Pregenerated sensors for LSM6 (Homo sapiens)
Ensembl gene IDs: ENSG00000164167Ensembl transcript IDs: ENST00000296581.11, ENST00000502781.5, ENST00000503982.1, ENST00000504181.1, ENST00000507449.1, ENST00000510331.1, ENST00000515311.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATTTTCAGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCATGCAGGGGGACCACTaGCAGGAGGGCTTTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: IFSVHTVKPCEMLLFTFPMQGDH*QEGFLL Trigger: GAGGAGAAAGCCCTCCTGTCAGTGGTCCCCCTGCAT...GGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACTGAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR GCA 90 bp | GTGAGAGATGTACAGGAATGGCCCCTCCCCTACTGTGTTCATAAACTGAGAGAAAATTGCATAAGGAGATaGAGGGGGACCACTGACAGG | + |
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Preference number: 2 (lower is better) Translates to: VRDVQEWPLPYCVHKLRENCIRR*RGTTDR Trigger: CCTGTCAGTGGTCCCCCTGCATCTCCTTATGCAATT...TTCTCTCAGTTTATGAACACAGTAGGGGAGGGGCCATTCCTGTACATCTCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR TCA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATGACTCAATCAGTGGCTaGACTTCTGATCCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDDSISG*TSDPVA Trigger: GGCCACAGGATCAGAAGTTCAGCCACTGATTGAGTC...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR GCA 90 bp | GTGAGAGATGTACAGGAATGGCCCCTCCCCTACTGTGTTCATAAACTGAGAGAACCTAAAAAGTCTAATTaGATAAGGAGATGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: VRDVQEWPLPYCVHKLREPKKSN*IRRCRG Trigger: CCCCCTGCATCTCCTTATGCAATTAGACTTTTTAGG...TTCTCTCAGTTTATGAACACAGTAGGGGAGGGGCCATTCCTGTACATCTCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCAAGTTAAAGCAACATAAAGCCTaGTGCTCTGCTCCTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: SVHTVKPCEMLLFTFPKLKQHKA*CSAPGQ Trigger: TTGTCCAGGAGCAGAGCACCAGGCTTTATGTTGCTT...TAACTTGGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCAGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCAATACAGCTGATTTTTaGGAAAGGCCTCCCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: IFSVHTVKPCEMLLFTFPNTADF*ERPPYS Trigger: GCTGTAGGGAGGCCTTTCTCAAAAATCAGCTGTATT...GGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACTGAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR CCA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATAGAGATGTACAGGAATaGCCCCTCCCCTACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDRDVQE*PLPYCV Trigger: AACACAGTAGGGGAGGGGCCATTCCTGTACATCTCT...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR GCA 90 bp | GTGAGAGATGTACAGGAATGGCCCCTCCCCTACTGTGTTCATAAACTGAGAGAAATGAACAGAAAAGGATaGAATAAAGGAGGATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VRDVQEWPLPYCVHKLREMNRKG*NKGGFL Trigger: GAGGAATCCTCCTTTATTGCATCCTTTTCTGTTCAT...TTCTCTCAGTTTATGAACACAGTAGGGGAGGGGCCATTCCTGTACATCTCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR GCA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATTTCCCACTCCTTATGTaGAAGTGGCACTCTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDFPLLM*KWHSWL Trigger: AAGCCAAGAGTGCCACTTGCACATAAGGAGTGGGAA...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTAAATATATCCAACTATaGAAAGCGTTGCTCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TSDPVAPFCSFRLKLDAFKYIQL*KALLSW Trigger: CCAAGAGAGCAACGCTTTTCATAGTTGGATATATTT...AAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCAAGTTAACTGTGTTCATAAACTaGGAGAATAACGTTGATGCC | + |
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Preference number: 2 (lower is better) Translates to: SVHTVKPCEMLLFTFPKLTVFIN*ENNVDA Trigger: GGCATCAACGTTATTCTCTCAGTTTATGAACACAGT...TAACTTGGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR CAA 90 bp | ATTGGGAAGGGAGGGAAGAGGAAGTCCAATACAACATTCACACAATaGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: IGKGGKRKSNTTFTQ*SGIHSTTVPRYICC Trigger: ACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGGACTTCCTCTTCCCTCCCTTCCCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAGTCCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGCTCCTTATGTGCAAGTaGCACTCTTGGCTTTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: RGSPIQHSHNCLVFIQPQLLMCK*HSWLSN Trigger: ATTGGAAAGCCAAGAGTGCCACTTGCACATAAGGAG...CTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGGACTTCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR TCA 90 bp | CACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGTTCAAAGGCAAATACAGCTaGTTTTTGAGAAAGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HTIVWYSFNHSAQIYLLFKGKYS*FLRKAS Trigger: GGAGGCCTTTCTCAAAAATCAGCTGTATTTGCCTTT...GAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR GCA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCACAAACTCTAGGCTTTaGTTTAATCTGACTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LINCENPLSRSHITRGAATNSRL*FNLTVR Trigger: TCTCACAGTCAGATTAAAGCAAAGCCTAGAGTTTGT...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTGTAGAACATATTCACGCAAAATATATCCAACTATaGAAAGCGTTGCTCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PFCSFRLKLDAFVEHIHAKYIQL*KALLSW Trigger: CCAAGAGAGCAACGCTTTTCATAGTTGGATATATTT...TGCGTGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| 3UTR-3UTR GCA 90 bp | CAGCGTAAAACTGTTTGGAGAATAAAGCAGGGTTGTGGAAAGCTCATTAATAAACAGACTGAAACTGGATaGCTTTGTAGAACATATTCA | + |
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Preference number: 2 (lower is better) Translates to: QRKTVWRIKQGCGKLINKQTETG*LCRTYS Trigger: TGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTG...TTTATTAATGAGCTTTCCACAACCCTGCTTTATTCTCCAAACAGTTTTACGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR GCA 72 bp | AAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTaGCTTGTGCCAAGCAACATAAAGCCTGGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: KSSQQESHNQRS*LVPSNIKPGAL Trigger: CAGAGCACCAGGCTTTATGTTGCTTGGCACAAGGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR CCA 72 bp | CCAGAGGAGCTGCCTTGTGCCAAGCAACATAAAGCCTaGTGCTCTGCTCCTGGACAATGTCAAAGGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: PEELPCAKQHKA*CSAPGQCQRQI Trigger: TATTTGCCTTTGACATTGTCCAGGAGCAGAGCACCAGGCTTTATGTTGCTTGGCACAAGGCAGCTCCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR GCA 72 bp | GCAGGGAAACCTAAAAAGTCTAATTGCATAAGGAGATaGAGGGGGACCACTGACAGGAGGGCTTTCTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: AGKPKKSNCIRR*RGTTDRRAFSS Trigger: TGAGGAGAAAGCCCTCCTGTCAGTGGTCCCCCTGCATCTCCTTATGCAATTAGACTTTTTAGGTTTCCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR CCA 72 bp | CTTTGCTTTAATCTGACTGTGAGAGATGTACAGGAATaGCCCCTCCCCTACTGTGTTCATAAACTGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LCFNLTVRDVQE*PLPYCVHKLRE Trigger: TTCTCTCAGTTTATGAACACAGTAGGGGAGGGGCCATTCCTGTACATCTCTCACAGTCAGATTAAAGCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR-3UTR CAA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCGTGCAAGTGGCACTCTaGGCTTTCCAATTCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LINCENPLSRSHITRGAAVQVAL*AFQFCF Trigger: AAAACAGAATTGGAAAGCCAAGAGTGCCACTTGCAC...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR TCA 72 bp | ATGGAATTGCTTTTAGAGGTGGCTGATATAAGTGAATaGAGGGACACAATAACCTGCAGCCCCACATATTCT | + |
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Preference number: 3 (lower is better) Translates to: MELLLEVADISE*RDTITCSPTYS Trigger: AGAATATGTGGGGCTGCAGGTTATTGTGTCCCTTCATTCACTTATATCAGCCACCTCTAAAAGCAATTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | TCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCTTGTGCCAAGCAACATAAAGATGCAGGGGGACCACTaGCAGGAGGGCTTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQQESHNQRSCLVPSNIKMQGDH*QEGFLL Trigger: GAGGAGAAAGCCCTCCTGTCAGTGGTCCCCCTGCAT...CTTTATGTTGCTTGGCACAAGGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATCCCGGCCGCCGCGGATaGTCCCAGCCAAAACCGAAA | + |
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Preference number: 4 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDPGRRG*SQPKPK Trigger: TTTCGGTTTTGGCTGGGATCATCCGCGGCGGCCGGG...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | TCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCTTGTGCCAAGCAACATAAAGAATTGCATAAGGAGATaGAGGGGGACCACTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SQQESHNQRSCLVPSNIKNCIRR*RGTTDR Trigger: CCTGTCAGTGGTCCCCCTGCATCTCCTTATGCAATT...CTTTATGTTGCTTGGCACAAGGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | ACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACCTGGTGCTCTGCTCCTaGACAATGTCAAAGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: TQSVAELLILWPLFVASDLVLCS*TMSKAN Trigger: ATTTGCCTTTGACATTGTCCAGGAGCAGAGCACCAG...GTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCGACTCAATCAGTGGCTaGACTTCTGATCCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LINCENPLSRSHITRGAADSISG*TSDPVA Trigger: GGCCACAGGATCAGAAGTTCAGCCACTGATTGAGTC...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | ACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACCTCCTTATGTGCAAGTaGCACTCTTGGCTTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: TQSVAELLILWPLFVASDLLMCK*HSWLSN Trigger: ATTGGAAAGCCAAGAGTGCCACTTGCACATAAGGAG...GTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | ATTTTCAGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCAGAGATGTACAGGAATaGCCCCTCCCCTACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IFSVHTVKPCEMLLFTFPRDVQE*PLPYCV Trigger: AACACAGTAGGGGAGGGGCCATTCCTGTACATCTCT...GGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACTGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | CCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTGTAGAACATATTCACGCAGACTCAATCAGTGGCTaGACTTCTGATCCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PFCSFRLKLDAFVEHIHADSISG*TSDPVA Trigger: GGCCACAGGATCAGAAGTTCAGCCACTGATTGAGTC...TGCGTGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| CDS-3UTR GCA 90 bp | CTTTGCTTTAATCTGACTGTGAGAGATGTACAGGAATGGCCCCTCCCCTACTGTCCTAAAAAGTCTAATTaGATAAGGAGATGCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LCFNLTVRDVQEWPLPYCPKKSN*IRRCRG Trigger: CCCCCTGCATCTCCTTATGCAATTAGACTTTTTAGG...ACAGTAGGGGAGGGGCCATTCCTGTACATCTCTCACAGTCAGATTAAAGCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | ACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTGAACTTCTGATCCTGTaGCCCCTTTTTGTAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TSDPVAPFCSFRLKLDAFELLIL*PLFVAS Trigger: TGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTC...AAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| CDS-3UTR TCA 90 bp | ACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACACTGTGTTCATAAACTaGGAGAATAACGTTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: TQSVAELLILWPLFVASDTVFIN*ENNVDA Trigger: GGCATCAACGTTATTCTCTCAGTTTATGAACACAGT...GTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCCATAACCAGAGGAGCTaGCTTGTGCCAAGCAACATA | + |
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Preference number: 4 (lower is better) Translates to: LINCENPLSRSHITRGAAHNQRS*LVPSNI Trigger: TATGTTGCTTGGCACAAGGCAGCTCCTCTGGTTATG...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | CACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGTTCTCTCCTTCTCGATCCTaGCCCCCATCCTTCAACCAA | + |
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Preference number: 4 (lower is better) Translates to: HTIVWYSFNHSAQIYLLFSPSRS*PPSFNQ Trigger: TTGGTTGAAGGATGGGGGGCAGGATCGAGAAGGAGA...GAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | AGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCAAGTTAGAACTTCTGATCCTGTaGCCCCTTTTTGTAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SVHTVKPCEMLLFTFPKLELLIL*PLFVAS Trigger: TGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTC...TAACTTGGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCAAGCAACATAAAGCCTaGTGCTCTGCTCCTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: LINCENPLSRSHITRGAAKQHKA*CSAPGQ Trigger: TTGTCCAGGAGCAGAGCACCAGGCTTTATGTTGCTT...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | ACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTTTTGTACTTACATACTaGACCTTTTCCAAGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: TSDPVAPFCSFRLKLDAFFVLTY*TFSKPL Trigger: CAGGGGCTTGGAAAAGGTCCAGTATGTAAGTACAAA...AAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCAATACAGCTGATTTTTaGGAAAGGCCTCCCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: LINCENPLSRSHITRGAANTADF*ERPPYS Trigger: GCTGTAGGGAGGCCTTTCTCAAAAATCAGCTGTATT...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | GTGACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGTTTCCTCGGATAAATaGATCCCCATACTTATTCTT | + |
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Preference number: 4 (lower is better) Translates to: VTQSVAELLILWPLFVASVSSDK*IPILIL Trigger: AAGAATAAGTATGGGGATGCATTTATCCGAGGAAAC...TGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| CDS-3UTR GCA 90 bp | ACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACCAGACTGAAACTGGATaGCTTTGTAGAACATATTCA | + |
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Preference number: 4 (lower is better) Translates to: TQSVAELLILWPLFVASDQTETG*LCRTYS Trigger: TGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTG...GTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| CDS-3UTR GCA 90 bp | GTGACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCACAGACTGAAACTGGATaGCTTTGTAGAACATATTCA | + |
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Preference number: 4 (lower is better) Translates to: VTQSVAELLILWPLFVASQTETG*LCRTYS Trigger: TGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTG...TGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| CDS-3UTR GCA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATCAACATAAAGCCTGGTaGTCTGCTCCTGGACAATGT | + |
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Preference number: 4 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDQHKAW*SAPGQC Trigger: ACATTGTCCAGGAGCAGAGCACCAGGCTTTATGTTG...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| 3UTR CAA 72 bp | GGAGGGAAGAGGAAGTCCAATACAACATTCACACAATaGTCTGGTATTCATTCAACCACAGTGCCCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: GGKRKSNTTFTQ*SGIHSTTVPRY Trigger: ATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGGACTTCCTCTTCCCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | GCCCCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTGTAGAACATATTCACAAAGGCAAATACAGCTaGTTTTTGAGAAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: APFCSFRLKLDAFVEHIHKGKYS*FLRKAS Trigger: GGAGGCCTTTCTCAAAAATCAGCTGTATTTGCCTTT...GTGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | CACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGTTCTTCCCACTCCTTATGTaGAAGTGGCACTCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HTIVWYSFNHSAQIYLLFFPLLM*KWHSWL Trigger: AAGCCAAGAGTGCCACTTGCACATAAGGAGTGGGAA...GAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | CCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTGTAGAACATATTCACGCAAGGGACACAATAACCTaGAGCCCCACATATTCTACA | + |
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Preference number: 4 (lower is better) Translates to: PFCSFRLKLDAFVEHIHARDTIT*SPTYST Trigger: TGTAGAATATGTGGGGCTGCAGGTTATTGTGTCCCT...TGCGTGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | CACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGTTCCACGGTAAAACCCTGTaGAATGCTTCTGTTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: HTIVWYSFNHSAQIYLLFHGKTL*NASVHL Trigger: AAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTG...GAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | AGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCAAGTTAACAAACTCTAGGCTTTaGTTTAATCTGACTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SVHTVKPCEMLLFTFPKLTNSRL*FNLTVR Trigger: TCTCACAGTCAGATTAAAGCAAAGCCTAGAGTTTGT...TAACTTGGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | CACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGTTCGCTGATATAAGTGAATaGAGGGACACAATAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: HTIVWYSFNHSAQIYLLFADISE*RDTITC Trigger: GCAGGTTATTGTGTCCCTTCATTCACTTATATCAGC...GAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATCAGCGTAAAACTGTTTaGAGAATAAAGCAGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDQRKTV*RIKQGC Trigger: ACAACCCTGCTTTATTCTCCAAACAGTTTTACGCTG...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CCA 90 bp | AGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCAAGTTATTAAAAGTAGTTCCATaGTTGAAAACAGTACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SVHTVKPCEMLLFTFPKLLKVVP*LKTVLH Trigger: GTGGAGTACTGTTTTCAACCATGGAACTACTTTTAA...TAACTTGGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATAAATATATCCAACTATaGAAAGCGTTGCTCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDKYIQL*KALLSW Trigger: CCAAGAGAGCAACGCTTTTCATAGTTGGATATATTT...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR GCA 90 bp | CACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGTTCATGAACAGAAAAGGATaGAATAAAGGAGGATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: HTIVWYSFNHSAQIYLLFMNRKG*NKGGFL Trigger: GAGGAATCCTCCTTTATTGCATCCTTTTCTGTTCAT...GAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR TCA 90 bp | AAACTGGATGCCTTTGTAGAACATATTCACGCAAGGATTATGTCAGTGAAAAATAAATATATCCAACTATaGAAAGCGTTGCTCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KLDAFVEHIHARIMSVKNKYIQL*KALLSW Trigger: CCAAGAGAGCAACGCTTTTCATAGTTGGATATATTT...ATTTTTCACTGACATAATCCTTGCGTGAATATGTTCTACAAAGGCATCCAGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504181.1 |
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| CDS CCA 90 bp | GGCCTAGGGCCGCTGCAGCCGCCGCTCCACAGCGCGACTGAACACTaGGGCACCGAACCTGGGGCTGCGCCCGGCCCCGTCGTCGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: GLGPLQPPLHSATEH*GTEPGAAPGPVVGP Trigger: CGGGCCGACGACGGGGCCGGGCGCAGCCCCAGGTTCGGTGCCCCAGTGTTCAGTCGCGCTGTGGAGCGGCGGCTGCAGCGGCCCTAGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS GCA 90 bp | AGGGCGGTCCCGGCGCCCACCATCAGACCTCTCCCAGCCATTCCATaGGCGGAGAGCTTGGACGCGGCATTTCGCGGGGACCCGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: RAVPAPTIRPLPAIP*AESLDAAFRGDPPP Trigger: GGGTGGCGGGTCCCCGCGAAATGCCGCGTCCAAGCTCTCCGCGCATGGAATGGCTGGGAGAGGTCTGATGGTGGGCGCCGGGACCGCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS CCA 90 bp | CGCCCACCATCAGACCTCTCCCAGCCATTCCATGCGCGGAGAGCTTaGACGCGGCATTTCGCGGGGACCCGCCACCCAGCGGTCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RPPSDLSQPFHARRA*TRHFAGTRHPAVPS Trigger: GGAAGGGACCGCTGGGTGGCGGGTCCCCGCGAAATGCCGCGTCCAAGCTCTCCGCGCATGGAATGGCTGGGAGAGGTCTGATGGTGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS TCA 90 bp | AATCTTGGGATTAGCGTCGGGGCTCCCTGGGGAACTTCAACAACCTaGATTGATCTCGGACGCCAACTCGGTAGGAGCCGGGACGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: NLGISVGAPWGTSTT*IDLGRQLGRSRDGA Trigger: GGCACCGTCCCGGCTCCTACCGAGTTGGCGTCCGAGATCAATTCAGGTTGTTGAAGTTCCCCAGGGAGCCCCGACGCTAATCCCAAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS-3UTR CAA 90 bp | TCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCTTGTGCCAAGCAACATAAAGCCTTCAACCAAGCAGTaGTTTCGAATCACACCATCG | + |
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Preference number: 5 (lower is better) Translates to: SQQESHNQRSCLVPSNIKPSTKQ*FRITPS Trigger: CGATGGTGTGATTCGAAACAACTGCTTGGTTGAAGG...CTTTATGTTGCTTGGCACAAGGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CAA 90 bp | GTGAGAGATGTACAGGAATGGCCCCTCCCCTACTGTGTTCATAAACTGAGAGAAAGTGCCCAGATATATTaGTTGTTCCTAGAGACAGCG | + |
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Preference number: 5 (lower is better) Translates to: VRDVQEWPLPYCVHKLRESAQIY*LFLETA Trigger: CGCTGTCTCTAGGAACAACAAATATATCTGGGCACT...TTCTCTCAGTTTATGAACACAGTAGGGGAGGGGCCATTCCTGTACATCTCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CAA 90 bp | ACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACACATGTATGCTCCACTaGGAGAGCCATCCATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TQSVAELLILWPLFVASDTCMLH*ESHPFS Trigger: AGAAAATGGATGGCTCTCCAAGTGGAGCATACATGT...GTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CAA 90 bp | ACTCAATCAGTGGCTGAACTTCTGATCCTGTGGCCCCTTTTTGTAGCTTCAGACACTGAGAGAATAACGTaGATGCCAATGCTCCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: TQSVAELLILWPLFVASDTERIT*MPMLLK Trigger: TTTCAGGAGCATTGGCATCAACGTTATTCTCTCAGT...GTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CAA 90 bp | TCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCTTGTGCCAAGCAACATAAAGAAAGTAGTTCCATGGTaGAAAACAGTACTCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: SQQESHNQRSCLVPSNIKKVVPW*KTVLHC Trigger: ACAGTGGAGTACTGTTTTCAACCATGGAACTACTTT...CTTTATGTTGCTTGGCACAAGGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CAA 90 bp | ATTTTCAGTGTGCACACGGTAAAACCCTGTGAAATGCTTCTGTTCACCTTTCCCGTGCAAGTGGCACTCTaGGCTTTCCAATTCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: IFSVHTVKPCEMLLFTFPVQVAL*AFQFCF Trigger: AAAACAGAATTGGAAAGCCAAGAGTGCCACTTGCAC...GGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACTGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS GCA 90 bp | CAGGAGACAGAAGTCACACAAATCACACTGAAAGGCAGAAGCACATaGTATACTGTCAGAGTTGTCCTTCTAAAAGGAATGATCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QETEVTQITLKGRST*YTVRVVLLKGMISE Trigger: CTCTGAGATCATTCCTTTTAGAAGGACAACTCTGACAGTATAGCATGTGCTTCTGCCTTTCAGTGTGATTTGTGTGACTTCTGTCTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503982.1 |
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| CDS-3UTR CAA 90 bp | CCAATACAACATTCACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATCTGATGTACAACACATaGTTTCCTCGGATAAATGCA | + |
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Preference number: 5 (lower is better) Translates to: PIQHSHNCLVFIQPQCPDLMYNT*FPRINA Trigger: TGCATTTATCCGAGGAAACAATGTGTTGTACATCAG...ATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CAA 90 bp | CCTTTTTGTAGCTTCAGACTGAAACTGGATGCCTTTGTAGAACATATTCACGCACTGATGTACAACACATaGTTTCCTCGGATAAATGCA | + |
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Preference number: 5 (lower is better) Translates to: PFCSFRLKLDAFVEHIHALMYNT*FPRINA Trigger: TGCATTTATCCGAGGAAACAATGTGTTGTACATCAG...TGCGTGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296581.11 ENST00000504181.1 |
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| CDS-3UTR CAA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCCTCCTCACTGAAATCTaGTTCATCTTTAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LINCENPLSRSHITRGAALLTEI*FIFRIS Trigger: AGAAATCCTAAAGATGAACAAGATTTCAGTGAGGAG...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS-3UTR CAA 90 bp | TTAATAAATTGTGAAAATCCTCTCAGCAGGAGTCACATAACCAGAGGAGCTGCCACAACATTCACACAATaGTCTGGTATTCATTCAACC | + |
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Preference number: 5 (lower is better) Translates to: LINCENPLSRSHITRGAATTFTQ*SGIHST Trigger: GGTTGAATGAATACCAGACAATTGTGTGAATGTTGT...GGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS GCA 90 bp | ACCTCTTTGGTGATCTGGATTATAAATAGAAAGGCTTATTTTGAATaGTGTACTGTAGGGCGAAGAAATGTTACCATTGTTTCCTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: TSLVIWIINRKAYFE*CTVGRRNVTIVSSD Trigger: ATCCGAGGAAACAATGGTAACATTTCTTCGCCCTACAGTACAGCATTCAAAATAAGCCTTTCTATTTATAATCCAGATCACCAAAGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507449.1 |
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| CDS-3UTR CAA 90 bp | CACACAATTGTCTGGTATTCATTCAACCACAGTGCCCAGATATATTTGTTGTTCCAGCACTTCCCAAAGTaGATCTTGATTAAAAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: HTIVWYSFNHSAQIYLLFQHFPK*ILIKSS Trigger: ACTACTTTTAATCAAGATCAACTTTGGGAAGTGCTG...GAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296581.11 |
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| CDS TCA 72 bp | CCTAGGGCCGCTGCAGCCGCCGCTCCACAGCGCGACTaGACACTGGGGCACCGAACCTGGGGCTGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PRAAAAAAPQRD*TLGHRTWGCAR Trigger: CCGGGCGCAGCCCCAGGTTCGGTGCCCCAGTGTTCAGTCGCGCTGTGGAGCGGCGGCTGCAGCGGCCCTAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS TCA 72 bp | TCACTCCAGGCGCCCCACGAGCCCGGCCGCCGCGGATaGTCCCAGCCAAAACCGAAAGCGCCGAGGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SLQAPHEPGRRG*SQPKPKAPRQG Trigger: CCCCTGCCTCGGCGCTTTCGGTTTTGGCTGGGATCATCCGCGGCGGCCGGGCTCGTGGGGCGCCTGGAGTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515311.5 |
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| CDS CAA 90 bp | GCGCCCACCATCAGACCTCTCCCAGCCATTCCATGCGCGGAGAGCTaGGACGCGGCATTTCGCGGGGACCCGCCACCCAGCGGTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: APTIRPLPAIPCAES*DAAFRGDPPPSGPF Trigger: GAAGGGACCGCTGGGTGGCGGGTCCCCGCGAAATGCCGCGTCCAAGCTCTCCGCGCATGGAATGGCTGGGAGAGGTCTGATGGTGGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS GCA 72 bp | CCGGCGCCCACCATCAGACCTCTCCCAGCCATTCCATaGGCGGAGAGCTTGGACGCGGCATTTCGCGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PAPTIRPLPAIP*AESLDAAFRGD Trigger: GTCCCCGCGAAATGCCGCGTCCAAGCTCTCCGCGCATGGAATGGCTGGGAGAGGTCTGATGGTGGGCGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS CCA 72 bp | TCAGACCTCTCCCAGCCATTCCATGCGCGGAGAGCTTaGACGCGGCATTTCGCGGGGACCCGCCACCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SDLSQPFHARRA*TRHFAGTRHPA Trigger: CGCTGGGTGGCGGGTCCCCGCGAAATGCCGCGTCCAAGCTCTCCGCGCATGGAATGGCTGGGAGAGGTCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS TCA 72 bp | ATTAGCGTCGGGGCTCCCTGGGGAACTTCAACAACCTaGATTGATCTCGGACGCCAACTCGGTAGGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: ISVGAPWGTSTT*IDLGRQLGRSR Trigger: CCGGCTCCTACCGAGTTGGCGTCCGAGATCAATTCAGGTTGTTGAAGTTCCCCAGGGAGCCCCGACGCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502781.5 |
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| CDS CCA 72 bp | TGCAGGTGTGCGGACACGCATACGCACAGAAAACCTTaGGCGATAGGACTTAAGACCATACAATCGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CRCADTHTHRKP*AIGLKTIQSGS Trigger: GGAACCCGATTGTATGGTCTTAAGTCCTATCGCCCAAGGTTTTCTGTGCGTATGCGTGTCCGCACACCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502781.5 ENST00000510331.1 |
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| CDS GCA 72 bp | ATCCTACACACCTTAAAAATGCCTGCTATGCAGGTGTaGGGACACGCATACGCACAGAAAACCTTGGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: ILHTLKMPAMQV*GHAYAQKTLGD Trigger: ATCGCCCAAGGTTTTCTGTGCGTATGCGTGTCCGCACACCTGCATAGCAGGCATTTTTAAGGTGTGTAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510331.1 |
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| CDS CAA 72 bp | TTAAGACCATACAATCGGGTTCCTCGACCTGACAACTaGGTAAGACAGGCGAGTCCAGCCTTTAATTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LRPYNRVPRPDN*VRQASPAFNSC Trigger: ACAGGAATTAAAGGCTGGACTCGCCTGTCTTACCAAGTTGTCAGGTCGAGGAACCCGATTGTATGGTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502781.5 ENST00000510331.1 |
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| CDS GCA 72 bp | GAAGTCACACAAATCACACTGAAAGGCAGAAGCACATaGTATACTGTCAGAGTTGTCCTTCTAAAAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: EVTQITLKGRST*YTVRVVLLKGM Trigger: CATTCCTTTTAGAAGGACAACTCTGACAGTATAGCATGTGCTTCTGCCTTTCAGTGTGATTTGTGTGACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503982.1 |
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| CDS CAA 90 bp | ATACTCCTGCAAAAACAAATGCTGCTGCACCAAGATGTTCTTCAGTaGTGTTGTTCATACCTGAGTTCACTAGGAATACCTAGCTATTAC | + |
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Preference number: 6 (lower is better) Translates to: ILLQKQMLLHQDVLQ*CCSYLSSLGIPSYY Trigger: GTAATAGCTAGGTATTCCTAGTGAACTCAGGTATGAACAACACAACTGAAGAACATCTTGGTGCAGCAGCATTTGTTTTTGCAGGAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503982.1 |
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| CDS TCA 72 bp | AGTCTCACCCTGTTGCCACACACATTATACGTTATATaGGTGGGACATTCAGGTTGTAAAATGATACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SLTLLPHTLYVI*VGHSGCKMILN Trigger: GTTGAGTATCATTTTACAACCTGAATGTCCCACTCATATAACGTATAATGTGTGTGGCAACAGGGTGAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503982.1 |
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| CDS GCA 72 bp | GTGGGACATTCAGGTTGTAAAATGATACTCAACAGCTaGTTGCCAATCTTGAATACTCCTGCAAAAACAAAT | + |
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Preference number: 6 (lower is better) Translates to: VGHSGCKMILNS*LPILNTPAKTN Trigger: ATTTGTTTTTGCAGGAGTATTCAAGATTGGCAAGCAGCTGTTGAGTATCATTTTACAACCTGAATGTCCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503982.1 |
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