCATCATC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGAATGGGCTACAGGATaGAGGTGTGGCAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCEWATG*RCGKIR
Trigger: CCTGATTTTGCCACACCTCCATCCTGTAGCCCATTC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAGGTTGGCAGGAAGGTaGAGATTGGAGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGRLAGR*RLECCG
Trigger: CCCACAACACTCCAATCTCCACCTTCCTGCCAACCT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAATGGAGAGCGGCAGTGTaGAAGTGGACTGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQWRAAV*KWTASV
Trigger: CACTGAAGCAGTCCACTTTCACACTGCCGCTCTCCA...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGTATCTTGGCAGTGAGTaGGGTTCAGTCTCTTGTACC +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLYLGSE*GSVSCT
Trigger: GGTACAAGAGACTGAACCTCACTCACTGCCAAGATA...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGAGCATATCTGCTTGGTaGTCCGCTGGGCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQSISAW*SAGPKA
Trigger: TGCCTTTGGCCCAGCGGATCACCAAGCAGATATGCT...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTTGTGGCATTCCCTGTaGCCCAGGCAGGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHLWHSL*PRQVHE
Trigger: CTCATGCACCTGCCTGGGTCACAGGGAATGCCACAA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACACTCATTGATATCTTaGCACTCCTGTGTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPHSLIS*HSCVAP
Trigger: AGGGGCGACACAGGAGTGTCAAGATATCAATGAGTG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACTAAGCTGGGAGAGATaGAAGCAGGCAAGGCTGATT +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPLSWER*KQARLI
Trigger: AATCAGCCTTGCCTGCTTTCATCTCTCCCAGCTTAG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAAGGGCATGGAGGCAATaGCCGAAGCTTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQRAWRQ*PKLTAR
Trigger: TCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGTGGGATCGTCAGGATaGTGGTGGATTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQVGSSG*WWIVAG
Trigger: TCCAGCCACAATCCACCATCATCCTGACGATCCCAC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTGTGGCAAGGATGAGGTaGACAGACAACCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVVARMR*TDNRFS
Trigger: AGAGAAGCGGTTGTCTGTTCACCTCATCCTTGCCAC...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCACTTGGCTGCAGCCGCTaGCGGGTAGCTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSLGCSR*RVAAPR
Trigger: CCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAG...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGTACCGCCTGTTGGGTaGCATCTCTCTGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPVPPVG*HLSAQG
Trigger: GCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTAC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTCTGGCAGAAATAGATaGGGAAGCCAGACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSSGRNR*GSQTWD
Trigger: ATCCCAAGTCTGGCTTCCGCATCTATTTCTGCCAGA...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTCTGGCAGAAATAGATaGGGAAGCCAGACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCSGRNR*GSQTWD
Trigger: ATCCCAAGTCTGGCTTCCGCATCTATTTCTGCCAGA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACTGCAGCATGGAGATTaGCTTGTCCGACACACAGCG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQLQHGD*LVRHTA
Trigger: CGCTGTGTGTCGGACAAGGCAATCTCCATGCTGCAG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCTGCAGCAGCATATCTaGTTGGTGATCCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHLQQHI*LVIRWA
Trigger: GGCCCAGCGGATCACCAAGCAGATATGCTGCTGCAG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAATTTCTCACACTCGCTaGCCCATGCTTTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQISHTR*PMLCPR
Trigger: GCGTGGGCAAAGCATGGGGCAGCGAGTGTGAGAAAT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCCTCATTCTTCCTGTATCTCTaGAATCCCCTGTTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HSFTSTQAMWAASSWKPSFFLYL*NPLFRH
Trigger: ATGCCTGAACAGGGGATTGCAGAGATACAGGAAGAA...TGAGGGCTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCAGCGCATCTGTCAATaGCTGGGGTGCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHQRICQ*LGCSGS
Trigger: TGACCCTGAGCACCCCAGGCATTGACAGATGCGCTG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACTGCACACCCCTGGCTaGTCACACTCATTGATATCT +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPLHTPG*SHSLIS
Trigger: AGATATCAATGAGTGTGAGCAGCCAGGGGTGTGCAG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCATCCTCACACACGGTaGCATTGGCCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPHPHTR*HWPAGS
Trigger: GCTTCCAGCTGGCCAATGGCACCGTGTGTGAGGATG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTCACAGAAGCCGTGGCTaGCACACATGGTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGHRSRG*HTWCRW
Trigger: CCAACGACACCATGTGTGGCAGCCACGGCTTCTGTG...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGTGGAGTTCTGAGGGCTaGAAAGGAGACTCAAGGATG +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKWSSEG*KGDSRM
Trigger: CATCCTTGAGTCTCCTTTGCAGCCCTCAGAACTCCA...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAAAGAGAGCTGGCTACTaGCCGTGGCAGTCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSKRAGY*PWQSGE
Trigger: TTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTT...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGCTCCAGCAGAGGGTTaGCACACTGTCCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLAPAEG*HTVRSQ
Trigger: CTGTGAACGGACAGTGTGCCAACCCTCTGCTGGAGC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATGCTCCAGCAGAGGGTTaGCACACTGTCCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHAPAEG*HTVRSQ
Trigger: CTGTGAACGGACAGTGTGCCAACCCTCTGCTGGAGC...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGCTCCAGCAGAGGGTTaGCACACTGTCCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPAPAEG*HTVRSQ
Trigger: CTGTGAACGGACAGTGTGCCAACCCTCTGCTGGAGC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAACAGGTAGCTGCCCCTaGTATTCACACACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQTGSCP*YSHTPR
Trigger: ACGCGGAGTGTGTGAATACCAGGGGCAGCTACCTGT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGATCACCAGCACATCAGTaGAGGGGGTCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGSPAHQ*RGSLVL
Trigger: AAGAACAAGTGACCCCCTCCACTGATGTGCTGGTGA...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTTGGTGCACTTTCCATaGGCACAGACCCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHLVHFP*AQTPGV
Trigger: GACTCCCGGGGTCTGTGCCCATGGAAAGTGCACCAA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGGCATGAGGCCCGGCTaGCACACTCATCCACATCTT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHGMRPG*HTHPHL
Trigger: AAGATGTGGATGAGTGTGCCAGCCGGGCCTCATGCC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAGAAGAAAGACCCGTaGCTGTTGAGGCACTCGCCG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPQKKDP*LLRHSP
Trigger: CGGCGAGTGCCTCAACAGCCACGGGTCTTTCTTCTG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCACACGGGTCTGTGGTaGCACACTCGTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHHTGLW*HTRPHP
Trigger: AGGATGTGGACGAGTGTGCCACCACAGACCCGTGTG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGTTGTCACAGAAGCCGTaGCTGCCACACATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGLSQKP*LPHMVS
Trigger: CGACACCATGTGTGGCAGCCACGGCTTCTGTGACAA...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGAGATCTCGAAGCCCTaGTCACAGAGGCAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHEISKP*SQRQRK
Trigger: CTTCCGCTGCCTCTGTGACCAGGGCTTCGAGATCTC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTGGGTGCTGTATCCCATaGCAGCCCTTGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSGCCIP*QPLLLV
Trigger: CACCAGCAGCAAGGGCTGCCATGGGATACAGCACCC...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAGAGGTCTTTGTAGATaGGTGCTGTATCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHRGLCR*VLYPMA
Trigger: TGCCATGGGATACAGCACCCATCTACAAAGACCTCT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCAGCTAGTTTGGGTTaGAGTGAGTCTCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPASLG*SESLLV
Trigger: TACAAGCAGAGACTCACTCCAACCCAAACTAGCTGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAAACTCCCAGCTAGTTTaGGTTGGAGTGAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPNSQLV*VGVSLC
Trigger: GCAGAGACTCACTCCAACCCAAACTAGCTGGGAGTT...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTTGATATCTTGGCAGTaGGTGAGGTTCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLISWQ*VRFSLL
Trigger: CAAGAGACTGAACCTCACTCACTGCCAAGATATCAA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCTGCTCACACTCATTaGTATCTTGACACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGAAHTH*YLDTPV
Trigger: CACAGGAGTGTCAAGATATCAATGAGTGTGAGCAGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTTCTCATCTGAGGTaGCCTCATAGCCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHPSHLR*PHSPAH
Trigger: GTGAGCAGGGCTATGAGGTCACCTCAGATGAGAAGG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTTGGAAACCTCTGGCCTaGTGTCACGGTGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPWKPLA*CHGVFP
Trigger: TGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCA...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGAAAGCAGGCAAGGCTaGTTGGAAACCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLESRQG*LETSGL
Trigger: CAGGCCAGAGGTTTCCAATCAGCCTTGCCTGCTTTC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTAAGCTGGGAGAGATaGAAGCAGGCAAGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVLSWER*KQARLI
Trigger: AATCAGCCTTGCCTGCTTTCATCTCTCCCAGCTTAG...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTGCGATTGGTGGTGCTTaGGCCAAGCAAGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSAIGGA*AKQGHG
Trigger: TCCATGCCCTTGCTTGGCTCAAGCACCACCAATCGC...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATATTTCTCACACTCGCTaGCCCATGCTTTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHISHTR*PMLCPR
Trigger: GCGTGGGCAAAGCATGGGGCAGCGAGTGTGAGAAAT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTATTTCTCACACTCGCTaGCCCATGCTTTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPISHTR*PMLCPR
Trigger: GCGTGGGCAAAGCATGGGGCAGCGAGTGTGAGAAAT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTTCTTCCTGTATCTCTaGAATCCCCTGTTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPFFLYL*NPLFRH
Trigger: ATGCCTGAACAGGGGATTGCAGAGATACAGGAAGAA...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAAGTGCTCCTCCCCCATaGACTCATTCACATCCTCAC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQSAPPP*THSHPH
Trigger: GTGAGGATGTGAATGAGTGCATGGGGGAGGAGCACT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGTTTCACACTTCCAGGTaGCACACACCGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGFHTSR*HTPGLH
Trigger: ATGGAGACCCGGTGTGTGGCACCTGGAAGTGTGAAA...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGCATCTGGGCCATAGATaGTGTAGTGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQHLGHR*CSAGHR
Trigger: CCGATGACCTGCACTACAGCATCTATGGCCCAGATG...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACATCTGGGCCATAGATaGTGTAGTGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQHLGHR*CSAGHR
Trigger: CCGATGACCTGCACTACAGCATCTATGGCCCAGATG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGTCTTTGTAGATGGGTaGTGTATCCCATGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGVFVDG*CIPWQP
Trigger: GGGCTGCCATGGGATACAGCACCCATCTACAAAGAC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAACTCAGAGGAATGCCTaGCATCGTTTTCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGTQRNA*HRFLKG
Trigger: TCCCTTCAGAAAACGATGGCAGGCATTCCTCTGAGT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATACGGGTTTGATACAGTaGTTGGTGCTGTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHTGLIQ*LVLFAV
Trigger: AACAGCAAACAGCACCAACCACTGTATCAAACCCGT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGTCGAGGTGCCAGCCTaGAGTTCTGGGGGTCAAATT +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLVEVPA*SSGGQI
Trigger: AATTTGACCCCCAGAACTCCAGGCTGGCACCTCGAC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGTCGAGGTGCCAGCCTaGAGTTCTGGGGGTCAAATT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHVEVPA*SSGGQI
Trigger: AATTTGACCCCCAGAACTCCAGGCTGGCACCTCGAC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAACAGTCCCTGCAGCATaGAGATTGCCTTGTCCGACA +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQTVPAA*RLPCPT
Trigger: TGTCGGACAAGGCAATCTCCATGCTGCAGGGACTGT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCCATTCGTTGATATCTTaGCAGTGTCCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSHSLIS*QCPFLT
Trigger: GGTCAGGAAAGGACACTGCCAAGATATCAACGAATG...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTCACTCATCCACATCTTaGCAGCCCTTCTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSHSSTS*QPFSSE
Trigger: CTCAGATGAGAAGGGCTGCCAAGATGTGGATGAGTG...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCATCCGGCCCAGGACACTaGAGCAGGGCGCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSSGPGH*SRAHGP
Trigger: AGGGCCATGCGCCCTGCTCCAGTGTCCTGGGCCGGA...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAAGGAGACTCAAGGATaGGTGTGCGGTCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPKETQG*VCGPLS
Trigger: ACTCAGCGGACCGCACACCCATCCTTGAGTCTCCTT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTGCCCCTGCCTGTGACTaGAGGCCATTTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSAPACD*RPFPGS
Trigger: ACTACCTGGAAATGGCCTCCAGTCACAGGCAGGGGC...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGGGCCCAGAACAGATTaGCTGAGTGGTGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLGPRTD*LSGGDG
Trigger: ACCATCACCACCACTCAGCCAATCTGTTCTGGGCCC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCACAATATCTCAAGGTTaGCAGGAAGGTGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSTISQG*QEGGDW
Trigger: CCAATCTCCACCTTCCTGCCAACCTTGAGATATTGT...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGCTCGCAAACGGGTTTaGTACAGTGGTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLARKRV*YSGWCC
Trigger: ACAGCACCAACCACTGTATCAAACCCGTTTGCGAGC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGCTCGCAAACGGGTTTaGTACAGTGGTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPARKRV*YSGWCC
Trigger: ACAGCACCAACCACTGTATCAAACCCGTTTGCGAGC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGATTGATATCTTGGCAGTaGGTGAGGTTCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGLISWQ*VRFSLL
Trigger: CAAGAGACTGAACCTCACTCACTGCCAAGATATCAA...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCATTGATATCTTGGCAGTaGGTGAGGTTCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPLISWQ*VRFSLL
Trigger: CAAGAGACTGAACCTCACTCACTGCCAAGATATCAA...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR TCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAACAAGCCAGGTGTCCGTaGCGACCCGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKQARCP*RPGGAA
Trigger: GGCAGCCCCTCCGGGTCGTCACGGACACCTGGCTTG...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACACTCATTGATATCTTaGCACTCCTGTGTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQHSLIS*HSCVAP
Trigger: AGGGGCGACACAGGAGTGTCAAGATATCAATGAGTG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTGCTGCTCACACTCATTaGTATCTTGACACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSAAHTH*YLDTPV
Trigger: CACAGGAGTGTCAAGATATCAATGAGTGTGAGCAGC...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTGCTCACAAGAGCATCTaGAGGAGCCTTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGAHKSI*RSLLGW
Trigger: CCAACCTAGAAGGCTCCTTCAGATGCTCTTGTGAGC...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATGGCGGATTCAGCTACTaGATATTTTCTTTAGACGTA +
Preference number: 4 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHGGFSY*IFSLDV
Trigger: TACGTCTAAAGAAAATATTCAGTAGCTGAATCCGCC...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGTGGTTGGTGCTGTTTaGTGTTGTCCATCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHVVGAV*CCPSWA
Trigger: TGCCCAGGATGGACAACAGCAAACAGCACCAACCAC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCACCTCTCCAGCCGCACTaGTCCTGCGCAGGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSPLQPH*SCAGWV
Trigger: CACCCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGG...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAGGGCGGCGACTGTGGTaGTGGCGGCTGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLGRRLW*WRLCSG
Trigger: GCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCC...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGTGTGAAAGTGGACTaGTTCAGTGGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSVKVD*FSGASS
Trigger: GCTGGAAGCCCCACTGAAGCAGTCCACTTTCACACT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAATGTGCACAGGTAGCTaGCCCTGGTATTCACACACT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQMCTGS*PWYSHT
Trigger: AGTGTGTGAATACCAGGGGCAGCTACCTGTGCACAT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGTTCTTCCTGTATCTCTaGAATCCCCTGTTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVFFLYL*NPLFRH
Trigger: ATGCCTGAACAGGGGATTGCAGAGATACAGGAAGAA...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR GCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATGCTGGTAGCCAGGGCTaGAGACACATCTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHAGSQG*RHICIH
Trigger: ATGGATACAGATGTGTCTGCAGCCCTGGCTACCAGC...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAAGCCTTCTAGGTTGGTaGACTTTCCATGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQSLLGW*TFHGHR
Trigger: TCTGTGCCCATGGAAAGTGCACCAACCTAGAAGGCT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGTGCTCCTCCCCCATaGACTCATTCACATCCTCAC +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSAPPP*THSHPH
Trigger: GTGAGGATGTGAATGAGTGCATGGGGGAGGAGCACT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR GCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGTGGAAGCCGGGATTaGACAGGCAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSGSRD*TGRHNQ
Trigger: CTGGTTATGTCTGCCTGTGCAATCCCGGCTTCCACT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAACGGGTTTGATACAGTaGTTGGTGCTGTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGTGLIQ*LVLFAV
Trigger: AACAGCAAACAGCACCAACCACTGTATCAAACCCGT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGACGGGTTTGATACAGTaGTTGGTGCTGTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKTGLIQ*LVLFAV
Trigger: AACAGCAAACAGCACCAACCACTGTATCAAACCCGT...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTACAGGGTCCCAGCTGGTaGCGACTGTGGTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLQGPSW*RLWCGR
Trigger: CCGCCCGCACCACAGTCGCCACCAGCTGGGACCCTG...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTAGAGGTACCGCCTGTTaGGTGCCATCTCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSRGTAC*VPSLCS
Trigger: TGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCT...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACATTCGTTGATATCTTaGCAGTGTCCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGHSLIS*QCPFLT
Trigger: GGTCAGGAAAGGACACTGCCAAGATATCAACGAATG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCATTGAGGCACTCGCCGTaGGGTGCGCAGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSLRHSP*GAQCSS
Trigger: GGAGGAGCACTGCGCACCCCACGGCGAGTGCCTCAA...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACTGATTGGAAACCTCTaGCCTGATGTCACGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQLIGNL*PDVTVS
Trigger: AGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTATGGTGGATTGTGGCTaGAAAGGGGTGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPMVDCG*KGVSAV
Trigger: CACTGCAGACACCCCTTTCCAGCCACAATCCACCAT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CCA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAAAGACAGGAAACAATaGAAACGTCTGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KDLPRADVASVPVVGSSGKDRKQ*KRLSVR
Trigger: CCTCACTGACAGACGTTTCCATTGTTTCCTGTCTTT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGAAGTGAAACAGCTTTaGTGCCCACCTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHEVKQL*CPPLPQ
Trigger: CTGGGGAAGAGGTGGGCACCAAAGCTGTTTCACTTC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGTATCTTGGCAGTGAGTaGGGTTCAGTCTCTTGTACC +
Preference number: 4 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQYLGSE*GSVSCT
Trigger: GGTACAAGAGACTGAACCTCACTCACTGCCAAGATA...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAATATCTTGGCAGTGAGTaGGGTTCAGTCTCTTGTACC +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQYLGSE*GSVSCT
Trigger: GGTACAAGAGACTGAACCTCACTCACTGCCAAGATA...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGCTGCTCACACTCATTaGTATCTTGACACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQAAHTH*YLDTPV
Trigger: CACAGGAGTGTCAAGATATCAATGAGTGTGAGCAGC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR TCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCCAGAACAGATTGGCTaGGTGGTGGTGATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPPEQIG*VVVMVL
Trigger: AAGAACCATCACCACCACTCAGCCAATCTGTTCTGG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGAGCTGTAAAATGAAATaGGGCAGCTCTAATTGCAAG +
Preference number: 4 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLSCKMK*GSSNCK
Trigger: CTTGCAATTAGAGCTGCCTCATTTCATTTTACAGCT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGCGACAGGCGCGTCCTaGTCCCGGAACAGACTGTAC +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSATGAS*SRNRLY
Trigger: GTACAGTCTGTTCCGGGAGCAGGACGCGCCTGTCGC...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAAGCCTTCTAGGTTGGTaGACTTTCCATGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSSLLGW*TFHGHR
Trigger: TCTGTGCCCATGGAAAGTGCACCAACCTAGAAGGCT...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGATTCCGTGTAGGTGGTaGGGTGCCCACGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKIPCRW*GAHAGV
Trigger: AACCCCTGCGTGGGCACCGCACCACCTACACGGAAT...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTTGGAGTTCTGAGGGCTaGAAAGGAGACTCAAGGATG +
Preference number: 4 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGWSSEG*KGDSRM
Trigger: CATCCTTGAGTCTCCTTTGCAGCCCTCAGAACTCCA...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGCTGGAAAGGGGTGTCTaGAGTGTGAGGCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKLERGV*SVRPWG
Trigger: GCCCCATGGCCTCACACTGCAGACACCCCTTTCCAG...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGTAAACTCAGAGGAATaGCTGCCATCGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPVNSEE*LPSFSE
Trigger: TTCAGAAAACGATGGCAGGCATTCCTCTGAGTTTAC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCCTCTTCCCCAGTTTTaGAGCAACACAGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHPLPQF*SNTDLD
Trigger: ATCCAGGTCTGTGTTGCTGCAAAACTGGGGAAGAGG...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR GCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATGTGAAACAGCTTTGGTaGCCACCTCTTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHVKQLW*PPLPQF
Trigger: AAACTGGGGAAGAGGTGGGCACCAAAGCTGTTTCAC...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAGTCTGCGCAGGTGGCTaGACACGCCGCGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLVCAGG*TRRDCC
Trigger: GCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGAC...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCATGCTGCTGGGAAGGGTaGGTCTGGCTGAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSCCWEG*VWLRPL
Trigger: GAGTGGCCTCAGCCAGACCCACCCTTCCCAGCAGCA...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAACAGCGGCTCCGCGATaGATCCAGCATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSTAAPR*IQHEAR
Trigger: CCTGGCCTCATGCTGGATCCATCGCGGAGCCGCTGT...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTCACACATGGTGTCGTTaGCGCACTCGTCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: LLVPTGYHWADSATEYFLHTWCR*RTRLCQ
Trigger: TTGACATAGACGAGTGCGCCAACGACACCATGTGTG...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCACACATGGTGTCGTTaGCGCACTCGTCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHHTWCR*RTRLCQ
Trigger: TTGACATAGACGAGTGCGCCAACGACACCATGTGTG...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CCA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCTGATTGGAAACCTCTaGCCTGATGTCACGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHLIGNL*PDVTVS
Trigger: AGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCATGCTCCAGTCACATaGAGCCTTGTTCATTTACAT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVHAPVT*SLVHLH
Trigger: ATGTAAATGAACAAGGCTCCATGTGACTGGAGCATG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCACAGGGAGGTCCTCCGTaGTGCTGGTGCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSQGGPP*CWCCSC
Trigger: GCATGAACAGCACCAGCAGCACGGAGGACCTCCCTG...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAAGCCCTTGCTGCTGGTaGCCACAGGCTATCACTGGG +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSSPCCW*PQAITG
Trigger: CCCAGTGATAGCCTGTGGGCACCAGCAGCAAGGGCT...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTATGCTCCTGCGCAGGTTaGGTGAACGCTCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLCSCAG*VNARPS
Trigger: GCTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCA...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAACTCAGGGTCCCAGCTaGTGGCGACTGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLTQGPS*WRLWCG
Trigger: CCCGCACCACAGTCGCCACCAGCTGGGACCCTGAGT...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAGCCAGGGCGGGGGTCTaGTCTCCACGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLARAGV*SPRCSP
Trigger: TGGAGAACAGCGTGGAGACCAGACCCCCGCCCTGGC...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTTCACCAGCACATCAGTaGAGGGGGTCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSSPAHQ*RGSLVL
Trigger: AAGAACAAGTGACCCCCTCCACTGATGTGCTGGTGA...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTACAACATTGGAAATCTaGCTGCTTCTGAACAAGACC +
Preference number: 4 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVTTLEI*LLLNKT
Trigger: GGTCTTGTTCAGAAGCAGCCAGATTTCCAATGTTGT...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCCAGCAGGATATATTTaGGGGATGGTAAGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPPAGYI*GMVSSP
Trigger: CGGAGAACTTACCATCCCCCAAATATATCCTGCTGG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGCCTGCCATCGTTTTCTaGAGGGAAAGGGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKPAIVF*RERAGV
Trigger: AACCCCTGCCCTTTCCCTTCAGAAAACGATGGCAGG...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAACCATGGGGCCTTGCATaGTCGCACAGCTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKPWGLA*SHSLGG
Trigger: CCCTCCCAAGCTGTGCGAGCATGCAAGGCCCCATGG...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCATTCGTTGATATCTTaGCAGTGTCCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPHSLIS*QCPFLT
Trigger: GGTCAGGAAAGGACACTGCCAAGATATCAACGAATG...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCACACACGGGTCTGTGGTaGCACACTCGTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSHTGLW*HTRPHP
Trigger: AGGATGTGGACGAGTGTGCCACCACAGACCCGTGTG...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGCTCTCTGGGGAGGGCTaGAAGCCAGTCTCACATAGA +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKLSGEG*KPVSHR
Trigger: TCTATGTGAGACTGGCTTCCAGCCCTCCCCAGAGAG...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCATCCATGTGGATGTCGTaGTCAGGGAGGTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSSMWMS*SGRSSV
Trigger: CACGGAGGACCTCCCTGACCACGACATCCACATGGA...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAAGGGGGCCCCATCTaGGCCATAGATGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSEGGPI*AIDAVV
Trigger: CACTACAGCATCTATGGCCCAGATGGGGCCCCCTTC...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAGGCCAGGAAAGGTGGTaGACAGGGCCTCATGCGGTG +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLGQERW*TGPHAV
Trigger: CACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCC...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAGACGTATAAAGCCTTaGCTCCCCTTTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPRRIKP*LPFLIN
Trigger: GTTGATGAGAAAGGGGAGCCAAGGCTTTATACGTCT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGCAGGAAGGTGGAGATTaGAGTGTTGTGGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKQEGGD*SVVGAV
Trigger: CACTGCCCCCACAACACTCCAATCTCCACCTTCCTG...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAACACACAGTCCCAGCCTaGGGGAGAGATCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKHTVPA*GRDLEA
Trigger: GGCTTCGAGATCTCTCCCTCAGGCTGGGACTGTGTG...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGAAGTGCAGAACAGCATaGATAGTATGCTATTTGTAT +
Preference number: 4 (lower is better)
Translates to: PQILKDLPRADVASVPVVKCRTA*IVCYLY
Trigger: ATACAAATAGCATACTATGCATGCTGTTCTGCACTT...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAACGTGGCTGCCACACATaGTGTCGTTGGCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKRGCHT*CRWRTR
Trigger: ACGAGTGCGCCAACGACACCATGTGTGGCAGCCACG...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGCCCACAGGCTATCACTaGGCGGATTCAGCTACTGAA +
Preference number: 4 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKPTGYH*ADSATE
Trigger: TTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGG...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 72 bp ACCTATCCACCCTGTCACCCTCCCCACAAACCACCATaGGTTCTAAGAATTTATCCTGCAGATGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: TYPPCHPPHKPP*VLRIYPADVIP
Trigger: TGGGATTACATCTGCAGGATAAATTCTTAGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAGCAGCCCTTCTCATCTaGGGTGACCTCATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKAALLI*GDLIAL
Trigger: CAGGGCTATGAGGTCACCTCAGATGAGAAGGGCTGC...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGTGGTTGGTGCTGTTTaGTGTTGTCCATCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSVVGAV*CCPSWA
Trigger: TGCCCAGGATGGACAACAGCAAACAGCACCAACCAC...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAGTACCGCCTGTTGGGTaGCATCTCTCTGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLVPPVG*HLSAQG
Trigger: GCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTAC...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAACTCGTCTATGTCAATaGAGTCTCCGTTCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSTRLCQ*SLRSGP
Trigger: TGGCCCCGAACGGAGACTGCATTGACATAGACGAGT...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAAGTGAAGGGATCTTCTaGCACTCCTTGGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSSEGIF*HSLGSE
Trigger: CTCTGACCCCAAGGAGTGGCAGAAGATCCCTTCACT...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAAGGAGCCTTCTAGGTTaGTGCACTTTCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSRSLLG*CTFHGH
Trigger: GTGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCT...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAGGCATGAGGCCCGGCTaGCACACTCATCCACATCTT +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKGMRPG*HTHPHL
Trigger: AAGATGTGGATGAGTGTGCCAGCCGGGCCTCATGCC...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 72 bp TCTTTATTCCACCATGGTTCTGAACTCCCAGCTAGTTaGGGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLFHHGSELPAS*GWSESLLVNSE
Trigger: CTCTGAGTTTACAAGCAGAGACTCACTCCAACCCAAACTAGCTGGGAGTTCAGAACCATGGTGGAATAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAAGCATATCTGCTTGGTaGTCCGCTGGGCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKSISAW*SAGPKA
Trigger: TGCCTTTGGCCCAGCGGATCACCAAGCAGATATGCT...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAATGGAAACCTCTGGCCTaGTGTCACGGTGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKWKPLA*CHGVFP
Trigger: TGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCA...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAACACTGACCCCTGACTaGTACTCCTTGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLTLTPD*YSLAVQ
Trigger: CTGCACTGCCAAGGAGTAGCAGTCAGGGGTCAGTGT...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTACAGAAGAGACCAGATaGACATTTCTTTATTCCACC +
Preference number: 4 (lower is better)
Translates to: GWSESLLVNSEECLPSFSTEETR*TFLYST
Trigger: GGTGGAATAAAGAAATGTGCATCTGGTCTCTTCTGT...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCATACAGGATGGAGGTGTaGCAAAATCAGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSYRMEV*QNQGPE
Trigger: TTCTGGGCCCTGATTTTGCCACACCTCCATCCTGTA...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 72 bp CCATGCTCCAGTCACATGGAGCCTTGTTCATTTACATaGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PCSSHMEPCSFT*PFIREVRSQSF
Trigger: AAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTGGAGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 72 bp GTAGCATTCACTTCCATGCTCCAGTCACATGGAGCCTaGTTCATTTACATTGCCATTCATCAGAGAAGTACG +
Preference number: 4 (lower is better)
Translates to: VAFTSMLQSHGA*FIYIAIHQRST
Trigger: CGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTGGAGCATGGAAGTGAATGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAAGTGTGAAAGTGGACTaGTTCAGTGGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKSVKVD*FSGASS
Trigger: GCTGGAAGCCCCACTGAAGCAGTCCACTTTCACACT...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAACCGCATCTGTGTACATaGTCTGTCCAAACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKPHLCT*SVQTSR
Trigger: CCTGGACGTTTGGACAGACCATGTACACAGATGCGG...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAAAATCTGGCTGCTTCTaGACAAGACCACACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSKSGCF*TRPHWK
Trigger: TTTCCAGTGTGGTCTTGTTCAGAAGCAGCCAGATTT...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATGTGCACAGGTAGCTaGCCCTGGTATTCACACACT +
Preference number: 4 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLMCTGS*PWYSHT
Trigger: AGTGTGTGAATACCAGGGGCAGCTACCTGTGCACAT...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCATGTTACATGCTGTTATaGAACCCTCCCTTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSCYMLL*NPPFSP
Trigger: AGGGGAAAAGGGAGGGTTGCATAACAGCATGTAACA...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 72 bp TTTCCTTGTCTTTTAATAGTAAAGAGTCATTTCCCATaGGAACCCATCATAGGCTATCAGCAGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FPCLLIVKSHFP*EPIIGYQQSWP
Trigger: TGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTTTACTATTAAAAGACAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR TCA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCACAAAAGGAGATACAGTaGAAAGTCTCCCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSQKEIQ*KVSQSC
Trigger: ACAGGATTGGGAGACTTTTCACTGTATCTCCTTTTG...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR GCA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAATCTGGCAGAAATAGATaGGGAAGCCAGACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKSGRNR*GSQTWD
Trigger: ATCCCAAGTCTGGCTTCCGCATCTATTTCTGCCAGA...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 72 bp TTTTCATCATGTCCTCTTGCTGCTTTCTCAGGCTCTTaGTTCTTCTTCATTTGTGTCTCTTACATTCAACAA +
Preference number: 4 (lower is better)
Translates to: FSSCPLAAFSGS*FFFICVSYIQQ
Trigger: TTGTTGAATGTAAGAGACACAAATGAAGAAGAACAAAGAGCCTGAGAAAGCAGCAAGAGGACATGATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
3UTR CAA 72 bp AAACTGGTTTTCACAAAAGGAGATCCCAGAAGAGGTTaGTTTCCTGTAAGAAGCAGTGTTTATGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: KLVFTKGDPRRG*FPVRSSVYVIE
Trigger: CTCTATTACATAAACACTGCTTCTTACAGGAAACAAACCTCTTCTGGGATCTCCTTTTGTGAAAACCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS CCA 90 bp GAGTGGTGCGCGCGGGCACCGCGAAGAGCTTTGTGGTCGGCACGCTaGACGCCCGCGGGCTGTTCTCCCGGCCCCGCCCGGCGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: EWCARAPRRALWSAR*TPAGCSPGPARRPA
Trigger: AGCTGGCCGCCGGGCGGGGCCGGGAGAACAGCCCGCGGGCGTCCAGCGTGCCGACCACAAAGCTCTTCGCGGTGCCCGCGCGCACCACTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp AGGCGTGGGAGAGCCGGCGCGGCCCGGGTCCGGGGTGCTGGTTGCTaGTGGCCCAGGGGAGTGCTTCTCCGGGTCTGCGCAGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RRGRAGAARVRGAGC*WPRGVLLRVCAGGW
Trigger: CCAGCCACCTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCCGCGCCGGCTCTCCCACGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CCCGGGCTGCGGGCTTTGGTCCGCGGCCTCATGGCGCGGGGCGGCTaGAGAGTGGTGCGCGCGGGCACCGCGAAGAGCTTTGTGGTCGGC +
Preference number: 5 (lower is better)
Translates to: PGLRALVRGLMARGG*RVVRAGTAKSFVVG
Trigger: GCCGACCACAAAGCTCTTCGCGGTGCCCGCGCGCACCACTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCAAAGCCCGCAGCCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp CGGGGTGCTGGTTGCTGCTGGCCCAGGGGAGTGCTTCTCCGGGTCTaGGCAGGTGGCTGGACACGCCGCGACTGCTGCGCGCGGGACGGC +
Preference number: 5 (lower is better)
Translates to: RGAGCCWPRGVLLRV*AGGWTRRDCCARDG
Trigger: GCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GCGCGGCCCGGGTCCGGGGTGCTGGTTGCTGCTGGCCCAGGGGAGTaGTTCTCCGGGTCTGCGCAGGTGGCTGGACACGCCGCGACTGCT +
Preference number: 5 (lower is better)
Translates to: ARPGSGVLVAAGPGE*FSGSAQVAGHAATA
Trigger: AGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CGTGGGAGAGCCGGCGCGGCCCGGGTCCGGGGTGCTGGTTGCTGCTaGCCCAGGGGAGTGCTTCTCCGGGTCTGCGCAGGTGGCTGGACA +
Preference number: 5 (lower is better)
Translates to: RGRAGAARVRGAGCC*PRGVLLRVCAGGWT
Trigger: TGTCCAGCCACCTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCCGCGCCGGCTCTCCCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GGGCTTTGGTCCGCGGCCTCATGGCGCGGGGCGGCTGGAGAGTGGTaGGCGCGGGCACCGCGAAGAGCTTTGTGGTCGGCACGCTGGACG +
Preference number: 5 (lower is better)
Translates to: GLWSAASWRGAAGEW*ARAPRRALWSARWT
Trigger: CGTCCAGCGTGCCGACCACAAAGCTCTTCGCGGTGCCCGCGCGCACCACTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCAAAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GGCTGGGCCCGCTCCACGGGCTGCAAGCCCGCGACAGGCGCGTCCTaGTCCCGGAACAGACTGTACACCTTGGCTGCAGCCGCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: GWARSTGCKPATGAS*SRNRLYTLAAAAAG
Trigger: CCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTTCCGGGAGCAGGACGCGCCTGTCGCGGGCTTGCAGCCCGTGGAGCGGGCCCAGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp GAGGGCTGCGCGCCCCGAGCCTCGAGTCCGCGCTCCTACTCCAGCTaGGCTCGCACGGCTGCTGCACCTTCGCGCCTCCTCCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: EGCAPRASSPRSYSS*ARTAAAPSRLLPVP
Trigger: AGGCACAGGGAGGAGGCGCGAAGGTGCAGCAGCCGTGCGAGCCCAGCTGGAGTAGGAGCGCGGACTCGAGGCTCGGGGCGCGCAGCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS CCA 90 bp TGCGGGCTTTGGTCCGCGGCCTCATGGCGCGGGGCGGCTGGAGAGTaGTGCGCGCGGGCACCGCGAAGAGCTTTGTGGTCGGCACGCTGG +
Preference number: 5 (lower is better)
Translates to: CGLWSAASWRGAAGE*CARAPRRALWSARW
Trigger: CCAGCGTGCCGACCACAAAGCTCTTCGCGGTGCCCGCGCGCACCACTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCAAAGCCCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GGCCTCAAGCCAGGTGTCCGTGACGACCCGGAGGGGCTGCCTCTCTaGTGGCCCGGGCAGTGCCCCGCTGCTCCTCTGCCCTTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GLKPGVRDDPEGLPL*WPGQCPAAPLPLLP
Trigger: AGGGAGCAAGGGCAGAGGAGCAGCGGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCCCTCCGGGTCGTCACGGACACCTGGCTTGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp TCCTCGCAGCGGGCTCCACGGAAACCAGAGCGGCAGACACAGAGCTaGGGGCGGCTGCAGGAGCCCCGGTTCTGGCACGGCGGCTCGCAA +
Preference number: 5 (lower is better)
Translates to: SSQRAPRKPERQTQS*GRLQEPRFWHGGSQ
Trigger: TTGCGAGCCGCCGTGCCAGAACCGGGGCTCCTGCAGCCGCCCGCAGCTCTGTGTCTGCCGCTCTGGTTTCCGTGGAGCCCGCTGCGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp CAGGGTCCCAGCTGGTGGCGACTGTGGTGCGGGCGGCGACTGTGGTaGTGGCGGCTGTGCTCTGGCCAAGGTGCCCTCTCCAGCCGCACT +
Preference number: 5 (lower is better)
Translates to: QGPSWWRLWCGRRLW*WRLCSGQGALSSRT
Trigger: AGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCACCACAGTCGCCACCAGCTGGGACCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp ACTCAGGGTCCCAGCTGGTGGCGACTGTGGTGCGGGCGGCGACTGTaGTGCTGGCGGCTGTGCTCTGGCCAAGGTGCCCTCTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TQGPSWWRLWCGRRL*CWRLCSGQGALSSR
Trigger: GCGGCTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCACCACAGTCGCCACCAGCTGGGACCCTGAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CTCAAGCCAGGTGTCCGTGACGACCCGGAGGGGCTGCCTCTCTGCTaGCCCGGGCAGTGCCCCGCTGCTCCTCTGCCCTTGCTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LKPGVRDDPEGLPLC*PGQCPAAPLPLLPW
Trigger: CCAAGGGAGCAAGGGCAGAGGAGCAGCGGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCCCTCCGGGTCGTCACGGACACCTGGCTTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 90 bp AGTCACCCTTGTCAGGGATGGTCCCGGCCTCAAGCCAGGTGTCCGTaGCGACCCGGAGGGGCTGCCTCTCTGCTGGCCCGGGCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: SHPCQGWSRPQARCP*RPGGAASLLARAVP
Trigger: GGGCACTGCCCGGGCCAGCAGAGAGGCAGCCCCTCCGGGTCGTCACGGACACCTGGCTTGAGGCCGGGACCATCCCTGACAAGGGTGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp CCCGGAACAGACTGTACACCTTGGCTGCAGCCGCTGCCGGGTAGCTaGCCCCAGGGCGCCGCAGTCGATTCGCGTCTCCACCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PGTDCTPWLQPLPGS*PQGAAVDSRLHQPA
Trigger: AGCCGGCTGGTGGAGACGCGAATCGACTGCGGCGCCCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTTCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp CGCGTCCTGCTCCCGGAACAGACTGTACACCTTGGCTGCAGCCGCTaGCGGGTAGCTGCCCCCAGGGCGCCGCAGTCGATTCGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: RVLLPEQTVHLGCSR*RVAAPRAPQSIRVS
Trigger: GGAGACGCGAATCGACTGCGGCGCCCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTTCCGGGAGCAGGACGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp CGCGACAGGCGCGTCCTGCTCCCGGAACAGACTGTACACCTTGGCTaGAGCCGCTGCCGGGTAGCTGCCCCCAGGGCGCCGCAGTCGATT +
Preference number: 5 (lower is better)
Translates to: RDRRVLLPEQTVHLG*SRCRVAAPRAPQSI
Trigger: AATCGACTGCGGCGCCCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTTCCGGGAGCAGGACGCGCCTGTCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GTGCTGGCGGCTGTGCTCTGGCCAAGGTGCCCTCTCCAGCCGCACTaGTCCTGCGCAGGTTGGGTGAACGCTCGGCCCAGCGTCGAGGTG +
Preference number: 5 (lower is better)
Translates to: VLAAVLWPRCPLQPH*SCAGWVNARPSVEV
Trigger: CACCTCGACGCTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GTGCGGGCGGCGACTGTGGTGCTGGCGGCTGTGCTCTGGCCAAGGTaGCCTCTCCAGCCGCACTGCTCCTGCGCAGGTTGGGTGAACGCT +
Preference number: 5 (lower is better)
Translates to: VRAATVVLAAVLWPR*PLQPHCSCAGWVNA
Trigger: AGCGTTCACCCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CTGGTCCCGGGGGCAGGGCGTTGGAAGAGAGCTGGCTACTGGCCGTaGCAGTCGGGTGAAGTCGGACAGTGCGGGACAACCCCACGTGCT +
Preference number: 5 (lower is better)
Translates to: LVPGAGRWKRAGYWP*QSGEVGQCGTTPRA
Trigger: AGCACGTGGGGTTGTCCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGCCCTGCCCCCGGGACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CAAGGCCTGGTCCCGGGGGCAGGGCGTTGGAAGAGAGCTGGCTACTaGCCGTGGCAGTCGGGTGAAGTCGGACAGTGCGGGACAACCCCA +
Preference number: 5 (lower is better)
Translates to: QGLVPGAGRWKRAGY*PWQSGEVGQCGTTP
Trigger: TGGGGTTGTCCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGCCCTGCCCCCGGGACCAGGCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 90 bp TCTCCACCAGCCGGCTCGTATCTCCCTACGGGGTCCCTTTGGGCATaGCCCGCGCCCACGAAGAGAGCCAGGGTGAGCGGCAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: SPPAGSYLPTGSLWA*PAPTKRARVSGRKP
Trigger: AGGCTTCCTGCCGCTCACCCTGGCTCTCTTCGTGGGCGCGGGTCATGCCCAAAGGGACCCCGTAGGGAGATACGAGCCGGCTGGTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 90 bp GGCAGGGCGTTGGAAGAGAGCTGGCTACTGGCCGTGGCAGTCGGGTaGAGTCGGACAGTGCGGGACAACCCCACGTGCTGCTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GRALEESWLLAVAVG*SRTVRDNPTCCWEG
Trigger: CCCTTCCCAGCAGCACGTGGGGTTGTCCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GGGCAGTGCCCCGCTGCTCCTCTGCCCTTGCTCCCTTGGGGGCCTTaGCAGTTCCTCCTCCTCGGCTTTCCTCATGGACAGGCGGATGTC +
Preference number: 5 (lower is better)
Translates to: GQCPAAPLPLLPWGP*QFLLLGFPHGQADV
Trigger: GACATCCGCCTGTCCATGAGGAAAGCCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAGCAAGGGCAGAGGAGCAGCGGGGCACTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp GCTCCCTTGGGGGCCTTGCCAGTTCCTCCTCCTCGGCTTTCCTCATaGACAGGCGGATGTCGGAGCTCGCGTAGGTGTAGCCGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: APLGALPVPPPRLSS*TGGCRSSRRCSRGR
Trigger: CCGGCCACGGCTACACCTACGCGAGCTCCGACATCCGCCTGTCCATGAGGAAAGCCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp GATGCTGTAGTGCAGGTCATCGGGCCCGGGGCCATACTCATAGCCTaGCCGGAAGTGGACCCCGGCCTCCCGCTCTGCCTCAATGCGAGC +
Preference number: 5 (lower is better)
Translates to: DAVVQVIGPGAILIA*PEVDPGLPLCLNAS
Trigger: GCTCGCATTGAGGCAGAGCGGGAGGCCGGGGTCCACTTCCGGCCAGGCTATGAGTATGGCCCCGGGCCCGATGACCTGCACTACAGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GATGAGGGGTGCTCCAGAGGTACCGCCTGTTGGGTGCCATCTCTCTaGTCAAGGCCTGGTCCCGGGGGCAGGGCGTTGGAAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: DEGCSRGTACWVPSL*SRPGPGGRALEESW
Trigger: CCAGCTCTCTTCCAACGCCCTGCCCCCGGGACCAGGCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTGGAGCACCCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CTCCAGAGGTACCGCCTGTTGGGTGCCATCTCTCTGCTCAAGGCCTaGTCCCGGGGGCAGGGCGTTGGAAGAGAGCTGGCTACTGGCCGT +
Preference number: 5 (lower is better)
Translates to: LQRYRLLGAISLLKA*SRGQGVGRELATGR
Trigger: ACGGCCAGTAGCCAGCTCTCTTCCAACGCCCTGCCCCCGGGACCAGGCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CAGACTTGGGATCGTGCCCATGGCCGCCCTGGCTGTACAGGGTGGTaGTGTCGCCCCTCTCACAGCTGTTGGCACAGTGTCCACGGGCAC +
Preference number: 5 (lower is better)
Translates to: QTWDRAHGRPGCTGW*CRPSHSCWHSVHGH
Trigger: GTGCCCGTGGACACTGTGCCAACAGCTGTGAGAGGGGCGACACCACCACCCTGTACAGCCAGGGCGGCCATGGGCACGATCCCAAGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp GGGTGCAGCAGCATTCAGCCTGTGTGGTGTTCCGGCCCAGGACACTaGAGCAGGGCGCATGGCCCTTCTGCCCGGAGTAGCAGTCCATGC +
Preference number: 5 (lower is better)
Translates to: GCSSIQPVWCSGPGH*SRAHGPSARSSSPC
Trigger: GCATGGACTGCTACTCCGGGCAGAAGGGCCATGCGCCCTGCTCCAGTGTCCTGGGCCGGAACACCACACAGGCTGAATGCTGCTGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp GAGACTCAAGGATGGGTGTGCGGTCCGCTGAGTGACCGGCTGTGTTaGGGAAGGCAGGCTCAGGGACGGTGTCCTCGGGGCCCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: ETQGWVCGPLSDRLC*GRQAQGRCPRGPGS
Trigger: ACTACCTGGGCCCCGAGGACACCGTCCCTGAGCCTGCCTTCCCCAACACAGCCGGTCACTCAGCGGACCGCACACCCATCCTTGAGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCCCGGGCTGCGGGCTTaGGTCCGCGGCCTCATGGCG +
Preference number: 5 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLPGLRA*VRGLMA
Trigger: CGCCATGAGGCCGCGGACCAAAGCCCGCAGCCCGGG...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACCCGGGCTGCGGGCTTaGGTCCGCGGCCTCATGGCG +
Preference number: 5 (lower is better)
Translates to: KDLPRADVASVPVVGSSGPGLRA*VRGLMA
Trigger: CGCCATGAGGCCGCGGACCAAAGCCCGCAGCCCGGG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS GCA 90 bp GGCAGAACTTCCCGGTGGAGTTGGCGGGGCACCAGCATTCGTCCCTaGCGATGCAGCGGCCTCCGTTCAGGCAGGGGATCTGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: GRTSRWSWRGTSIRP*RCSGLRSGRGSGRN
Trigger: ATTTCTGCCAGATCCCCTGCCTGAACGGAGGCCGCTGCATCGGCAGGGACGAATGCTGGTGCCCCGCCAACTCCACCGGGAAGTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GGAAGTGGACCCCGGCCTCCCGCTCTGCCTCAATGCGAGCCACGTTaGACAGCTGAGCATAGACCTCAGAGCTCCTCGGGGGACACAGAG +
Preference number: 5 (lower is better)
Translates to: GSGPRPPALPQCEPR*TAEHRPQSSSGDTE
Trigger: CTCTGTGTCCCCCGAGGAGCTCTGAGGTCTATGCTCAGCTGTGCAACGTGGCTCGCATTGAGGCAGAGCGGGAGGCCGGGGTCCACTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp TCCTCAGACGGGCAGAGGTCACAGGCATCTCCCCAGCTAGCGCCCTaGGTGCAGCAGCATTCAGCCTGTGTGGTGTTCCGGCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: SSDGQRSQASPQLAP*VQQHSACVVFRPRT
Trigger: TGTCCTGGGCCGGAACACCACACAGGCTGAATGCTGCTGCACCCAGGGCGCTAGCTGGGGAGATGCCTGTGACCTCTGCCCGTCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCACACACTCCGCGTCCTaGCACAGGCCCAGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: EALKTVTGVALPHAHTAATHSAS*HRPRVK
Trigger: CTTGACCCTGGGCCTGTGCAAGGACGCGGAGTGTGT...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCAAAGACCCGTGGCTGTaGAGGCACTCGCCGTGGGGT +
Preference number: 5 (lower is better)
Translates to: EALKTVTGVALPHAHTAAKDPWL*RHSPWG
Trigger: ACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTTT...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS GCA 90 bp ACTTCCCGGTGGAGTTGGCGGGGCACCAGCATTCGTCCCTGCCGATaGAGCGGCCTCCGTTCAGGCAGGGGATCTGGCAGAAATAGATGC +
Preference number: 5 (lower is better)
Translates to: TSRWSWRGTSIRPCR*SGLRSGRGSGRNRC
Trigger: GCATCTATTTCTGCCAGATCCCCTGCCTGAACGGAGGCCGCTGCATCGGCAGGGACGAATGCTGGTGCCCCGCCAACTCCACCGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GGGGCTGGAGTTCTGAGGGCTGCAAAGGAGACTCAAGGATGGGTGTaGGGTCCGCTGAGTGACCGGCTGTGTTGGGGAAGGCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GAGVLRAAKETQGWV*GPLSDRLCWGRQAQ
Trigger: CTGAGCCTGCCTTCCCCAACACAGCCGGTCACTCAGCGGACCGCACACCCATCCTTGAGTCTCCTTTGCAGCCCTCAGAACTCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GTGCTCTGGGCTTCAAATGAGGGCTCCAGGGAGGCTGAGACTCGCTaGTTCCACAATGCCCGGCTCCTGCTGGGGTTTGGGTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: VLWASNEGSREAETR*FHNARLLLGFGWSR
Trigger: CCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTCAGCCTCCCTGGAGCCCTCATTTGAAGCCCAGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS CCA 90 bp TTGGGTGAACGCTCGGCCCAGCGTCGAGGTGCCAGCCTGGAGTTCTaGGGGTCAAATTCCTCATCGGGAATGACCTCCTCGCAGCGGGCT +
Preference number: 5 (lower is better)
Translates to: LGERSAQRRGASLEF*GSNSSSGMTSSQRA
Trigger: AGCCCGCTGCGAGGAGGTCATTCCCGATGAGGAATTTGACCCCCAGAACTCCAGGCTGGCACCTCGACGCTGGGCCGAGCGTTCACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACCCTACGGGGTCCCTTaGGGCATGACCCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: KDLPRADVASVPVVGSSGPYGVP*GMTRAH
Trigger: GTGGGCGCGGGTCATGCCCAAAGGGACCCCGTAGGG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCCCTACGGGGTCCCTTaGGGCATGACCCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHPYGVP*GMTRAH
Trigger: GTGGGCGCGGGTCATGCCCAAAGGGACCCCGTAGGG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATGCTCCCTTGGGGGCCTaGCCAGTTCCTCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHAPLGA*PVPPPR
Trigger: CCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAGC...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS TCA 90 bp GAGGTGCCAGCCTGGAGTTCTGGGGGTCAAATTCCTCATCGGGAATaGCCTCCTCGCAGCGGGCTCCACGGAAACCAGAGCGGCAGACAC +
Preference number: 5 (lower is better)
Translates to: EVPAWSSGGQIPHRE*PPRSGLHGNQSGRH
Trigger: GTGTCTGCCGCTCTGGTTTCCGTGGAGCCCGCTGCGAGGAGGTCATTCCCGATGAGGAATTTGACCCCCAGAACTCCAGGCTGGCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GCCATACTCATAGCCTGGCCGGAAGTGGACCCCGGCCTCCCGCTCTaGCTCAATGCGAGCCACGTTGCACAGCTGAGCATAGACCTCAGA +
Preference number: 5 (lower is better)
Translates to: AILIAWPEVDPGLPL*LNASHVAQLSIDLR
Trigger: TCTGAGGTCTATGCTCAGCTGTGCAACGTGGCTCGCATTGAGGCAGAGCGGGAGGCCGGGGTCCACTTCCGGCCAGGCTATGAGTATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp ATCCATCGGGGAGGTTCACGCAGGTTCCAGGGCCACAGACGTTGGTaGCTCCAGCAGCGCATCTGTCAATGCCTGGGGTGCTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: IHRGGSRRFQGHRRW*LQQRICQCLGCSGS
Trigger: TGACCCTGAGCACCCCAGGCATTGACAGATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTGGAACCTGCGTGAACCTCCCCGATGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp TGTATCCATCGGGGAGGTTCACGCAGGTTCCAGGGCCACAGACGTTaGTGGCTCCAGCAGCGCATCTGTCAATGCCTGGGGTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: CIHRGGSRRFQGHRR*WLQQRICQCLGCSG
Trigger: CCCTGAGCACCCCAGGCATTGACAGATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTGGAACCTGCGTGAACCTCCCCGATGGATACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp CGTAGTGGGGCTGGAGTTCTGAGGGCTGCAAAGGAGACTCAAGGATaGGTGTGCGGTCCGCTGAGTGACCGGCTGTGTTGGGGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: RSGAGVLRAAKETQG*VCGPLSDRLCWGRQ
Trigger: CTGCCTTCCCCAACACAGCCGGTCACTCAGCGGACCGCACACCCATCCTTGAGTCTCCTTTGCAGCCCTCAGAACTCCAGCCCCACTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCCTCAGCACCGCGAAGAGCTTaGTGGTCGGCACGCTGGACG +
Preference number: 5 (lower is better)
Translates to: HSFTSTQAMWAASSWKPSAPRRA*WSARWT
Trigger: CGTCCAGCGTGCCGACCACAAAGCTCTTCGCGGTGC...TGAGGGCTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCCCTACGGGGTCCCTTaGGGCATGACCCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: FGKHPIARPGKVVDRASCPYGVP*GMTRAH
Trigger: GTGGGCGCGGGTCATGCCCAAAGGGACCCCGTAGGG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGACTGCTCCTGCGCAGGTaGGGTGAACGCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KDLPRADVASVPVVGSSGLLLRR*GERSAQ
Trigger: CTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCAG...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGCTGCTCCTGCGCAGGTaGGGTGAACGCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLLLLRR*GERSAQ
Trigger: CTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCAG...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCCCGGGGGCAGGGCGTaGGAAGAGAGCTGGCTACTG +
Preference number: 5 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPPGGRA*EESWLL
Trigger: CAGTAGCCAGCTCTCTTCCAACGCCCTGCCCCCGGG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGCTGCTCCTCTGCCCTaGCTCCCTTGGGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEAAPLP*LPWGPC
Trigger: GCAAGGCCCCCAAGGGAGCAAGGGCAGAGGAGCAGC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATGCATGCTCGCACAGCTaGGGAGGGTGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHACSHS*GGWMRA
Trigger: GGCCCTCATCCACCCTCCCAAGCTGTGCGAGCATGC...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS TCA 90 bp GGTAGCCCTCCTCACAGGCCAGACAAGTGTAGGAGCCAGGGGAATTaGCGCATCTCCCATCAGGGCAGGTACCGGGGTGACGGCATTCGT +
Preference number: 5 (lower is better)
Translates to: GSPPHRPDKCRSQGN*RISHQGRYRGDGIR
Trigger: ACGAATGCCGTCACCCCGGTACCTGCCCTGATGGGAGATGCGTCAATTCCCCTGGCTCCTACACTTGTCTGGCCTGTGAGGAGGGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 90 bp AGTGGAAGCCGGGATTGCACAGGCAGACATAACCAGGCACGGTGTTaGGGCACCGGCCGTTCGGGCAGAGACCAGGCCCGAATATCACAC +
Preference number: 5 (lower is better)
Translates to: SGSRDCTGRHNQARC*GTGRSGRDQARISH
Trigger: GTGTGATATTCGGGCCTGGTCTCTGCCCGAACGGCCGGTGCCTCAACACCGTGCCTGGTTATGTCTGCCTGTGCAATCCCGGCTTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 90 bp AACGGGTTTGATACAGTGGTTGGTGCTGTTTGCTGTTGTCCATCCTaGGCAGCACTGTCCCCCGCAGACGTTCCTCCCCGTGAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: NGFDTVVGAVCCCPS*AALSPADVPPREPP
Trigger: GGGCGGCTCACGGGGAGGAACGTCTGCGGGGGACAGTGCTGCCCAGGATGGACAACAGCAAACAGCACCAACCACTGTATCAAACCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATGCACCGCGAAGAGCTTaGTGGTCGGCACGCTGGACG +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHAPRRA*WSARWT
Trigger: CGTCCAGCGTGCCGACCACAAAGCTCTTCGCGGTGC...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCGCACCGCGAAGAGCTTaGTGGTCGGCACGCTGGACG +
Preference number: 5 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPAPRRA*WSARWT
Trigger: CGTCCAGCGTGCCGACCACAAAGCTCTTCGCGGTGC...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCCCCGGGGGCAGGGCGTaGGAAGAGAGCTGGCTACTG +
Preference number: 5 (lower is better)
Translates to: FGKHPIARPGKVVDRASCPGGRA*EESWLL
Trigger: CAGTAGCCAGCTCTCTTCCAACGCCCTGCCCCCGGG...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCTCCCTTGGGGGCCTaGCCAGTTCCTCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGAPLGA*PVPPPR
Trigger: CCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGGTGGCTGAAGCATTCTGCCCTTGCTCCCTaGGGGGCCTTGCCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: HSKARKGGGQGLMRWLKHSALAP*GALPVP
Trigger: AGGAACTGGCAAGGCCCCCAAGGGAGCAAGGGCAGA...ATGCTTCAGCCACCGCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCTGCTCCTCTGCCCTaGCTCCCTTGGGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGAAPLP*LPWGPC
Trigger: GCAAGGCCCCCAAGGGAGCAAGGGCAGAGGAGCAGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCAGGGCCACAGACGTaGGTGGCTCCAGCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPGPQT*VAPAAH
Trigger: ATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GCACGGCGGCTCGCAAACGGGTTTGATACAGTGGTTGGTGCTGTTTaGTGTTGTCCATCCTGGGCAGCACTGTCCCCCGCAGACGTTCCT +
Preference number: 5 (lower is better)
Translates to: ARRLANGFDTVVGAV*CCPSWAALSPADVP
Trigger: AGGAACGTCTGCGGGGGACAGTGCTGCCCAGGATGGACAACAGCAAACAGCACCAACCACTGTATCAAACCCGTTTGCGAGCCGCCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCCCCTCTCACAGCTGTaGGCACAGTGTCCACGGGCA +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCPLSQL*AQCPRA
Trigger: TGCCCGTGGACACTGTGCCAACAGCTGTGAGAGGGG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGAACTTCCCGGTGGAGTaGGCGGGGCACCAGCATTCG +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGENFPVE*AGHQHS
Trigger: CGAATGCTGGTGCCCCGCCAACTCCACCGGGAAGTT...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGACACACTCCGCGTCCTaGCACAGGCCCAGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGETHSAS*HRPRVK
Trigger: CTTGACCCTGGGCCTGTGCAAGGACGCGGAGTGTGT...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTGCTCCCTTGGGGGCCTaGCCAGTTCCTCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVAPLGA*PVPPPR
Trigger: CCGAGGAGGAGGAACTGGCAAGGCCCCCAAGGGAGC...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp GAAGCCCTCAAAACAGTCACAGGTGTAGCCCTCCCGCACGCGCACACAGCGGCCAGTGGAGGGGGTCACTaGTTCTTCCTGTATCTCTGC +
Preference number: 5 (lower is better)
Translates to: EALKTVTGVALPHAHTAASGGGH*FFLYLC
Trigger: GCAGAGATACAGGAAGAACAAGTGACCCCCTCCACT...GGCCGCTGTGTGCGCGTGCGGGAGGGCTACACCTGTGACTGTTTTGAGGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCAGGGCCACAGACGTaGGTGGCTCCAGCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKPGPQT*VAPAAH
Trigger: ATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTGG...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCAGCGCCCTTTTCCCTaGCAGGGGTCCCTCAGACAC +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHQRPFP*QGSLRH
Trigger: GTGTCTGAGGGACCCCTGCAAGGGAAAAGGGCGCTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGAGCCCACAGTGTTCTaGCACTCGCCTCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSEPTVF*HSPPRQ
Trigger: CTGCCTGGGAGGCGAGTGCAAGAACACTGTGGGCTC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTCACACACGGTGCCATaGGCCAGCTGGAAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSSHTVP*ASWKPW
Trigger: CCAGGGCTTCCAGCTGGCCAATGGCACCGTGTGTGA...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATTCACACACGGTGCCATaGGCCAGCTGGAAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHSHTVP*ASWKPW
Trigger: CCAGGGCTTCCAGCTGGCCAATGGCACCGTGTGTGA...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAAAGACCCGTGGCTGTaGAGGCACTCGCCGTGGGGT +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHKDPWL*RHSPWG
Trigger: ACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTTT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGCATGCTCGCACAGCTaGGGAGGGTGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: FGKHPIARPGKVVDRASCACSHS*GGWMRA
Trigger: GGCCCTCATCCACCCTCCCAAGCTGTGCGAGCATGC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAATCCCATGGCAGCCCTaGCTGCTGGTGCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGIPWQP*LLVPTG
Trigger: GCCTGTGGGCACCAGCAGCAAGGGCTGCCATGGGAT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS CCA 90 bp CCAGGGAGGCTGAGACTCGCTGCTTCCACAATGCCCGGCTCCTGCTaGGGTTTGGGTGGTCGAGGAGTGTGTTGCTACATAGTTTTTGGG +
Preference number: 5 (lower is better)
Translates to: PGRLRLAASTMPGSC*GLGGRGVCCYIVFG
Trigger: CCCAAAAACTATGTAGCAACACACTCCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTCAGCCTCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS-3UTR CAA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCAACAGACTGTACACCTaGGCTGCAGCCGCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: FGKHPIARPGKVVDRASCNRLYT*AAAAAG
Trigger: CCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTT...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGAACAGACTGTACACCTaGGCTGCAGCCGCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKNRLYT*AAAAAG
Trigger: CCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTT...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCAGAGGTACCGCCTGTaGGGTGCCATCTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCQRYRL*GAISLL
Trigger: GAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATCAGAGGTACCGCCTGTaGGGTGCCATCTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHQRYRL*GAISLL
Trigger: GAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTG...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCCAGAGGTACCGCCTGTaGGGTGCCATCTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPQRYRL*GAISLL
Trigger: GAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTG...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCGGGCACAGGTCTGCTaGCAGATGGTGGGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRAQVC*QMVGVK
Trigger: CTTCACTCCCACCATCTGCAAGCAGACCTGTGCCCG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACCCCTCTCACAGCTGTaGGCACAGTGTCCACGGGCA +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGPLSQL*AQCPRA
Trigger: TGCCCGTGGACACTGTGCCAACAGCTGTGAGAGGGG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAATGCGGAAGCCAGACTaGGGATCGTGCCCATGGCCG +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGMRKPD*GSCPWP
Trigger: CGGCCATGGGCACGATCCCAAGTCTGGCTTCCGCAT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAACTTCCCGGTGGAGTaGGCGGGGCACCAGCATTCG +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGNFPVE*AGHQHS
Trigger: CGAATGCTGGTGCCCCGCCAACTCCACCGGGAAGTT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGCGAGCAGGGATGTTGTaGCTGTCCCAGAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGERAGML*LSQRLW
Trigger: CCACAGCCTCTGGGACAGCAACAACATCCCTGCTCG...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCGAGCAGGGATGTTGTaGCTGTCCCAGAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCRAGML*LSQRLW
Trigger: CCACAGCCTCTGGGACAGCAACAACATCCCTGCTCG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CCACAGATTCTGAAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGCAGCGCCCTTTTCCCTaGCAGGGGTCCCTCAGACAC +
Preference number: 5 (lower is better)
Translates to: PQILKDLPRADVASVPVVQRPFP*QGSLRH
Trigger: GTGTCTGAGGGACCCCTGCAAGGGAAAAGGGCGCTG...CACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTTCAGAATCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGACAGCGCCCTTTTCCCTaGCAGGGGTCCCTCAGACAC +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGQRPFP*QGSLRH
Trigger: GTGTCTGAGGGACCCCTGCAAGGGAAAAGGGCGCTG...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAAAGACCCGTGGCTGTaGAGGCACTCGCCGTGGGGT +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGKDPWL*RHSPWG
Trigger: ACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTTT...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 90 bp GCTCCAGGGAGGCTGAGACTCGCTGCTTCCACAATGCCCGGCTCCTaGTGGGGTTTGGGTGGTCGAGGAGTGTGTTGCTACATAGTTTTT +
Preference number: 5 (lower is better)
Translates to: APGRLRLAASTMPGS*WGLGGRGVCCYIVF
Trigger: AAAAACTATGTAGCAACACACTCCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTCAGCCTCCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS CCA 90 bp GCGCACTCGTCTATGTCCACACACTCTCCACTCTCTGGGGAGGGCTaGAAGCCAGTCTCACATAGACAGTTGAAGGAGCCCTCGGTGTTG +
Preference number: 5 (lower is better)
Translates to: AHSSMSTHSPLSGEG*KPVSHRQLKEPSVL
Trigger: CAACACCGAGGGCTCCTTCAACTGTCTATGTGAGACTGGCTTCCAGCCCTCCCCAGAGAGTGGAGAGTGTGTGGACATAGACGAGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556690.5
CDS CCA 90 bp GAGACTCGCTGCTTCCACAATGCCCGGCTCCTGCTGGGGTTTGGGTaGTCGAGGAGTGTGTTGCTACATAGTTTTTGGGTTTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: ETRCFHNARLLLGFG*SRSVLLHSFWVWAW
Trigger: CCACGCCCAAACCCAAAAACTATGTAGCAACACACTCCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCTGCTCCTGCGCAGGTaGGGTGAACGCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHLLLRR*GERSAQ
Trigger: CTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCAG...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAACGGAGGCCAGCTGGTaGGAGAGCGGCAGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPTEASW*ESGSVK
Trigger: TTTCACACTGCCGCTCTCCAACCAGCTGGCCTCCGT...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGAGCTCCAGCAGAGGGTaGGCACACTGTCCGTTCACA +
Preference number: 5 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLSSSRG*AHCPFT
Trigger: TGTGAACGGACAGTGTGCCAACCCTCTGCTGGAGCT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp AAGGACCTCCCTAGGGCAGATGTAGCCTCTGTCCCAGTTGTGGGATCGTCAGGAAGCATGGAGATTGCCTaGTCCGACACACAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: KDLPRADVASVPVVGSSGSMEIA*SDTQRL
Trigger: GAGCCGCTGTGTGTCGGACAAGGCAATCTCCATGCT...TCCTGACGATCCCACAACTGGGACAGAGGCTACATCTGCCCTAGGGAGGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCAAGGAGCCCTCCGTGTaGACGCACTCGCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSKEPSV*THSPFS
Trigger: TGAGAATGGCGAGTGCGTCAACACGGAGGGCTCCTT...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCAAGGAGCCCTCCGTGTaGACGCACTCGCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPKEPSV*THSPFS
Trigger: TGAGAATGGCGAGTGCGTCAACACGGAGGGCTCCTT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCCTCAGGAAGTGAAACAGCTTaGGTGCCCACCTCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: HSFTSTQAMWAASSWKPSGSETA*VPTSSP
Trigger: TGGGGAAGAGGTGGGCACCAAAGCTGTTTCACTTCC...TGAGGGCTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGTGGTGCTGTTTGCTGTaGTCCATCCTGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEWCCLL*SILGST
Trigger: AGTGCTGCCCAGGATGGACAACAGCAAACAGCACCA...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCTGGTGCTGTTTGCTGTaGTCCATCCTGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCWCCLL*SILGST
Trigger: AGTGCTGCCCAGGATGGACAACAGCAAACAGCACCA...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGGCTCGCAAACGGGTTaGATACAGTGGTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCGSQTG*IQWLVL
Trigger: CAGCACCAACCACTGTATCAAACCCGTTTGCGAGCC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAATGCGGAAGCCAGACTaGGGATCGTGCCCATGGCCG +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQMRKPD*GSCPWP
Trigger: CGGCCATGGGCACGATCCCAAGTCTGGCTTCCGCAT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAACACACTCCGCGTCCTaGCACAGGCCCAGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQTHSAS*HRPRVK
Trigger: CTTGACCCTGGGCCTGTGCAAGGACGCGGAGTGTGT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCAGCAGCATATCTGCTaGGTGATCCGCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCQQHIC*VIRWAK
Trigger: TTTGGCCCAGCGGATCACCAAGCAGATATGCTGCTG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTGCTGCTCCTCTGCCCTaGCTCCCTTGGGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: GWSESLLVNSEECLPSFSAAPLP*LPWGPC
Trigger: GCAAGGCCCCCAAGGGAGCAAGGGCAGAGGAGCAGC...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTAAGGAGCCAGCCGTGTaGGTGCAGACTCCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGKEPAV*VQTPEG
Trigger: CCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCTT...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAAAGGAGCCAGCCGTGTaGGTGCAGACTCCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSKEPAV*VQTPEG
Trigger: CCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCTT...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAAGGAGCCAGCCGTGTaGGTGCAGACTCCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPKEPAV*VQTPEG
Trigger: CCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCTT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAATCACACACGGTGCCATaGGCCAGCTGGAAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQSHTVP*ASWKPW
Trigger: CCAGGGCTTCCAGCTGGCCAATGGCACCGTGTGTGA...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGAAGGAGCCATCAGTGTaGTCACAGAAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLKEPSV*SQKPWL
Trigger: CAGCCACGGCTTCTGTGACAACACTGATGGCTCCTT...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAAGGAGCCATCAGTGTaGTCACAGAAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHKEPSV*SQKPWL
Trigger: CAGCCACGGCTTCTGTGACAACACTGATGGCTCCTT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGGGGCATGGTCCCCCGTaGGGGCCTCAGACATACTCT +
Preference number: 5 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQGHGPP*GPQTYS
Trigger: AGAGTATGTCTGAGGCCCCAACGGGGGACCATGCCC...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGAGCGATTGGTGGTGCTaGAGCCAAGCAAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKSDWWC*SQARAW
Trigger: CCATGCCCTTGCTTGGCTCAAGCACCACCAATCGCT...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAACAGACTGTACACCTaGGCTGCAGCCGCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHNRLYT*AAAAAG
Trigger: CCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACCCCTCTCACAGCTGTaGGCACAGTGTCCACGGGCA +
Preference number: 5 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSPLSQL*AQCPRA
Trigger: TGCCCGTGGACACTGTGCCAACAGCTGTGAGAGGGG...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATATGCGGAAGCCAGACTaGGGATCGTGCCCATGGCCG +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHMRKPD*GSCPWP
Trigger: CGGCCATGGGCACGATCCCAAGTCTGGCTTCCGCAT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAACGGAGGCCAGCTGGTaGGAGAGCGGCAGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQTEASW*ESGSVK
Trigger: TTTCACACTGCCGCTCTCCAACCAGCTGGCCTCCGT...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACAGCAGCATATCTGCTaGGTGATCCGCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPQQHIC*VIRWAK
Trigger: TTTGGCCCAGCGGATCACCAAGCAGATATGCTGCTG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCAGCAGCATATCTGCTaGGTGATCCGCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKQQHIC*VIRWAK
Trigger: TTTGGCCCAGCGGATCACCAAGCAGATATGCTGCTG...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATTCTGCCCTTGCTCCCTaGGGGGCCTTGCCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSALAP*GALPVP
Trigger: AGGAACTGGCAAGGCCCCCAAGGGAGCAAGGGCAGA...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGAGTGGAGGGGGTCACTaGTTCTTCCTGTATCTCTGC +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGESGGGH*FFLYLC
Trigger: GCAGAGATACAGGAAGAACAAGTGACCCCCTCCACT...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAGTGGAGGGGGTCACTaGTTCTTCCTGTATCTCTGC +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCSGGGH*FFLYLC
Trigger: GCAGAGATACAGGAAGAACAAGTGACCCCCTCCACT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTCCAGGGCCACAGACGTaGGTGGCTCCAGCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: GWSESLLVNSEECLPSFSPGPQT*VAPAAH
Trigger: ATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTGG...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCAAGGAGCCTTCTAGGTaGGTGCACTTTCCATGGGCA +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCKEPSR*VHFPWA
Trigger: TGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCTT...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTGTGACTGGAGGCCATAAGGAGCCTTCTAGGTaGGTGCACTTTCCATGGGCA +
Preference number: 5 (lower is better)
Translates to: VFPARKSSSRPLPVTGGHKEPSR*VHFPWA
Trigger: TGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCTT...ATGGCCTCCAGTCACAGGCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGAGCCCACAGTGTTCTaGCACTCGCCTCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHEPTVF*HSPPRQ
Trigger: CTGCCTGGGAGGCGAGTGCAAGAACACTGTGGGCTC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GAGCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCGTCTCACATAGACAGTaGAAGGAGCCCTCGGTGTTG +
Preference number: 5 (lower is better)
Translates to: EPSKGMEAMTEAYSQRLSVSHRQ*KEPSVL
Trigger: CAACACCGAGGGCTCCTTCAACTGTCTATGTGAGAC...GCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGCCACACATGGTGTCGTaGGCGCACTCGTCTATGTCA +
Preference number: 5 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKPHMVS*AHSSMS
Trigger: TGACATAGACGAGTGCGCCAACGACACCATGTGTGG...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTGGGCATGGTCCCCCGTaGGGGCCTCAGACATACTCT +
Preference number: 5 (lower is better)
Translates to: LLVPTGYHWADSATEYFLGHGPP*GPQTYS
Trigger: AGAGTATGTCTGAGGCCCCAACGGGGGACCATGCCC...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATGGGCATGGTCCCCCGTaGGGGCCTCAGACATACTCT +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHGHGPP*GPQTYS
Trigger: AGAGTATGTCTGAGGCCCCAACGGGGGACCATGCCC...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGATCTTCTGCCACTCCTaGGGGTCAGAGAATGGGCTA +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEIFCHS*GSENGL
Trigger: TAGCCCATTCTCTGACCCCAAGGAGTGGCAGAAGAT...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp CTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCACCTCTTCCCCAGTTTaGCAGCAACACAGACCTGGA +
Preference number: 5 (lower is better)
Translates to: LWPDVTVSSQLGNHPQGPTSSPV*QQHRPG
Trigger: TCCAGGTCTGTGTTGCTGCAAAACTGGGGAAGAGGT...GGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS CCA 90 bp TCACACTCGTCAATATCCACACACTCTCCACTCTCTGGGGAGGGCTaGAAGCCAGTCTCACATAGACAGTTGAAGGAGCCCTCGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SHSSISTHSPLSGEG*KPVSHRQLKEPSVL
Trigger: CAACACCGAGGGCTCCTTCAACTGTCTATGTGAGACTGGCTTCCAGCCCTCCCCAGAGAGTGGAGAGTGTGTGGATATTGACGAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp CCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCTTGGTGCTGTTTGCTGTaGTCCATCCTGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: PILYLSTLSPSPQTTIGSWCCLL*SILGST
Trigger: AGTGCTGCCCAGGATGGACAACAGCAAACAGCACCA...AGAACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTACGGAGGCCAGCTGGTaGGAGAGCGGCAGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPTEASW*ESGSVK
Trigger: TTTCACACTGCCGCTCTCCAACCAGCTGGCCTCCGT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TCCCAATCCTGTACCTATCCACCCTGTCACCCTCCCCACAAACCACCATTGGTTCCACACATGGTGTCGTaGGCGCACTCGTCTATGTCA +
Preference number: 5 (lower is better)
Translates to: SQSCTYPPCHPPHKPPLVPHMVS*AHSSMS
Trigger: TGACATAGACGAGTGCGCCAACGACACCATGTGTGG...AACCAATGGTGGTTTGTGGGGAGGGTGACAGGGTGGATAGGTACAGGATTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGAAGGAGCCCTCCGTGTaGACGCACTCGCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGKEPSV*THSPFS
Trigger: TGAGAATGGCGAGTGCGTCAACACGGAGGGCTCCTT...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGAACTCCCAGCTAGTTaGGGTTGGAGTGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPELPAS*GWSESL
Trigger: CAGAGACTCACTCCAACCCAAACTAGCTGGGAGTTC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp CAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGAGAGGCCAGCAGGATATATTaGGGGGATGGTAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QGHGGNDRSLQPEAKLGEASRIY*GDGKFS
Trigger: GGAGAACTTACCATCCCCCAAATATATCCTGCTGGC...CTCTCCCAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAACCACACATGGTGTCGTaGGCGCACTCGTCTATGTCC +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQPHMVS*AHSSMS
Trigger: GGACATAGACGAGTGCGCCAACGACACCATGTGTGG...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556690.5
CDS-3UTR CAA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGGTTTGATACAGTGGTaGGTGCTGTTTGCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLGLIQW*VLFAVV
Trigger: GACAACAGCAAACAGCACCAACCACTGTATCAAACC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAAGCTCCAGCAGAGGGTaGGCACACTGTCCGTTCACA +
Preference number: 5 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSSSSRG*AHCPFT
Trigger: TGTGAACGGACAGTGTGCCAACCCTCTGCTGGAGCT...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAGCTCCAGCAGAGGGTaGGCACACTGTCCGTTCACA +
Preference number: 5 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPSSSRG*AHCPFT
Trigger: TGTGAACGGACAGTGTGCCAACCCTCTGCTGGAGCT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCAAGGCTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAGCACTCGTTGATATCTaGGCAGTGAGTGAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: ARLIGNLWPDVTVSSQLGALVDI*AVSEVQ
Trigger: CTGAACCTCACTCACTGCCAAGATATCAACGAGTGC...TCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAGCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAAGCATGGAGATTGCCTaGTCCGACACACAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSSMEIA*SDTQRL
Trigger: GAGCCGCTGTGTGTCGGACAAGGCAATCTCCATGCT...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATAGCATGGAGATTGCCTaGTCCGACACACAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHSMEIA*SDTQRL
Trigger: GAGCCGCTGTGTGTCGGACAAGGCAATCTCCATGCT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCCAAGCAAGGGCATGGAGGCAATGACCGAAGCTTACAGCCAGAGGCTAAGCTGGCATTCGTTGATATCTaGGCAGTGTCCTTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: AKQGHGGNDRSLQPEAKLAFVDI*AVSFPD
Trigger: GTCAGGAAAGGACACTGCCAAGATATCAACGAATGC...CAGCTTAGCCTCTGGCTGTAAGCTTCGGTCATTGCCTCCATGCCCTTGCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCGCATTCGTTGATATCTaGGCAGTGTCCTTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCAFVDI*AVSFPD
Trigger: GTCAGGAAAGGACACTGCCAAGATATCAACGAATGC...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGAAGGAGCCATCAGTGTaGTCACAGAAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGKEPSV*SQKPWL
Trigger: CAGCCACGGCTTCTGTGACAACACTGATGGCTCCTT...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TCATCACACTCATTCACATCTACGCAGGCCATGTGGGCCGCATCCAGCTGGAAGGAAGCATTAAAGCGATaGGTGGTGCTTGAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: SSHSFTSTQAMWAASSWKEALKR*VVLEPS
Trigger: GCTTGGCTCAAGCACCACCAATCGCTTTAATGCTTC...CTTCCAGCTGGATGCGGCCCACATGGCCTGCGTAGATGTGAATGAGTGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp ACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATCTACGCAGCAGGATGATGGTGGATaGTGGCTGGAAAGGGGTGTC +
Preference number: 5 (lower is better)
Translates to: TQSTAGPFKSSHSFTSTQQDDGG*WLERGV
Trigger: GACACCCCTTTCCAGCCACAATCCACCATCATCCTG...CTGCGTAGATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp TGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGCCCCTGCCTATTTCCCACATGCTaGCCAGCTAGGAGTCTTAAC +
Preference number: 5 (lower is better)
Translates to: WPDVTVSSQLGNHPQGPCLFPTC*PARSLN
Trigger: GTTAAGACTCCTAGCTGGCAAGCATGTGGGAAATAG...GCAGGGGCCTTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGGTTTGATACAGTGGTaGGTGCTGTTTGCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPGLIQW*VLFAVV
Trigger: GACAACAGCAAACAGCACCAACCACTGTATCAAACC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp AACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCACATGGCTCGCAAACGGGTTaGATACAGTGGTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: NHGHRAQQARSSHHTHSHGSQTG*IQWLVL
Trigger: CAGCACCAACCACTGTATCAAACCCGTTTGCGAGCC...ATGTGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp TTTGGTAAGCATCCCATAGCAAGGCCAGGAAAGGTGGTGGACAGGGCCTCATGCGCATTCGTTGATATCTaGGCAGTGTCCTTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: FGKHPIARPGKVVDRASCAFVDI*AVSFPD
Trigger: GTCAGGAAAGGACACTGCCAAGATATCAACGAATGC...GCATGAGGCCCTGTCCACCACCTTTCCTGGCCTTGCTATGGGATGCTTACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGTCTCACATAGACAGTaGAAGGAGCCCTCGGTGTTG +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQVSHRQ*KEPSVL
Trigger: CAACACCGAGGGCTCCTTCAACTGTCTATGTGAGAC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTAGCGATTGGTGGTGCTaGAGCCAAGCAAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: GWSESLLVNSEECLPSFSSDWWC*SQARAW
Trigger: CCATGCCCTTGCTTGGCTCAAGCACCACCAATCGCT...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp CTGCTGGTGCCCACAGGCTATCACTGGGCGGATTCAGCTACTGAATATTTTCTTAAGGAGCCTTCTAGGTaGGTGCACTTTCCATGGGCA +
Preference number: 5 (lower is better)
Translates to: LLVPTGYHWADSATEYFLKEPSR*VHFPWA
Trigger: TGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCTT...AAGAAAATATTCAGTAGCTGAATCCGCCCAGTGATAGCCTGTGGGCACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGTCTCACATAGACAGTaGAAGGAGCCCTCGGTGTTG +
Preference number: 5 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPVSHRQ*KEPSVL
Trigger: CAACACCGAGGGCTCCTTCAACTGTCTATGTGAGAC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGAAGCATTAAAGCGATaGGTGGTGCTTGAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQEALKR*VVLEPS
Trigger: GCTTGGCTCAAGCACCACCAATCGCTTTAATGCTTC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp GGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTCAAGGTTTGATACAGTGGTaGGTGCTGTTTGCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: GNLWPDVTVSSQLGNHPQGLIQW*VLFAVV
Trigger: GACAACAGCAAACAGCACCAACCACTGTATCAAACC...TTGAGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCAGGAGTGAAGACGATCTaGATCTTCTTGATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPGVKTI*IFLIFS
Trigger: GGAGAAAATCAAGAAGATCAAGATCGTCTTCACTCC...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS-3UTR CAA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGCGGGCACAGGTCTGCTaGCAGATGGTGGGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKRAQVC*QMVGVK
Trigger: CTTCACTCCCACCATCTGCAAGCAGACCTGTGCCCG...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAGCACTCGTTGATATCTaGGCAGTGAGTGAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSALVDI*AVSEVQ
Trigger: CTGAACCTCACTCACTGCCAAGATATCAACGAGTGC...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp AGTAACCATGGACACAGAGCACAGCAGGCCCGTTCAAGTCATCACACTCATTCAACACTCATTGATATCTaGACACTCCTGTGTCGCCCC +
Preference number: 5 (lower is better)
Translates to: SNHGHRAQQARSSHHTHSTLIDI*TLLCRP
Trigger: GGGGCGACACAGGAGTGTCAAGATATCAATGAGTGT...TGAATGAGTGTGATGACTTGAACGGGCCTGCTGTGCTCTGTGTCCATGGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATACACTCATTGATATCTaGACACTCCTGTGTCGCCCC +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHTLIDI*TLLCRP
Trigger: GGGGCGACACAGGAGTGTCAAGATATCAATGAGTGT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp AAGAGTCATTTCCCATTGGAACCCATCATAGGCTATCAGCAGAGCTGGCCAGGGGATCCCAGAAGAGGTTaGTTTCCTGTAAGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: KSHFPLEPIIGYQQSWPGDPRRG*FPVRSS
Trigger: ACTGCTTCTTACAGGAAACAAACCTCTTCTGGGATC...CCCTGGCCAGCTCTGCTGATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAGAGCCCACAGTGTTCTaGCACTCGCCTCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: FTLPFIREVRSQSFPCLLEPTVF*HSPPRQ
Trigger: CTGCCTGGGAGGCGAGTGCAAGAACACTGTGGGCTC...TAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGCAATGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp ACAGGGCCTCATGCGGTGGCTGAAGCATTAAAGCGATTGGTGGTGCTTGAGCCACCTTGTTCATTTACATaGCCATTCATCAGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: TGPHAVAEALKRLVVLEPPCSFT*PFIREV
Trigger: TACTTCTCTGATGAATGGCAATGTAAATGAACAAGG...TGGCTCAAGCACCACCAATCGCTTTAATGCTTCAGCCACCGCATGAGGCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAGGCTCGCAAACGGGTTaGATACAGTGGTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSGSQTG*IQWLVL
Trigger: CAGCACCAACCACTGTATCAAACCCGTTTGCGAGCC...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp CTGATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATACGATCTTGATCTTCTaGATTTTCTCCGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LIGNLWPDVTVSSQLGNHTILIF*IFSVRF
Trigger: GAACCTCACGGAGAAAATCAAGAAGATCAAGATCGT...ATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp TGGGAACAGCAGTTACGAAGGTGTAGTGCCAGCAGGATATATTTGGGGGATGGTGGAGTGAAGACGATCTaGATCTTCTTGATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: WEQQLRRCSASRIYLGDGGVKTI*IFLIFS
Trigger: GGAGAAAATCAAGAAGATCAAGATCGTCTTCACTCC...ACCATCCCCCAAATATATCCTGCTGGCACTACACCTTCGTAACTGCTGTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTGGAGTGAAGACGATCTaGATCTTCTTGATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPGVKTI*IFLIFS
Trigger: GGAGAAAATCAAGAAGATCAAGATCGTCTTCACTCC...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS-3UTR CAA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAACGAGCAGGGATGTTGTaGCTGTCCCAGAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKRAGML*LSQRLW
Trigger: CCACAGCCTCTGGGACAGCAACAACATCCCTGCTCG...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCACAGGATGATGGTGGATaGTGGCTGGAAAGGGGTGTC +
Preference number: 5 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSQDDGG*WLERGV
Trigger: GACACCCCTTTCCAGCCACAATCCACCATCATCCTG...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp ATTGGAAACCTCTGGCCTGATGTCACGGTGTCTTCCCAGCTAGGAAATCATCCTAAGAGTCATTTCCCATaGGAACCCATCATAGGCTAT +
Preference number: 5 (lower is better)
Translates to: IGNLWPDVTVSSQLGNHPKSHFP*EPIIGY
Trigger: ATAGCCTATGATGGGTTCCAATGGGAAATGACTCTT...AGGATGATTTCCTAGCTGGGAAGACACCGTGACATCAGGCCAGAGGTTTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp CAGTCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGGCACTCGTTGATATCTaGGCAGTGAGTGAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: QSHGALFIYIAIHQRSTKALVDI*AVSEVQ
Trigger: CTGAACCTCACTCACTGCCAAGATATCAACGAGTGC...CTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp GGTTGGAGTGAGTCTCTGCTTGTAAACTCAGAGGAATGCCTGCCATCGTTTTCTCAGTCACATGGAGCCTaGTTCATTTACATTGCCATT +
Preference number: 5 (lower is better)
Translates to: GWSESLLVNSEECLPSFSQSHGA*FIYIAI
Trigger: AATGGCAATGTAAATGAACAAGGCTCCATGTGACTG...AGAAAACGATGGCAGGCATTCCTCTGAGTTTACAAGCAGAGACTCACTCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCAACACTCATTGATATCTaGACACTCCTGTGTCGCCCC +
Preference number: 5 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSTLIDI*TLLCRP
Trigger: GGGGCGACACAGGAGTGTCAAGATATCAATGAGTGT...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp TCACATGGAGCCTTGTTCATTTACATTGCCATTCATCAGAGAAGTACGAAGTCATACAATATCTCAAGGTaGGCAGGAAGGTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: SHGALFIYIAIHQRSTKSYNISR*AGRWRL
Trigger: CAATCTCCACCTTCCTGCCAACCTTGAGATATTGTA...TGACTTCGTACTTCTCTGATGAATGGCAATGTAAATGAACAAGGCTCCATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAACGATCTTGATCTTCTaGATTTTCTCCGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKTILIF*IFSVRF
Trigger: GAACCTCACGGAGAAAATCAAGAAGATCAAGATCGT...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS-3UTR CAA 90 bp GCCATTCATCAGAGAAGTACGAAGTCAGAGCTTTCCTTGTCTTTTAATAGTAAAGCTTTCTCAGGCTCTTaGTTCTTCTTCATTTGTGTC +
Preference number: 5 (lower is better)
Translates to: AIHQRSTKSELSLSFNSKAFSGS*FFFICV
Trigger: GACACAAATGAAGAAGAACAAAGAGCCTGAGAAAGC...TTTACTATTAAAAGACAAGGAAAGCTCTGACTTCGTACTTCTCTGATGAATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261978.9
CDS GCA 72 bp CGGGTCTGCGCAGGTGGCTGGACACGCCGCGACTGCTaGGCGCGGGACGGCCTCCTGGCCTCCGCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: RVCAGGWTRRDC*ARDGLLASASV
Trigger: CACCGAGGCGGAGGCCAGGAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CTCCGGGTCTGCGCAGGTGGCTGGACACGCCGCGACTaGTGCGCGCGGGACGGCCTCCTGGCCTCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: LRVCAGGWTRRD*CARDGLLASAS
Trigger: CGAGGCGGAGGCCAGGAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GCGCGGGCACCGCGAAGAGCTTTGTGGTCGGCACGCTaGACGCCCGCGGGCTGTTCTCCCGGCCCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: ARAPRRALWSAR*TPAGCSPGPAR
Trigger: CCGGGCGGGGCCGGGAGAACAGCCCGCGGGCGTCCAGCGTGCCGACCACAAAGCTCTTCGCGGTGCCCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CAGGCGTGGGAGAGCCGGCGCGGCCCGGGTCCGGGGTaGTGGTTGCTGCTGGCCCAGGGGAGTGCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: QAWESRRGPGPG*WLLLAQGSASP
Trigger: CGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCCGCGCCGGCTCTCCCACGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GCCGGCGCGGCCCGGGTCCGGGGTGCTGGTTGCTGCTaGCCCAGGGGAGTGCTTCTCCGGGTCTGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: AGAARVRGAGCC*PRGVLLRVCAG
Trigger: ACCTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCCGCGCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GCGTGGGAGAGCCGGCGCGGCCCGGGTCCGGGGTGCTaGTTGCTGCTGGCCCAGGGGAGTGCTTCTCCGGGT +
Preference number: 6 (lower is better)
Translates to: AWESRRGPGPGC*LLLAQGSASPG
Trigger: ACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCGGACCCGGGCCGCGCCGGCTCTCCCACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CCCAGGGGAGTGCTTCTCCGGGTCTGCGCAGGTGGCTaGACACGCCGCGACTGCTGCGCGCGGGACGGCCTC +
Preference number: 6 (lower is better)
Translates to: PRGVLLRVCAGG*TRRDCCARDGL
Trigger: GAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCACTCCCCTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp TCCGCGGCCTCATGGCGCGGGGCGGCTGGAGAGTGGTaGGCGCGGGCACCGCGAAGAGCTTTGTGGTCGGCA +
Preference number: 6 (lower is better)
Translates to: SAASWRGAAGEW*ARAPRRALWSA
Trigger: TGCCGACCACAAAGCTCTTCGCGGTGCCCGCGCGCACCACTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GCCTCAAGCCAGGTGTCCGTGACGACCCGGAGGGGCTaGCTCTCTGCTGGCCCGGGCAGTGCCCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: ASSQVSVTTRRG*LSAGPGSAPLL
Trigger: GAGCAGCGGGGCACTGCCCGGGCCAGCAGAGAGGCAGCCCCTCCGGGTCGTCACGGACACCTGGCTTGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GCGCCCCGAGCCTCGAGTCCGCGCTCCTACTCCAGCTaGGCTCGCACGGCTGCTGCACCTTCGCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: APRASSPRSYSS*ARTAAAPSRLL
Trigger: GAGGAGGCGCGAAGGTGCAGCAGCCGTGCGAGCCCAGCTGGAGTAGGAGCGCGGACTCGAGGCTCGGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000553939.5
CDS CCA 72 bp GCTTCTCTGAGTCTAGGGGGCCCTGAAGCGGCCGACTaGGGGCCCGGCTCTCGGCGGAACGAGGGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: ASLSLGGPEAAD*GPGSRRNEGCA
Trigger: CGCGCAGCCCTCGTTCCGCCGAGAGCCGGGCCCCCAGTCGGCCGCTTCAGGGCCCCCTAGACTCAGAGAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000557425.1
CDS CCA 72 bp TGGTCCGCGGCCTCATGGCGCGGGGCGGCTGGAGAGTaGTGCGCGCGGGCACCGCGAAGAGCTTTGTGGTCG +
Preference number: 6 (lower is better)
Translates to: WSAASWRGAAGE*CARAPRRALWS
Trigger: CGACCACAAAGCTCTTCGCGGTGCCCGCGCGCACCACTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CGGGCTTTGGTCCGCGGCCTCATGGCGCGGGGCGGCTaGAGAGTGGTGCGCGCGGGCACCGCGAAGAGCTTT +
Preference number: 6 (lower is better)
Translates to: RALVRGLMARGG*RVVRAGTAKSF
Trigger: AAAGCTCTTCGCGGTGCCCGCGCGCACCACTCTCCAGCCGCCCCGCGCCATGAGGCCGCGGACCAAAGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GGTTGCTGCTGGCCCAGGGGAGTGCTTCTCCGGGTCTaGGCAGGTGGCTGGACACGCCGCGACTGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: GCCWPRGVLLRV*AGGWTRRDCCA
Trigger: CGCGCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GGGTCCGGGGTGCTGGTTGCTGCTGGCCCAGGGGAGTaGTTCTCCGGGTCTGCGCAGGTGGCTGGACACGCC +
Preference number: 6 (lower is better)
Translates to: GSGVLVAAGPGE*FSGSAQVAGHA
Trigger: GGCGTGTCCAGCCACCTGCGCAGACCCGGAGAAGCACTCCCCTGGGCCAGCAGCAACCAGCACCCCGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CGGGCTCCACGGAAACCAGAGCGGCAGACACAGAGCTaGGGGCGGCTGCAGGAGCCCCGGTTCTGGCACGGC +
Preference number: 6 (lower is better)
Translates to: RAPRKPERQTQS*GRLQEPRFWHG
Trigger: GCCGTGCCAGAACCGGGGCTCCTGCAGCCGCCCGCAGCTCTGTGTCTGCCGCTCTGGTTTCCGTGGAGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CCCAGCTGGTGGCGACTGTGGTGCGGGCGGCGACTGTaGTGCTGGCGGCTGTGCTCTGGCCAAGGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: PSWWRLWCGRRL*CWRLCSGQGAL
Trigger: GAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCACCACAGTCGCCACCAGCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GCTGAGGCCACTCAGGGTCCCAGCTGGTGGCGACTGTaGTGCGGGCGGCGACTGTGGTGCTGGCGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: AEATQGPSWWRL*CGRRLWCWRLC
Trigger: GCACAGCCGCCAGCACCACAGTCGCCGCCCGCACCACAGTCGCCACCAGCTGGGACCCTGAGTGGCCTCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp GCCCTCTCCAGCCGCACTGCTCCTGCGCAGGTTGGGTaGACGCTCGGCCCAGCGTCGAGGTGCCAGCCTGGA +
Preference number: 6 (lower is better)
Translates to: ALSSRTAPAQVG*TLGPASRCQPG
Trigger: TCCAGGCTGGCACCTCGACGCTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp AGCTGGTGGCGACTGTGGTGCGGGCGGCGACTGTGGTaGTGGCGGCTGTGCTCTGGCCAAGGTGCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SWWRLWCGRRLW*WRLCSGQGALS
Trigger: GGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCACCACAGTCGCCACCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp TGGTGGCGACTGTGGTGCGGGCGGCGACTGTGGTGCTaGCGGCTGTGCTCTGGCCAAGGTGCCCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: WWRLWCGRRLWC*RLCSGQGALSS
Trigger: GCTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCACAGTCGCCGCCCGCACCACAGTCGCCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GTGCAGGTCATCGGGCCCGGGGCCATACTCATAGCCTaGCCGGAAGTGGACCCCGGCCTCCCGCTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VQVIGPGAILIA*PEVDPGLPLCL
Trigger: GAGGCAGAGCGGGAGGCCGGGGTCCACTTCCGGCCAGGCTATGAGTATGGCCCCGGGCCCGATGACCTGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 72 bp GCTGGAGAGTGGTGCGCGCGGGCACCGCGAAGAGCTTaGTGGTCGGCACGCTGGACGCCCGCGGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: AGEWCARAPRRA*WSARWTPAGCS
Trigger: AGAACAGCCCGCGGGCGTCCAGCGTGCCGACCACAAAGCTCTTCGCGGTGCCCGCGCGCACCACTCTCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp GCCGGCTCGTATCTCCCTACGGGGTCCCTTTGGGCATaGCCCGCGCCCACGAAGAGAGCCAGGGTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: AGSYLPTGSLWA*PAPTKRARVSG
Trigger: GCCGCTCACCCTGGCTCTCTTCGTGGGCGCGGGTCATGCCCAAAGGGACCCCGTAGGGAGATACGAGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GACTGTACACCTTGGCTGCAGCCGCTGCCGGGTAGCTaGCCCCAGGGCGCCGCAGTCGATTCGCGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: DCTPWLQPLPGS*PQGAAVDSRLH
Trigger: GTGGAGACGCGAATCGACTGCGGCGCCCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CGCTCCACGGGCTGCAAGCCCGCGACAGGCGCGTCCTaGTCCCGGAACAGACTGTACACCTTGGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: RSTGCKPATGAS*SRNRLYTLAAA
Trigger: GGCTGCAGCCAAGGTGTACAGTCTGTTCCGGGAGCAGGACGCGCCTGTCGCGGGCTTGCAGCCCGTGGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GGAAACCAGAGCGGCAGACACAGAGCTGCGGGCGGCTaGAGGAGCCCCGGTTCTGGCACGGCGGCTCGCAAA +
Preference number: 6 (lower is better)
Translates to: GNQSGRHRAAGG*RSPGSGTAARK
Trigger: TTTGCGAGCCGCCGTGCCAGAACCGGGGCTCCTGCAGCCGCCCGCAGCTCTGTGTCTGCCGCTCTGGTTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GCTGTGCTCTGGCCAAGGTGCCCTCTCCAGCCGCACTaGTCCTGCGCAGGTTGGGTGAACGCTCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: AVLWPRCPLQPH*SCAGWVNARPS
Trigger: GCTGGGCCGAGCGTTCACCCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCACAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GCGACTGTGGTGCTGGCGGCTGTGCTCTGGCCAAGGTaGCCTCTCCAGCCGCACTGCTCCTGCGCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: ATVVLAAVLWPR*PLQPHCSCAGW
Trigger: CCAACCTGCGCAGGAGCAGTGCGGCTGGAGAGGGCACCTTGGCCAGAGCACAGCCGCCAGCACCACAGTCGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GTCCCGGGGGCAGGGCGTTGGAAGAGAGCTGGCTACTaGCCGTGGCAGTCGGGTGAAGTCGGACAGTGCGGG +
Preference number: 6 (lower is better)
Translates to: VPGAGRWKRAGY*PWQSGEVGQCG
Trigger: CCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGCCCTGCCCCCGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CCTGGAGGCTCCCTGTCCGGCTGCGGGATAGGCAGGTaGCAGAACTTCCCGGTGGAGTTGGCGGGGCACCAG +
Preference number: 6 (lower is better)
Translates to: PGGSLSGCGIGR*QNFPVELAGHQ
Trigger: CTGGTGCCCCGCCAACTCCACCGGGAAGTTCTGCCACCTGCCTATCCCGCAGCCGGACAGGGAGCCTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp TTTGGGCATGACCCGCGCCCACGAAGAGAGCCAGGGTaGGCGGCAGGAAGCCTCTCCAGGGGTTCCGCAGGG +
Preference number: 6 (lower is better)
Translates to: FGHDPRPRREPG*AAGSLSRGSAG
Trigger: CCCTGCGGAACCCCTGGAGAGGCTTCCTGCCGCTCACCCTGGCTCTCTTCGTGGGCGCGGGTCATGCCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CTCCCGGAACAGACTGTACACCTTGGCTGCAGCCGCTaGCGGGTAGCTGCCCCCAGGGCGCCGCAGTCGATT +
Preference number: 6 (lower is better)
Translates to: LPEQTVHLGCSR*RVAAPRAPQSI
Trigger: AATCGACTGCGGCGCCCTGGGGGCAGCTACCCGGCAGCGGCTGCAGCCAAGGTGTACAGTCTGTTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GGCTACTGGCCGTGGCAGTCGGGTGAAGTCGGACAGTaGGGGACAACCCCACGTGCTGCTGGGAAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GYWPWQSGEVGQ*GTTPRAAGKGG
Trigger: CCCACCCTTCCCAGCAGCACGTGGGGTTGTCCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp TCCCGGTGGAGTTGGCGGGGCACCAGCATTCGTCCCTaGCGATGCAGCGGCCTCCGTTCAGGCAGGGGATCT +
Preference number: 6 (lower is better)
Translates to: SRWSWRGTSIRP*RCSGLRSGRGS
Trigger: AGATCCCCTGCCTGAACGGAGGCCGCTGCATCGGCAGGGACGAATGCTGGTGCCCCGCCAACTCCACCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CCAGGGGGCTGGGCCGGTAGCCCCCATCGCAGTCCTTaGAGGAGAAGGAGCCAGCCGTGTTGGTGCAGACTC +
Preference number: 6 (lower is better)
Translates to: PGGWAGSPHRSP*RRRSQPCWCRL
Trigger: GAGTCTGCACCAACACGGCTGGCTCCTTCTCCTGCAAGGACTGCGATGGGGGCTACCGGCCCAGCCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
ENST00000556690.5
CDS CAA 90 bp ATTCGCGTCTCCACCAGCCGGCTCGTATCTCCCTACGGGGTCCCTTaGGGCATGACCCGCGCCCACGAAGAGAGCCAGGGTGAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: IRVSTSRLVSPYGVP*GMTRAHEESQGERQ
Trigger: CTGCCGCTCACCCTGGCTCTCTTCGTGGGCGCGGGTCATGCCCAAAGGGACCCCGTAGGGAGATACGAGCCGGCTGGTGGAGACGCGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp CAGGCGCGCACAGACAGAAGAAAGACCCGTGGCTGTTaGGGCACTCGCCGTGGGGTGCGCAGTGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: QARTDRRKTRGC*GTRRGVRSAPP
Trigger: GGGAGGAGCACTGCGCACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTTTCTTCTGTCTGTGCGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
ENST00000556690.5
CDS GCA 72 bp GGGATGAGGGGTGCTCCAGAGGTACCGCCTGTTGGGTaGCATCTCTCTGCTCAAGGCCTGGTCCCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: GMRGAPEVPPVG*HLSAQGLVPGA
Trigger: TGCCCCCGGGACCAGGCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTGGAGCACCCCTCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp TGGAGTTGGCGGGGCACCAGCATTCGTCCCTGCCGATaGAGCGGCCTCCGTTCAGGCAGGGGATCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: WSWRGTSIRPCR*SGLRSGRGSGR
Trigger: TCTGCCAGATCCCCTGCCTGAACGGAGGCCGCTGCATCGGCAGGGACGAATGCTGGTGCCCCGCCAACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CGCAGTCCTTGCAGGAGAAGGAGCCAGCCGTGTTGGTaGAGACTCCGGAGGGGCAGACTCCCGGGAAGGCAC +
Preference number: 6 (lower is better)
Translates to: RSPCRRRSQPCW*RLRRGRLPGRH
Trigger: GTGCCTTCCCGGGAGTCTGCCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCTTCTCCTGCAAGGACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
ENST00000556690.5
CDS GCA 72 bp CCCCGGCCTCCCGCTCTGCCTCAATGCGAGCCACGTTaGACAGCTGAGCATAGACCTCAGAGCTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: PRPPALPQCEPR*TAEHRPQSSSG
Trigger: CCCCGAGGAGCTCTGAGGTCTATGCTCAGCTGTGCAACGTGGCTCGCATTGAGGCAGAGCGGGAGGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GGGGCAGGGCGTTGGAAGAGAGCTGGCTACTGGCCGTaGCAGTCGGGTGAAGTCGGACAGTGCGGGACAACC +
Preference number: 6 (lower is better)
Translates to: GAGRWKRAGYWP*QSGEVGQCGTT
Trigger: GGTTGTCCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTTCCAACGCCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CAGGGGGATGAGGGGTGCTCCAGAGGTACCGCCTGTTaGGTGCCATCTCTCTGCTCAAGGCCTGGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: QGDEGCSRGTAC*VPSLCSRPGPG
Trigger: CCCGGGACCAGGCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTGGAGCACCCCTCATCCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CGGAAGCCAGACTTGGGATCGTGCCCATGGCCGCCCTaGCTGTACAGGGTGGTGGTGTCGCCCCTCTCACAG +
Preference number: 6 (lower is better)
Translates to: RKPDLGSCPWPP*LYRVVVSPLSQ
Trigger: CTGTGAGAGGGGCGACACCACCACCCTGTACAGCCAGGGCGGCCATGGGCACGATCCCAAGTCTGGCTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp AGGCCTCGCCGTCCTGGCAGCAGCATTCCGTGTAGGTaGTGCGGTGCCCACGCAGGGGTTCGCTGCACACAT +
Preference number: 6 (lower is better)
Translates to: RPRRPGSSIPCR*CGAHAGVRCTH
Trigger: ATGTGTGCAGCGAACCCCTGCGTGGGCACCGCACCACCTACACGGAATGCTGCTGCCAGGACGGCGAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 72 bp TCCACCAGCCGGCTCGTATCTCCCTACGGGGTCCCTTaGGGCATGACCCGCGCCCACGAAGAGAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: STSRLVSPYGVP*GMTRAHEESQG
Trigger: ACCCTGGCTCTCTTCGTGGGCGCGGGTCATGCCCAAAGGGACCCCGTAGGGAGATACGAGCCGGCTGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 72 bp CCAGGCGCGCACAGACAGAAGAAAGACCCGTGGCTGTaGAGGCACTCGCCGTGGGGTGCGCAGTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PGAHRQKKDPWL*RHSPWGAQCSS
Trigger: GGAGGAGCACTGCGCACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTTTCTTCTGTCTGTGCGCGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
ENST00000556690.5
CDS CAA 90 bp CTGACGAAGCCAGGCGCGCACAGACAGAAGAAAGACCCGTGGCTGTaGAGGCACTCGCCGTGGGGTGCGCAGTGCTCCTCCCCCATGCAC +
Preference number: 6 (lower is better)
Translates to: LTKPGAHRQKKDPWL*RHSPWGAQCSSPMH
Trigger: GTGCATGGGGGAGGAGCACTGCGCACCCCACGGCGAGTGCCTCAACAGCCACGGGTCTTTCTTCTGTCTGTGCGCGCCTGGCTTCGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
ENST00000556690.5
CDS TCA 72 bp CGGGATTGCACAGGCAGACATAACCAGGCACGGTGTTaGGGCACCGGCCGTTCGGGCAGAGACCAGGCCCGA +
Preference number: 6 (lower is better)
Translates to: RDCTGRHNQARC*GTGRSGRDQAR
Trigger: TCGGGCCTGGTCTCTGCCCGAACGGCCGGTGCCTCAACACCGTGCCTGGTTATGTCTGCCTGTGCAATCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp TGCTCCAGAGGTACCGCCTGTTGGGTGCCATCTCTCTaGTCAAGGCCTGGTCCCGGGGGCAGGGCGTTGGAA +
Preference number: 6 (lower is better)
Translates to: CSRGTACWVPSL*SRPGPGGRALE
Trigger: TTCCAACGCCCTGCCCCCGGGACCAGGCCTTGAGCAGAGAGATGGCACCCAACAGGCGGTACCTCTGGAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp CCTCGCCGTCCTGGCAGCAGCATTCCGTGTAGGTGGTaGGGTGCCCACGCAGGGGTTCGCTGCACACATCAT +
Preference number: 6 (lower is better)
Translates to: PRRPGSSIPCRW*GAHAGVRCTHH
Trigger: ATGATGTGTGCAGCGAACCCCTGCGTGGGCACCGCACCACCTACACGGAATGCTGCTGCCAGGACGGCGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GATCGTGCCCATGGCCGCCCTGGCTGTACAGGGTGGTaGTGTCGCCCCTCTCACAGCTGTTGGCACAGTGTC +
Preference number: 6 (lower is better)
Translates to: DRAHGRPGCTGW*CRPSHSCWHSV
Trigger: GACACTGTGCCAACAGCTGTGAGAGGGGCGACACCACCACCCTGTACAGCCAGGGCGGCCATGGGCACGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp AGCATTCAGCCTGTGTGGTGTTCCGGCCCAGGACACTaGAGCAGGGCGCATGGCCCTTCTGCCCGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: SIQPVWCSGPGH*SRAHGPSARSS
Trigger: GCTACTCCGGGCAGAAGGGCCATGCGCCCTGCTCCAGTGTCCTGGGCCGGAACACCACACAGGCTGAATGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GGGCAGAGGTCACAGGCATCTCCCCAGCTAGCGCCCTaGGTGCAGCAGCATTCAGCCTGTGTGGTGTTCCGG +
Preference number: 6 (lower is better)
Translates to: GQRSQASPQLAP*VQQHSACVVFR
Trigger: CCGGAACACCACACAGGCTGAATGCTGCTGCACCCAGGGCGCTAGCTGGGGAGATGCCTGTGACCTCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 72 bp CCATCGCAGTCCTTGCAGGAGAAGGAGCCAGCCGTGTaGGTGCAGACTCCGGAGGGGCAGACTCCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: PSQSLQEKEPAV*VQTPEGQTPGK
Trigger: CTTCCCGGGAGTCTGCCCCTCCGGAGTCTGCACCAACACGGCTGGCTCCTTCTCCTGCAAGGACTGCGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
ENST00000556690.5
CDS TCA 72 bp TTGGAAGAGAGCTGGCTACTGGCCGTGGCAGTCGGGTaGAGTCGGACAGTGCGGGACAACCCCACGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LEESWLLAVAVG*SRTVRDNPTCC
Trigger: GCAGCACGTGGGGTTGTCCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCCAGCTCTCTTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp ATAGCCTGGCCGGAAGTGGACCCCGGCCTCCCGCTCTaGCTCAATGCGAGCCACGTTGCACAGCTGAGCATA +
Preference number: 6 (lower is better)
Translates to: IAWPEVDPGLPL*LNASHVAQLSI
Trigger: TATGCTCAGCTGTGCAACGTGGCTCGCATTGAGGCAGAGCGGGAGGCCGGGGTCCACTTCCGGCCAGGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CGCTCGGCCCAGCGTCGAGGTGCCAGCCTGGAGTTCTaGGGGTCAAATTCCTCATCGGGAATGACCTCCTCG +
Preference number: 6 (lower is better)
Translates to: RSAQRRGASLEF*GSNSSSGMTSS
Trigger: CGAGGAGGTCATTCCCGATGAGGAATTTGACCCCCAGAACTCCAGGCTGGCACCTCGACGCTGGGCCGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp GGAGGTTCACGCAGGTTCCAGGGCCACAGACGTTGGTaGCTCCAGCAGCGCATCTGTCAATGCCTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: GGSRRFQGHRRW*LQQRICQCLGC
Trigger: GCACCCCAGGCATTGACAGATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTGGAACCTGCGTGAACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 90 bp CTGTATCCATCGGGGAGGTTCACGCAGGTTCCAGGGCCACAGACGTaGGTGGCTCCAGCAGCGCATCTGTCAATGCCTGGGGTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LYPSGRFTQVPGPQT*VAPAAHLSMPGVLR
Trigger: CCTGAGCACCCCAGGCATTGACAGATGCGCTGCTGGAGCCACCAACGTCTGTGGCCCTGGAACCTGCGTGAACCTCCCCGATGGATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp CTGCAAAGGAGACTCAAGGATGGGTGTGCGGTCCGCTaGGTGACCGGCTGTGTTGGGGAAGGCAGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LQRRLKDGCAVR*VTGCVGEGRLR
Trigger: CCTGAGCCTGCCTTCCCCAACACAGCCGGTCACTCAGCGGACCGCACACCCATCCTTGAGTCTCCTTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp GCTTCAAATGAGGGCTCCAGGGAGGCTGAGACTCGCTaGTTCCACAATGCCCGGCTCCTGCTGGGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: ASNEGSREAETR*FHNARLLLGFG
Trigger: CCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTCAGCCTCCCTGGAGCCCTCATTTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS CAA 72 bp CCAGCGACCGGTAGCACAGTCCCTGCAGCATGGAGATaGCCTTGTCCGACACACAGCGGCTCCGCGATGGAT +
Preference number: 6 (lower is better)
Translates to: PATGSTVPAAWR*PCPTHSGSAMD
Trigger: ATCCATCGCGGAGCCGCTGTGTGTCGGACAAGGCAATCTCCATGCTGCAGGGACTGTGCTACCGGTCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp GCCTGGAGTTCTGGGGGTCAAATTCCTCATCGGGAATaGCCTCCTCGCAGCGGGCTCCACGGAAACCAGAGC +
Preference number: 6 (lower is better)
Translates to: AWSSGGQIPHRE*PPRSGLHGNQS
Trigger: GCTCTGGTTTCCGTGGAGCCCGCTGCGAGGAGGTCATTCCCGATGAGGAATTTGACCCCCAGAACTCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp GGTTCACGGAGGCCAGCTGGTTGGAGAGCGGCAGTGTaGAAGTGGACTGCTTCAGTGGGGCTTCCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: GSRRPAGWRAAV*KWTASVGLPAR
Trigger: CCTTGCTGGAAGCCCCACTGAAGCAGTCCACTTTCACACTGCCGCTCTCCAACCAGCTGGCCTCCGTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp CCTCACAGGCCAGACAAGTGTAGGAGCCAGGGGAATTaGCGCATCTCCCATCAGGGCAGGTACCGGGGTGAC +
Preference number: 6 (lower is better)
Translates to: PHRPDKCRSQGN*RISHQGRYRGD
Trigger: GTCACCCCGGTACCTGCCCTGATGGGAGATGCGTCAATTCCCCTGGCTCCTACACTTGTCTGGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp CTCTGGATGGCTGGCCACGTAGTGGGGCTGGAGTTCTaGGGGCTGCAAAGGAGACTCAAGGATGGGTGTGCG +
Preference number: 6 (lower is better)
Translates to: LWMAGHVVGLEF*GLQRRLKDGCA
Trigger: CGCACACCCATCCTTGAGTCTCCTTTGCAGCCCTCAGAACTCCAGCCCCACTACGTGGCCAGCCATCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261978.9
ENST00000556690.5
CDS TCA 72 bp ACCTGGATGGCTGGCCACGTAGTGGGGCTGGAGTTCTaGGGGCTGCAAAGGAGACTCAAGGATGGGTGTGCG +
Preference number: 6 (lower is better)
Translates to: TWMAGHVVGLEF*GLQRRLKDGCA
Trigger: CGCACACCCATCCTTGAGTCTCCTTTGCAGCCCTCAGAACTCCAGCCCCACTACGTGGCCAGCCATCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS GCA 72 bp GTTCTGAGGGCTGCAAAGGAGACTCAAGGATGGGTGTaGGGTCCGCTGAGTGACCGGCTGTGTTGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VLRAAKETQGWV*GPLSDRLCWGR
Trigger: CCTTCCCCAACACAGCCGGTCACTCAGCGGACCGCACACCCATCCTTGAGTCTCCTTTGCAGCCCTCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS GCA 72 bp AGGCTGAGACTCGCTGCTTCCACAATGCCCGGCTCCTaGTGGGGTTTGGGTGGTCGAGGAGTGTGTTGCTAC +
Preference number: 6 (lower is better)
Translates to: RLRLAASTMPGS*WGLGGRGVCCY
Trigger: GTAGCAACACACTCCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS CCA 72 bp AGGGGATCTGGCAGAAATAGATGCGGAAGCCAGACTTaGGATCGTGCCCATGGCCGCCCTGGCTGTACAGGG +
Preference number: 6 (lower is better)
Translates to: RGSGRNRCGSQT*DRAHGRPGCTG
Trigger: CCCTGTACAGCCAGGGCGGCCATGGGCACGATCCCAAGTCTGGCTTCCGCATCTATTTCTGCCAGATCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp ATTCATCCACATCTTCACAGGAGTCACCCAGGGGGCTaGGCCGGTAGCCCCCATCGCAGTCCTTGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: IHPHLHRSHPGG*AGSPHRSPCRR
Trigger: TCTCCTGCAAGGACTGCGATGGGGGCTACCGGCCCAGCCCCCTGGGTGACTCCTGTGAAGATGTGGATGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
ENST00000556690.5
CDS CAA 90 bp GGCTGGAAGCCAGTCTCACATAGACAGTTGAAGGAGCCCTCGGTGTaGACACAGTGCCCTCCCACACACGGGTCTGTGGTGGCACACTCG +
Preference number: 6 (lower is better)
Translates to: GWKPVSHRQLKEPSV*TQCPPTHGSVVAHS
Trigger: CGAGTGTGCCACCACAGACCCGTGTGTGGGAGGGCACTGTGTCAACACCGAGGGCTCCTTCAACTGTCTATGTGAGACTGGCTTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp CCCTTCGAAGCCGGCTGGGGGCTCCTGCTGGCAATATaGCTAGCAGGTGGAGGAGATGGAAGTGAAACAGCT +
Preference number: 6 (lower is better)
Translates to: PFEAGWGLLLAI*LAGGGDGSETA
Trigger: AGCTGTTTCACTTCCATCTCCTCCACCTGCTAGTCATATTGCCAGCAGGAGCCCCCAGCCGGCTTCGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553939.5
CDS CCA 72 bp CTGAGACTCGCTGCTTCCACAATGCCCGGCTCCTGCTaGGGTTTGGGTGGTCGAGGAGTGTGTTGCTACATA +
Preference number: 6 (lower is better)
Translates to: LRLAASTMPGSC*GLGGRGVCCYI
Trigger: TATGTAGCAACACACTCCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS CAA 72 bp TGGCACGGCGGCTCGCAAACGGGTTTGATACAGTGGTaGGTGCTGTTTGCTGTTGTCCATCCTGGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: WHGGSQTGLIQW*VLFAVVHPGQH
Trigger: GTGCTGCCCAGGATGGACAACAGCAAACAGCACCAACCACTGTATCAAACCCGTTTGCGAGCCGCCGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 72 bp CCCTGCTCACAAGAGCATCTGAAGGAGCCTTCTAGGTaGGTGCACTTTCCATGGGCACAGACCCCGGGAGTC +
Preference number: 6 (lower is better)
Translates to: PCSQEHLKEPSR*VHFPWAQTPGV
Trigger: GACTCCCGGGGTCTGTGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCTTCAGATGCTCTTGTGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 90 bp AGGCTGAGACTCGCTGCTTCCACAATGCCCGGCTCCTGCTGGGGTTaGGGTGGTCGAGGAGTGTGTTGCTACATAGTTTTTGGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: RLRLAASTMPGSCWG*GGRGVCCYIVFGFG
Trigger: CCCAAACCCAAAAACTATGTAGCAACACACTCCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCAGCGAGTCTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS GCA 72 bp CTCGCAAACGGGTTTGATACAGTGGTTGGTGCTGTTTaGTGTTGTCCATCCTGGGCAGCACTGTCCCCCGCA +
Preference number: 6 (lower is better)
Translates to: LANGFDTVVGAV*CCPSWAALSPA
Trigger: TGCGGGGGACAGTGCTGCCCAGGATGGACAACAGCAAACAGCACCAACCACTGTATCAAACCCGTTTGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp TGTCACAGAAGCCGTGGCTGCCACACATGGTGTCGTTaGCGCACTCGTCTATGTCAATGCAGTCTCCGTTCG +
Preference number: 6 (lower is better)
Translates to: CHRSRGCHTWCR*RTRLCQCSLRS
Trigger: CGAACGGAGACTGCATTGACATAGACGAGTGCGCCAACGACACCATGTGTGGCAGCCACGGCTTCTGTGACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
CDS CCA 72 bp TGTCACAGAAGCCGTGGCTGCCACACATGGTGTCGTTaGCGCACTCGTCTATGTCCACACACTCTCCACTCT +
Preference number: 6 (lower is better)
Translates to: CHRSRGCHTWCR*RTRLCPHTLHS
Trigger: AGAGTGGAGAGTGTGTGGACATAGACGAGTGCGCCAACGACACCATGTGTGGCAGCCACGGCTTCTGTGACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556690.5
CDS CAA 72 bp TTGTCACAGAAGCCGTGGCTGCCACACATGGTGTCGTaGGCGCACTCGTCTATGTCCACACACTCTCCACTC +
Preference number: 6 (lower is better)
Translates to: LSQKPWLPHMVS*AHSSMSTHSPL
Trigger: GAGTGGAGAGTGTGTGGACATAGACGAGTGCGCCAACGACACCATGTGTGGCAGCCACGGCTTCTGTGACAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556690.5
CDS CCA 72 bp CAATGCCTGGGGTGCTCAGGGTCACCAGCACATCAGTaGAGGGGGTCACTTGTTCTTCCTGTATCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: QCLGCSGSPAHQ*RGSLVLPVSLQ
Trigger: TTGCAGAGATACAGGAAGAACAAGTGACCCCCTCCACTGATGTGCTGGTGACCCTGAGCACCCCAGGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp TCTATGTCCACACACTCTCCACTCTCTGGGGAGGGCTaGAAGCCAGTCTCACATAGACAGTTGAAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SMSTHSPLSGEG*KPVSHRQLKEP
Trigger: GGGCTCCTTCAACTGTCTATGTGAGACTGGCTTCCAGCCCTCCCCAGAGAGTGGAGAGTGTGTGGACATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556690.5
CDS CAA 72 bp CAGCTGTTGGCACAGTGTCCACGGGCACAGGTCTGCTaGCAGATGGTGGGAGTGAAGACGATCTTGATCTTC +
Preference number: 6 (lower is better)
Translates to: QLLAQCPRAQVC*QMVGVKTILIF
Trigger: GAAGATCAAGATCGTCTTCACTCCCACCATCTGCAAGCAGACCTGTGCCCGTGGACACTGTGCCAACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 72 bp GCTCAGGGTCACCAGCACATCAGTGGAGGGGGTCACTaGTTCTTCCTGTATCTCTGCAATCCCCTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: AQGHQHISGGGH*FFLYLCNPLFR
Trigger: CCTGAACAGGGGATTGCAGAGATACAGGAAGAACAAGTGACCCCCTCCACTGATGTGCTGGTGACCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CAA 72 bp TTGTCACAGAAGCCGTGGCTGCCACACATGGTGTCGTaGGCGCACTCGTCTATGTCAATGCAGTCTCCGTTC +
Preference number: 6 (lower is better)
Translates to: LSQKPWLPHMVS*AHSSMSMQSPF
Trigger: GAACGGAGACTGCATTGACATAGACGAGTGCGCCAACGACACCATGTGTGGCAGCCACGGCTTCTGTGACAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556206.1
CDS TCA 72 bp ACACTCATTGATATCTTGACACTCCTGTGTCGCCCCTaGGGTGGCCAGAGTGTAGCCAGGGTAGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: TLIDILTLLCRP*GGQSVARVAEA
Trigger: TGCTTCTGCTACCCTGGCTACACTCTGGCCACCTCAGGGGCGACACAGGAGTGTCAAGATATCAATGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS TCA 72 bp GAATTGACGCATCTCCCATCAGGGCAGGTACCGGGGTaGCGGCATTCGTTGATATCTTGGCAGTGTCCTTTC +
Preference number: 6 (lower is better)
Translates to: ELTHLPSGQVPG*RHSLISWQCPF
Trigger: GAAAGGACACTGCCAAGATATCAACGAATGCCGTCACCCCGGTACCTGCCCTGATGGGAGATGCGTCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp CATCTGAAGGAGCCTTCTAGGTTGGTGCACTTTCCATaGGCACAGACCCCGGGAGTCAGACACTCATTCACA +
Preference number: 6 (lower is better)
Translates to: HLKEPSRLVHFP*AQTPGVRHSFT
Trigger: TGTGAATGAGTGTCTGACTCCCGGGGTCTGTGCCCATGGAAAGTGCACCAACCTAGAAGGCTCCTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5
CDS CCA 72 bp TGCTTCCACAATGCCCGGCTCCTGCTGGGGTTTGGGTaGTCGAGGAGTGTGTTGCTACATAGTTTTTGGGTT +
Preference number: 6 (lower is better)
Translates to: CFHNARLLLGFG*SRSVLLHSFWV
Trigger: AACCCAAAAACTATGTAGCAACACACTCCTCGACCACCCAAACCCCAGCAGGAGCCGGGCATTGTGGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554861.1
CDS CAA 72 bp CAGGTCTGCTTGCAGATGGTGGGAGTGAAGACGATCTaGATCTTCTTGATTTTCTCCGTGAGGTTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: QVCLQMVGVKTI*IFLIFSVRFSP
Trigger: GGGGCTGAACCTCACGGAGAAAATCAAGAAGATCAAGATCGTCTTCACTCCCACCATCTGCAAGCAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261978.9
ENST00000553939.5
ENST00000556690.5