RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRTM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000146006

Ensembl transcript IDs: ENST00000274711.7, ENST00000518785.1, ENST00000521094.2, ENST00000523537.1

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGACTGTGGCATAGGATGGAGTGTTCCCACCGACCTTGGAAACTaGCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCC +
Preference number: 1 (lower is better)
Translates to: QDCGIGWSVPTDLGN*PARRPEHIFGRCIP
Trigger: GGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCACAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CCA 90 bp GTGTGGTCAGGACTGTGGCATAGGATGGAGTGTTCCCACCGACCTTaGAAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTG +
Preference number: 1 (lower is better)
Translates to: VWSGLWHRMECSHRP*KLPSQEARAHIRAL
Trigger: CAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCACAGTCCTGACCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CCA 90 bp TGGACTGCATCTAGAATATCCTCTCCTTGGGTGTGGTCAGGACTGTaGCATAGGATGGAGTGTTCCCACCGACCTTGGAAACTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: WTASRISSPWVWSGL*HRMECSHRPWKLPS
Trigger: GCTGGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCACAGTCCTGACCACACCCAAGGAGAGGATATTCTAGATGCAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR GCA 90 bp ATAGGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTaGTCTATGCTGTTAAATCAGCTTCTGTCTCTGCCCAGACAAGCC +
Preference number: 1 (lower is better)
Translates to: IGASNSACLWGSRAL*SMLLNQLLSLPRQA
Trigger: GGCTTGTCTGGGCAGAGACAGAAGCTGATTTAACAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR TCA 90 bp TTCGGGCGCTGCATTCCCACAGATTGCCAGAGAGACCAACGGTTGTaGGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTA +
Preference number: 1 (lower is better)
Translates to: FGRCIPTDCQRDQRL*GISGSLRSWNQGCL
Trigger: TAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCAGCGCCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 90 bp TTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCTaGACCATTGAGCACTGCCTAATTCTTCTTAAAGTGGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: FDIWSRVWDRSCLWF*TIEHCLILLKVGGQ
Trigger: CTGCCCTCCCACTTTAAGAAGAATTAGGCAGTGCTCAATGGTTCAGAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR GCA 90 bp TTAATCCCTCACCTCTGTGCTGCCTTCAAGTTACCACTGTGTGGCTaGATAGGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTG +
Preference number: 1 (lower is better)
Translates to: LIPHLCAAFKLPLCG*IGMSSCSAMRFISV
Trigger: CACTGAGATGAATCTCATGGCAGAACAACTCGACATGCCTATGCAGCCACACAGTGGTAACTTGAAGGCAGCACAGAGGTGAGGGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CCA 90 bp CCTTTTAATCCCTCACCTCTGTGCTGCCTTCAAGTTACCACTGTGTaGCTGCATAGGCATGTCGAGTTGTTCTGCCATGAGATTCATCTC +
Preference number: 1 (lower is better)
Translates to: PFNPSPLCCLQVTTV*LHRHVELFCHEIHL
Trigger: GAGATGAATCTCATGGCAGAACAACTCGACATGCCTATGCAGCCACACAGTGGTAACTTGAAGGCAGCACAGAGGTGAGGGATTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CCA 90 bp AGCCATTGTTCCCGTAATTACCCGCTGAGTGAAGATGGCATTGTCTaGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGT +
Preference number: 1 (lower is better)
Translates to: SHCSRNYPLSEDGIV*FRKVFLGSNCYACS
Trigger: ACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGACAATGCCATCTTCACTCAGCGGGTAATTACGGGAACAATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 90 bp TTTCTAAAGTGCCCCAGGTCCACTCCATCCCACATGTCAAGTTGCTaGTTTTGTTCCATTGTAAGAAGAGCGTGTGCAGACTGCTTAGCC +
Preference number: 1 (lower is better)
Translates to: FLKCPRSTPSHMSSC*FCSIVRRACADCLA
Trigger: GGCTAAGCAGTCTGCACACGCTCTTCTTACAATGGAACAAAATCAGCAACTTGACATGTGGGATGGAGTGGACCTGGGGCACTTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 90 bp GTTGTAGCCATGACAGTGACAGTGGTTGACAAATTCCAGCAGAGCTaGAATCCATGGACTGCATCTAGAATATCCTCTCCTTGGGTGTGG +
Preference number: 1 (lower is better)
Translates to: VVAMTVTVVDKFQQS*NPWTASRISSPWVW
Trigger: CCACACCCAAGGAGAGGATATTCTAGATGCAGTCCATGGATTTCAGCTCTGCTGGAATTTGTCAACCACTGTCACTGTCATGGCTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR GCA 90 bp TCTACCCCTCTTCCCTTTTCAGCAGCAGGTCCTTTCCCTGTTTGGTaGAGATTGTGTATAATCATTGTTGGCTGCCTTGTAACTCCAGCT +
Preference number: 1 (lower is better)
Translates to: STPLPFSAAGPFPVW*RLCIIIVGCLVTPA
Trigger: AGCTGGAGTTACAAGGCAGCCAACAATGATTATACACAATCTGCACCAAACAGGGAAAGGACCTGCTGCTGAAAAGGGAAGAGGGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CCA 90 bp GTGGTGCTCTTATTTGTAATAGGGGCTTCTAATTCAGCCTGTCTGTaGGGAAGTAGGGCGCTGTGCTCTATGCTGTTAAATCAGCTTCTG +
Preference number: 1 (lower is better)
Translates to: VVLLFVIGASNSACL*GSRALCSMLLNQLL
Trigger: CAGAAGCTGATTTAACAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCCTATTACAAATAAGAGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR GCA 90 bp CTTCAAGTTACCACTGTGTGGCTGCATAGGCATGTCGAGTTGTTCTaGCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACT +
Preference number: 1 (lower is better)
Translates to: LQVTTVWLHRHVELF*HEIHLSGAVFFTYT
Trigger: AGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCCTATGCAGCCACACAGTGGTAACTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR GCA 90 bp GAAGATGGCATTGTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTaGTATGCCTGCAGTAGTTGGGATTTCTTTGTCTCCCACATGGTA +
Preference number: 1 (lower is better)
Translates to: EDGIVWFRKVFLGSN*YACSSWDFFVSHMV
Trigger: TACCATGTGGGAGACAAAGAAATCCCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGACAATGCCATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 90 bp GTGTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTaGCAAATGGCAATGGTCATCCTGATAAATGGGTTGGTAAATTTT +
Preference number: 1 (lower is better)
Translates to: VCSGHSCVVTKLSVT*QMAMVILINGLVNF
Trigger: AAAATTTACCAACCCATTTATCAGGATGACCATTGCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR TCA 90 bp AAAAAGAAAGAAAACAATAAAGCCATTGTTCCCGTAATTACCCGCTaGGTGAAGATGGCATTGTCTGGTTCAGGAAAGTGTTCCTCGGTA +
Preference number: 1 (lower is better)
Translates to: KKKENNKAIVPVITR*VKMALSGSGKCSSV
Trigger: TACCGAGGAACACTTTCCTGAACCAGACAATGCCATCTTCACTCAGCGGGTAATTACGGGAACAATGGCTTTATTGTTTTCTTTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 90 bp ACTGTAATTTGTGATCTTGTCTGCTTTTTACCGAGAGATGTTAGGTaGAGGGTACTAAGGTACCCATCTCTTAGTATTAAAGAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: TVICDLVCFLPRDVR*RVLRYPSLSIKEEK
Trigger: TTTTTCTTCTTTAATACTAAGAGATGGGTACCTTAGTACCCTTCACCTAACATCTCTCGGTAAAAAGCAGACAAGATCACAAATTACAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR GCA 90 bp GGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGCGTGAATaGGTATCTTTATTGAAAGATCGAAATGTATTATATAATAGTTGG +
Preference number: 1 (lower is better)
Translates to: GAVFFTYTELHLQRE*VSLLKDRNVLYNSW
Trigger: CCAACTATTATATAATACATTTCGATCTTTCAATAAAGATACGCATTCACGCTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CCA 90 bp ACTCAGCTTATTAGAATTACATTAAAGGGTTCTGAATTCATGATATaGACTTTGATAATATCTACTAACCCAGGCAGAAACTCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: TQLIRITLKGSEFMI*TLIISTNPGRNSGR
Trigger: CCTTCCAGAGTTTCTGCCTGGGTTAGTAGATATTATCAAAGTCCATATCATGAATTCAGAACCCTTTAATGTAATTCTAATAAGCTGAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 90 bp AGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATaGCCAGAGAGACCAACGGTTGTGAGGGATCTCAGGGAGTTTAAG +
Preference number: 2 (lower is better)
Translates to: SQEARAHIRALHSHR*PERPTVVRDLREFK
Trigger: CTTAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR TCA 90 bp CCCACCGACCTTGGAAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCCACATGTCAAGTTGCTaGTTTTGTTCCATTGTAAGA +
Preference number: 2 (lower is better)
Translates to: PTDLGNCPARRPEHIFGRHMSSC*FCSIVR
Trigger: TCTTACAATGGAACAAAATCAGCAACTTGACATGTG...GCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR GCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGTTACCACTGTGTGGCTaGATAGGCATGTCGAGTTGT +
Preference number: 2 (lower is better)
Translates to: GASNSACLWGSRALCSMLLPLCG*IGMSSC
Trigger: ACAACTCGACATGCCTATGCAGCCACACAGTGGTAA...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR TCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCACTGGGCTGAGACTTTaGCAAACTAATCTGCCCACC +
Preference number: 2 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGTGLRL*QTNLPT
Trigger: GGTGGGCAGATTAGTTTGTCAAAGTCTCAGCCCAGT...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR TCA 90 bp AAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGACTTAGCCGTAGGAAATaGGCAAAATTAATCTTCGTC +
Preference number: 2 (lower is better)
Translates to: KLPSQEARAHIRALHSHRLSRRK*AKLIFV
Trigger: GACGAAGATTAATTTTGCTCATTTCCTACGGCTAAG...TCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR GCA 90 bp TCTGACATGTTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCCACATATTCGGGCGCTaGATTCCCACAGATTGCCAG +
Preference number: 2 (lower is better)
Translates to: SDMFDIWSRVWDRSCLWFHIFGR*IPTDCQ
Trigger: CTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTG...GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 90 bp TGCTGTCCTTCAGGGCTGATGGAATCTTGTGTGCTCAGGACACAGTaGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCAATGGT +
Preference number: 2 (lower is better)
Translates to: CCPSGLMESCVLRTQ*CCDQAVCHLTNGNG
Trigger: ACCATTGCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCACACAAGATTCCATCAGCCCTGAAGGACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 90 bp AAAGTGCCCCAGGTCCACTCCATCCCACATGTCAAGTTGCTGATTTaGTTCCATTGTAAGAAGAGCGTGTGCAGACTGCTTAGCCGTAGG +
Preference number: 2 (lower is better)
Translates to: KVPQVHSIPHVKLLI*FHCKKSVCRLLSRR
Trigger: CCTACGGCTAAGCAGTCTGCACACGCTCTTCTTACAATGGAACAAAATCAGCAACTTGACATGTGGGATGGAGTGGACCTGGGGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 90 bp TGCTGCCTTCAAGTTACCACTGTGTGGCTGCATAGGCATGTCGAGTaGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCACC +
Preference number: 2 (lower is better)
Translates to: CCLQVTTVWLHRHVE*FCHEIHLSGAVFFT
Trigger: GGTGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCCTATGCAGCCACACAGTGGTAACTTGAAGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CCA 90 bp ACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTAGTCTCCACTTAGTTTaGAAAATTAGGCTTAATGTC +
Preference number: 2 (lower is better)
Translates to: TAQPGGQSTYSGAAFPQISLHLV*KIRLNV
Trigger: GACATTAAGCCTAATTTTCCAAACTAAGTGGAGACT...AATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 90 bp AGGATCTACCCCTCTTCCCTTTTCAGCAGCAGGTCCTTTCCCTGTTaGGTGCAGATTGTGTATAATCATTGTTGGCTGCCTTGTAACTCC +
Preference number: 2 (lower is better)
Translates to: RIYPSSLFSSRSFPC*VQIVYNHCWLPCNS
Trigger: GGAGTTACAAGGCAGCCAACAATGATTATACACAATCTGCACCAAACAGGGAAAGGACCTGCTGCTGAAAAGGGAAGAGGGGTAGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 90 bp CATGGGTGGGTTCATATTCATTATACGGTCCTTGGTCTGACATGTTaGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: HGWVHIHYTVLGLTC*TYGVVFGIGAACGS
Trigger: AGAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGACCAAGGACCGTATAATGAATATGAACCCACCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR TCA 90 bp TCTGACATGTTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCAAATTCCAGCAGAGCTaGAATCCATGGACTGCATCT +
Preference number: 2 (lower is better)
Translates to: SDMFDIWSRVWDRSCLWFKFQQS*NPWTAS
Trigger: AGATGCAGTCCATGGATTTCAGCTCTGCTGGAATTT...GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR GCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGATTCATCTCAGTGGTaGTGTTTTCTTCACCTACAC +
Preference number: 2 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGDSSQW*CFLHLH
Trigger: GTGTAGGTGAAGAAAACAGCACCACTGAGATGAATC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR TCA 90 bp TCTGACATGTTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCTCAAGTCGATGGCTTTaGTTTCATTTCCAGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SDMFDIWSRVWDRSCLWFSSRWL*FHFQSG
Trigger: ACCTGACTGGAAATGAAATCAAAGCCATCGACTTGA...GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR TCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCACTACACTTACAGCGTaGATGCGTATCTTTATTGAA +
Preference number: 2 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGTTLTA*MRIFIE
Trigger: TTCAATAAAGATACGCATTCACGCTGTAAGTGTAGT...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR GCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCCCTTTCCCTGTTTGGTaGAGATTGTGTATAATCATT +
Preference number: 2 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGPFPVW*RLCIII
Trigger: AATGATTATACACAATCTGCACCAAACAGGGAAAGG...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR TCA 90 bp TTAATGATGATGAAGGGTCCTTCATGGGTGGGTTCATATTCATTATACGGTCCTAGAGACCAACGGTTGTaGGGGATCTCAGGGAGTTTA +
Preference number: 2 (lower is better)
Translates to: LMMMKGPSWVGSYSLYGPRDQRL*GISGSL
Trigger: TAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCT...AGGACCGTATAATGAATATGAACCCACCCATGAAGGACCCTTCATCATCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 90 bp CCTCAACCCATCTGCCCACCTCCCACCCAAAAAGAAAAATGGCTCTaGAAGGTGATTGAACACAATGTATTTGGACTGTACTTTGAGTTT +
Preference number: 2 (lower is better)
Translates to: PQPICPPPTQKEKWL*KVIEHNVFGLYFEF
Trigger: AAACTCAAAGTACAGTCCAAATACATTGTGTTCAATCACCTTCAAGAGCCATTTTTCTTTTTGGGTGGGAGGTGGGCAGATGGGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 90 bp CCAGAGAGACCAACGGTTGTGAGGGATCTCAGGGAGTTTAAGATCTaGGAATCAAGGCTGTTTAACTTGTTGTTATCCATGAGGAGTATT +
Preference number: 2 (lower is better)
Translates to: PERPTVVRDLREFKI*ESRLFNLLLSMRSI
Trigger: AATACTCCTCATGGATAACAACAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR GCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATCAAGATCCGCAGCGTTaGTGTGATGCTGTTCCGTTC +
Preference number: 2 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYQDPQR*CDAVPF
Trigger: GAACGGAACAGCATCACAGCAACGCTGCGGATCTTG...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR GCA 90 bp ATATTATACTTCACATTCTTTGTATGGCAGCTGCTGACACTTGCACTGTCCATATGTAAGAAGAGCGTGTaGAGACTGCTTAGCCGTAGG +
Preference number: 2 (lower is better)
Translates to: ILYFTFFVWQLLTLALSICKKSV*RLLSRR
Trigger: CCTACGGCTAAGCAGTCTGCACACGCTCTTCTTACA...TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTATAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CCA 90 bp ATATTATACTTCACATTCTTTGTATGGCAGCTGCTGACACTTGCACTGTCCATAAGAATATCCTCTCCTTaGGTGTGGTCAGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: ILYFTFFVWQLLTLALSIRISSP*VWSGLW
Trigger: CCACAGTCCTGACCACACCCAAGGAGAGGATATTCT...TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTATAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR TCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATTTAACTTGGCTCTTTaGGGTTTGAAGATCAGGAAA +
Preference number: 2 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSFNLAL*GLKIRK
Trigger: TTTCCTGATCTTCAAACCTCAAAGAGCCAAGTTAAA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR TCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATGACACAGTTGTGTTGTaGCCAAGCTGTCTGTCACCT +
Preference number: 2 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYDTVVL*PSCLSP
Trigger: AGGTGACAGACAGCTTGGTCACAACACAACTGTGTC...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR GCA 90 bp AGGCTGTTTAACTTGTTGTTATCCATGAGGAGTATTTTAAGATTGGGCATCGTTAGAGCGTGTGCAGACTaGTTAGCCGTAGGAAATGAG +
Preference number: 2 (lower is better)
Translates to: RLFNLLLSMRSILRLGIVRACAD*LAVGNE
Trigger: CTCATTTCCTACGGCTAAGCAGTCTGCACACGCTCT...AACGATGCCCAATCTTAAAATACTCCTCATGGATAACAACAAGTTAAACAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR GCA 90 bp TTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTTGATTTCATTCTAGCTTTTCTAAAGTaGCCCAGGTCCACTCCATCC +
Preference number: 2 (lower is better)
Translates to: FKIGHRFKHCQVDGFDFILAFLK*PRSTPS
Trigger: GGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAG...AATGAAATCAAAGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGTGTGCGCTTTTAAATTaGAGGGAGCATGTCAGGATT +
Preference number: 2 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQCALLN*REHVRI
Trigger: AATCCTGACATGCTCCCTCCAATTTAAAAGCGCACA...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR GCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTGGAAGTAGGGCGCTGTaGTCTATGCTGTTAAATCAG +
Preference number: 2 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIGSRAL*SMLLNQ
Trigger: CTGATTTAACAGCATAGAGCACAGCGCCCTACTTCC...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR GCA 90 bp ATATTATACTTCACATTCTTTGTATGGCAGCTGCTGACACTTGCACTGTCCATAATCCTGCAAATCCATTaGGAGCCAAACTTCGCAAAC +
Preference number: 2 (lower is better)
Translates to: ILYFTFFVWQLLTLALSIILQIH*EPNFAN
Trigger: GTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGAT...TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTATAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR GCA 90 bp ATTCATTATACGGTCCTTGGTCTGACATGTTTGACATATGGAGTCGTGTTTGGGAGTAACTGCTATGCCTaGAGTAGTTGGGATTTCTTT +
Preference number: 2 (lower is better)
Translates to: IHYTVLGLTCLTYGVVFGSNCYA*SSWDFF
Trigger: AAAGAAATCCCAACTACTGCAGGCATAGCAGTTACT...CCCAAACACGACTCCATATGTCAAACATGTCAGACCAAGGACCGTATAATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CCA 90 bp CTTCATGGGTGGGTTCATATTCATTATACGGTCCTTGGTCTGACATGTTTGACAGGGAGTTTAAGATCTTaGAATCAAGGCTGTTTAACT +
Preference number: 2 (lower is better)
Translates to: LHGWVHIHYTVLGLTCLTGSLRS*NQGCLT
Trigger: AGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCC...TGTCAAACATGTCAGACCAAGGACCGTATAATGAATATGAACCCACCCATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 90 bp AGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTaGTTGTTATCCATGAGGAGTATTTTAAGATTGGGCATCGTTTCA +
Preference number: 2 (lower is better)
Translates to: RDLREFKILESRLFN*LLSMRSILRLGIVS
Trigger: TGAAACGATGCCCAATCTTAAAATACTCCTCATGGATAACAACAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR GCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATCATGTCGAGTTGTTCTaGCATGAGATTCATCTCAGT +
Preference number: 2 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYHVELF*HEIHLS
Trigger: ACTGAGATGAATCTCATGGCAGAACAACTCGACATG...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGAGTCTCCACTTAGTTTaGAAAATTAGGCTTAATGTC +
Preference number: 2 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQSLHLV*KIRLNV
Trigger: GACATTAAGCCTAATTTTCCAAACTAAGTGGAGACT...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 90 bp TCAAGGCTGTTTAACTTGTTGTTATCCATGAGGAGTATTTTAAGATaGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTTGATTTCA +
Preference number: 2 (lower is better)
Translates to: SRLFNLLLSMRSILR*GIVSNTVKSMALIS
Trigger: TGAAATCAAAGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCATGGATAACAACAAGTTAAACAGCCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 90 bp GATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGTaGTTATCCATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: DLREFKILESRLFNL*LSMRSILRLGIVSN
Trigger: GTTTGAAACGATGCCCAATCTTAAAATACTCCTCATGGATAACAACAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGAGTCTCCACTTAGTTTaGAAAATTAGGCTTAATGTC +
Preference number: 2 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGESLHLV*KIRLNV
Trigger: GACATTAAGCCTAATTTTCCAAACTAAGTGGAGACT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
3UTR-3UTR CCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATTCTCAGAGTTGTGTGTaGATTTACAAGTTTATCAGC +
Preference number: 2 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYSQSCV*IYKFIS
Trigger: GCTGATAAACTTGTAAATCCACACACAACTCTGAGA...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 90 bp GTGTGTGCGCTTTTAAATTGGAGGGAGCATGTCAGGATTGTTAAATaGACTCAGTTTGTCTTGTTTATCTCCAAAATATCTTCTAAATCT +
Preference number: 2 (lower is better)
Translates to: VCALLNWREHVRIVK*TQFVLFISKISSKS
Trigger: AGATTTAGAAGATATTTTGGAGATAAACAAGACAAACTGAGTCAATTTAACAATCCTGACATGCTCCCTCCAATTTAAAAGCGCACACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR GCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATCACTTACAGCGTGAATaGGTATCTTTATTGAAAGAT +
Preference number: 2 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYHLQRE*VSLLKD
Trigger: ATCTTTCAATAAAGATACGCATTCACGCTGTAAGTG...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR GCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATATTTGTGATCTTGTCTaGTTTTTACCGAGAGATGTT +
Preference number: 2 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYICDLV*FLPRDV
Trigger: AACATCTCTCGGTAAAAAGCAGACAAGATCACAAAT...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR GCA 72 bp GGCATAGGATGGAGTGTTCCCACCGACCTTGGAAACTaGCCAGCCAGGAGGCCAGAGCACATATTCGGGCGC +
Preference number: 3 (lower is better)
Translates to: GIGWSVPTDLGN*PARRPEHIFGR
Trigger: GCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CCA 72 bp CCTCTCCTTGGGTGTGGTCAGGACTGTGGCATAGGATaGAGTGTTCCCACCGACCTTGGAAACTGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: PLLGCGQDCGIG*SVPTDLGNCPA
Trigger: GGCTGGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCACAGTCCTGACCACACCCAAGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp CCCACCGACCTTGGAAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCGTCAAGTCGATGGCTTaGATTTCATTTCCAGTCAGG +
Preference number: 3 (lower is better)
Translates to: PTDLGNCPARRPEHIFGRVKSMA*ISFPVR
Trigger: CCTGACTGGAAATGAAATCAAAGCCATCGACTTGAC...GCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CCA 72 bp GGACTGTGGCATAGGATGGAGTGTTCCCACCGACCTTaGAAACTGCCCAGCCAGGAGGCCAGAGCACATATT +
Preference number: 3 (lower is better)
Translates to: GLWHRMECSHRP*KLPSQEARAHI
Trigger: AATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCACAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CCA 72 bp CCCTCACCTCTGTGCTGCCTTCAAGTTACCACTGTGTaGCTGCATAGGCATGTCGAGTTGTTCTGCCATGAG +
Preference number: 3 (lower is better)
Translates to: PSPLCCLQVTTV*LHRHVELFCHE
Trigger: CTCATGGCAGAACAACTCGACATGCCTATGCAGCCACACAGTGGTAACTTGAAGGCAGCACAGAGGTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp CAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTGCCAGAAATCCTGCAAATCCATaGCGAGCCAAACTTCGCAAA +
Preference number: 3 (lower is better)
Translates to: QPGGQSTYSGAAFPQIARNPANP*RAKLRK
Trigger: TTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATT...TCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGCATAGGCATGTCGAGTaGTTCTGCCATGAGATTCAT +
Preference number: 3 (lower is better)
Translates to: GASNSACLWGSRALCSMLHRHVE*FCHEIH
Trigger: ATGAATCTCATGGCAGAACAACTCGACATGCCTATG...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGAGGTCCTTTCCCTGTTaGGTGCAGATTGTGTATAAT +
Preference number: 3 (lower is better)
Translates to: GASNSACLWGSRALCSMLRSFPC*VQIVYN
Trigger: ATTATACACAATCTGCACCAAACAGGGAAAGGACCT...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR GCA 72 bp CACCTCTGTGCTGCCTTCAAGTTACCACTGTGTGGCTaGATAGGCATGTCGAGTTGTTCTGCCATGAGATTC +
Preference number: 3 (lower is better)
Translates to: HLCAAFKLPLCG*IGMSSCSAMRF
Trigger: GAATCTCATGGCAGAACAACTCGACATGCCTATGCAGCCACACAGTGGTAACTTGAAGGCAGCACAGAGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR GCA 72 bp TCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTaGTCTATGCTGTTAAATCAGCTTCTGTCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: SNSACLWGSRAL*SMLLNQLLSLP
Trigger: GGGCAGAGACAGAAGCTGATTTAACAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CCA 72 bp TCTAGAATATCCTCTCCTTGGGTGTGGTCAGGACTGTaGCATAGGATGGAGTGTTCCCACCGACCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: SRISSPWVWSGL*HRMECSHRPWK
Trigger: TTTCCAAGGTCGGTGGGAACACTCCATCCTATGCCACAGTCCTGACCACACCCAAGGAGAGGATATTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 72 bp TGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCTaGACCATTGAGCACTGCCTAATTCTTCTTAAAGTG +
Preference number: 3 (lower is better)
Translates to: WSRVWDRSCLWF*TIEHCLILLKV
Trigger: CACTTTAAGAAGAATTAGGCAGTGCTCAATGGTTCAGAACCACAGGCAGCTCCGATCCCAAACACGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CCA 72 bp TCATTATACGGTCCTTGGTCTGACATGTTTGACATATaGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: SLYGPWSDMFDI*SRVWDRSCLWF
Trigger: GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGACCAAGGACCGTATAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp ATTCATTATACGGTCCTTGGTCTGACATGTTTGACATATGGAGTCGTGTTTGGGCTGCATTCCCACAGATaGCCAGAGAGACCAACGGTT +
Preference number: 3 (lower is better)
Translates to: IHYTVLGLTCLTYGVVFGLHSHR*PERPTV
Trigger: AACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCAG...CCCAAACACGACTCCATATGTCAAACATGTCAGACCAAGGACCGTATAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 72 bp GGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTaGCAAATGGCAATGGTCATCCTGATAAATGGGTTG +
Preference number: 3 (lower is better)
Translates to: GHSCVVTKLSVT*QMAMVILINGL
Trigger: CAACCCATTTATCAGGATGACCATTGCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR TCA 72 bp TGCATTCCCACAGATTGCCAGAGAGACCAACGGTTGTaGGGGATCTCAGGGAGTTTAAGATCTTGGAATCAA +
Preference number: 3 (lower is better)
Translates to: CIPTDCQRDQRL*GISGSLRSWNQ
Trigger: TTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp TTTCCAGTCAGGTCTAGCTTTTCTAAAGTGCCCCAGGTCCACTCCATCCCACATAACTTCGCAAACGATTaGTGCTCAAATCCAGAAACT +
Preference number: 3 (lower is better)
Translates to: FPVRSSFSKVPQVHSIPHNFAND*CSNPET
Trigger: AGTTTCTGGATTTGAGCACAAATCGTTTGCGAAGTT...ATGTGGGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAGACCTGACTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 72 bp AATGATGGAAAATACTCCTCTGCTGTCCTTCAGGGCTaGTGGAATCTTGTGTGCTCAGGACACAGTTGTGTT +
Preference number: 3 (lower is better)
Translates to: NDGKYSSAVLQG*WNLVCSGHSCV
Trigger: AACACAACTGTGTCCTGAGCACACAAGATTCCATCAGCCCTGAAGGACAGCAGAGGAGTATTTTCCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR TCA 72 bp AAGAAGAGCGTGTGCAGACTGCTTAGCCGTAGGAAATaGGCAAAATTAATCTTCGTCAGCTGGTTGTGCTCT +
Preference number: 3 (lower is better)
Translates to: KKSVCRLLSRRK*AKLIFVSWLCS
Trigger: AGAGCACAACCAGCTGACGAAGATTAATTTTGCTCATTTCCTACGGCTAAGCAGTCTGCACACGCTCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR GCA 72 bp TTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTaGAGTAGTTGGGATTTCTTTGTCTCCCACATGGTA +
Preference number: 3 (lower is better)
Translates to: FRKVFLGSNCYA*SSWDFFVSHMV
Trigger: TACCATGTGGGAGACAAAGAAATCCCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR GCA 72 bp ATTGTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTaGTATGCCTGCAGTAGTTGGGATTTCTTTGTCTCC +
Preference number: 3 (lower is better)
Translates to: IVWFRKVFLGSN*YACSSWDFFVS
Trigger: GGAGACAAAGAAATCCCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGAGGAGTATTTTAAGATaGGGCATCGTTTCAAACACT +
Preference number: 3 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWRSILR*GIVSNT
Trigger: AGTGTTTGAAACGATGCCCAATCTTAAAATACTCCT...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGAGGCTGTTTAACTTGTaGTTATCCATGAGGAGTATT +
Preference number: 3 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWRLFNL*LSMRSI
Trigger: AATACTCCTCATGGATAACAACAAGTTAAACAGCCT...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 72 bp ATCTCTATAAGTTGTAGCCATGACAGTGACAGTGGTTaGCAAATTCCAGCAGAGCTGAAATCCATGGACTGC +
Preference number: 3 (lower is better)
Translates to: ISISCSHDSDSG*QIPAELKSMDC
Trigger: GCAGTCCATGGATTTCAGCTCTGCTGGAATTTGTCAACCACTGTCACTGTCATGGCTACAACTTATAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATGTGCTCAGGACACAGTaGTGTTGTGACCAAGCTGTC +
Preference number: 3 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYVLRTQ*CCDQAV
Trigger: GACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR TCA 72 bp GAAAACAATAAAGCCATTGTTCCCGTAATTACCCGCTaGGTGAAGATGGCATTGTCTGGTTCAGGAAAGTGT +
Preference number: 3 (lower is better)
Translates to: ENNKAIVPVITR*VKMALSGSGKC
Trigger: ACACTTTCCTGAACCAGACAATGCCATCTTCACTCAGCGGGTAATTACGGGAACAATGGCTTTATTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTAGGGCTGATGGAATCTaGTGTGCTCAGGACACAGTT +
Preference number: 3 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIRADGI*CAQDTV
Trigger: AACTGTGTCCTGAGCACACAAGATTCCATCAGCCCT...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTGTGTGCGCTTTTAAATaGGAGGGAGCATGTCAGGAT +
Preference number: 3 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIVCAFK*EGACQD
Trigger: ATCCTGACATGCTCCCTCCAATTTAAAAGCGCACAC...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp CTTCATGGGTGGGTTCATATTCATTATACGGTCCTTGGTCTGACATGTTTGACACTCCCACATGGTAACTaGATGAGCTTATTCTTTTTG +
Preference number: 3 (lower is better)
Translates to: LHGWVHIHYTVLGLTCLTLPHGN*MSLFFL
Trigger: CAAAAAGAATAAGCTCATCAAGTTACCATGTGGGAG...TGTCAAACATGTCAGACCAAGGACCGTATAATGAATATGAACCCACCCATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTTCGAGATCAACTGAATaGAACTGGGCTGAGACTTTG +
Preference number: 3 (lower is better)
Translates to: ICFCPYTKDFASYGPLRISRSTE*NWAETL
Trigger: CAAAGTCTCAGCCCAGTTCAATTCAGTTGATCTCGA...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATTTCCGTTCTAGCCAGTaGGTAAAGAAAGCACAGATG +
Preference number: 3 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYFRSSQ*VKKAQM
Trigger: CATCTGTGCTTTCTTTACCAACTGGCTAGAACGGAA...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATCCTGTTTGGTGCAGATaGTGTATAATCATTGTTGGC +
Preference number: 3 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYPVWCR*CIIIVG
Trigger: GCCAACAATGATTATACACAATCTGCACCAAACAGG...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp ATATTATACTTCACATTCTTTGTATGGCAGCTGCTGACACTTGCACTGTCCATAAGGGAGTTTAAGATCTaGGAATCAAGGCTGTTTAAC +
Preference number: 3 (lower is better)
Translates to: ILYFTFFVWQLLTLALSIREFKI*ESRLFN
Trigger: GTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCT...TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTATAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR TCA 72 bp TGTGATCTTGTCTGCTTTTTACCGAGAGATGTTAGGTaGAGGGTACTAAGGTACCCATCTCTTAGTATTAAA +
Preference number: 3 (lower is better)
Translates to: CDLVCFLPRDVR*RVLRYPSLSIK
Trigger: TTTAATACTAAGAGATGGGTACCTTAGTACCCTTCACCTAACATCTCTCGGTAAAAAGCAGACAAGATCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CCA 72 bp TATCATTTGTTAACTATGGCATGTTTATATTTACATTaGAGGATCTACCCCTCTTCCCTTTTCAGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: YHLLTMACLYLH*RIYPSSLFSSR
Trigger: CCTGCTGCTGAAAAGGGAAGAGGGGTAGATCCTCCAATGTAAATATAAACATGCCATAGTTAACAAATGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTGTGATCAAACAGGTATaGATCTATATCTGTTTCTGC +
Preference number: 3 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIVIKQV*IYICFC
Trigger: GCAGAAACAGATATAGATCAATACCTGTTTGATCAC...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR TCA 72 bp ACAAGTTTATCAGCCCACTCTTTTCAGAAAGGTGATTaGAATCCCTGTCATGCTACAGAAATGAATATAAAC +
Preference number: 3 (lower is better)
Translates to: TSLSAHSFQKGD*NPCHATEMNIN
Trigger: GTTTATATTCATTTCTGTAGCATGACAGGGATTTCAATCACCTTTCTGAAAAGAGTGGGCTGATAAACTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp CCCACCGACCTTGGAAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCGAGCACATTGGAGGCTaGATTCAGTCGCGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: PTDLGNCPARRPEHIFGREHIGG*IQSRLL
Trigger: TAACAACCGCGACTGAATGCAGCCTCCAATGTGCTC...GCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp CAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTGCCAGACCAGAACAGGCGTACTaGGATAGTCCGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QPGGQSTYSGAAFPQIARPEQAY*DSPQGV
Trigger: AACTCCCTGCGGACTATCCCAGTACGCCTGTTCTGG...TCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGCAGCGGCATTTGGGTaGACACGCCATACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGAAAFG*TRHTQG
Trigger: GCCCTGGGTATGGCGTGTCCACCCAAATGCCGCTGC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp GCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATaGCCAGAGAGACCAACGGTTGTGAGGGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: ARAHIRALHSHR*PERPTVVRDLR
Trigger: CCTGAGATCCCTCACAACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp CAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTGCCAGAAGAGACCAACGGTTGTaGGGGATCTCAGGGAGTTTA +
Preference number: 4 (lower is better)
Translates to: QPGGQSTYSGAAFPQIARRDQRL*GISGSL
Trigger: TAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCT...TCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp AAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGAGACAGTGACAGTGGTTaGCAAATTCCAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLPSQEARAHIRALHSHRDSDSG*QIPAEL
Trigger: CAGCTCTGCTGGAATTTGTCAACCACTGTCACTGTC...TCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR GCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCACCGACCTTGGAAACTaGCCAGCCAGGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGTDLGN*PARRPE
Trigger: CTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGT...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGGCTCCTGGAGCAGCATaGGTGCATTTACTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLAPGAA*VHLLKS
Trigger: GCTTTTCAGTAAATGCACTCATGCTGCTCCAGGAGC...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGGACAGTGACAGTGGTTaGCAAATTCCAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLDSDSG*QIPAEL
Trigger: CAGCTCTGCTGGAATTTGTCAACCACTGTCACTGTC...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGACTCATTGCATATATTaGTGCCAGCATAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLTHCIY*CQHRGP
Trigger: GGGGCCCCTATGCTGGCAGCAATATATGCAATGAGT...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGAGAGCGTGTGCAGACTaGTTAGCCGTAGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLRACAD*LAVGNE
Trigger: CTCATTTCCTACGGCTAAGCAGTCTGCACACGCTCT...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp AAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGACTTGTTGATGGCAGATaGGTGGCTTGTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KLPSQEARAHIRALHSHRLVDGR*VACCRE
Trigger: TTCTCTGCAACAAGCCACCCATCTGCCATCAACAAG...TCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCTGTTCCCACCGACCTTaGAAACTGCCCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGCSHRP*KLPSQE
Trigger: CTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACA...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGCTGAAGCTGGCAAATTaGTCTCTTTCGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLLKLAN*SLSSSV
Trigger: CACAGAGCTCGAAAGAGATCAATTTGCCAGCTTCAG...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGGAGTTGGAACGTAAATaGAAGGTCTGCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLELERK*KVCSFR
Trigger: TCGGAAGCTGCAGACCTTGCATTTACGTTCCAACTC...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTATCCTGCAAATCCATTaGGAGCCAAACTTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: TAQPGGQSTYSGAAFPQIILQIH*EPNFAN
Trigger: GTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGAT...AATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGTTTGATCATGATAGTTaGGAGAGAGAGCGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLFDHDS*ERERES
Trigger: ACTCTCGCGCTCTCTCTCTCAACTATCATGATCAAA...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGGCTATGCTGTTCCTCTaGATTAGTAAATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLAMLFL*ISKWLA
Trigger: AGCCAGCCATTTACTAATTCAGAGGAACAGCATAGC...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGTAAGCCCATTCTTCTaGGCACATTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGVSPFF*AHWRLH
Trigger: ATGCAGCCTCCAATGTGCTCAGAAGAATGGGCTTAC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCCTAGCTTTTCTAAAGTaGCCCAGGTCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGLAFLK*PRSTPS
Trigger: GGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAG...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCTTGATGGCAGATGGGTaGCTTGTTGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGLMADG*LVAEKS
Trigger: GCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAA...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCCAAGTTACCACTGTGTaGCTGCATAGGCATGTCGAG +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGQVTTV*LHRHVE
Trigger: CTCGACATGCCTATGCAGCCACACAGTGGTAACTTG...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTCCAGTCAGGTCTAGCTTTTCTAAAGTGCCCCAGGTCCACTCCATCCCACATGCTCCTGGAGCAGCATaGGTGCATTTACTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: FPVRSSFSKVPQVHSIPHAPGAA*VHLLKS
Trigger: GCTTTTCAGTAAATGCACTCATGCTGCTCCAGGAGC...ATGTGGGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAGACCTGACTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCTTGGTCTTAACTTGTTaGTGGCAGATGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGLVLTC*WQMGGL
Trigger: CAAGCCACCCATCTGCCATCAACAAGTTAAGACCAA...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp AAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGACACATGTCAAGTTGCTaGTTTTGTTCCATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KLPSQEARAHIRALHSHRHMSSC*FCSIVR
Trigger: TCTTACAATGGAACAAAATCAGCAACTTGACATGTG...TCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGCTTATTCAAGTACTATaGGTTTGCCCCAGGTTAGAT +
Preference number: 4 (lower is better)
Translates to: GASNSACLWGSRALCSMLLIQVL*VCPRLD
Trigger: ATCTAACCTGGGGCAAACTCATAGTACTTGAATAAG...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGTGTAAGAAGAGCGTGTaGAGACTGCTTAGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWCKKSV*RLLSRR
Trigger: CCTACGGCTAAGCAGTCTGCACACGCTCTTCTTACA...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR GCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGGAAGTAGGGCGCTGTaGTCTATGCTGTTAAATCAG +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGGSRAL*SMLLNQ
Trigger: CTGATTTAACAGCATAGAGCACAGCGCCCTACTTCC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTCTTAGGATATCCCTCTaGAAAGCATTGGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: TAQPGGQSTYSGAAFPQILRISL*KALVSF
Trigger: AAATGAAACCAATGCTTTCCAGAGGGATATCCTAAG...AATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGTGGTTCTGAACCATTaGGCACTGCCTAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGVVLNH*ALPNSS
Trigger: AGAAGAATTAGGCAGTGCTCAATGGTTCAGAACCAC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp CCAGAGAGACCAACGGTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGAATATCCTCTCCTTaGGTGTGGTCAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PERPTVVRDLREFKILESRISSP*VWSGLW
Trigger: CCACAGTCCTGACCACACCCAAGGAGAGGATATTCT...TGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 72 bp CAAGTTACCACTGTGTGGCTGCATAGGCATGTCGAGTaGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QVTTVWLHRHVE*FCHEIHLSGAV
Trigger: AACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCCTATGCAGCCACACAGTGGTAACTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp CCCTCTTCCCTTTTCAGCAGCAGGTCCTTTCCCTGTTaGGTGCAGATTGTGTATAATCATTGTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PSSLFSSRSFPC*VQIVYNHCWLP
Trigger: AGGCAGCCAACAATGATTATACACAATCTGCACCAAACAGGGAAAGGACCTGCTGCTGAAAAGGGAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp TCAGGGCTGATGGAATCTTGTGTGCTCAGGACACAGTaGTGTTGTGACCAAGCTGTCTGTCACCTGACAAAT +
Preference number: 4 (lower is better)
Translates to: SGLMESCVLRTQ*CCDQAVCHLTN
Trigger: ATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCACACAAGATTCCATCAGCCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp AAAGTGCCCCAGGTCCACTCCATCCCACATGTCAAGTaGCTGATTTTGTTCCATTGTAAGAAGAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: KVPQVHSIPHVK*LILFHCKKSVC
Trigger: GCACACGCTCTTCTTACAATGGAACAAAATCAGCAACTTGACATGTGGGATGGAGTGGACCTGGGGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATATGTGGCGTTTGGCACTaGGTGGAAGCCCTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPICGVWH*VEALRV
Trigger: GACTCTCAGGGCTTCCACTCAGTGCCAAACGCCACA...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCTGGCTCTTTGAGGTTTaGAGATCAGGAAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGWLFEV*RSGKSR
Trigger: TCTGCTTTTTCCTGATCTTCAAACCTCAAAGAGCCA...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCACCGAGAGATGTTAGGTaGAGGGTACTAAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSPRDVR*RVLRYP
Trigger: TGGGTACCTTAGTACCCTTCACCTAACATCTCTCGG...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCCATGTCGAGTTGTTCTaGCATGAGATTCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGHVELF*HEIHLS
Trigger: ACTGAGATGAATCTCATGGCAGAACAACTCGACATG...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGGAGAGCCCTTGTCTGTaGCGTTTGGCACTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQESPCL*RLALSG
Trigger: TCCACTCAGTGCCAAACGCCACAGACAAGGGCTCTC...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp TTTCCAGTCAGGTCTAGCTTTTCTAAAGTGCCCCAGGTCCACTCCATCCCACATGAAACGGCACAAGAATaGATTTGCTTATGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: FPVRSSFSKVPQVHSIPHETAQE*ICLCAA
Trigger: CGCAGCACATAAGCAAATCCATTCTTGTGCCGTTTC...ATGTGGGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAGACCTGACTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCACCCCTAATGGCCACTTaGAATGTAAGCCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSPLMAT*NVSPFF
Trigger: GAAGAATGGGCTTACATTTCAAGTGGCCATTAGGGG...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTCGAGCTCTGTGATGTaGTTGTGCCTCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMESSSVM*LCLRDR
Trigger: CCTGTCCCTGAGGCACAATCACATCACAGAGCTCGA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTCCAGTCAGGTCTAGCTTTTCTAAAGTGCCCCAGGTCCACTCCATCCCACATTCAAGTCGATGGCTTTaGTTTCATTTCCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FPVRSSFSKVPQVHSIPHSSRWL*FHFQSG
Trigger: ACCTGACTGGAAATGAAATCAAAGCCATCGACTTGA...ATGTGGGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAGACCTGACTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGAGCTGCCTGTGGTTCTaGACCATTGAGCACTGCCTA +
Preference number: 4 (lower is better)
Translates to: VVRDLREFKILESRLFNLSCLWF*TIEHCL
Trigger: TAGGCAGTGCTCAATGGTTCAGAACCACAGGCAGCT...CAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR GCA 90 bp GTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGCACATATTCGGGCGCTaGATTCCCACAGATTGCCAG +
Preference number: 4 (lower is better)
Translates to: VVRDLREFKILESRLFNLHIFGR*IPTDCQ
Trigger: CTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTG...CAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR GCA 90 bp AGGCTGTTTAACTTGTTGTTATCCATGAGGAGTATTTTAAGATTGGGCATCGTTACCGACCTTGGAAACTaGCCAGCCAGGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RLFNLLLSMRSILRLGIVTDLGN*PARRPE
Trigger: CTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGT...AACGATGCCCAATCTTAAAATACTCCTCATGGATAACAACAAGTTAAACAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR GCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCAGTAACTGCTATGCCTaGAGTAGTTGGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGSNCYA*SSWDFF
Trigger: AAAGAAATCCCAACTACTGCAGGCATAGCAGTTACT...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATGGAAAATACTCCTCTaGTGTCCTTCAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSWKILL*CPSGLM
Trigger: CATCAGCCCTGAAGGACAGCAGAGGAGTATTTTCCA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGCAAGATCCGCAGCGTTaGTGTGATGCTGTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQQDPQR*CDAVPF
Trigger: GAACGGAACAGCATCACAGCAACGCTGCGGATCTTG...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGCCAGAACAGGCGTACTaGGATAGTCCGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEPEQAY*DSPQGV
Trigger: AACTCCCTGCGGACTATCCCAGTACGCCTGTTCTGG...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGGTGTGGTCAGGACTGTaGCATAGGATGGAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQVWSGL*HRMECS
Trigger: GGAACACTCCATCCTATGCCACAGTCCTGACCACAC...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGGTGTGGTCAGGACTGTaGCATAGGATGGAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VVRDLREFKILESRLFNLVWSGL*HRMECS
Trigger: GGAACACTCCATCCTATGCCACAGTCCTGACCACAC...CAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp TCTGACATGTTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCAGGGTCCTTCATGGGTaGGTTCATATTCATTATACG +
Preference number: 4 (lower is better)
Translates to: SDMFDIWSRVWDRSCLWFRVLHG*VHIHYT
Trigger: CGTATAATGAATATGAACCCACCCATGAAGGACCCT...GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCATGAAGGGTCCTTCATaGGTGGGTTCATATTCATTA +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGMKGPS*VGSYSL
Trigger: TAATGAATATGAACCCACCCATGAAGGACCCTTCAT...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAAATTCAGCCTGTCTGTaGGGAAGTAGGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPINSACL*GSRALC
Trigger: GCACAGCGCCCTACTTCCCCACAGACAGGCTGAATT...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp CGCAGCGTTGCTGTGATGCTGTTCCGTTCTAGCCAGTaGGTAAAGAAAGCACAGATGACTAACAGTCTAATC +
Preference number: 4 (lower is better)
Translates to: RSVAVMLFRSSQ*VKKAQMTNSLI
Trigger: GATTAGACTGTTAGTCATCTGTGCTTTCTTTACCAACTGGCTAGAACGGAACAGCATCACAGCAACGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp CAGGTCCACTCCATCCCACATGTCAAGTTGCTGATTTaGTTCCATTGTAAGAAGAGCGTGTGCAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: QVHSIPHVKLLI*FHCKKSVCRLL
Trigger: AAGCAGTCTGCACACGCTCTTCTTACAATGGAACAAAATCAGCAACTTGACATGTGGGATGGAGTGGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGAGAGACCAACGGTTGTaGGGGATCTCAGGGAGTTTA +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQRDQRL*GISGSL
Trigger: TAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCT...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGCCCGTAATTACCCGCTaGGTGAAGATGGCATTGTCT +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQPVITR*VKMALS
Trigger: AGACAATGCCATCTTCACTCAGCGGGTAATTACGGG...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGAGCTGCCTGTGGTTCTaGACCATTGAGCACTGCCTA +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGESCLWF*TIEHCL
Trigger: TAGGCAGTGCTCAATGGTTCAGAACCACAGGCAGCT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR TCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATTCCGCAGCGTTGCTGTaGTGCTGTTCCGTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYSAALL*CCSVLA
Trigger: GGCTAGAACGGAACAGCATCACAGCAACGCTGCGGA...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGCACATATTCGGGCGCTaGATTCCCACAGATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEHIFGR*IPTDCQ
Trigger: CTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTG...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATTCAACTGGAAAGTATaGCTCGCTAGCCTTGGCTAT +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSFNWKV*LASLGY
Trigger: ATAGCCAAGGCTAGCGAGGCATACTTTCCAGTTGAA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTTCTCGCAGCGGCATTTaGGTGGACACGCCATACCCA +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRISRSGI*VDTPYP
Trigger: TGGGTATGGCGTGTCCACCCAAATGCCGCTGCGAGA...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp TTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTTGATTTCATTTGTTCCCACCGACCTTaGAAACTGCCCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FKIGHRFKHCQVDGFDFICSHRP*KLPSQE
Trigger: CTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACA...AATGAAATCAAAGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAGACTGTGGCATAGGATaGAGTGTTCCCACCGACCTT +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIDCGIG*SVPTDL
Trigger: AAGGTCGGTGGGAACACTCCATCCTATGCCACAGTC...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp TTAATGATGATGAAGGGTCCTTCATGGGTGGGTTCATATTCATTATACGGTCCTGACTGTGGCATAGGATaGAGTGTTCCCACCGACCTT +
Preference number: 4 (lower is better)
Translates to: LMMMKGPSWVGSYSLYGPDCGIG*SVPTDL
Trigger: AAGGTCGGTGGGAACACTCCATCCTATGCCACAGTC...AGGACCGTATAATGAATATGAACCCACCCATGAAGGACCCTTCATCATCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAATATGGAGTCGTGTTTaGGATCGGAGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIIWSRV*DRSCLW
Trigger: CCACAGGCAGCTCCGATCCCAAACACGACTCCATAT...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp TTAATCCTGCAAATCCATTGCGAGCCAAACTTCGCAAACGATTTGTGCTCAAATATATGGAGTCGTGTTTaGGATCGGAGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LILQIHCEPNFANDLCSNIWSRV*DRSCLW
Trigger: CCACAGGCAGCTCCGATCCCAAACACGACTCCATAT...ATTTGAGCACAAATCGTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGATATGGAGTCGTGTTTaGGATCGGAGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEIWSRV*DRSCLW
Trigger: CCACAGGCAGCTCCGATCCCAAACACGACTCCATAT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp TCTGACATGTTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCATGAAGGGTCCTTCATaGGTGGGTTCATATTCATTA +
Preference number: 4 (lower is better)
Translates to: SDMFDIWSRVWDRSCLWFMKGPS*VGSYSL
Trigger: TAATGAATATGAACCCACCCATGAAGGACCCTTCAT...GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 72 bp GTTCATATTCATTATACGGTCCTTGGTCTGACATGTTaGACATATGGAGTCGTGTTTGGGATCGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VHIHYTVLGLTC*TYGVVFGIGAA
Trigger: GGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGACCAAGGACCGTATAATGAATATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATACGAGTTGTTCTGCCATaGGATTCATCTCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIRVVLP*DSSQWC
Trigger: GCACCACTGAGATGAATCTCATGGCAGAACAACTCG...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGACTGGGCTGAGACTTTaGCAAACTAATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGETGLRL*QTNLPT
Trigger: GGTGGGCAGATTAGTTTGTCAAAGTCTCAGCCCAGT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGAAGCTGTCTGTCACCTaGCAAATGGCAATGGTCATC +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQKLSVT*QMAMVI
Trigger: GATGACCATTGCCATTTGTCAGGTGACAGACAGCTT...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGGACACAGTTGTGTTGTaGCCAAGCTGTCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEDTVVL*PSCLSP
Trigger: AGGTGACAGACAGCTTGGTCACAACACAACTGTGTC...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAGAGCACATTGGAGGCTaGATTCAGTCGCGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIEHIGG*IQSRLL
Trigger: TAACAACCGCGACTGAATGCAGCCTCCAATGTGCTC...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR GCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGGAGCACATTGGAGGCTaGATTCAGTCGCGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEEHIGG*IQSRLL
Trigger: TAACAACCGCGACTGAATGCAGCCTCCAATGTGCTC...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR GCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTGTAAGAAGAGCGTGTaGAGACTGCTTAGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMECKKSV*RLLSRR
Trigger: CCTACGGCTAAGCAGTCTGCACACGCTCTTCTTACA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTCTAGCTTTTCTAAAGTaGCCCAGGTCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: MRSILRLGIVSNTVKSMALAFLK*PRSTPS
Trigger: GGATGGAGTGGACCTGGGGCACTTTAGAAAAGCTAG...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR GCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATATGCATTCCCACAGATTaGCAGAGAGACCAACGGTTG +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPICIPTD*QRDQRL
Trigger: CAACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCA...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTGCATTCCCACAGATTaGCAGAGAGACCAACGGTTG +
Preference number: 4 (lower is better)
Translates to: MRSILRLGIVSNTVKSMACIPTD*QRDQRL
Trigger: CAACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCA...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTTGATGGCAGATGGGTaGCTTGTTGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MRSILRLGIVSNTVKSMALMADG*LVAEKS
Trigger: GCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAA...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATATTGATGGCAGATGGGTaGCTTGTTGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPILMADG*LVAEKS
Trigger: GCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAA...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp TCTGACATGTTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCGGGAGTTTAAGATCTTaGAATCAAGGCTGTTTAACT +
Preference number: 4 (lower is better)
Translates to: SDMFDIWSRVWDRSCLWFGSLRS*NQGCLT
Trigger: AGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCC...GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGAGAATATCCTCTCCTTaGGTGTGGTCAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGERISSP*VWSGLW
Trigger: CCACAGTCCTGACCACACCCAAGGAGAGGATATTCT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGTCATTATACGGTCCTTaGTCTGACATGTTTGACATA +
Preference number: 4 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWSLYGP*SDMFDI
Trigger: TATGTCAAACATGTCAGACCAAGGACCGTATAATGA...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATGTGCGCTTTTAAATTaGAGGGAGCATGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSCALLN*REHVRI
Trigger: AATCCTGACATGCTCCCTCCAATTTAAAAGCGCACA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCTTCTTGGTTTCTAGATaGGTATGGTATCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGFLVSR*VWYHSL
Trigger: AAGACTATGATACCATACCCATCTAGAAACCAAGAA...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCACATGAGTGCATTTACTaGAAAGCTTTTCCGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSHECIY*KAFPRN
Trigger: GTTTCTCGGAAAAGCTTTTCAGTAAATGCACTCATG...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGCTCTGGGTGCAGAGATaGCAGCTGATTAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGELWVQR*QLIKRQ
Trigger: CTGTCTTTTAATCAGCTGTCATCTCTGCACCCAGAG...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCACTTAGCCGTAGGAAATaGGCAAAATTAATCTTCGTC +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSLSRRK*AKLIFV
Trigger: GACGAAGATTAATTTTGCTCATTTCCTACGGCTAAG...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGAAATTCCAGCAGAGCTaGAATCCATGGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQKFQQS*NPWTAS
Trigger: AGATGCAGTCCATGGATTTCAGCTCTGCTGGAATTT...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGAAATTCCAGCAGAGCTaGAATCCATGGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: VVRDLREFKILESRLFNLKFQQS*NPWTAS
Trigger: AGATGCAGTCCATGGATTTCAGCTCTGCTGGAATTT...CAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp ATATTATACTTCACATTCTTTGTATGGCAGCTGCTGACACTTGCACTGTCCATACCCGTAATTACCCGCTaGGTGAAGATGGCATTGTCT +
Preference number: 4 (lower is better)
Translates to: ILYFTFFVWQLLTLALSIPVITR*VKMALS
Trigger: AGACAATGCCATCTTCACTCAGCGGGTAATTACGGG...TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTATAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTAGCTGCCTGTGGTTCTaGACCATTGAGCACTGCCTA +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRISCLWF*TIEHCL
Trigger: TAGGCAGTGCTCAATGGTTCAGAACCACAGGCAGCT...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATGGAAAAGTTCTGTGTaGATGAGTAGCTTGCATCTA +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSWKSSV*MSSLHL
Trigger: TAGATGCAAGCTACTCATTCACACAGAACTTTTCCA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTGCTGTCCTTCAGGGCTaGTGGAATCTTGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIAVLQG*WNLVCS
Trigger: TGAGCACACAAGATTCCATCAGCCCTGAAGGACAGC...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTTCCTCGGTAGTAACTaGTATGCCTGCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEFLGSN*YACSSW
Trigger: CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTTCCTCGGTAGTAACTaGTATGCCTGCAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: MRSILRLGIVSNTVKSMAFLGSN*YACSSW
Trigger: CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAA...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR GCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAATCCCTCACCTCTGTaGTGCCTTCAAGTTACCACT +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMENPSPL*CLQVTT
Trigger: AGTGGTAACTTGAAGGCAGCACAGAGGTGAGGGATT...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGCTTGTTGATGGCAGATaGGTGGCTTGTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMELVDGR*VACCRE
Trigger: TTCTCTGCAACAAGCCACCCATCTGCCATCAACAAG...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp GTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGTATGCCTGCAGTAGTTaGGATTTCTTTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVRDLREFKILESRLFNLYACSS*DFFVSH
Trigger: GTGGGAGACAAAGAAATCCCAACTACTGCAGGCATA...CAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATCAACTGAATTGAACTaGGCTGAGACTTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSSTELN*AETLTN
Trigger: GTTTGTCAAAGTCTCAGCCCAGTTCAATTCAGTTGA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp CCAACGGTTGTGAGGGATCTCAGGGAGTTTAAGATCTaGGAATCAAGGCTGTTTAACTTGTTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: PTVVRDLREFKI*ESRLFNLLLSM
Trigger: CATGGATAACAACAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAACCGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp TTAATCCTGCAAATCCATTGCGAGCCAAACTTCGCAAACGATTTGTGCTCAAATGTGGTTCTGAACCATTaGGCACTGCCTAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LILQIHCEPNFANDLCSNVVLNH*ALPNSS
Trigger: AGAAGAATTAGGCAGTGCTCAATGGTTCAGAACCAC...ATTTGAGCACAAATCGTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAGTGGTTCTGAACCATTaGGCACTGCCTAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIVVLNH*ALPNSS
Trigger: AGAAGAATTAGGCAGTGCTCAATGGTTCAGAACCAC...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR GCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGGATTCATCTCAGTGGTaGTGTTTTCTTCACCTACAC +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQDSSQW*CFLHLH
Trigger: GTGTAGGTGAAGAAAACAGCACCACTGAGATGAATC...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAAACTTGCCTGTACACTaGTCTTTATGTTACCCTCCC +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPINLPVH*SLCYPP
Trigger: GGGAGGGTAACATAAAGAGCAGTGTACAGGCAAGTT...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTGCACAAGAATGGATTTaGTTATGTGCTGCGACCACA +
Preference number: 4 (lower is better)
Translates to: MRSILRLGIVSNTVKSMAAQEWI*LCAATT
Trigger: TGTGGTCGCAGCACATAAGCAAATCCATTCTTGTGC...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGGAAGATGGCATTGTCTaGTTCAGGAAAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEEDGIV*FRKVFL
Trigger: GAGGAACACTTTCCTGAACCAGACAATGCCATCTTC...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTGAAGATGGCATTGTCTaGTTCAGGAAAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: MRSILRLGIVSNTVKSMAEDGIV*FRKVFL
Trigger: GAGGAACACTTTCCTGAACCAGACAATGCCATCTTC...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGGACATGTTTGACATATaGAGTCGTGTTTGGGATCGG +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEDMFDI*SRVWDR
Trigger: CCGATCCCAAACACGACTCCATATGTCAAACATGTC...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGTTCACATTCTTTGTATaGCAGCTGCTGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQFTFFV*QLLTLA
Trigger: TGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAA...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGTTCACATTCTTTGTATaGCAGCTGCTGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: VVRDLREFKILESRLFNLFTFFV*QLLTLA
Trigger: TGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAA...CAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTTGTGGTACATGGGATaGAGAGCAGTGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMELWYMG*RAVIKQ
Trigger: CTGTTTGATCACTGCTCTCCATCCCATGTACCACAA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATGTTTATATTTACATTaGAGGATCTACCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSCLYLH*RIYPSS
Trigger: GGAAGAGGGGTAGATCCTCCAATGTAAATATAAACA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATCTCAGAGTTGTGTGTaGATTTACAAGTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSSQSCV*IYKFIS
Trigger: GCTGATAAACTTGTAAATCCACACACAACTCTGAGA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp TGGTACATGGGATGGAGAGCAGTGATCAAACAGGTATaGATCTATATCTGTTTCTGCCCAATAGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WYMGWRAVIKQV*IYICFCPIASF
Trigger: GAAAGAAGCTATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCCCATGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR TCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTGCAGAGATGACAGCTaGTTAAAAGACAGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMECRDDS*LKDRSK
Trigger: TTTGGACCTGTCTTTTAATCAGCTGTCATCTCTGCA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp AGTTTAATTAATCCTGCAAATCCATTGCGAGCCAAACTTCGCAAACGATTTGTGGACATGTTTGACATATaGAGTCGTGTTTGGGATCGG +
Preference number: 4 (lower is better)
Translates to: SLINPANPLRAKLRKRFVDMFDI*SRVWDR
Trigger: CCGATCCCAAACACGACTCCATATGTCAAACATGTC...CACAAATCGTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATTAATTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGAGGGTCCTTCATGGGTaGGTTCATATTCATTATACG +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGERVLHG*VHIHYT
Trigger: CGTATAATGAATATGAACCCACCCATGAAGGACCCT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGGGTCCTTCATGGGTaGGTTCATATTCATTATACG +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMERVLHG*VHIHYT
Trigger: CGTATAATGAATATGAACCCACCCATGAAGGACCCT...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTTCACATTCTTTGTATaGCAGCTGCTGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEFTFFV*QLLTLA
Trigger: TGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGTTCTACTTCCCACCCTaGCAAGAAATTGAAGATTTG +
Preference number: 4 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQFYFPP*QEIEDL
Trigger: CAAATCTTCAATTTCTTGCCAGGGTGGGAAGTAGAA...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGGTGTATAATCATTGTTaGCTGCCTTGTAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEVYNHC*LPCNSS
Trigger: GCTGGAGTTACAAGGCAGCCAACAATGATTATACAC...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTAATCCTGCAAATCCATTGCGAGCCAAACTTCGCAAACGATTTGTGCTCAAATCATGAGTGCATTTACTaGAAAGCTTTTCCGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LILQIHCEPNFANDLCSNHECIY*KAFPRN
Trigger: GTTTCTCGGAAAAGCTTTTCAGTAAATGCACTCATG...ATTTGAGCACAAATCGTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGGTTTGTGGTTTGAAATaGTGGAAAATACTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEVCGLK*WKILLC
Trigger: GCAGAGGAGTATTTTCCATCATTTCAAACCACAAAC...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTATCCTGCAAATCCATTaGGAGCCAAACTTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIILQIH*EPNFAN
Trigger: GTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGAT...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATACTGGCTTTTCCAATTTaGTTTTGTCCGTACACTAAG +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPILAFPI*FCPYTK
Trigger: CTTAGTGTACGGACAAAAGCAAATTGGAAAAGCCAG...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATACCTCCCAAAACACCCTaGATAATAGTATTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIPPKTP*IIVFSS
Trigger: GGAAGAAAATACTATTATGCAGGGTGTTTTGGGAGG...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTGCAGGTTAATCAGTTaGGTAAAAGTTGTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMECRLIS*VKVVFG
Trigger: GCCAAACACAACTTTTACCCAACTGATTAACCTGCA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTTATGCCTGCAGTAGTTaGGATTTCTTTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIYACSS*DFFVSH
Trigger: GTGGGAGACAAAGAAATCCCAACTACTGCAGGCATA...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATGACATGTTTGACATATaGAGTCGTGTTTGGGATCGG +
Preference number: 4 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYDMFDI*SRVWDR
Trigger: CCGATCCCAAACACGACTCCATATGTCAAACATGTC...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGATGAAGGGTCCTTCATaGGTGGGTTCATATTCATTA +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEMKGPS*VGSYSL
Trigger: TAATGAATATGAACCCACCCATGAAGGACCCTTCAT...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGTTCTACTTCCCACCCTaGCAAGAAATTGAAGATTTG +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEFYFPP*QEIEDL
Trigger: CAAATCTTCAATTTCTTGCCAGGGTGGGAAGTAGAA...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR TCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATTCAAGTCGATGGCTTTaGTTTCATTTCCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYSSRWL*FHFQSG
Trigger: ACCTGACTGGAAATGAAATCAAAGCCATCGACTTGA...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGTTTAACTTGGCTCTTTaGGGTTTGAAGATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEFNLAL*GLKIRK
Trigger: TTTCCTGATCTTCAAACCTCAAAGAGCCAAGTTAAA...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATCTCTTTTCAGAAAGGTaGTTGAAATCCCTGTCATGC +
Preference number: 4 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYLFSER*LKSLSC
Trigger: GCATGACAGGGATTTCAATCACCTTTCTGAAAAGAG...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ATATTATACTTCACATTCTTTGTATGGCAGCTGCTGACACTTGCACTGTCCATAAGTAACTGCTATGCCTaGAGTAGTTGGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: ILYFTFFVWQLLTLALSISNCYA*SSWDFF
Trigger: AAAGAAATCCCAACTACTGCAGGCATAGCAGTTACT...TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTATAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATACTTAGGATATCCCTCTaGAAAGCATTGGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPILRISL*KALVSF
Trigger: AAATGAAACCAATGCTTTCCAGAGGGATATCCTAAG...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGCTTAGGATATCCCTCTaGAAAGCATTGGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMELRISL*KALVSF
Trigger: AAATGAAACCAATGCTTTCCAGAGGGATATCCTAAG...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGGGGAGTTTAAGATCTTaGAATCAAGGCTGTTTAACT +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEGSLRS*NQGCLT
Trigger: AGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCC...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGTCATTATACGGTCCTTaGTCTGACATGTTTGACATA +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGESLYGP*SDMFDI
Trigger: TATGTCAAACATGTCAGACCAAGGACCGTATAATGA...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTCATTATACGGTCCTTaGTCTGACATGTTTGACATA +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMESLYGP*SDMFDI
Trigger: TATGTCAAACATGTCAGACCAAGGACCGTATAATGA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR TCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTTTTCAGAAAGGTGATTaGAATCCCTGTCATGCTACA +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIFQKGD*NPCHAT
Trigger: TGTAGCATGACAGGGATTTCAATCACCTTTCTGAAA...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR TCA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATATTTGGACTGTACTTTaGGTTTCCAGTCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYIWTVL*VSSLSV
Trigger: AACACTGAGACTGGAAACTCAAAGTACAGTCCAAAT...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGCACTTACAGCGTGAATaGGTATCTTTATTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEHLQRE*VSLLKD
Trigger: ATCTTTCAATAAAGATACGCATTCACGCTGTAAGTG...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR GCA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGATTTGTGATCTTGTCTaGTTTTTACCGAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEICDLV*FLPRDV
Trigger: AACATCTCTCGGTAAAAAGCAGACAAGATCACAAAT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATATTAATTATCTATAGATaGCCTTACTGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GWRAVIKQVLIYICFCPILIIYR*PYCLSL
Trigger: GAGAGAGAGACAGTAAGGCCATCTATAGATAATTAA...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp TTTAACTTGTTGTTATCCATGAGGAGTATTTTAAGATaGGGCATCGTTTCAAACACTGTCAAGTCGATGGCT +
Preference number: 4 (lower is better)
Translates to: FNLLLSMRSILR*GIVSNTVKSMA
Trigger: AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCATGGATAACAACAAGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR TCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTCACATGTCAAGTTGCTaGTTTTGTTCCATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIHMSSC*FCSIVR
Trigger: TCTTACAATGGAACAAAATCAGCAACTTGACATGTG...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ATATTATACTTCACATTCTTTGTATGGCAGCTGCTGACACTTGCACTGTCCATAAGTCTCCACTTAGTTTaGAAAATTAGGCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: ILYFTFFVWQLLTLALSISLHLV*KIRLNV
Trigger: GACATTAAGCCTAATTTTCCAAACTAAGTGGAGACT...TATGGACAGTGCAAGTGTCAGCAGCTGCCATACAAAGAATGTGAAGTATAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTAGTCTCCACTTAGTTTaGAAAATTAGGCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRISLHLV*KIRLNV
Trigger: GACATTAAGCCTAATTTTCCAAACTAAGTGGAGACT...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CCA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTTTTCAAACTAGTTCTTaGTTTCTAGATGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIFQTSS*FLDGYG
Trigger: ACCATACCCATCTAGAAACCAAGAACTAGTTTGAAA...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274711.7
3UTR CAA 72 bp GAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGTaGTTATCCATGAGGAGTATTTTAAGATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: EFKILESRLFNL*LSMRSILRLGI
Trigger: GATGCCCAATCTTAAAATACTCCTCATGGATAACAACAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
3UTR CAA 72 bp ATTACATTAAAGGGTTCTGAATTCATGATATGGACTTaGATAATATCTACTAACCCAGGCAGAAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ITLKGSEFMIWT*IISTNPGRNSG
Trigger: TCCAGAGTTTCTGCCTGGGTTAGTAGATATTATCAAAGTCCATATCATGAATTCAGAACCCTTTAATGTAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS TCA 90 bp CCTCAGGGACAGGCCCAGAGAGCCCTTGTCTGTGGCGTTTGGCACTaGGTGGAAGCCCTGAGAGTCGCAGTAGAAGAGCAGCTTCTCGCA +
Preference number: 5 (lower is better)
Translates to: PQGQAQRALVCGVWH*VEALRVAVEEQLLA
Trigger: TGCGAGAAGCTGCTCTTCTACTGCGACTCTCAGGGCTTCCACTCAGTGCCAAACGCCACAGACAAGGGCTCTCTGGGCCTGTCCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp CAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTGCCAGAGTGTTCCCACCGACCTaGGAAACTGCCCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: QPGGQSTYSGAAFPQIARVFPPT*ETAQPG
Trigger: TCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACAC...TCTGGCAATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp ACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTATTCTTCTGAGCACATaGGAGGCTGCATTCAGTCGC +
Preference number: 5 (lower is better)
Translates to: TAQPGGQSTYSGAAFPQIILLST*EAAFSR
Trigger: GCGACTGAATGCAGCCTCCAATGTGCTCAGAAGAAT...AATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCAGGCCCAGAGAGCCCTaGTCTGTGGCGTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGRPREP*SVAFGT
Trigger: AGTGCCAAACGCCACAGACAAGGGCTCTCTGGGCCT...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGTGTTCCCACCGACCTaGGAAACTGCCCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGVFPPT*ETAQPG
Trigger: TCCTGGCTGGGCAGTTTCCAAGGTCGGTGGGAACAC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCTGCATTCCCACAGATTGTCAAGTCGATGGCTTaGATTTCATTTCCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: TAQPGGQSTYSGAAFPQIVKSMA*ISFPVR
Trigger: CCTGACTGGAAATGAAATCAAAGCCATCGACTTGAC...AATCTGTGGGAATGCAGCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp CCCACCGACCTTGGAAACTGCCCAGCCAGGAGGCCAGAGCACATATTCGGGCGCAGGAGTATTTTAAGATaGGGCATCGTTTCAAACACT +
Preference number: 5 (lower is better)
Translates to: PTDLGNCPARRPEHIFGRRSILR*GIVSNT
Trigger: AGTGTTTGAAACGATGCCCAATCTTAAAATACTCCT...GCGCCCGAATATGTGCTCTGGCCTCCTGGCTGGGCAGTTTCCAAGGTCGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATTCTCGCAGCGGCATTaGGGTGGACACGCCATACCC +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSFSQRH*GGHAIP
Trigger: GGGTATGGCGTGTCCACCCAAATGCCGCTGCGAGAA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGCATATGGAGTCGTGTTaGGGATCGGAGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWHMESC*GSELPV
Trigger: CACAGGCAGCTCCGATCCCAAACACGACTCCATATG...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGTTCCGTTCTAGCCAGTaGGTAAAGAAAGCACAGATG +
Preference number: 5 (lower is better)
Translates to: GASNSACLWGSRALCSMLFRSSQ*VKKAQM
Trigger: CATCTGTGCTTTCTTTACCAACTGGCTAGAACGGAA...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS TCA 90 bp TCAGTCTCCTTTCCGCAGCCGTTAGTTCTCTTGGTCTTAACTTGTTaGTGGCAGATGGGTGGCTTGTTGCAGAGAAGAGCTCCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SVSFPQPLVLLVLTC*WQMGGLLQRRAPGA
Trigger: TGCTCCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTTAAGACCAAGAGAACTAACGGCTGCGGAAAGGAGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000521094.2
ENST00000523537.1
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTTGTCTGTGGCGTTaGGCACTGAGTGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSPCLWR*ALSGSP
Trigger: AGGGCTTCCACTCAGTGCCAAACGCCACAGACAAGG...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCATAGTCCGCAGGGAGTaGGAACGTAAATGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGIVRRE*ERKCKV
Trigger: GACCTTGCATTTACGTTCCAACTCCCTGCGGACTAT...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGCCTGTTTGGTGCAGATaGTGTATAATCATTGTTGGC +
Preference number: 5 (lower is better)
Translates to: GASNSACLWGSRALCSMLPVWCR*CIIIVG
Trigger: GCCAACAATGATTATACACAATCTGCACCAAACAGG...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS CCA 90 bp GCAGCCGTTAGTTCTCTTGGTCTTAACTTGTTGATGGCAGATGGGTaGCTTGTTGCAGAGAAGAGCTCCTGGAGCAGCATGAGTGCATTT +
Preference number: 5 (lower is better)
Translates to: AAVSSLGLNLLMADG*LVAEKSSWSSMSAF
Trigger: AAATGCACTCATGCTGCTCCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTTAAGACCAAGAGAACTAACGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000521094.2
ENST00000523537.1
CDS-3UTR CAA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGCCCCTAATGGCCACTaGAAATGTAAGCCCATTCTT +
Preference number: 5 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGAPNGH*KCKPIL
Trigger: AAGAATGGGCTTACATTTCAAGTGGCCATTAGGGGC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp CCAGAGAGACCAACGGTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCACTGCATTCCCACAGATaGCCAGAGAGACCAACGGTT +
Preference number: 5 (lower is better)
Translates to: PERPTVVRDLREFKILESLHSHR*PERPTV
Trigger: AACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCAG...TGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAACCGTTGGTCTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGGGCACAAGAATGGATTaGCTTATGTGCTGCGACCAC +
Preference number: 5 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWGTRMD*LMCCDH
Trigger: GTGGTCGCAGCACATAAGCAAATCCATTCTTGTGCC...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp TCTGACATGTTTGACATATGGAGTCGTGTTTGGGATCGGAGCTGCCTGTGGTTCTCTCTTGGTCTTAACTaGTTGATGGCAGATGGGTGG +
Preference number: 5 (lower is better)
Translates to: SDMFDIWSRVWDRSCLWFSLGLN*LMADGW
Trigger: CCACCCATCTGCCATCAACAAGTTAAGACCAAGAGA...GAACCACAGGCAGCTCCGATCCCAAACACGACTCCATATGTCAAACATGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GGGGCTTCTAATTCAGCCTGTCTGTGGGGAAGTAGGGCGCTGTGCTCTATGCTGAGGCTGTTTAACTTGTaGTTATCCATGAGGAGTATT +
Preference number: 5 (lower is better)
Translates to: GASNSACLWGSRALCSMLRLFNL*LSMRSI
Trigger: AATACTCCTCATGGATAACAACAAGTTAAACAGCCT...CAGCATAGAGCACAGCGCCCTACTTCCCCACAGACAGGCTGAATTAGAAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS CCA 90 bp AACTTGTTGATGGCAGATGGGTGGCTTGTTGCAGAGAAGAGCTCCTaGAGCAGCATGAGTGCATTTACTGAAAAGCTTTTCCGAGAAACG +
Preference number: 5 (lower is better)
Translates to: NLLMADGWLVAEKSS*SSMSAFTEKLFRET
Trigger: CGTTTCTCGGAAAAGCTTTTCAGTAAATGCACTCATGCTGCTCCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000523537.1
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCAAGGGCTGATGGAATCTaGTGTGCTCAGGACACAGTT +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSRADGI*CAQDTV
Trigger: AACTGTGTCCTGAGCACACAAGATTCCATCAGCCCT...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATACAGATGGGTGGCTTGTaGCAGAGAAGAGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIQMGGL*QRRAPG
Trigger: TCCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTG...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATCTCTTGGTCTTAACTaGTTGATGGCAGATGGGTGG +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSSLGLN*LMADGW
Trigger: CCACCCATCTGCCATCAACAAGTTAAGACCAAGAGA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCTTGCAGGTTAATCAGTaGGGTAAAAGTTGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGLQVNQ*GKSCVW
Trigger: CCAAACACAACTTTTACCCAACTGATTAACCTGCAA...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATACATATGGAGTCGTGTTaGGGATCGGAGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIHMESC*GSELPV
Trigger: CACAGGCAGCTCCGATCCCAAACACGACTCCATATG...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGCTTGGTCTGACATGTTaGACATATGGAGTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWLGLTC*TYGVVF
Trigger: AAACACGACTCCATATGTCAAACATGTCAGACCAAG...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS TCA 90 bp GCTTGTTGCAGAGAAGAGCTCCTGGAGCAGCATGAGTGCATTTACTaGAAAGCTTTTCCGAGAAACGGCACAAGAATGGATTTGCTTATG +
Preference number: 5 (lower is better)
Translates to: ACCREELLEQHECIY*KAFPRNGTRMDLLM
Trigger: CATAAGCAAATCCATTCTTGTGCCGTTTCTCGGAAAAGCTTTTCAGTAAATGCACTCATGCTGCTCCAGGAGCTCTTCTCTGCAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCAACTGAAGCTGGCAAATaGATCTCTTTCGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSTEAGK*ISFELC
Trigger: ACAGAGCTCGAAAGAGATCAATTTGCCAGCTTCAGT...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTCTGGTTCAGGAAAGTGTTCCTCGGTAGTAACTGCTATGCCTGCAGTAGTTGGATCCCACATGTCAAGTaGCTGATTTTGTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: VWFRKVFLGSNCYACSSWIPHVK*LILFHC
Trigger: ACAATGGAACAAAATCAGCAACTTGACATGTGGGAT...CCAACTACTGCAGGCATAGCAGTTACTACCGAGGAACACTTTCCTGAACCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGCTGCATTCCCACAGATaGCCAGAGAGACCAACGGTT +
Preference number: 5 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGELHSHR*PERPTV
Trigger: AACCGTTGGTCTCTCTGGCAATCTGTGGGAATGCAG...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCGTGATCAAACAGGTATaGATCTATATCTGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGVIKQV*IYICFC
Trigger: GCAGAAACAGATATAGATCAATACCTGTTTGATCAC...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTGCTCAGGACACAGTTGTGTTGTGACCAAGCTGTCTGTCACCTGACAAATGGCTTTGTCAAGGCATCTTaGATCATGATAGTTGAGAGA +
Preference number: 5 (lower is better)
Translates to: VLRTQLCCDQAVCHLTNGFVKAS*IMIVER
Trigger: TCTCTCAACTATCATGATCAAAGATGCCTTGACAAA...GCCATTTGTCAGGTGACAGACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp TTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTTGATTTCATTCAGATGGGTGGCTTGTaGCAGAGAAGAGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: FKIGHRFKHCQVDGFDFIQMGGL*QRRAPG
Trigger: TCCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTG...AATGAAATCAAAGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAATTCTTCTGAGCACATaGGAGGCTGCATTCAGTCGC +
Preference number: 5 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIILLST*EAAFSR
Trigger: GCGACTGAATGCAGCCTCCAATGTGCTCAGAAGAAT...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGATTCTTCTGAGCACATaGGAGGCTGCATTCAGTCGC +
Preference number: 5 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEILLST*EAAFSR
Trigger: GCGACTGAATGCAGCCTCCAATGTGCTCAGAAGAAT...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTATAGTCCGCAGGGAGTaGGAACGTAAATGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: MRSILRLGIVSNTVKSMAIVRRE*ERKCKV
Trigger: GACCTTGCATTTACGTTCCAACTCCCTGCGGACTAT...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTCATATGGAGTCGTGTTaGGGATCGGAGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIHMESC*GSELPV
Trigger: CACAGGCAGCTCCGATCCCAAACACGACTCCATATG...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATACTTGGTCTTAACTTGTaGATGGCAGATGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GWRAVIKQVLIYICFCPILGLNL*MADGWL
Trigger: AAGCCACCCATCTGCCATCAACAAGTTAAGACCAAG...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTCTTGGTCTTAACTTGTaGATGGCAGATGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: MRSILRLGIVSNTVKSMALGLNL*MADGWL
Trigger: AAGCCACCCATCTGCCATCAACAAGTTAAGACCAAG...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGCTTGGTCTTAACTTGTaGATGGCAGATGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGELGLNL*MADGWL
Trigger: AAGCCACCCATCTGCCATCAACAAGTTAAGACCAAG...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTCTCTTGGTCTTAACTaGTTGATGGCAGATGGGTGG +
Preference number: 5 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMESLGLN*LMADGW
Trigger: CCACCCATCTGCCATCAACAAGTTAAGACCAAGAGA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCAATCCCACATGTCAAGTaGCTGATTTTGTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSIPHVK*LILFHC
Trigger: ACAATGGAACAAAATCAGCAACTTGACATGTGGGAT...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTGTGCTCAGGACACAGTaGTGTTGTGACCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: ICFCPYTKDFASYGPLRIVLRTQ*CCDQAV
Trigger: GACAGCTTGGTCACAACACAACTGTGTCCTGAGCAC...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCATATTTGGACTGTACTTaGAGTTTCCAGTCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSYLDCT*SFQSQC
Trigger: ACACTGAGACTGGAAACTCAAAGTACAGTCCAAATA...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGAGACAGGTCCAAATTTaGCAGGTTAATCAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQRQVQI*QVNQLG
Trigger: ACCCAACTGATTAACCTGCAAAATTTGGACCTGTCT...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGAATCCTGCAAATCCATaGCGAGCCAAACTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGENPANP*RAKLRK
Trigger: TTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTAATCCTGCAAATCCATaGCGAGCCAAACTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: MRSILRLGIVSNTVKSMANPANP*RAKLRK
Trigger: TTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATT...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGCTTGGTCTGACATGTTaGACATATGGAGTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQLGLTC*TYGVVF
Trigger: AAACACGACTCCATATGTCAAACATGTCAGACCAAG...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGCATAGGCATGTCGAGTaGTTCTGCCATGAGATTCAT +
Preference number: 5 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMEHRHVE*FCHEIH
Trigger: ATGAATCTCATGGCAGAACAACTCGACATGCCTATG...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GGCATGTCGAGTTGTTCTGCCATGAGATTCATCTCAGTGGTGCTGTTTTCTTCAATGTTTATATTTACATaGGAGGATCTACCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GMSSCSAMRFISVVLFSSMFIFT*EDLPLF
Trigger: GAAGAGGGGTAGATCCTCCAATGTAAATATAAACAT...TGAAGAAAACAGCACCACTGAGATGAATCTCATGGCAGAACAACTCGACATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGTCGAGATCAACTGAATaGAACTGGGCTGAGACTTTG +
Preference number: 5 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMESRSTE*NWAETL
Trigger: CAAAGTCTCAGCCCAGTTCAATTCAGTTGATCTCGA...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ATTCATTATACGGTCCTTGGTCTGACATGTTTGACATATGGAGTCGTGTTTGGGAACTTCGCAAACGATTaGTGCTCAAATCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: IHYTVLGLTCLTYGVVFGNFAND*CSNPET
Trigger: AGTTTCTGGATTTGAGCACAAATCGTTTGCGAAGTT...CCCAAACACGACTCCATATGTCAAACATGTCAGACCAAGGACCGTATAATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GAGATTCATCTCAGTGGTGCTGTTTTCTTCACCTACACTGAACTACACTTACAGAGGGAGTTTAAGATCTaGGAATCAAGGCTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: EIHLSGAVFFTYTELHLQREFKI*ESRLFN
Trigger: GTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCT...CTGTAAGTGTAGTTCAGTGTAGGTGAAGAAAACAGCACCACTGAGATGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp GTTGTGAGGGATCTCAGGGAGTTTAAGATCTTGGAATCAAGGCTGTTTAACTTGAGGGAGTTTAAGATCTaGGAATCAAGGCTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: VVRDLREFKILESRLFNLREFKI*ESRLFN
Trigger: GTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCT...CAAGTTAAACAGCCTTGATTCCAAGATCTTAAACTCCCTGAGATCCCTCACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGCTTGGTCTGACATGTTaGACATATGGAGTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGELGLTC*TYGVVF
Trigger: AAACACGACTCCATATGTCAAACATGTCAGACCAAG...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGAGGTCCTTTCCCTGTTaGGTGCAGATTGTGTATAAT +
Preference number: 5 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGERSFPC*VQIVYN
Trigger: ATTATACACAATCTGCACCAAACAGGGAAAGGACCT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAACTTCGCAAACGATTaGTGCTCAAATCCAGAAACT +
Preference number: 5 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMENFAND*CSNPET
Trigger: AGTTTCTGGATTTGAGCACAAATCGTTTGCGAAGTT...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATGTCAAGTCGATGGCTTaGATTTCATTTCCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYVKSMA*ISFPVR
Trigger: CCTGACTGGAAATGAAATCAAAGCCATCGACTTGAC...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp CTTCATGGGTGGGTTCATATTCATTATACGGTCCTTGGTCTGACATGTTTGACAAGGCTGTTTAACTTGTaGTTATCCATGAGGAGTATT +
Preference number: 5 (lower is better)
Translates to: LHGWVHIHYTVLGLTCLTRLFNL*LSMRSI
Trigger: AATACTCCTCATGGATAACAACAAGTTAAACAGCCT...TGTCAAACATGTCAGACCAAGGACCGTATAATGAATATGAACCCACCCATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATATCAAGGCTGTTTAACTaGTTGTTATCCATGAGGAGT +
Preference number: 5 (lower is better)
Translates to: GWRAVIKQVLIYICFCPISRLFN*LLSMRS
Trigger: ACTCCTCATGGATAACAACAAGTTAAACAGCCTTGA...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ATGAGGAGTATTTTAAGATTGGGCATCGTTTCAAACACTGTCAAGTCGATGGCTTCAAGGCTGTTTAACTaGTTGTTATCCATGAGGAGT +
Preference number: 5 (lower is better)
Translates to: MRSILRLGIVSNTVKSMASRLFN*LLSMRS
Trigger: ACTCCTCATGGATAACAACAAGTTAAACAGCCTTGA...AGCCATCGACTTGACAGTGTTTGAAACGATGCCCAATCTTAAAATACTCCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGATCCTGATAAATGGGTaGGTAAATTTTAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEILING*VNFSSW
Trigger: CCACGAGCTAAAATTTACCAACCCATTTATCAGGAT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ACTTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGGAGTATTTTAAGATaGGGCATCGTTTCAAACACT +
Preference number: 5 (lower is better)
Translates to: TLLSLLLSSKIVVVHGMERSILR*GIVSNT
Trigger: AGTGTTTGAAACGATGCCCAATCTTAAAATACTCCT...CTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp AGTTTAATTAATCCTGCAAATCCATTGCGAGCCAAACTTCGCAAACGATTTGTGCTCCCACATGGTAACTaGATGAGCTTATTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SLINPANPLRAKLRKRFVLPHGN*MSLFFL
Trigger: CAAAAAGAATAAGCTCATCAAGTTACCATGTGGGAG...CACAAATCGTTTGCGAAGTTTGGCTCGCAATGGATTTGCAGGATTAATTAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518785.1
CDS-3UTR CAA 90 bp GGATGGAGAGCAGTGATCAAACAGGTATTGATCTATATCTGTTTCTGCCCAATAGTGATCAAACAGGTATaGATCTATATCTGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GWRAVIKQVLIYICFCPIVIKQV*IYICFC
Trigger: GCAGAAACAGATATAGATCAATACCTGTTTGATCAC...TATTGGGCAGAAACAGATATAGATCAATACCTGTTTGATCACTGCTCTCCATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000521094.2
CDS-3UTR CAA 90 bp TTTACTAAGTCTCCTTTTAAGCAGCAAGATAGTTGTGGTACATGGGATGGAGAGATGAAGGATATCATGTaGATGTTGATGTTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: FTKSPFKQQDSCGTWDGEMKDIM*MLMLGK
Trigger: TTTCCCCAACATCAACATCAACATGATATCCTTCAT...CTCTCCATCCCATGTACCACAACTATCTTGCTGCTTAAAAGGAGACTTAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATTTTCCAGTCTCAGTGTaGATAGGAAGGTTCACCAAA +
Preference number: 5 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYFPVSV*IGRFTK
Trigger: TTTGGTGAACCTTCCTATCAACACTGAGACTGGAAA...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTCTCCCACATGGTAACTaGATGAGCTTATTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: ICFCPYTKDFASYGPLRILPHGN*MSLFFL
Trigger: CAAAAAGAATAAGCTCATCAAGTTACCATGTGGGAG...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp TTTGAGTTTCCAGTCTCAGTGTTGATAGGAAGGTTCACCAAACATTCCATATATTGGGTATTCTCAGAGTaGTGTGTGGATTTACAAGTT +
Preference number: 5 (lower is better)
Translates to: FEFPVSVLIGRFTKHSIYWVFSE*CVDLQV
Trigger: AACTTGTAAATCCACACACAACTCTGAGAATACCCA...ATATATGGAATGTTTGGTGAACCTTCCTATCAACACTGAGACTGGAAACTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS-3UTR CAA 90 bp ATTTGCTTTTGTCCGTACACTAAGGATTTTGCCAGTTATGGTCCTTTAAGGATTTTAAAACCATACTCATaGCATATATTGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: ICFCPYTKDFASYGPLRILKPYS*HILLPA
Trigger: TGCTGGCAGCAATATATGCAATGAGTATGGTTTTAA...AATCCTTAAAGGACCATAACTGGCAAAATCCTTAGTGTACGGACAAAAGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS CCA 72 bp TGTGCCTCAGGGACAGGCCCAGAGAGCCCTTGTCTGTaGCGTTTGGCACTGAGTGGAAGCCCTGAGAGTCGC +
Preference number: 6 (lower is better)
Translates to: CASGTGPESPCL*RLALSGSPESR
Trigger: GCGACTCTCAGGGCTTCCACTCAGTGCCAAACGCCACAGACAAGGGCTCTCTGGGCCTGTCCCTGAGGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS CAA 90 bp GATTGTGCCTCAGGGACAGGCCCAGAGAGCCCTTGTCTGTGGCGTTaGGCACTGAGTGGAAGCCCTGAGAGTCGCAGTAGAAGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: DCASGTGPESPCLWR*ALSGSPESRSRRAA
Trigger: AGCTGCTCTTCTACTGCGACTCTCAGGGCTTCCACTCAGTGCCAAACGCCACAGACAAGGGCTCTCTGGGCCTGTCCCTGAGGCACAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS CAA 72 bp TCCCAGAACAGGCGTACTGGGATAGTCCGCAGGGAGTaGGAACGTAAATGCAAGGTCTGCAGCTTCCGAAGG +
Preference number: 6 (lower is better)
Translates to: SQNRRTGIVRRE*ERKCKVCSFRR
Trigger: CCTTCGGAAGCTGCAGACCTTGCATTTACGTTCCAACTCCCTGCGGACTATCCCAGTACGCCTGTTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000518785.1
CDS CAA 90 bp TTCAGTCTCCTTTCCGCAGCCGTTAGTTCTCTTGGTCTTAACTTGTaGATGGCAGATGGGTGGCTTGTTGCAGAGAAGAGCTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: FSLLSAAVSSLGLNL*MADGWLVAEKSSWS
Trigger: GCTCCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTTAAGACCAAGAGAACTAACGGCTGCGGAAAGGAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000521094.2
ENST00000523537.1
CDS CAA 90 bp AGCTTCAGTCTCCTTTCCGCAGCCGTTAGTTCTCTTGGTCTTAACTaGTTGATGGCAGATGGGTGGCTTGTTGCAGAGAAGAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SFSLLSAAVSSLGLN*LMADGWLVAEKSSW
Trigger: CCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTTAAGACCAAGAGAACTAACGGCTGCGGAAAGGAGACTGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000521094.2
ENST00000523537.1
CDS CAA 72 bp CTTTCCGCAGCCGTTAGTTCTCTTGGTCTTAACTTGTaGATGGCAGATGGGTGGCTTGTTGCAGAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LSAAVSSLGLNL*MADGWLVAEKS
Trigger: GCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTTAAGACCAAGAGAACTAACGGCTGCGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000521094.2
ENST00000523537.1
CDS CAA 72 bp CTCCTTTCCGCAGCCGTTAGTTCTCTTGGTCTTAACTaGTTGATGGCAGATGGGTGGCTTGTTGCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: LLSAAVSSLGLN*LMADGWLVAEK
Trigger: CTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTTAAGACCAAGAGAACTAACGGCTGCGGAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000521094.2
ENST00000523537.1
CDS TCA 72 bp TTTCCGCAGCCGTTAGTTCTCTTGGTCTTAACTTGTTaGTGGCAGATGGGTGGCTTGTTGCAGAGAAGAGCT +
Preference number: 6 (lower is better)
Translates to: FPQPLVLLVLTC*WQMGGLLQRRA
Trigger: AGCTCTTCTCTGCAACAAGCCACCCATCTGCCATCAACAAGTTAAGACCAAGAGAACTAACGGCTGCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000521094.2
ENST00000523537.1
CDS CCA 72 bp ATGGCAGATGGGTGGCTTGTTGCAGAGAAGAGCTCCTaGAGCAGCATGAGTGCATTTACTGAAAAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: MADGWLVAEKSS*SSMSAFTEKLF
Trigger: GAAAAGCTTTTCAGTAAATGCACTCATGCTGCTCCAGGAGCTCTTCTCTGCAACAAGCCACCCATCTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274711.7
ENST00000518785.1
ENST00000523537.1
CDS CAA 72 bp TATATTGCTGCCAGCATAGGGGCCCCTAATGGCCACTaGAAATGTAAGCCCATTCTTCTGAGCACATTGGAG +
Preference number: 6 (lower is better)
Translates to: YIAASIGAPNGH*KCKPILLSTLE
Trigger: CTCCAATGTGCTCAGAAGAATGGGCTTACATTTCAAGTGGCCATTAGGGGCCCCTATGCTGGCAGCAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274711.7
CDS TCA 72 bp AGAGAAGAGCTCCTGGAGCAGCATGAGTGCATTTACTaGAAAGCTTTTCCGAGAAACGGCACAAGAATGGAT +
Preference number: 6 (lower is better)
Translates to: REELLEQHECIY*KAFPRNGTRMD
Trigger: ATCCATTCTTGTGCCGTTTCTCGGAAAAGCTTTTCAGTAAATGCACTCATGCTGCTCCAGGAGCTCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518785.1
ENST00000523537.1
CDS CAA 72 bp CTGCAAATCCATTGCGAGCCAAACTTCGCAAACGATTaGTGCTCAAATCCAGAAACTCCAGACTACGACAGT +
Preference number: 6 (lower is better)
Translates to: LQIHCEPNFAND*CSNPETPDYDS
Trigger: ACTGTCGTAGTCTGGAGTTTCTGGATTTGAGCACAAATCGTTTGCGAAGTTTGGCTCGCAATGGATTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274711.7
ENST00000518785.1