Pregenerated sensors for LSM3 (Homo sapiens)
Ensembl gene IDs: ENSG00000170860Ensembl transcript IDs: ENST00000306024.4
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCCAAGGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTaGACAGCACCACTGCAGAGGAAACCTCAGTGTGGACCATGGCAG | + |
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Preference number: 1 (lower is better) Translates to: VQGVAPRGPHTITPQ*TAPLQRKPQCGPWQ Trigger: CTGCCATGGTCCACACTGAGGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCCTTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CCA 90 bp | CAGAAACCACCAGTCACCAGCTCCACTGACCACCTGCCATCCAGCTaGCTGGAGCCGAGTGCTCTGCAGACTCAGAAGTCCAAGGCGTGG | + |
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Preference number: 1 (lower is better) Translates to: QKPPVTSSTDHLPSS*LEPSALQTQKSKAW Trigger: CCACGCCTTGGACTTCTGAGTCTGCAGAGCACTCGGCTCCAGCCAGCTGGATGGCAGGTGGTCAGTGGAGCTGGTGACTGGTGGTTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR GCA 90 bp | ACACCTCATTGCAGAAACCACCAGTCACCAGCTCCACTGACCACCTaGCATCCAGCTGGCTGGAGCCGAGTGCTCTGCAGACTCAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: TPHCRNHQSPAPLTT*HPAGWSRVLCRLRS Trigger: ACTTCTGAGTCTGCAGAGCACTCGGCTCCAGCCAGCTGGATGGCAGGTGGTCAGTGGAGCTGGTGACTGGTGGTTTCTGCAATGAGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR GCA 90 bp | AGCACCACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTaGTTGAGCTGTCTCTGTTGTGGATTGAGTCCCAGCTCCAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: STTAEETSVWTMAGP*LSCLCCGLSPSSKR Trigger: CCTTTTGGAGCTGGGACTCAATCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGTGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CCA 90 bp | CTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCTGTTGTaGATTGAGTCCCAGCTCCAAAAGGACTCACACATTGCCTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: LSVDHGRALLELSLL*IESQLQKDSHIASP Trigger: AGGGGAGGCAATGTGTGAGTCCTTTTGGAGCTGGGACTCAATCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CCA 90 bp | CATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCTCAGTGTaGACCATGGCAGGGCCCTGCTTGAGCTGTCTCTGTTGTGGATTG | + |
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Preference number: 1 (lower is better) Translates to: HNPSVDSTTAEETSV*TMAGPCLSCLCCGL Trigger: CAATCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR GCA 90 bp | TTTGCTCTGTCTTCTACTGCAGGGTTGATGTTTACAATGTCCCTCTaGCCCTTTCTCCCATATTTGGGTGCTCTTCCCCATGCTCCTATG | + |
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Preference number: 1 (lower is better) Translates to: FALSSTAGLMFTMSL*PFLPYLGALPHAPM Trigger: CATAGGAGCATGGGGAAGAGCACCCAAATATGGGAGAAAGGGGCAGAGGGACATTGTAAACATCAACCCTGCAGTAGAAGACAGAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR GCA 90 bp | CCATATTTGGGTGCTCTTCCCCATGCTCCTATGGCATCCTGCATGTaGATGATTCTATCAGCACTAATCTTACTGCCTGCAATTGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PYLGALPHAPMASCM*MILSALILLPAIVG Trigger: ACCAACAATTGCAGGCAGTAAGATTAGTGCTGATAGAATCATGCACATGCAGGATGCCATAGGAGCATGGGGAAGAGCACCCAAATATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR TCA 90 bp | TTGTTTCTTCTAACATTCTGCAGGAGGGAGTTCATTTTTCAATACTaGATGGGCTGCTGTAAACAGGTTATCTCCTGGGACCACTACAGC | + |
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Preference number: 1 (lower is better) Translates to: LFLLTFCRREFIFQY*MGCCKQVISWDHYS Trigger: GCTGTAGTGGTCCCAGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGAATGTTAGAAGAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR TCA 90 bp | TTAGTGGTTGAGTTTACAGGTGTGTGTCACCGCACCCACTTTAGCTaGTTAAATAAAAGGGTGTGTGAAACCACTTTCTGCCTCTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: LVVEFTGVCHRTHFS*LNKRVCETTFCLLV Trigger: CACTAAGAGGCAGAAAGTGGTTTCACACACCCTTTTATTTAATCAGCTAAAGTGGGTGCGGTGACACACACCTGTAAACTCAACCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCCTTTCTCCCATATTTaGGTGCTCTTCCCCATGCTC | + |
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Preference number: 2 (lower is better) Translates to: GVAPRGPHTITPQWTAPLPFSHI*VLFPML Trigger: GAGCATGGGGAAGAGCACCCAAATATGGGAGAAAGG...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CAA 90 bp | GTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCTGTTGTGGATaGAGTCCCAGCTCCAAAAGGACTCACACATTGCCTCCCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VWTMAGPCLSCLCCG*SPSSKRTHTLPPLP Trigger: AGGGAGGGGAGGCAATGTGTGAGTCCTTTTGGAGCTGGGACTCAATCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CAA 90 bp | CCCACACCACAGGCTCACACAGGTAGGAGGCAGGCAGGTTCAATCTaGCTGCCACATACTAATGACCACAGGCGGCCTGAGGTCTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: PTPQAHTGRRQAGSI*LPHTNDHRRPEVFE Trigger: CTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATGTGGCAGCAAGATTGAACCTGCCTGCCTCCTACCTGTGTGAGCCTGTGGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCGAGCTGTCTCTGTTGTaGATTGAGTCCCAGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: QGPSHHNPSVDSTTAEETELSLL*IESQLQ Trigger: TTGGAGCTGGGACTCAATCCACAACAGAGACAGCTC...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CAA 90 bp | AACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCTGTaGTGGATTGAGTCCCAGCTCCAAAAGGACTCACACATTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NLSVDHGRALLELSL*WIESQLQKDSHIAS Trigger: GGAGGCAATGTGTGAGTCCTTTTGGAGCTGGGACTCAATCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CAA 90 bp | ACCACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTaGAGCTGTCTCTGTTGTGGATTGAGTCCCAGCTCCAAAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: TTAEETSVWTMAGPC*SCLCCGLSPSSKRT Trigger: AGTCCTTTTGGAGCTGGGACTCAATCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCCAATGATCCAAGAGTaGAAAAATGGTCTGAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: GVAPRGPHTITPQWTAPLPMIQE*KNGLSH Trigger: ATGACTCAGACCATTTTTCCACTCTTGGATCATTGG...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCCAGGTTCAATCTTGCTaGCACATACTAATGACCACA | + |
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Preference number: 2 (lower is better) Translates to: QGPSHHNPSVDSTTAEETQVQSC*HILMTT Trigger: TGTGGTCATTAGTATGTGGCAGCAAGATTGAACCTG...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CAA 90 bp | GCAGGGTTGATGTTTACAATGTCCCTCTGCCCCTTTCTCCCATATTaGGGTGCTCTTCCCCATGCTCCTATGGCATCCTGCATGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: AGLMFTMSLCPFLPY*GALPHAPMASCMCM Trigger: CATGCACATGCAGGATGCCATAGGAGCATGGGGAAGAGCACCCAAATATGGGAGAAAGGGGCAGAGGGACATTGTAAACATCAACCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCTCCAGGAATTCAGTGTaGCTATCAGAAACCACTAAA | + |
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Preference number: 2 (lower is better) Translates to: QGPSHHNPSVDSTTAEETSRNSV*LSETTK Trigger: TTTAGTGGTTTCTGATAGTCACACTGAATTCCTGGA...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAGCAACCTCTGCCTCCTaGGTTCAAGCGTCTACTGCC | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQAATSAS*VQASTA Trigger: GGCAGTAGACGCTTGAACCCAGGAGGCAGAGGTTGC...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCTTCATTTTTCAATACTaGATGGGCTGCTGTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: QGPSHHNPSVDSTTAEETFIFQY*MGCCKQ Trigger: CTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAA...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCTTCTACATTTCAAAATaGAATGACCATAGCGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QGPSHHNPSVDSTTAEETFYISK*NDHSGG Trigger: TCCTCCGCTATGGTCATTCCATTTTGAAATGTAGAA...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAACCATAACCCCTCAGTaGACAGCACCACTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQATITPQ*TAPLQR Trigger: CCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCATCATTAATGGCCAATaGTCCAAGAGTGGAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: TAEETSVWTMAGPCLSCLIINGQ*SKSGKM Trigger: CATTTTTCCACTCTTGGATCATTGGCCATTAATGAT...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR GCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAAGCACTCAAACCTGGTaGCTCAAACACAGTAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQASTQTW*LKHSRC Trigger: GCACCTACTGTGTTTGAGGCACCAGGTTTGAGTGCT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR GCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAAAAGGACTCACACATTaGCTCCCCTCCCTCCATTTC | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQAKGLTH*LPSLHF Trigger: GAAATGGAGGGAGGGGAGGCAATGTGTGAGTCCTTT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTCCATGTTGGCCAGGCTaGTCTCAAACGCCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPPCWPG*SQTPDL Trigger: GAGGTCAGGCGTTTGAGACCAGCCTGGCCAACATGG...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAAGCCTCCTGAGTAGCTaGGATTACAAGTATGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQASLLSS*DYKYAP Trigger: TGGCGCATACTTGTAATCCCAGCTACTCAGGAGGCT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCGGAAATGAAGTAGGTTaGTATGTTTTAGTTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TAEETSVWTMAGPCLSCLGNEVG*YVLVVC Trigger: ACACACAACTAAAACATACCAACCTACTTCATTTCC...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAGGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTACCTCCTCACCTAAGATaGAGCCTCCATCAGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: SAGGSSFFNTEWAAVNRLPPHLR*SLHQLT Trigger: GGTGAGCTGATGGAGGCTTCATCTTAGGTGAGGAGG...TAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCACAGGTTGAAGTGCAATaGTGTGATCTTGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQAQVEVQ*CDLGSL Trigger: CAGTGAGCCAAGATCACACCATTGCACTTCAACCTG...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAATGAGCCACCATGTCTaGCCCAGAAAGCATTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQAMSHHV*PRKHFD Trigger: ATCAAAATGCTTTCTGGGCCAGACATGGTGGCTCAT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAAAACAGGTTATCTCCTaGGACCACTACAGCTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQAKQVIS*DHYSLR Trigger: CCTTAAGCTGTAGTGGTCCCAGGAGATAACCTGTTT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CAA 90 bp | TGCTGCCACATACTAATGACCACAGGCGGCCTGAGGTCTTTGAGGTaGTTTCTTCTAACATTCTGCAGGAGGGAGTTCATTTTTCAATAC | + |
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Preference number: 2 (lower is better) Translates to: CCHILMTTGGLRSLR*FLLTFCRREFIFQY Trigger: GTATTGAAAAATGAACTCCCTCCTGCAGAATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATGTGGCAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CAA 90 bp | CAATCTTGCTGCCACATACTAATGACCACAGGCGGCCTGAGGTCTTaGAGGTTGTTTCTTCTAACATTCTGCAGGAGGGAGTTCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: QSCCHILMTTGGLRS*RLFLLTFCRREFIF Trigger: AAAAATGAACTCCCTCCTGCAGAATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATGTGGCAGCAAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR GCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCATTTGTGAGCATATCGTaGTTGATAATGAACACGCAC | + |
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Preference number: 2 (lower is better) Translates to: QWQFISASHKTTKTGIQAFVSIS*LIMNTH Trigger: GTGCGTGTTCATTATCAAGCACGATATGCTCACAAA...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTGCTTTACTGTGTCACTaGGACATGTTGTTTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPALLCH*DMLFET Trigger: GGTCTCAAACAACATGTCTCAGTGACACAGTAAAGC...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTATGGCATCCTGCATGTaGATGATTCTATCAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPMASCM*MILSAL Trigger: TAGTGCTGATAGAATCATGCACATGCAGGATGCCAT...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR TCA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTCTTCTACTGCAGGGTTaGTGTTTACAATGTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KTALLSANFCFTVSLRHVLLLQG*CLQCPS Trigger: AGAGGGACATTGTAAACATCAACCCTGCAGTAGAAG...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTCTTTCAGCCAATTTCTaGTTTACTGTGTCACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPLSANF*FTVSLR Trigger: TCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAG...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CCA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGATTTTGATAAAACTCTaGTTCCCAGCACTCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: STNLTACNCWFKHLPPQKILIKL*FPALKP Trigger: AGGTTTGAGTGCTGGGAACCAGAGTTTTATCAAAAT...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR GCA 90 bp | CACACATTCAGCTCATTTACAGACAAACCATCCACAAGTTGGATTTTCTACATTAGAGAAATCATGCTTTaGTCTGTCTTCTACTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HTFSSFTDKPSTSWIFYIREIML*SVFYCR Trigger: CCTGCAGTAGAAGACAGAGCAAAGCATGATTTCTCT...AATGTAGAAAATCCAACTTGTGGATGGTTTGTCTGTAAATGAGCTGAATGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR TCA 72 bp | CACCTCATTGCAGAAACCACCAGTCACCAGCTCCACTaGCCACCTGCCATCCAGCTGGCTGGAGCCGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: HLIAETTSHQLH*PPAIQLAGAEC Trigger: GCACTCGGCTCCAGCCAGCTGGATGGCAGGTGGTCAGTGGAGCTGGTGACTGGTGGTTTCTGCAATGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR GCA 72 bp | TGCAGAAACCACCAGTCACCAGCTCCACTGACCACCTaGCATCCAGCTGGCTGGAGCCGAGTGCTCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: CRNHQSPAPLTT*HPAGWSRVLCR Trigger: TCTGCAGAGCACTCGGCTCCAGCCAGCTGGATGGCAGGTGGTCAGTGGAGCTGGTGACTGGTGGTTTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR CCA 72 bp | GTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTaGACAGCACCACTGCAGAGGAAACCTCAGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: VAPRGPHTITPQ*TAPLQRKPQCG Trigger: TCCACACTGAGGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CAA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCTGAGGTCTTTGAGGTaGTTTCTTCTAACATTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GVAPRGPHTITPQWTAPLLRSLR*FLLTFC Trigger: GCAGAATGTTAGAAGAAACAACCTCAAAGACCTCAG...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCGTGAGCATATCGTGCTaGATAATGAACACGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: TAEETSVWTMAGPCLSCLVSISC*IMNTHT Trigger: TGTGTGCGTGTTCATTATCAAGCACGATATGCTCAC...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR-3UTR CAA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAATGGCAGGGCCCTGCTaGAGCTGTCTCTGTTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QWQFISASHKTTKTGIQAMAGPC*SCLCCG Trigger: TCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCAT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR GCA 72 bp | CTGCCCCTTTCTCCCATATTTGGGTGCTCTTCCCCATaGTCCTATGGCATCCTGCATGTGCATGATTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: LPLSPIFGCSSP*SYGILHVHDSI Trigger: GATAGAATCATGCACATGCAGGATGCCATAGGAGCATGGGGAAGAGCACCCAAATATGGGAGAAAGGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR TCA 72 bp | ATGATACTTGCTGAAGAGGCTTCCCTTAGGCTAATCTaGCACCTCATTGCAGAAACCACCAGTCACCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: MILAEEASLRLI*HLIAETTSHQL Trigger: GAGCTGGTGACTGGTGGTTTCTGCAATGAGGTGTCAGATTAGCCTAAGGGAAGCCTCTTCAGCAAGTATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTGCTCTGTTGACCAGGTaGAAGTGCAATGGTGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPALLTR*KCNGVI Trigger: GATCACACCATTGCACTTCAACCTGGTCAACAGAGC...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR TCA 72 bp | AGAAATCATGCTTTGCTCTGTCTTCTACTGCAGGGTTaGTGTTTACAATGTCCCTCTGCCCCTTTCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RNHALLCLLLQG*CLQCPSAPFSH Trigger: ATGGGAGAAAGGGGCAGAGGGACATTGTAAACATCAACCCTGCAGTAGAAGACAGAGCAAAGCATGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR CCA 72 bp | CATTTTGATAAAACTCTGGTTCCCAGCACTCAAACCTaGTGCCTCAAACACAGTAGGTGCACTGCAAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: HFDKTLVPSTQT*CLKHSRCTANV Trigger: CACATTTGCAGTGCACCTACTGTGTTTGAGGCACCAGGTTTGAGTGCTGGGAACCAGAGTTTTATCAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCAGGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTACTCTTCTCCATGAACTaGCAGGGGCATGTACCATTA | + |
|
Preference number: 3 (lower is better) Translates to: SAGGSSFFNTEWAAVNRLLFSMN*QGHVPL Trigger: TAATGGTACATGCCCCTGCAAGTTCATGGAGAAGAG...TAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR TCA 72 bp | CTAACATTCTGCAGGAGGGAGTTCATTTTTCAATACTaGATGGGCTGCTGTAAACAGGTTATCTCCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTFCRREFIFQY*MGCCKQVISWD Trigger: GTCCCAGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGAATGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR TCA 72 bp | GAGTTTACAGGTGTGTGTCACCGCACCCACTTTAGCTaGTTAAATAAAAGGGTGTGTGAAACCACTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EFTGVCHRTHFS*LNKRVCETTFC Trigger: GCAGAAAGTGGTTTCACACACCCTTTTATTTAATCAGCTAAAGTGGGTGCGGTGACACACACCTGTAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTGGCCCAGAAAGCATTTaGATAAAACTCTGGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPGPESI*IKLWFP Trigger: TGGGAACCAGAGTTTTATCAAAATGCTTTCTGGGCC...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR-3UTR CAA 90 bp | CACACATTCAGCTCATTTACAGACAAACCATCCACAAGTTGGATTTTCTACATTCGGAGTCTCGCTCTGTaGACCAGGTTGAAGTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: HTFSSFTDKPSTSWIFYIRSLAL*TRLKCN Trigger: ATTGCACTTCAACCTGGTCAACAGAGCGAGACTCCG...AATGTAGAAAATCCAACTTGTGGATGGTTTGTCTGTAAATGAGCTGAATGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR CCA 72 bp | CATTTCTCCCCTCCTGGCAGCAGGCTAAAAGCAATATaGGTAATAGCTAAGTATTATTTGAGACAGGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HFSPPGSRLKAI*VIAKYYLRQGL Trigger: AAGACCCTGTCTCAAATAATACTTAGCTATTACCCATATTGCTTTTAGCCTGCTGCCAGGAGGGGAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR GCA 72 bp | CTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTaGCTCCCCAGAAGACTTGAGGGCAGAAAACTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LILLPAIVGLNI*LPRRLEGRKLF Trigger: AAAAAGTTTTCTGCCCTCAAGTCTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR GCA 72 bp | CAAGGCTTAAAGTACTGTGCATTTGTGAGCATATCGTaGTTGATAATGAACACGCACACACATTCAGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QGLKYCAFVSIS*LIMNTHTHSAH Trigger: ATGAGCTGAATGTGTGTGCGTGTTCATTATCAAGCACGATATGCTCACAAATGCACAGTACTTTAAGCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTTCTTCTACTGCAGGGTaGATGTTTACAATGTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTALLSANFCFTVSLRHVSSTAG*MFTMSL Trigger: GAGGGACATTGTAAACATCAACCCTGCAGTAGAAGA...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| 3UTR-3UTR CAA 90 bp | CACACATTCAGCTCATTTACAGACAAACCATCCACAAGTTGGATTTTCTACATTGTTCTAAGCCCTGTCTaGATAAAGTTTGAGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: HTFSSFTDKPSTSWIFYIVLSPV*IKFERL Trigger: CAATCTCTCAAACTTTATCAAGACAGGGCTTAGAAC...AATGTAGAAAATCCAACTTGTGGATGGTTTGTCTGTAAATGAGCTGAATGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGAGTGGACAGCACCACTaGAGAGGAAACCTCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVAPRGPHTITPQWTAPLSGQHH*RGNLSV Trigger: CACACTGAGGTTTCCTCTGCAGTGGTGCTGTCCACT...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR CCA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCCAGAGCGAGGCCAGATaGCCTGTCACCCCACGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAEETSVWTMAGPCLSCLQSEAR*PVTPRL Trigger: AAGGCGTGGGGTGACAGGCCATCTGGCCTCGCTCTG...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGAGCCTCCTGAGTAGCTaGGATTACAAGTATGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVAPRGPHTITPQWTAPLSLLSS*DYKYAP Trigger: TGGCGCATACTTGTAATCCCAGCTACTCAGGAGGCT...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGAATCTGACACCTCATTaGAGAAACCACCAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GVAPRGPHTITPQWTAPLNLTPH*RNHQSP Trigger: TGGTGACTGGTGGTTTCTGCAATGAGGTGTCAGATT...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR CAA 72 bp | GAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTaGAGCTGTCTCTGTTGTGGATTGAGTCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EETSVWTMAGPC*SCLCCGLSPSS Trigger: GGAGCTGGGACTCAATCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGTACATTGAACACAGCTaGGCATTACTCACATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVAPRGPHTITPQWTAPLYIEHS*ALLTSD Trigger: GTCAGATGTGAGTAATGCTCAGCTGTGTTCAATGTA...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR GCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCAGCACTCAAACCTGGTaGCTCAAACACAGTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHHNPSVDSTTAEETSTQTW*LKHSRC Trigger: GCACCTACTGTGTTTGAGGCACCAGGTTTGAGTGCT...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR GCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGGTTCAATCTTGCTaGCACATACTAATGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVAPRGPHTITPQWTAPLQVQSC*HILMTT Trigger: TGTGGTCATTAGTATGTGGCAGCAAGATTGAACCTG...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR TCA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGTCCAGGAATTCAGTGTaGCTATCAGAAACCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVAPRGPHTITPQWTAPLSRNSV*LSETTK Trigger: TTTAGTGGTTTCTGATAGTCACACTGAATTCCTGGA...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR CCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCACATTTCTCCCCTCCTaGCAGCAGGCTAAAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHHNPSVDSTTAEETTFLPS*QQAKSN Trigger: ATTGCTTTTAGCCTGCTGCCAGGAGGGGAGAAATGT...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR CCA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCCAGGTTGAAGTGCAATaGTGTGATCTTGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TAEETSVWTMAGPCLSCLQVEVQ*CDLGSL Trigger: CAGTGAGCCAAGATCACACCATTGCACTTCAACCTG...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR TCA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCTTTTTCTCTTCTCCATaGACTTGCAGGGGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TAEETSVWTMAGPCLSCLFFSSP*TCRGMY Trigger: GTACATGCCCCTGCAAGTTCATGGAGAAGAGAAAAA...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR TCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCCGCACCCACTTTAGCTaGTTAAATAAAAGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHHNPSVDSTTAEETRTHFS*LNKRVC Trigger: ACACACCCTTTTATTTAATCAGCTAAAGTGGGTGCG...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR GCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCATGGCATCCTGCATGTaGATGATTCTATCAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHHNPSVDSTTAEETMASCM*MILSAL Trigger: TAGTGCTGATAGAATCATGCACATGCAGGATGCCAT...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR GCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCTTTACAATGTCCCTCTaGCCCTTTCTCCCATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHHNPSVDSTTAEETFTMSL*PFLPYL Trigger: CAAATATGGGAGAAAGGGGCAGAGGGACATTGTAAA...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAGGGAGAACTGCAGACTaGCAGAGCGAGGCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QWQFISASHKTTKTGIQAGRTAD*QSEARW Trigger: CCATCTGGCCTCGCTCTGCCAGTCTGCAGTTCTCCC...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCAGAGAAATCATGCTTTaGTCTGTCTTCTACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAEETSVWTMAGPCLSCLREIML*SVFYCR Trigger: CCTGCAGTAGAAGACAGAGCAAAGCATGATTTCTCT...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR TCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCACCTCCTCACCTAAGATaGAGCCTCCATCAGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QWQFISASHKTTKTGIQAPPHLR*SLHQLT Trigger: GGTGAGCTGATGGAGGCTTCATCTTAGGTGAGGAGG...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR CCA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCATTTTGATAAAACTCTaGTTCCCAGCACTCAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHHNPSVDSTTAEETILIKL*FPALKP Trigger: AGGTTTGAGTGCTGGGAACCAGAGTTTTATCAAAAT...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR CCA 90 bp | CATACTAATGACCACAGGCGGCCTGAGGTCTTTGAGGTTGTTTCTTCTAACATTGAGGAAACCTCAGTGTaGACCATGGCAGGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTNDHRRPEVFEVVSSNIEETSV*TMAGPC Trigger: GCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTC...AATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | CATACTAATGACCACAGGCGGCCTGAGGTCTTTGAGGTTGTTTCTTCTAACATTTGCCATCCAGCTGGCTaGAGCCGAGTGCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTNDHRRPEVFEVVSSNICHPAG*SRVLCR Trigger: TCTGCAGAGCACTCGGCTCCAGCCAGCTGGATGGCA...AATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTCCAGAGCCAGGGCCTTaGTACCACACCCACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPPEPGP*YHTHTT Trigger: TGTGGTGTGGGTGTGGTACCAAGGCCCTGGCTCTGG...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR CAA 72 bp | TGCCACATACTAATGACCACAGGCGGCCTGAGGTCTTaGAGGTTGTTTCTTCTAACATTCTGCAGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CHILMTTGGLRS*RLFLLTFCRRE Trigger: CTCCCTCCTGCAGAATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTCAGGAGCCAACAGACTaGCCAGAGCCAGGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTALLSANFCFTVSLRHVQEPTD*PEPGPW Trigger: CCAAGGCCCTGGCTCTGGGCAGTCTGTTGGCTCCTG...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTCTGGCTGGAGCCGAGTaGTCTGCAGACTCAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPLAGAE*SADSEV Trigger: GACTTCTGAGTCTGCAGAGCACTCGGCTCCAGCCAG...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAGAGCTGTCTCTGTTGTaGATTGAGTCCCAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QWQFISASHKTTKTGIQAELSLL*IESQLQ Trigger: TTGGAGCTGGGACTCAATCCACAACAGAGACAGCTC...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTCACCTGCCATCCAGCTaGCTGGAGCCGAGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTALLSANFCFTVSLRHVHLPSS*LEPSAL Trigger: CAGAGCACTCGGCTCCAGCCAGCTGGATGGCAGGTG...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTACCATAACCCCTCAGTaGACAGCACCACTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPTITPQ*TAPLQR Trigger: CCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGT...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCACTTTGTGGGAGGCAATaGCAATTCATATCGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QWQFISASHKTTKTGIQALCGRQ*QFISAS Trigger: AGAGGCCGATATGAATTGCCATTGCCTCCCACAAAG...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGCTGATCTCGAACTCCTaGGCTCAAGTAATCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: STNLTACNCWFKHLPPQKLISNS*AQVILP Trigger: CGGGAGGATTACTTGAGCCCAGGAGTTCGAGATCAG...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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| CDS-3UTR TCA 90 bp | TCTGCAGGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTAACCGGGATCCAGGCATaGTACTTGCTGAAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSSFFNTEWAAVNRLTGIQA*YLLKRL Trigger: AAGCCTCTTCAGCAAGTATCATGCCTGGATCCCGGT...TAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTCCATGTTGGCCAGGCTaGTCTCAAACGCCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTALLSANFCFTVSLRHVPCWPG*SQTPDL Trigger: GAGGTCAGGCGTTTGAGACCAGCCTGGCCAACATGG...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTGCAACCTCTGCCTCCTaGGTTCAAGCGTCTACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTALLSANFCFTVSLRHVATSAS*VQASTA Trigger: GGCAGTAGACGCTTGAACCCAGGAGGCAGAGGTTGC...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | CATACTAATGACCACAGGCGGCCTGAGGTCTTTGAGGTTGTTTCTTCTAACATTCCTTTCTCCCATATTTaGGTGCTCTTCCCCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTNDHRRPEVFEVVSSNIPFSHI*VLFPML Trigger: GAGCATGGGGAAGAGCACCCAAATATGGGAGAAAGG...AATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR CAA 72 bp | GAGAAATCATGCTTTGCTCTGTCTTCTACTGCAGGGTaGATGTTTACAATGTCCCTCTGCCCCTTTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKSCFALSSTAG*MFTMSLCPFLP Trigger: TGGGAGAAAGGGGCAGAGGGACATTGTAAACATCAACCCTGCAGTAGAAGACAGAGCAAAGCATGATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | CATACTAATGACCACAGGCGGCCTGAGGTCTTTGAGGTTGTTTCTTCTAACATTTCCCTTAGGCTAATCTaGCACCTCATTGCAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HTNDHRRPEVFEVVSSNISLRLI*HLIAET Trigger: GGTTTCTGCAATGAGGTGTCAGATTAGCCTAAGGGA...AATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTAAAAGGACTCACACATTaGCTCCCCTCCCTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGGSSFFNTEWAAVNRLKGLTH*LPSLHF Trigger: GAAATGGAGGGAGGGGAGGCAATGTGTGAGTCCTTT...TAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR CAA 72 bp | ATACTAATGACCACAGGCGGCCTGAGGTCTTTGAGGTaGTTTCTTCTAACATTCTGCAGGAGGGAGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILMTTGGLRSLR*FLLTFCRREFI Trigger: AATGAACTCCCTCCTGCAGAATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAAGGCTTAAAGTACTGTaGATTTGTGAGCATATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QWQFISASHKTTKTGIQARLKVL*ICEHIV Trigger: CACGATATGCTCACAAATGCACAGTACTTTAAGCCT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | CACACATTCAGCTCATTTACAGACAAACCATCCACAAGTTGGATTTTCTACATTACCATGGCAGGGCCCTaGTTGAGCTGTCTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTFSSFTDKPSTSWIFYITMAGP*LSCLCC Trigger: ACAACAGAGACAGCTCAAGCAGGGCCCTGCCATGGT...AATGTAGAAAATCCAACTTGTGGATGGTTTGTCTGTAAATGAGCTGAATGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | CACACATTCAGCTCATTTACAGACAAACCATCCACAAGTTGGATTTTCTACATTTGGAGCCGAGTGCTCTaGAGACTCAGAAGTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTFSSFTDKPSTSWIFYIWSRVL*RLRSPR Trigger: CCTTGGACTTCTGAGTCTGCAGAGCACTCGGCTCCA...AATGTAGAAAATCCAACTTGTGGATGGTTTGTCTGTAAATGAGCTGAATGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTCTTCTACTGCAGGGTTaGTGTTTACAATGTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPLLLQG*CLQCPS Trigger: AGAGGGACATTGTAAACATCAACCCTGCAGTAGAAG...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGCTGAGACATGTTGTTTaGGACCCCTCATCATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: STNLTACNCWFKHLPPQKLRHVV*DPSSLM Trigger: CATTAATGATGAGGGGTCTCAAACAACATGTCTCAG...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTAGGCAGGTTCAATCTTaGTGCCACATACTAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPRQVQS*CHILMT Trigger: GGTCATTAGTATGTGGCAGCAAGATTGAACCTGCCT...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTACCACTAAAAATGAATaGAGTGCTGGGGAGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPTTKNE*SAGENC Trigger: GCAGTTCTCCCCAGCACTGCATTCATTTTTAGTGGT...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCATTCTACATTTCAAAATaGAATGACCATAGCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QWQFISASHKTTKTGIQAFYISK*NDHSGG Trigger: TCCTCCGCTATGGTCATTCCATTTTGAAATGTAGAA...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | CACACATTCAGCTCATTTACAGACAAACCATCCACAAGTTGGATTTTCTACATTCCTCCCTCCATTTCCTaGCACATAGGTGGCTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTFSSFTDKPSTSWIFYIPPSIS*HIGGYS Trigger: AGAATAGCCACCTATGTGTCAGGAAATGGAGGGAGG...AATGTAGAAAATCCAACTTGTGGATGGTTTGTCTGTAAATGAGCTGAATGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | CACACATTCAGCTCATTTACAGACAAACCATCCACAAGTTGGATTTTCTACATTGTCTCTGTTGTGGATTaGGTCCCAGCTCCAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTFSSFTDKPSTSWIFYIVSVVD*VPAPKG Trigger: TCCTTTTGGAGCTGGGACTCAATCCACAACAGAGAC...AATGTAGAAAATCCAACTTGTGGATGGTTTGTCTGTAAATGAGCTGAATGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAAGAAAAGAGAAATCATaGTTTGCTCTGTCTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QWQFISASHKTTKTGIQARKEKS*FALSST Trigger: AGTAGAAGACAGAGCAAAGCATGATTTCTCTTTTCT...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR GCA 90 bp | CATACTAATGACCACAGGCGGCCTGAGGTCTTTGAGGTTGTTTCTTCTAACATTTTTGTGAGCATATCGTaGTTGATAATGAACACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTNDHRRPEVFEVVSSNIFVSIS*LIMNTH Trigger: GTGCGTGTTCATTATCAAGCACGATATGCTCACAAA...AATGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCCTGTGGTCATTAGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| 3UTR CAA 72 bp | TGGGCACATTTCATCTCAAAGATGTGGTCCCATATTTaGTCCATTTTTCTTTGTGGGAGGCAATGGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: WAHFISKMWSHI*SIFLCGRQWQF Trigger: GAATTGCCATTGCCTCCCACAAAGAAAAATGGACAAAATATGGGACCACATCTTTGAGATGAAATGTGCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGATCATTAATGGCCAATaGTCCAAGAGTGGAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: STNLTACNCWFKHLPPQKIINGQ*SKSGKM Trigger: CATTTTTCCACTCTTGGATCATTGGCCATTAATGAT...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTGCTTTACTGTGTCACTaGGACATGTTGTTTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KTALLSANFCFTVSLRHVALLCH*DMLFET Trigger: GGTCTCAAACAACATGTCTCAGTGACACAGTAAAGC...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGTTCATTTTTCAATACTaGATGGGCTGCTGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: STNLTACNCWFKHLPPQKFIFQY*MGCCKQ Trigger: CTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAA...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR TCA 90 bp | AAAACAGCTTTGCTTTCAGCCAATTTCTGCTTTACTGTGTCACTGAGACATGTTAGTCTCCTTAGTGGTTaGGTTTACAGGTGTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTALLSANFCFTVSLRHVSLLSG*VYRCVS Trigger: TGACACACACCTGTAAACTCAACCACTAAGGAGACT...AACATGTCTCAGTGACACAGTAAAGCAGAAATTGGCTGAAAGCAAAGCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTCCAATGATCCAAGAGTaGAAAAATGGTCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPPMIQE*KNGLSH Trigger: ATGACTCAGACCATTTTTCCACTCTTGGATCATTGG...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CCA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGGGAAATGAAGTAGGTTaGTATGTTTTAGTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: STNLTACNCWFKHLPPQKGNEVG*YVLVVC Trigger: ACACACAACTAAAACATACCAACCTACTTCATTTCC...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGGGTCTTGTTATGTaGCTCAGGCTGATCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVAPRGPHTITPQWTAPLQGLVM*LRLISN Trigger: GTTCGAGATCAGCCTGAGCAACATAACAAGACCCTG...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGCTCCCAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGGTGAGCATATCGTGCTaGATAATGAACACGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: GVAPRGPHTITPQWTAPLVSISC*IMNTHT Trigger: TGTGTGCGTGTTCATTATCAAGCACGATATGCTCAC...CAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTGGGAGCCACGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCGGCGGCCTGAGGTCTTaGAGGTTGTTTCTTCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: TAEETSVWTMAGPCLSCLGGLRS*RLFLLT Trigger: TGTTAGAAGAAACAACCTCAAAGACCTCAGGCCGCC...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCAAGAGAAATCATGCTTaGCTCTGTCTTCTACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TAEETSVWTMAGPCLSCLKRNHA*LCLLLQ Trigger: CTGCAGTAGAAGACAGAGCAAAGCATGATTTCTCTT...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCGTTCTAAGCCCTGTCTaGATAAAGTTTGAGAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: QGPSHHNPSVDSTTAEETVLSPV*IKFERL Trigger: CAATCTCTCAAACTTTATCAAGACAGGGCTTAGAAC...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGAGGAAACCTCAGTGTGGACCATGGCAGGGCCCTGCTTGAGCTGTCTCGCAGTTAACCTTTTATaGTCCCTCCCCTTGTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TAEETSVWTMAGPCLSCLAVNLL*SLPLYL Trigger: AAGATACAAGGGGAGGGACAATAAAAGGTTAACTGC...GAGACAGCTCAAGCAGGGCCCTGCCATGGTCCACACTGAGGTTTCCTCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | CAGGGGCCCTCACACCATAACCCCTCAGTGGACAGCACCACTGCAGAGGAAACCATGTGGTCCCATATTTaGTCCATTTTTCTTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGPSHHNPSVDSTTAEETMWSHI*SIFLCG Trigger: CCCACAAAGAAAAATGGACAAAATATGGGACCACAT...GGTTTCCTCTGCAGTGGTGCTGTCCACTGAGGGGTTATGGTGTGAGGGCCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | CAATGGCAATTCATATCGGCCTCTCATAAAACAACCAAGACCGGGATCCAGGCAGCTCTGTTGACCAGGTaGAAGTGCAATGGTGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: QWQFISASHKTTKTGIQAALLTR*KCNGVI Trigger: GATCACACCATTGCACTTCAACCTGGTCAACAGAGC...TGCCTGGATCCCGGTCTTGGTTGTTTTATGAGAGGCCGATATGAATTGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTATGGCAGGGCCCTGCTaGAGCTGTCTCTGTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPMAGPC*SCLCCG Trigger: TCCACAACAGAGACAGCTCAAGCAGGGCCCTGCCAT...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGCGGAGTCTCGCTCTGTaGACCAGGTTGAAGTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: STNLTACNCWFKHLPPQKRSLAL*TRLKCN Trigger: ATTGCACTTCAACCTGGTCAACAGAGCGAGACTCCG...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTACTTGAGCTGTCTCTGTaGTGGATTGAGTCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAGGSSFFNTEWAAVNRLLELSL*WIESQL Trigger: GAGCTGGGACTCAATCCACAACAGAGACAGCTCAAG...TAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | AGCACTAATCTTACTGCCTGCAATTGTTGGTTTAAACATCTGCCTCCCCAGAAGCTCTTCTCCATGAACTaGCAGGGGCATGTACCATTA | + |
|
Preference number: 5 (lower is better) Translates to: STNLTACNCWFKHLPPQKLFSMN*QGHVPL Trigger: TAATGGTACATGCCCCTGCAAGTTCATGGAGAAGAG...CTTCTGGGGAGGCAGATGTTTAAACCAACAATTGCAGGCAGTAAGATTAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTATCTCCTTGTCTCTGTTGTGGATaGAGTCCCAGCTCCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSSFFNTEWAAVNRLSPCLCCG*SPSSKR Trigger: CCTTTTGGAGCTGGGACTCAATCCACAACAGAGACA...AGGAGATAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTAGGCCCAGAAAGCATTTaGATAAAACTCTGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGGSSFFNTEWAAVNRLGPESI*IKLWFP Trigger: TGGGAACCAGAGTTTTATCAAAATGCTTTCTGGGCC...TAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306024.4 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGAGGGAGTTCATTTTTCAATACTGAATGGGCTGCTGTAAACAGGTTACTGAGGTCTTTGAGGTaGTTTCTTCTAACATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAGGSSFFNTEWAAVNRLLRSLR*FLLTFC Trigger: GCAGAATGTTAGAAGAAACAACCTCAAAGACCTCAG...TAACCTGTTTACAGCAGCCCATTCAGTATTGAAAAATGAACTCCCTCCTGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306024.4 |
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