RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC49 (Homo sapiens)

Ensembl gene IDs: ENSG00000137821

Ensembl transcript IDs: ENST00000260382.10, ENST00000436542.6, ENST00000443425.6, ENST00000544974.6, ENST00000558032.5, ENST00000558204.5, ENST00000558456.5, ENST00000558799.5, ENST00000558808.5, ENST00000559069.1, ENST00000559201.5, ENST00000559422.1, ENST00000559469.5, ENST00000559670.5, ENST00000559806.5, ENST00000560107.6, ENST00000560158.6, ENST00000560369.5, ENST00000560691.5, ENST00000560980.5, ENST00000561081.5

Found 751 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCTGAGTCTAGAGGCCCTGTTTCCTCTGGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCTT +
Preference number: 1 (lower is better)
Translates to: VLSLEALFPLGMQRG*FHQSDRGPEESQNL
Trigger: AAGATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACAGGGCCTCTAGACTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR GCA 90 bp TTCAGGAACAAGAGAGAGACCCTATTACCAGGCCTGAAGCAGGTCTaGATAGAGCCAGCAGTGGCTGGGATGGCTTGCTGCCATTTCATT +
Preference number: 1 (lower is better)
Translates to: FRNKRETLLPGLKQV*IEPAVAGMACCHFI
Trigger: AATGAAATGGCAGCAAGCCATCCCAGCCACTGCTGGCTCTATGCAGACCTGCTTCAGGCCTGGTAATAGGGTCTCTCTCTTGTTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CCA 90 bp CTCATTTGCATATTCTCTGCCCATAGTGATTCCCAGGACCTCCTGTaGTTCCCTGAGAATGCATTCCTAGAAGAATGGGGCATCCTCCAT +
Preference number: 1 (lower is better)
Translates to: LICIFSAHSDSQDLL*FPENAFLEEWGILH
Trigger: ATGGAGGATGCCCCATTCTTCTAGGAATGCATTCTCAGGGAACCACAGGAGGTCCTGGGAATCACTATGGGCAGAGAATATGCAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR GCA 90 bp TGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTG +
Preference number: 1 (lower is better)
Translates to: WAIAGHQSKQEPRMQ*HAISENCLVPKGCL
Trigger: CAAACAACCTTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR TCA 90 bp GCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAG +
Preference number: 1 (lower is better)
Translates to: APIKARTKDAVPRHL*KLFSSQRLFGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR CCA 90 bp AAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTTAAGGATGTaGGTCTTTCTCAGAACCGCAATAGCAGCTTACCTAGCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: KHAFWEKSNQEILRM*VFLRTAIAAYLASF
Trigger: GAAGGAAGCTAGGTAAGCTGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CCA 90 bp CAAGGAACTTCAGAACGCAAAATGAGTTTGGAGTGTAGAACTAGATaGGAGGATCGCCATTCGACGTTTGAGACCCGACAAAGTAAGGAT +
Preference number: 1 (lower is better)
Translates to: QGTSERKMSLECRTR*EDRHSTFETRQSKD
Trigger: ATCCTTACTTTGTCGGGTCTCAAACGTCGAATGGCGATCCTCCCATCTAGTTCTACACTCCAAACTCATTTTGCGTTCTGAAGTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR TCA 90 bp TTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTaGTGGCAACTCAATCTTTTCGGTAGTTCAAGCCAAAAACCTTGT +
Preference number: 1 (lower is better)
Translates to: FLPADVPFTDCSHLS*WQLNLFGSSSQKPC
Trigger: ACAAGGTTTTTGGCTTGAACTACCGAAAAGATTGAGTTGCCATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR TCA 90 bp AATTCTATGAAAGTGAAGGAGACTGTTGTGATCATTCCTGCTGTTTaGACACTCCAATTCCTATCCAGAGATTCCAGTGCTCCTGAGCCA +
Preference number: 1 (lower is better)
Translates to: NSMKVKETVVIIPAV*TLQFLSRDSSAPEP
Trigger: TGGCTCAGGAGCACTGGAATCTCTGGATAGGAATTGGAGTGTTCAAACAGCAGGAATGATCACAACAGTCTCCTTCACTTTCATAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR GCA 90 bp ACTGCATCCCTAACAAGCTCAATGAACATCTGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATGTTGATTTCTGTGGCTTCCTTCACA +
Preference number: 1 (lower is better)
Translates to: TASLTSSMNICGQSF*KASFFMLISVASFT
Trigger: TGTGAAGGAAGCCACAGAAATCAACATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAGGGATGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR TCA 90 bp TTGTACATGTTGAGATGCATTGTGTATTCCATAAGACGGAATTCCTaGTCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCAT +
Preference number: 1 (lower is better)
Translates to: LYMLRCIVYSIRRNS*SFLPADVPFTDCSH
Trigger: ATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATGGAATACACAATGCATCTCAACATGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR GCA 90 bp GTCAACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTTTCCTTGAATTTAAGGTGCAGAGAA +
Preference number: 1 (lower is better)
Translates to: VNWSIRRSWASALNC*SITRFVSLNLRCRE
Trigger: TTCTCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CCA 90 bp CTTACATCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTaGTTCTCCTCTCAACATCACCTTCAAGCTGGGATCTCATTTCTA +
Preference number: 1 (lower is better)
Translates to: LTSFQSARIPQTIYS*FSSQHHLQAGISFL
Trigger: TAGAAATGAGATCCCAGCTTGAAGGTGATGTTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGATGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR TCA 90 bp ATAACTGAAAATTATCAGCTAAAAGTAGGTAGATGCAGCTCATGCTaGATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCAC +
Preference number: 1 (lower is better)
Translates to: ITENYQLKVGRCSSC*IISKYYVLWAIAGH
Trigger: GTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAGCATGAGCTGCATCTACCTACTTTTAGCTGATAATTTTCAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR GCA 90 bp ATTGTCAACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTTGTTTCCTTGAATTTAAGGTGCAGA +
Preference number: 1 (lower is better)
Translates to: IVNWSIRRSWASALN*CSITRFVSLNLRCR
Trigger: TCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTTGACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CCA 90 bp GCGAATTTCTATGACTGCATCCCTAACAAGCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGCCTCATTTTTCATGTTGATTTCTGT +
Preference number: 1 (lower is better)
Translates to: ANFYDCIPNKLNEHL*PKLLQSLIFHVDFC
Trigger: ACAGAAATCAACATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR GCA 90 bp TCTTTTCTATCTTCATTTGTAGCAATATTGGCTACTCGTTGTTGTTaGAAGTCCCACTGTCGAGCTACGTTGTTAATTGTTAACCTTTTC +
Preference number: 1 (lower is better)
Translates to: SFLSSFVAILATRCC*KSHCRATLLIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTGGGACTTGCAACAACAACGAGTAGCCAATATTGCTACAAATGAAGATAGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR TCA 90 bp CTTAACACCTGCACTTGGATATTTAACAACCATCTCAACATATGCTaGGATGTGTGGTATATCTTGTATATATTGTACATGTTGAGATGC +
Preference number: 1 (lower is better)
Translates to: LNTCTWIFNNHLNIC*DVWYILYILYMLRC
Trigger: GCATCTCAACATGTACAATATATACAAGATATACCACACATCTCAGCATATGTTGAGATGGTTGTTAAATATCCAAGTGCAGGTGTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCTCCCAGGACCTCCTGTaGTTCCCTGAGAATGCATTC +
Preference number: 2 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLSQDLL*FPENAF
Trigger: GAATGCATTCTCAGGGAACCACAGGAGGTCCTGGGA...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 2 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLEPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp GAGATTCCAGTGCTCCTGAGCCATATAGGGAAAGTGTATCCCCGTCCACTTCAAGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 2 (lower is better)
Translates to: EIPVLLSHIGKVYPRPLQEPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...TTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR GCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAGGCCTGAAGCAGGTCTaGATAGAGCCAGCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRGLKQV*IEPAVA
Trigger: AGCCACTGCTGGCTCTATGCAGACCTGCTTCAGGCC...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp TTTCCTCTGGGAATGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGAGTGTGTTTGTACCATaGCTCTTGAGCTATGGGATT +
Preference number: 2 (lower is better)
Translates to: FPLGMQRGCFHQSDRGPESVFVP*LLSYGI
Trigger: AATCCCATAGCTCAAGAGTCATGGTACAAACACACT...CTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCCCAGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CCA 90 bp TTTCCTCTGGGAATGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGTTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: FPLGMQRGCFHQSDRGPEFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...CTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCCCAGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGCAGCAGTGGCTGGGATaGCTTGCTGCCATTTCATTG +
Preference number: 2 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMQQWLG*LAAISL
Trigger: CAATGAAATGGCAGCAAGCCATCCCAGCCACTGCTG...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGACAGCAGTGGCTGGGATaGCTTGCTGCCATTTCATTG +
Preference number: 2 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRQQWLG*LAAISL
Trigger: CAATGAAATGGCAGCAAGCCATCCCAGCCACTGCTG...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRVPRHL*KLFSSQ
Trigger: TTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCAC...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGCTAAGATTCCCAGGGTaGCTGGGCCAAGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWLRFPG*LGQESM
Trigger: CATGCTTTCTTGGCCCAGTCACCCTGGGAATCTTAG...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 2 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFREPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGTTGCACTGTCTTACATaGCAGGCCTTCAGTGGAATG +
Preference number: 2 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMLHCLT*QAFSGM
Trigger: CATTCCACTGAAGGCCTGGCATGTAAGACAGTGCAA...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAATCCCAGGACCTCCTGTaGTTCCCTGAGAATGCATTC +
Preference number: 2 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQSQDLL*FPENAF
Trigger: GAATGCATTCTCAGGGAACCACAGGAGGTCCTGGGA...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CAA 90 bp TCTGGGGATTATCTTCACCAAGGAACTTCAGAACGCAAAATGAGTTaGGAGTGTAGAACTAGATGGGAGGATCGCCATTCGACGTTTGAG +
Preference number: 2 (lower is better)
Translates to: SGDYLHQGTSERKMS*ECRTRWEDRHSTFE
Trigger: CTCAAACGTCGAATGGCGATCCTCCCATCTAGTTCTACACTCCAAACTCATTTTGCGTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LNHQQILRALGYSRAPIKVPRHL*KLFSSQ
Trigger: TTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCAC...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTATACACACTAGTAAGCTaGTGGCCTAAGTGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLYTLVS*WPKCQD
Trigger: ATCTTGGCACTTAGGCCATCAGCTTACTAGTGTGTA...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp GAGATTCCAGTGCTCCTGAGCCATATAGGGAAAGTGTATCCCCGTCCACTTCAACTCACGAAAGTGATTTaGTTGTGTCGCAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: EIPVLLSHIGKVYPRPLQLTKVI*LCRKLS
Trigger: ACTTAACTTGCGACACAATCAAATCACTTTCGTGAG...TTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR GCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAGTCTCTGCATGTCTCTaGATGTCTTTGCTGTCGTAC +
Preference number: 2 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRVSACL*MSLLSY
Trigger: GTACGACAGCAAAGACATGCAGAGACATGCAGAGAC...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGTCCCAGTGCATTCCTTaGCCAATCAGGAATAGATCA +
Preference number: 2 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMSQCIP*PIRNRS
Trigger: TGATCTATTCCTGATTGGGCAAGGAATGCACTGGGA...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 2 (lower is better)
Translates to: QEPRMQCHAISENCLVPKKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CCA 90 bp TGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTACAAGAAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 2 (lower is better)
Translates to: WSIRRSWASALNCCSITRKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...TCTTGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CAA 90 bp CAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: QCHAISENCLVPKGC*VLTYRQLILPFSCF
Trigger: AAAGCAGGAGAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAACATCCTCCATATAGGTaGATAGCAGGAACCGTACCT +
Preference number: 2 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQHPPYR*IAGTVP
Trigger: AGGTACGGTTCCTGCTATTCACCTATATGGAGGATG...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTCCTCCTGTGGTTCCCTaGGAATGCATTCCTAGAAGA +
Preference number: 2 (lower is better)
Translates to: FTHASLILLRHRYTCMSIPPVVP*ECIPRR
Trigger: TCTTCTAGGAATGCATTCTCAGGGAACCACAGGAGG...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGAGCAGAGACCAAAGCTaGGGAATAAAGAGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWSRDQS*GIKRLG
Trigger: ACCAAGCCTCTTTATTCCTCAGCTTTGGTCTCTGCT...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp AACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTACAGCCTTTCTTCTTCCGTaGTTCTCTTCATATCTAGCT +
Preference number: 2 (lower is better)
Translates to: NWSIRRSWASALNCCSITAFLLP*FSSYLA
Trigger: AGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGC...TGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR GCA 90 bp CATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTAAAAGAAGCAAGAACCAAGGATaGAGTGCCACGCCATCTCTG +
Preference number: 2 (lower is better)
Translates to: HASLILLRHRYTCMSIKRSKNQG*SATPSL
Trigger: CAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCT...TCTTTTAATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGATCTTACGAAGTGTGTaGTATCAGGAGGAAACTGAG +
Preference number: 2 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLILRSV*YQEETE
Trigger: CTCAGTTTCCTCCTGATAGCACACACTTCGTAAGAT...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGTTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 2 (lower is better)
Translates to: SKQEPRMQCHAISENCLVKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR CAA 90 bp ACTTCAACAAGGTATGTGTCTATGACAGATAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGAGGCCCTGTTTCCTCTGGGAATGCA +
Preference number: 2 (lower is better)
Translates to: TSTRYVSMTDKPCKA*LSPESRGPVSSGNA
Trigger: TGCATTCCCAGAGGAAACAGGGCCTCTAGACTCAGGACTCAACAATGCTTTACAAGGTTTATCTGTCATAGACACATACCTTGTTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENVPRHL*KLFSSQ
Trigger: TTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCAC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGCTAAGATTGTTTTTCTaGAGTGGCATCATCTCTAGC +
Preference number: 2 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMLRLFF*SGIISS
Trigger: GCTAGAGATGATGCCACTTCAGAAAAACAATCTTAG...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp TCCTGGCATCACCCAGAATGGAAATCAGACGATACTGGGGTAACTCAGAAGATGTCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 2 (lower is better)
Translates to: SWHHPEWKSDDTGVTQKMSSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...CATCTTCTGAGTTACCCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561081.5
3UTR-3UTR TCA 90 bp GAAGATGCTACATGTGCTAGGATTCCAAAGAGCCTTTCAGCCATTATCATATCACTTGTAAAGCATTGTTaGGTCCTGAGTCTAGAGGCC +
Preference number: 2 (lower is better)
Translates to: EDATCARIPKSLSAIIISLVKHC*VLSLEA
Trigger: GGCCTCTAGACTCAGGACTCAACAATGCTTTACAAG...TGATATGATAATGGCTGAAAGGCTCTTTGGAATCCTAGCACATGTAGCATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp AAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGATCACCTTGCCTACTTaGGTAGTTTCTTTCAAGGTC +
Preference number: 2 (lower is better)
Translates to: KVQQTKVVFPIDDRTYGQITLPT*VVSFKV
Trigger: GACCTTGAAAGAAACTACTCAAGTAGGCAAGGTGAT...CTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559201.5
3UTR-3UTR GCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTAGAACCCTTCACTCATaGATCCCTAATACTTCTGAG +
Preference number: 2 (lower is better)
Translates to: SKQEPRMQCHAISENCLVRTLHS*IPNTSE
Trigger: CTCAGAAGTATTAGGGATGCATGAGTGAAGGGTTCT...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTTTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: SKQEPRMQCHAISENCLVFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTAGAGCCAGCAGTGGCTaGGATGGCTTGCTGCCATTT +
Preference number: 2 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFRASSG*DGLLPF
Trigger: AAATGGCAGCAAGCCATCCCAGCCACTGCTGGCTCT...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTGAGTGTAGAACTAGATaGGAGGATCGCCATTCGACG +
Preference number: 2 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTECRTR*EDRHST
Trigger: CGTCGAATGGCGATCCTCCCATCTAGTTCTACACTC...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp CCTAACAAGCTCAATGAACATCTGTGGCCAAAGCTTCTGCAAAGCCTCATTTTTTCAATACGACGGAGTTaGGCTAGTGCGTTAAATTGC +
Preference number: 2 (lower is better)
Translates to: PNKLNEHLWPKLLQSLIFSIRRS*ASALNC
Trigger: GCAATTTAACGCACTAGCCCAACTCCGTCGTATTGA...AAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTGGCATCACCCAGAATaGAAATCAGACGATACTGGG +
Preference number: 2 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENWHHPE*KSDDTG
Trigger: CCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CAA 90 bp TCTTACATCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTaGGTTCTCCTCTCAACATCACCTTCAAGCTGGGATCTCATTTCT +
Preference number: 2 (lower is better)
Translates to: SYIFPICQNPTDNIL*VLLSTSPSSWDLIS
Trigger: AGAAATGAGATCCCAGCTTGAAGGTGATGTTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGATGTAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACAGATGCAGCTCATGCTaGATCATCAGCAAATACTAC +
Preference number: 2 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNRCSSC*IISKYY
Trigger: GTAGTATTTGCTGATGATTCAGCATGAGCTGCATCT...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTACCAGCACCATCCTCTaGCTCAGCAGCACAGTTAAC +
Preference number: 2 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFTSTIL*LSSTVN
Trigger: GTTAACTGTGCTGCTGAGTCAGAGGATGGTGCTGGT...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp TTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTCTCACCAAATTAATATaGTCACCTTGCCTACTTGAG +
Preference number: 2 (lower is better)
Translates to: FNKRRWSSPLMIGHTVSFLTKLI*SPCLLE
Trigger: CTCAAGTAGGCAAGGTGATCATATTAATTTGGTGAG...AAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559201.5
3UTR-3UTR GCA 90 bp TCCTGGCATCACCCAGAATGGAAATCAGACGATACTGGGGTAACTCAGAAGATGAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTT +
Preference number: 2 (lower is better)
Translates to: SWHHPEWKSDDTGVTQKMSALNC*SITRFV
Trigger: AACAAATCTTGTAATGCTGCAGCAATTTAACGCACT...CATCTTCTGAGTTACCCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR GCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTTTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 2 (lower is better)
Translates to: SKQEPRMQCHAISENCLVFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCAGACAATATACTCTTaGTTCTCCTCTCAACATCAC +
Preference number: 2 (lower is better)
Translates to: SKQEPRMQCHAISENCLVQTIYS*FSSQHH
Trigger: GTGATGTTGAGAGGAGAACCAAGAGTATATTGTCTG...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAATTCAACAAACGAAGGTaGTCTTCCCCATTGATGATA +
Preference number: 2 (lower is better)
Translates to: LNHQQILRALGYSRAPIKFNKRR*SSPLMI
Trigger: TATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp GCGTTAAATTGCTGCAGCATTACAAGATTTGTTTCCTTGAATTTAAGGTGCAGAGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: ALNCCSITRFVSLNLRCRVPRHL*KLFSSQ
Trigger: TTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCAC...TCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGTCATTGAAGAGAATATaGATCCCAGTGCATTCCTTG +
Preference number: 2 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWSLKRI*IPVHSL
Trigger: CAAGGAATGCACTGGGATTCATATTCTCTTCAATGA...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAGCTGCATCATATTCTaGAGGACAGTGTGTTTGTAC +
Preference number: 2 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSCIIF*RTVCLY
Trigger: GTACAAACACACTGTCCTTCAGAATATGATGCAGCT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp TACTTGAGTAGTTTCTTTCAAGGTCATGTTGTAAAAGTCTACCGGGGAATGACGTCATGCTGTTATGTGTaGACTCTGCCCTTCACTTTA +
Preference number: 2 (lower is better)
Translates to: YLSSFFQGHVVKVYRGMTSCCYV*TLPFTL
Trigger: TAAAGTGAAGGGCAGAGTTCACACATAACAGCATGA...CGTCATTCCCCGGTAGACTTTTACAACATGACCTTGAAAGAAACTACTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558032.5
ENST00000558204.5
3UTR-3UTR CCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTTTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGACATCACCTTCAAGCTaGGATCTCATTTCTATACCA +
Preference number: 2 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWTSPSS*DLISIP
Trigger: TGGTATAGAAATGAGATCCCAGCTTGAAGGTGATGT...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTGAGTGTAGAACTAGATaGGAGGATCGCCATTCGACG +
Preference number: 2 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFECRTR*EDRHST
Trigger: CGTCGAATGGCGATCCTCCCATCTAGTTCTACACTC...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAAGGCATGATGAGAAATaGTTTACATGCATTGTTTCT +
Preference number: 2 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRRHDEK*FTCIVS
Trigger: AGAAACAATGCATGTAAAGCATTTCTCATCATGCCT...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTACATCTTTCCAATCTaGCAGAATCCCACAGACAAT +
Preference number: 2 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENYIFPI*QNPTDN
Trigger: ATTGTCTGTGGGATTCTGGCAGATTGGAAAGATGTA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR GCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGAAAATTCTTCCCAGATaGCAGATCCTTAAGACTAAC +
Preference number: 2 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWKILPR*QILKTN
Trigger: GTTAGTCTTAAGGATCTGGCATCTGGGAAGAATTTT...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CCA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTCTGAGAAAGAGATGTTaGAGGCAGGGCAAATTATCC +
Preference number: 2 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFLRKRC*RQGKLS
Trigger: GGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAG...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR TCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTCTTCAGAACGCAAAATaGGTTTGGAGTGTAGAACTA +
Preference number: 2 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTLQNAK*VWSVEL
Trigger: TAGTTCTACACTCCAAACTCATTTTGCGTTCTGAAG...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp TACTTGAGTAGTTTCTTTCAAGGTCATGTTGTAAAAGTCTACCGGGGAATGACGTCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 2 (lower is better)
Translates to: YLSSFFQGHVVKVYRGMTSSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...CGTCATTCCCCGGTAGACTTTTACAACATGACCTTGAAAGAAACTACTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
3UTR-3UTR TCA 90 bp CCGAGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTTTTGTCTTGCCTACTTaGGTAGTTTCTTTCAAGGTC +
Preference number: 2 (lower is better)
Translates to: PSYKIVLKVQQTKVVFPIFVLPT*VVSFKV
Trigger: GACCTTGAAAGAAACTACTCAAGTAGGCAAGACAAA...AATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558204.5
3UTR-3UTR CCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTAAGCCAAAAACCTTGTaGCCATCATTGACTACTGTT +
Preference number: 2 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTKPKTL*PSLTTV
Trigger: AACAGTAGTCAATGATGGCCACAAGGTTTTTGGCTT...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTTCCTATCCCAGTTTTaGCTCATTTGCATATTCTCT +
Preference number: 2 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTFLSQF*LICIFS
Trigger: AGAGAATATGCAAATGAGTCAAAACTGGGATAGGAA...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR TCA 90 bp ATTTTTGGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCACAACTGGATTTCCTTaGGGATCAATTGTCAACTGG +
Preference number: 2 (lower is better)
Translates to: IFGLLSAVGRASYRNFYCTTGFP*GSIVNW
Trigger: CCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGT...GCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR GCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTTCTCTACACATTATTaGAATGAATCCAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTFSTHY*NESSCQ
Trigger: TTGGCAGCTGGATTCATTGCAATAATGTGTAGAGAA...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CAA 90 bp ACCAGATATGTAGCCCTTGTCTTCCCAAATAAATCTACAAGCTCCTaGGGTGATGGACCTCATTTTACATTCTTTATATTCTTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: TRYVALVFPNKSTSS*GDGPHFTFFIFLVK
Trigger: TTTTACCAAGAATATAAAGAATGTAAAATGAGGTCCATCACCCAAGGAGCTTGTAGATTTATTTGGGAAGACAAGGGCTACATATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558032.5
3UTR GCA 72 bp AAGAGAGAGACCCTATTACCAGGCCTGAAGCAGGTCTaGATAGAGCCAGCAGTGGCTGGGATGGCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: KRETLLPGLKQV*IEPAVAGMACC
Trigger: GCAGCAAGCCATCCCAGCCACTGCTGGCTCTATGCAGACCTGCTTCAGGCCTGGTAATAGGGTCTCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR GCA 72 bp CTAGAGGCCCTGTTTCCTCTGGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGGGGTCCTGAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: LEALFPLGMQRG*FHQSDRGPEES
Trigger: ACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACAGGGCCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp TCATTCCTGCTGTTTGAACACTCCAATTCCTATCCAGAGATTCCAGTGCTCCTGGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGC +
Preference number: 3 (lower is better)
Translates to: SFLLFEHSNSYPEIPVLLGYSLL*QVPLSS
Trigger: GCTCGACAGTGGGACTTGCAACAACAACGAGTAGCC...CAGGAGCACTGGAATCTCTGGATAGGAATTGGAGTGTTCAAACAGCAGGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp TCATTCCTGCTGTTTGAACACTCCAATTCCTATCCAGAGATTCCAGTGCTCCTGCAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: SFLLFEHSNSYPEIPVLLQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...CAGGAGCACTGGAATCTCTGGATAGGAATTGGAGTGTTCAAACAGCAGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 3 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGACAACGTATTGGGTGTTaGCTGTGTGCCAGGCATGAT +
Preference number: 3 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRQRIGC*LCARHD
Trigger: ATCATGCCTGGCACACAGCAAACACCCAATACGTTG...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CCA 72 bp TCAGAACGCAAAATGAGTTTGGAGTGTAGAACTAGATaGGAGGATCGCCATTCGACGTTTGAGACCCGACAA +
Preference number: 3 (lower is better)
Translates to: SERKMSLECRTR*EDRHSTFETRQ
Trigger: TTGTCGGGTCTCAAACGTCGAATGGCGATCCTCCCATCTAGTTCTACACTCCAAACTCATTTTGCGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 3 (lower is better)
Translates to: LNHQQILRALGYSRAPIKVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 3 (lower is better)
Translates to: NHQQILRALGYSRAPIKAVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACCAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR TCA 72 bp AAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCT +
Preference number: 3 (lower is better)
Translates to: KARTKDAVPRHL*KLFSSQRLFGP
Trigger: AGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR CCA 72 bp TTCCTGGCATCACCCAGAATGGAAATCAGACGATACTaGGGTAACTCAGAAGATGCTACATGTGCTAGGATT +
Preference number: 3 (lower is better)
Translates to: FLASPRMEIRRY*GNSEDATCARI
Trigger: AATCCTAGCACATGTAGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 3 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGTCCATATGTTTCAGTTaGGAGAGGCTAAAGGATCAG +
Preference number: 3 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMSICFS*ERLKDQ
Trigger: CTGATCCTTTAGCCTCTCCAAACTGAAACATATGGA...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATCCATATGTTTCAGTTaGGAGAGGCTAAAGGATCAG +
Preference number: 3 (lower is better)
Translates to: QEPRMQCHAISENCLVPKSICFS*ERLKDQ
Trigger: CTGATCCTTTAGCCTCTCCAAACTGAAACATATGGA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 3 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENRWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561081.5
3UTR-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 3 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
3UTR-3UTR CAA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAATTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 3 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTCAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGCTTCCTATCCCAGTTTaGACTCATTTGCATATTCTC +
Preference number: 3 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMLPIPV*THLHIL
Trigger: GAGAATATGCAAATGAGTCAAAACTGGGATAGGAAG...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGTGCCCCCTCCTGAAGTaGATTCTCTACACATTATTG +
Preference number: 3 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWCPLLK*ILYTLL
Trigger: CAATAATGTGTAGAGAATCAACTTCAGGAGGGGGCA...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTGACAACTGGATTTCCTaGAGGATCAATTGTCAACTG +
Preference number: 3 (lower is better)
Translates to: SKQEPRMQCHAISENCLVDNWIS*RINCQL
Trigger: CAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTC...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR TCA 72 bp GCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTaGTGGCAACTCAATCTTTTCGGTAGTTCAAGCCAA +
Preference number: 3 (lower is better)
Translates to: ADVPFTDCSHLS*WQLNLFGSSSQ
Trigger: TTGGCTTGAACTACCGAAAAGATTGAGTTGCCATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR TCA 72 bp TTGAGATGCATTGTGTATTCCATAAGACGGAATTCCTaGTCCTTCCTCCCAGCAGATGTTCCATTCACAGAT +
Preference number: 3 (lower is better)
Translates to: LRCIVYSIRRNS*SFLPADVPFTD
Trigger: ATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATGGAATACACAATGCATCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGACTTCCTATCCCAGTTTaGACTCATTTGCATATTCTC +
Preference number: 3 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRLPIPV*THLHIL
Trigger: GAGAATATGCAAATGAGTCAAAACTGGGATAGGAAG...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTACTATTAAAAGAGCATTaGAGAGCTAACAATGGAAGG +
Preference number: 3 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLLLKEH*RANNGR
Trigger: CCTTCCATTGTTAGCTCTCAAATGCTCTTTTAATAG...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR TCA 72 bp TTCGGTAGTTCAAGCCAAAAACCTTGTGGCCATCATTaGCTACTGTTTCTCATACTCCATATCCAGTTCTGT +
Preference number: 3 (lower is better)
Translates to: FGSSSQKPCGHH*LLFLILHIQFC
Trigger: ACAGAACTGGATATGGAGTATGAGAAACAGTAGTCAATGATGGCCACAAGGTTTTTGGCTTGAACTACCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR GCA 72 bp CTAACAAGCTCAATGAACATCTGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATGTTGATTTCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: LTSSMNICGQSF*KASFFMLISVA
Trigger: AGCCACAGAAATCAACATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CCA 72 bp TATGACTGCATCCCTAACAAGCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGCCTCATTTTTCATGTT +
Preference number: 3 (lower is better)
Translates to: YDCIPNKLNEHL*PKLLQSLIFHV
Trigger: AACATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAGGGATGCAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 3 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 3 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
3UTR-3UTR CAA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTG +
Preference number: 3 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFNIGYS*LLQVPL
Trigger: CAGTGGGACTTGCAACAACAACGAGTAGCCAATATT...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR TCA 72 bp CAGGGCAAATTATCCACATCTCTCACGAAAGTGATTTaGTTGTGTCGCAAGTTAAGTTCAGTTAGTGAATCC +
Preference number: 3 (lower is better)
Translates to: QGKLSTSLTKVI*LCRKLSSVSES
Trigger: GGATTCACTAACTGAACTTAACTTGCGACACAATCAAATCACTTTCGTGAGAGATGTGGATAATTTGCCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR GCA 72 bp TCTTCATTTGTAGCAATATTGGCTACTCGTTGTTGTTaGAAGTCCCACTGTCGAGCTACGTTGTTAATTGTT +
Preference number: 3 (lower is better)
Translates to: SSFVAILATRCC*KSHCRATLLIV
Trigger: AACAATTAACAACGTAGCTCGACAGTGGGACTTGCAACAACAACGAGTAGCCAATATTGCTACAAATGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR GCA 72 bp TGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTTGTTTCCTTGAATTTA +
Preference number: 3 (lower is better)
Translates to: WSIRRSWASALN*CSITRFVSLNL
Trigger: TAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 3 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR TCA 72 bp AATTATCAGCTAAAAGTAGGTAGATGCAGCTCATGCTaGATCATCAGCAAATACTACGTGCTTTGGGCTATA +
Preference number: 3 (lower is better)
Translates to: NYQLKVGRCSSC*IISKYYVLWAI
Trigger: TATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAGCATGAGCTGCATCTACCTACTTTTAGCTGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
3UTR TCA 72 bp TATTTCCAGAGTGTAAAATTGACAACTGGATTTCCTTaGGGATCAATTGTCAACTGGTCAATACGACGGAGT +
Preference number: 3 (lower is better)
Translates to: YFQSVKLTTGFP*GSIVNWSIRRS
Trigger: ACTCCGTCGTATTGACCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTCAATTTTACACTCTGGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR GCA 72 bp TCAACTCCCAACTCATATTCACACCTACTTAACACCTaGACTTGGATATTTAACAACCATCTCAACATATGC +
Preference number: 3 (lower is better)
Translates to: STPNSYSHLLNT*TWIFNNHLNIC
Trigger: GCATATGTTGAGATGGTTGTTAAATATCCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp CACCAAATTAATATGATCACCAGATATGTAGCCCTTGTCTTCCCAAATAAATCTTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 3 (lower is better)
Translates to: HQINMITRYVALVFPNKSFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...AGATTTATTTGGGAAGACAAGGGCTACATATCTGGTGATCATATTAATTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561081.5
3UTR-3UTR CAA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTGAACGCAAAATGAGTTaGGAGTGTAGAACTAGATGG +
Preference number: 3 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFERKMS*ECRTRW
Trigger: CCATCTAGTTCTACACTCCAAACTCATTTTGCGTTC...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR-3UTR CAA 90 bp GCGTTAAATTGCTGCAGCATTACAAGATTTGTTTCCTTGAATTTAAGGTGCAGACACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTC +
Preference number: 3 (lower is better)
Translates to: ALNCCSITRFVSLNLRCRHCRAT*LIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTG...TCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp GCGTTAAATTGCTGCAGCATTACAAGATTTGTTTCCTTGAATTTAAGGTGCAGATCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGC +
Preference number: 3 (lower is better)
Translates to: ALNCCSITRFVSLNLRCRSFVAI*ATRCCC
Trigger: GCAACAACAACGAGTAGCCAATATTGCTACAAATGA...TCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR-3UTR CAA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGA +
Preference number: 3 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFKPCKA*LSPESR
Trigger: TCTAGACTCAGGACTCAACAATGCTTTACAAGGTTT...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CCA 72 bp GAATTAGGAAACTTAATCTTCAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCTATGAAAGTGAAGGAG +
Preference number: 3 (lower is better)
Translates to: ELGNLIFSLGST*TISSNSMKVKE
Trigger: CTCCTTCACTTTCATAGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTGAAGATTAAGTTTCCTAATTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCCATAGGACCCTCACTTaGTCCCTAACCCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLHRTLT*SLTQQT
Trigger: GGTCTGCTGGGTTAGGGATCAAGTGAGGGTCCTATG...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCGATTGCCATCAAAGGTaGTGTCCGAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CREGASINLTGVLRRVRIDCHQR*CPRGKK
Trigger: CTTCTTCCCTCTCGGACATCACCTTTGATGGCAATC...GATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTAGGCAGGAGAATGGCGTaGACCTGGGAAGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLGRRMA*TWEAEL
Trigger: AAGCTCCGCTTCCCAGGTTCACGCCATTCTCCTGCC...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCAGGCAGAGAATTGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLRQRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCAATTCTCTGCCT...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR GCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGGGCCCACCTCAGCGCTaGCCGCGCGAAATTTGTATC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRGPPQR*PREICI
Trigger: GATACAAATTTCGCGCGGGCAGCGCTGAGGTGGGCC...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAGGCCCACCTCAGCGCTaGCCGCGCGAAATTTGTATC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKGPPQR*PREICI
Trigger: GATACAAATTTCGCGCGGGCAGCGCTGAGGTGGGCC...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGCTGCCATCATCGCCCTaGCTTTCCCAGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKLPSSP*LSQSCW
Trigger: CCAGCAGGACTGGGAAAGGCAGGGCGATGATGGCAG...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CCA 90 bp CAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTGCTTGTGTCCACTaGCTCCTGGGGAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QQTKVVFPIDDRTYGQLLSACVH*LLGSSA
Trigger: TGCGCTGCTCCCCAGGAGCCAGTGGACACAAGCAGA...CAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCTGCTCAGGGTTACCATaGAAACGACCATTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: CREGASINLTGVLRRVRICSGLP*KRPFPV
Trigger: GACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCA...GATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLGMQRG*FHQSDR
Trigger: CCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCC...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAACCCAGTCCTGCTGGCTaGGCTCAGTCTTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKPSPAG*AQSLGG
Trigger: ACCACCTAAAGACTGAGCGCAGCCAGCAGGACTGGG...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTTCCCAGGACCTCCTGTaGTTCCCTGAGAATGCATTC +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTSQDLL*FPENAF
Trigger: GAATGCATTCTCAGGGAACCACAGGAGGTCCTGGGA...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCATCTGCTTGTGTCCACTaGCTCCTGGGGAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKASACVH*LLGSSA
Trigger: TGCGCTGCTCCCCAGGAGCCAGTGGACACAAGCAGA...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCAGCAGAGACCAAAGCTaGGGAATAAAGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLSRDQS*GIKRLG
Trigger: ACCAAGCCTCTTTATTCCTCAGCTTTGGTCTCTGCT...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAACATAGGACCCTCACTTaGTCCCTAACCCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKHRTLT*SLTQQT
Trigger: GGTCTGCTGGGTTAGGGATCAAGTGAGGGTCCTATG...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGGCGGGTGGATCACTTaGGGTCAGGAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARGGWIT*GQEFKT
Trigger: GGTCTTGAATTCCTGACCTCAAGTGATCCACCCGCC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR GCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGGCCTGAAGCAGGTCTaGATAGAGCCAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKGLKQV*IEPAVA
Trigger: AGCCACTGCTGGCTCTATGCAGACCTGCTTCAGGCC...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCAAATTTGTATCCCTCTaGTTGTGTCCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CREGASINLTGVLRRVRIKFVSL*LCPLAP
Trigger: AGGAGCCAGTGGACACAAGCAGAGGGATACAAATTT...GATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGTTCGTGAGAGCCCAGTaGGTCACCACTTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKFVRAQ*VTTSSF
Trigger: GAACGAGGAAGTGGTGACGCACTGGGCTCTCACGAA...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCATTCGTGAGAGCCCAGTaGGTCACCACTTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: PNRRTRRHLRVESPLISSFVRAQ*VTTSSF
Trigger: GAACGAGGAAGTGGTGACGCACTGGGCTCTCACGAA...TGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTTCGTGAGAGCCCAGTaGGTCACCACTTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: QQTKVVFPIDDRTYGQLLFVRAQ*VTTSSF
Trigger: GAACGAGGAAGTGGTGACGCACTGGGCTCTCACGAA...CAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR GCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGCTGGGAGGTGGAGGTTaGAGTGAGCGAGATCGCACC +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWLGGGG*SERDRT
Trigger: GGTGCGATCTCGCTCACTGCAACCTCCACCTCCCAG...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CCA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGAGAGCCAGCAGTGGCTaGGATGGCTTGCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLRASSG*DGLLPF
Trigger: AAATGGCAGCAAGCCATCCCAGCCACTGCTGGCTCT...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp GTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACTCTGCTTGTGTCCACTaGCTCCTGGGGAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VLKVQQTKVVFPIDDRTYSACVH*LLGSSA
Trigger: TGCGCTGCTCCCCAGGAGCCAGTGGACACAAGCAGA...GTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGCTTTCCCAGTCCTGCTaGCTGCGCTCAGTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKLSQSC*LRSVFR
Trigger: CCTAAAGACTGAGCGCAGCCAGCAGGACTGGGAAAG...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR TCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAGATCTGCCTTCCAGGTaGCGCTACAGCGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRDLPSR*RYSGDS
Trigger: TGAATCTCCGCTGTAGCGTCACCTGGAAGGCAGATC...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260382.10
CDS-3UTR TCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTGATCTGCCTTCCAGGTaGCGCTACAGCGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVDLPSR*RYSGDS
Trigger: TGAATCTCCGCTGTAGCGTCACCTGGAAGGCAGATC...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACGATCTGCCTTCCAGGTaGCGCTACAGCGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: SSPLMIGHTVSFCLSRLNDLPSR*RYSGDS
Trigger: TGAATCTCCGCTGTAGCGTCACCTGGAAGGCAGATC...GTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR TCA 90 bp CAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCAATCTGGATCTGCCTTCCAGGTaGCGCTACAGCGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: QKDTKTSQSRKPTNFFNLDLPSR*RYSGDS
Trigger: TGAATCTCCGCTGTAGCGTCACCTGGAAGGCAGATC...CAGATTGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559670.5
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCAGGCAGGAGAATGGCGTaGACCTGGGAAGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIAGRRMA*TWEAEL
Trigger: AAGCTCCGCTTCCCAGGTTCACGCCATTCTCCTGCC...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTACTAAGATTCCCAGGGTaGCTGGGCCAAGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLLRFPG*LGQESM
Trigger: CATGCTTTCTTGGCCCAGTCACCCTGGGAATCTTAG...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGCTAAGATTCCCAGGGTaGCTGGGCCAAGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMLRFPG*LGQESM
Trigger: CATGCTTTCTTGGCCCAGTCACCCTGGGAATCTTAG...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGACCAGCACCATCCTCTaGCTCAGCAGCACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKTSTIL*LSSTVN
Trigger: GTTAACTGTGCTGCTGAGTCAGAGGATGGTGCTGGT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGAGCAAGAACCAAGGATaGAGTGCCACGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKSKNQG*SATPSL
Trigger: CAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAAGCAAGAACCAAGGATaGAGTGCCACGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKSKNQG*SATPSL
Trigger: CAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCT...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGGTGGCTGGGATGGCTTaGTGCCATTTCATTGAGTGC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRVAGMA*CHFIEC
Trigger: GCACTCAATGAAATGGCAGCAAGCCATCCCAGCCAC...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACGGCCTGAAGCAGGTCTaGATAGAGCCAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNGLKQV*IEPAVA
Trigger: AGCCACTGCTGGCTCTATGCAGACCTGCTTCAGGCC...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGAGCCTCAGGTCCACCTaGACACTTGGTAACCATCCT +
Preference number: 4 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMSLRST*TLGNHP
Trigger: AGGATGGTTACCAAGTGTGCAGGTGGACCTGAGGCT...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TACTTGAGTAGTTTCTTTCAAGGTCATGTTGTAAAAGTCTACCGGGGAATGACGGGCCCACCTCAGCGCTaGCCGCGCGAAATTTGTATC +
Preference number: 4 (lower is better)
Translates to: YLSSFFQGHVVKVYRGMTGPPQR*PREICI
Trigger: GATACAAATTTCGCGCGGGCAGCGCTGAGGTGGGCC...CGTCATTCCCCGGTAGACTTTTACAACATGACCTTGAAAGAAACTACTCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR GCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGCTGGCCACACTGGTTaGTATAACCACCACCACTTC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARAGHTG*YNHHHF
Trigger: GAAGTGGTGGTGGTTATAGCAACCAGTGTGGCCAGC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTTGCCTTTCCCAGTCCTaGTGGCTGCGCTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVCLSQS*WLRSVF
Trigger: AAAGACTGAGCGCAGCCAGCAGGACTGGGAAAGGCA...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR GCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGACTCCATCCTTCACTaGCATCATCGCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARDSILH*HHRPAF
Trigger: AAAGGCAGGGCGATGATGGCAGTGAAGGATGGAGTC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLLNEHL*PKLLQS
Trigger: GCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAG...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGATCCCAGGACCTCCTGTaGTTCCCTGAGAATGCATTC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARSQDLL*FPENAF
Trigger: GAATGCATTCTCAGGGAACCACAGGAGGTCCTGGGA...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTAGATTCCCAGGGTGACTaGGCCAAGAAAGCATGTGAG +
Preference number: 4 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLDSQGD*AKKACE
Trigger: CTCACATGCTTTCTTGGCCCAGTCACCCTGGGAATC...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGGATTCCCAGGGTGACTaGGCCAAGAAAGCATGTGAG +
Preference number: 4 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLDSQGD*AKKACE
Trigger: CTCACATGCTTTCTTGGCCCAGTCACCCTGGGAATC...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAAGAGCCAGCAGTGGCTaGGATGGCTTGCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRRASSG*DGLLPF
Trigger: AAATGGCAGCAAGCCATCCCAGCCACTGCTGGCTCT...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGACGACCATTTCCGGTCTaGACCTCTCCCGAATCGATA +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARRPFPV*TSPESI
Trigger: TATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCG...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACCTGCGACCATTTCCGGTCTaGACCTCTCCCGAATCGATA +
Preference number: 4 (lower is better)
Translates to: SPLMIGHTVSFCLSRLNLRPFPV*TSPESI
Trigger: TATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCG...CAGGTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TCATTCCTGCTGTTTGAACACTCCAATTCCTATCCAGAGATTCCAGTGCTCCTGCGACCATTTCCGGTCTaGACCTCTCCCGAATCGATA +
Preference number: 4 (lower is better)
Translates to: SFLLFEHSNSYPEIPVLLRPFPV*TSPESI
Trigger: TATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCG...CAGGAGCACTGGAATCTCTGGATAGGAATTGGAGTGTTCAAACAGCAGGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCGACCATTTCCGGTCTaGACCTCTCCCGAATCGATA +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRRPFPV*TSPESI
Trigger: TATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCG...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTATTATGTCAAGTTGGCTaGGCGAGGTGGCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLLCQVG*ARWLTP
Trigger: AGGAGTGAGCCACCTCGCCCAGCCAACTTGACATAA...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR TCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCATCACCTTGCCTACTTaGGTAGTTTCTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLITLPT*VVSFKV
Trigger: GACCTTGAAAGAAACTACTCAAGTAGGCAAGGTGAT...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTTTGTACCATGACTCTTaGGCTATGGGATTGCCATCA +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTLYHDS*AMGLPS
Trigger: TGATGGCAATCCCATAGCTCAAGAGTCATGGTACAA...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAACCAGCACCATCCTCTaGCTCAGCAGCACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKATSTIL*LSSTVN
Trigger: GTTAACTGTGCTGCTGAGTCAGAGGATGGTGCTGGT...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCACAGCGGACACTTGCTaGTGGGGGATTCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFTADTC*WGIPGG
Trigger: ACCTCCTGGAATCCCCCATCAGCAAGTGTCCGCTGT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR GCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGCTACTCGTTGTTGTTaGAAGTCCCACTGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARATRCC*KSHCRA
Trigger: AGCTCGACAGTGGGACTTGCAACAACAACGAGTAGC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKGMQRG*FHQSDR
Trigger: CCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCC...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGTGTTTCCTCTGGGAATaGAGAGAGGGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRCFLWE*REGASI
Trigger: GATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACA...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTACATGTTTCCTCTGGGAATaGAGAGAGGGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: NWSIRRSWASALNCCSITCFLWE*REGASI
Trigger: GATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACA...TGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCGCGAATTTCTATGACTaGATCCCTAACAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: CREGASINLTGVLRRVRIANFYD*IPNKLN
Trigger: ATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC...GATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKEPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKAREPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTAGCAAGAACCAAGGATaGAGTGCCACGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: NKRRWSSPLMIGHTVSFCSKNQG*SATPSL
Trigger: CAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCT...ACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR GCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCAGAACCCTTCACTCATaGATCCCTAATACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLRTLHS*IPNTSE
Trigger: CTCAGAAGTATTAGGGATGCATGAGTGAAGGGTTCT...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGTGGCTGGGATGGCTTaGTGCCATTTCATTGAGTGC +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEVAGMA*CHFIEC
Trigger: GCACTCAATGAAATGGCAGCAAGCCATCCCAGCCAC...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGACTTCACCATCCAGCTaGTGTACCAGAACATCGGGT +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKTSPSS*CTRTSG
Trigger: ACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACCTGATCTCCCAGGCAACCTaGTCAGGGTTACCATGGAAA +
Preference number: 4 (lower is better)
Translates to: SPLMIGHTVSFCLSRLNLISQAT*SGLPWK
Trigger: TTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGAT...CAGGTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR GCA 90 bp GTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATATCTCCCAGGCAACCTaGTCAGGGTTACCATGGAAA +
Preference number: 4 (lower is better)
Translates to: VFPQQKDTKTSQSRKPTNISQAT*SGLPWK
Trigger: TTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGAT...ATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GAGATTCCAGTGCTCCTGAGCCATATAGGGAAAGTGTATCCCCGTCCACTTCAAGGATCAATTGTCAACTaGTCAATACGACGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: EIPVLLSHIGKVYPRPLQGSIVN*SIRRSW
Trigger: CCAACTCCGTCGTATTGACCAGTTGACAATTGATCC...TTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGAGATCTTAAGGATGTaGGTCTTTCTCAGAACCGCA +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTEILRM*VFLRTA
Trigger: TGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTC...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACAGCAGTGGCTGGGATaGCTTGCTGCCATTTCATTG +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEQQWLG*LAAISL
Trigger: CAATGAAATGGCAGCAAGCCATCCCAGCCACTGCTG...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGGAGTGTAGAACTAGATaGGAGGATCGCCATTCGACG +
Preference number: 4 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMECRTR*EDRHST
Trigger: CGTCGAATGGCGATCCTCCCATCTAGTTCTACACTC...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGATGCCAGGCCTTCAGTaGAATGAAGCTCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLMPGLQ*NEAQEV
Trigger: CACTTCCTGAGCTTCATTCCACTGAAGGCCTGGCAT...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATGCTCAGGGTTACCATaGAAACGACCATTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKCSGLP*KRPFPV
Trigger: GACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp ACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTGCTCAGGGTTACCATaGAAACGACCATTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: TKVVFPIDDRTYGQLLSFCSGLP*KRPFPV
Trigger: GACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCA...GAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCAATCTACAAGCTCCTTaGGTGATGGACCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: CREGASINLTGVLRRVRINLQAP*VMDLIL
Trigger: TAAAATGAGGTCCATCACCCAAGGAGCTTGTAGATT...GATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR CCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGAATACAAAAATGAGCTaGGCATGGTGGCGGGCACCT +
Preference number: 4 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMNTKMS*AWWRAP
Trigger: AGGTGCCCGCCACCATGCCCAGCTCATTTTTGTATT...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGAAAGTTATGTCAAGTTaGCTGGGCGAGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRKVMSS*LGEVAH
Trigger: GTGAGCCACCTCGCCCAGCCAACTTGACATAACTTT...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR TCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGATTGCCATCAAAGGTaGTGTCCGAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEDCHQR*CPRGKK
Trigger: CTTCTTCCCTCTCGGACATCACCTTTGATGGCAATC...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTAGTGTGTTTGTACCATaGCTCTTGAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTSVFVP*LLSYGI
Trigger: AATCCCATAGCTCAAGAGTCATGGTACAAACACACT...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCTTGTAAAGCATTGTTaGGTCCTGAGTCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRLVKHC*VLSLEA
Trigger: GGCCTCTAGACTCAGGACTCAACAATGCTTTACAAG...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAACTTGTAAAGCATTGTTaGGTCCTGAGTCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKLVKHC*VLSLEA
Trigger: GGCCTCTAGACTCAGGACTCAACAATGCTTTACAAG...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCACTTGTAAAGCATTGTTaGGTCCTGAGTCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PNRRTRRHLRVESPLISSLVKHC*VLSLEA
Trigger: GGCCTCTAGACTCAGGACTCAACAATGCTTTACAAG...TGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARVPRHL*KLFSSQ
Trigger: TTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCAC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCATCCTCCATATAGGTaGATAGCAGGAACCGTACCT +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRHPPYR*IAGTVP
Trigger: AGGTACGGTTCCTGCTATTCACCTATATGGAGGATG...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCCTAAGATTGTTTTTCTaGAGTGGCATCATCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLLRLFF*SGIISS
Trigger: GCTAGAGATGATGCCACTTCAGAAAAACAATCTTAG...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGAGCAGAGACCAAAGCTaGGGAATAAAGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMSRDQS*GIKRLG
Trigger: ACCAAGCCTCTTTATTCCTCAGCTTTGGTCTCTGCT...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAAGGCCTTCAGTGGAATaGAGCTCAGGAAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQRPSVE*SSGSEE
Trigger: CTCCTCACTTCCTGAGCTTCATTCCACTGAAGGCCT...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGATAAGACGGAATTCCTaGTCCTTCCTCCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKIRRNS*SFLPAD
Trigger: ATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTAT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAAGCTACTCGGGATGCTaGGGCAGAGAATTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQESYSGC*GRELLE
Trigger: TTCAAGCAATTCTCTGCCTCAGCATCCCGAGTAGCT...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR GCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEGMQRG*FHQSDR
Trigger: CCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCC...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKAGMQRG*FHQSDR
Trigger: CCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCC...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAATGTTTCCTCTGGGAATaGAGAGAGGGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQECFLWE*REGASI
Trigger: GATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACA...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCATGTTTCCTCTGGGAATaGAGAGAGGGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKACFLWE*REGASI
Trigger: GATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACA...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGGTCTCTGCATGTCTCTaGATGTCTTTGCTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRVSACL*MSLLSY
Trigger: GTACGACAGCAAAGACATGCAGAGACATGCAGAGAC...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTATCAGACTATGGGATTTaGATCTCTTCCCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLSDYGI*ISSPSL
Trigger: CAGGGAAGGGGAAGAGATGCAAATCCCATAGTCTGA...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAACTTCACCATCCAGCTaGTGTACCAGAACATCGGGT +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKTSPSS*CTRTSG
Trigger: ACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAAGCCTCAGGTCCACCTaGACACTTGGTAACCATCCT +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQSLRST*TLGNHP
Trigger: AGGATGGTTACCAAGTGTGCAGGTGGACCTGAGGCT...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTTCGTGAGAGCCCAGTaGGTCACCACTTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFFVRAQ*VTTSSF
Trigger: GAACGAGGAAGTGGTGACGCACTGGGCTCTCACGAA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAATCTCCCAGGCAACCTaGTCAGGGTTACCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKISQAT*SGLPWK
Trigger: TTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGAT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GAGATTCCAGTGCTCCTGAGCCATATAGGGAAAGTGTATCCCCGTCCACTTCAAGAAATCAGACGATACTaGGGTAACTCAGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: EIPVLLSHIGKVYPRPLQEIRRY*GNSEDA
Trigger: AGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTC...TTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGAAATCAGACGATACTaGGGTAACTCAGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTEIRRY*GNSEDA
Trigger: AGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTC...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGTGGCATCACCCAGAATaGAAATCAGACGATACTGGG +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRWHHPE*KSDDTG
Trigger: CCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCA...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGTGGCATCACCCAGAATaGAAATCAGACGATACTGGG +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKWHHPE*KSDDTG
Trigger: CCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCA...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGTGGCATCACCCAGAATaGAAATCAGACGATACTGGG +
Preference number: 4 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLWHHPE*KSDDTG
Trigger: CCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCA...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGATGGCATCACCCAGAATaGAAATCAGACGATACTGGG +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARWHHPE*KSDDTG
Trigger: CCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCA...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GAGATTCCAGTGCTCCTGAGCCATATAGGGAAAGTGTATCCCCGTCCACTTCAATTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: EIPVLLSHIGKVYPRPLQFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...TTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CAA 72 bp CAGCTCATGCTGAATCATCAGCAAATACTACGTGCTTaGGGCTATAGCAGGGCACCAATCAAAGCAAGAACC +
Preference number: 4 (lower is better)
Translates to: QLMLNHQQILRA*GYSRAPIKART
Trigger: GGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAGCATGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAGATTGCCATCAAAGGTaGTGTCCGAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQDCHQR*CPRGKK
Trigger: CTTCTTCCCTCTCGGACATCACCTTTGATGGCAATC...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGTTGTACCATGACTCTTaGGCTATGGGATTGCCATCA +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRLYHDS*AMGLPS
Trigger: TGATGGCAATCCCATAGCTCAAGAGTCATGGTACAA...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCATTCCTGCTGTTTGAACACTCCAATTCCTATCCAGAGATTCCAGTGCTCCTGTTGTACCATGACTCTTaGGCTATGGGATTGCCATCA +
Preference number: 4 (lower is better)
Translates to: SFLLFEHSNSYPEIPVLLLYHDS*AMGLPS
Trigger: TGATGGCAATCCCATAGCTCAAGAGTCATGGTACAA...CAGGAGCACTGGAATCTCTGGATAGGAATTGGAGTGTTCAAACAGCAGGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCAGTGTGTTTGTACCATaGCTCTTGAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: PQQKDTKTSQSRKPTNFFSVFVP*LLSYGI
Trigger: AATCCCATAGCTCAAGAGTCATGGTACAAACACACT...GAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGGCCAAGAAAGCATGTaGGTGTCAAGTCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKGQESM*VSSLFS
Trigger: GCTAAAGAGACTTGACACTCACATGCTTTCTTGGCC...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAATAAGACGGAATTCCTaGTCCTTCCTCCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKIRRNS*SFLPAD
Trigger: ATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTAT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp GTCAACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTAGTAGATACCGAAATTaGTTTTTCCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: VNWSIRRSWASALNCCSISRYRN*FFLASP
Trigger: GGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACT...AATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCTGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATG +
Preference number: 4 (lower is better)
Translates to: PQQKDTKTSQSRKPTNFFCGQSF*KASFFM
Trigger: CATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACA...GAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGCGAATTTCTATGACTaGATCCCTAACAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTANFYD*IPNKLN
Trigger: ATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQEPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAGCAAGAACCAAGGATaGAGTGCCACGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSKNQG*SATPSL
Trigger: CAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAAACGTATTGGGTGTTTaGTGTGTGCCAGGCATGATG +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKNVLGV*CVPGMM
Trigger: CATCATGCCTGGCACACAGCAAACACCCAATACGTT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCAAAATTCTTCCCAGATaGCAGATCCTTAAGACTAAC +
Preference number: 4 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLKILPR*QILKTN
Trigger: GTTAGTCTTAAGGATCTGGCATCTGGGAAGAATTTT...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCAGCTTTTGTCTTTCTAGGCTCAACCTGTCTGAGTAAAGAATTTTCTCTTCAGTTCGTGAGAGCCCAGTaGGTCACCACTTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SAFVFLGSTCLSKEFSLQFVRAQ*VTTSSF
Trigger: GAACGAGGAAGTGGTGACGCACTGGGCTCTCACGAA...CTGAAGAGAAAATTCTTTACTCAGACAGGTTGAGCCTAGAAAGACAAAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR GCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAATCCGCAGAACAAGCTaGACCACTCGCAAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKIRRTS*TTRKVK
Trigger: TTTTACCTTGCGAGTGGTGCAGCTTGTTCTGCGGAT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560158.6
CDS-3UTR CCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGCTGAGAAAGAGATGTTaGAGGCAGGGCAAATTATCC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKLRKRC*RQGKLS
Trigger: GGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAG...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAACTGAGAAAGAGATGTTaGAGGCAGGGCAAATTATCC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKLRKRC*RQGKLS
Trigger: GGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAG...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAACTCTTCATATCTAGCTaGCGCAGCTGCATCATATTC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKLFISS*RSCIIF
Trigger: GAATATGATGCAGCTGCGCCAGCTAGATATGAAGAG...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGACTCTTCATATCTAGCTaGCGCAGCTGCATCATATTC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARLFISS*RSCIIF
Trigger: GAATATGATGCAGCTGCGCCAGCTAGATATGAAGAG...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGTCAATACGACGGAGTTaGGCTAGTGCGTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKSIRRS*ASALNC
Trigger: GCAATTTAACGCACTAGCCCAACTCCGTCGTATTGA...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGATCAATACGACGGAGTTaGGCTAGTGCGTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARSIRRS*ASALNC
Trigger: GCAATTTAACGCACTAGCCCAACTCCGTCGTATTGA...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAGGATCAATTGTCAACTaGTCAATACGACGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKGSIVN*SIRRSW
Trigger: CCAACTCCGTCGTATTGACCAGTTGACAATTGATCC...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGAAATTGCTTTTTCCTaGCATCACCCAGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTEIAFS*HHPEWK
Trigger: TTTCCATTCTGGGTGATGCCAGGAAAAAGCAATTTC...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GAGATTCCAGTGCTCCTGAGCCATATAGGGAAAGTGTATCCCCGTCCACTTCAAGAAATTGCTTTTTCCTaGCATCACCCAGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: EIPVLLSHIGKVYPRPLQEIAFS*HHPEWK
Trigger: TTTCCATTCTGGGTGATGCCAGGAAAAAGCAATTTC...TTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRLNEHL*PKLLQS
Trigger: GCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAG...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKLNEHL*PKLLQS
Trigger: GCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAG...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTACACTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: NWSIRRSWASALNCCSITLNEHL*PKLLQS
Trigger: GCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAG...TGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGGCATTCCTAGAAGAATaGGGCATCCTCCATATAGGT +
Preference number: 4 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLAFLEE*GILHIG
Trigger: ACCTATATGGAGGATGCCCCATTCTTCTAGGAATGC...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGGAGATCTTAAGGATGTaGGTCTTTCTCAGAACCGCA +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPREILRM*VFLRTA
Trigger: TGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTC...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGCTGCAAAGCCTAGAGTaGGAACAGTTACCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWLQSLE*EQLPRL
Trigger: GAGTCTGGGTAACTGTTCCCACTCTAGGCTTTGCAG...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCGACCATTTCCGGTCTaGACCTCTCCCGAATCGATA +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENRPFPV*TSPESI
Trigger: TATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGACCACTGCAGATTAAATaGGAGGGTTTCAGTACATCC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARPLQIK*EGFSTS
Trigger: GGATGTACTGAAACCCTCCCATTTAATCTGCAGTGG...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560158.6
CDS-3UTR TCA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTGATCTGCCTTCCAGGTaGCGCTACAGCGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFDLPSR*RYSGDS
Trigger: TGAATCTCCGCTGTAGCGTCACCTGGAAGGCAGATC...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCACATCTCTCACGAAAGTaGTTTGATTGTGTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: PNRRTRRHLRVESPLISSHLSRK*FDCVAS
Trigger: ACTTGCGACACAATCAAATCACTTTCGTGAGAGATG...TGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGATTGCCATCAAAGGTaGTGTCCGAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFDCHQR*CPRGKK
Trigger: CTTCTTCCCTCTCGGACATCACCTTTGATGGCAATC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGAGTGTGTTTGTACCATaGCTCTTGAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMSVFVP*LLSYGI
Trigger: AATCCCATAGCTCAAGAGTCATGGTACAAACACACT...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACCTGAGCTGCATCATATTCTaGAGGACAGTGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SPLMIGHTVSFCLSRLNLSCIIF*RTVCLY
Trigger: GTACAAACACACTGTCCTTCAGAATATGATGCAGCT...CAGGTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR TCA 90 bp GTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATGCCTTTCTTCTTCCGTaGTTCTCTTCATATCTAGCT +
Preference number: 4 (lower is better)
Translates to: VFPQQKDTKTSQSRKPTNAFLLP*FSSYLA
Trigger: AGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGC...ATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CCTAACAAGCTCAATGAACATCTGTGGCCAAAGCTTCTGCAAAGCCTCATTTTTGTGCCACGCCATCTCTaGAAACTGTTTAGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PNKLNEHLWPKLLQSLIFVPRHL*KLFSSQ
Trigger: TTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCAC...AAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGAGATGCAGCTCATGCTaGATCATCAGCAAATACTAC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRRCSSC*IISKYY
Trigger: GTAGTATTTGCTGATGATTCAGCATGAGCTGCATCT...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGATGCAGCTCATGCTaGATCATCAGCAAATACTAC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARRCSSC*IISKYY
Trigger: GTAGTATTTGCTGATGATTCAGCATGAGCTGCATCT...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACCTGAGATGCAGCTCATGCTaGATCATCAGCAAATACTAC +
Preference number: 4 (lower is better)
Translates to: SPLMIGHTVSFCLSRLNLRCSSC*IISKYY
Trigger: GTAGTATTTGCTGATGATTCAGCATGAGCTGCATCT...CAGGTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR TCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTAGGCCTTCAGTGGAATaGAGCTCAGGAAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTRPSVE*SSGSEE
Trigger: CTCCTCACTTCCTGAGCTTCATTCCACTGAAGGCCT...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCAGCTACTCGTTGTTGTTaGAAGTCCCACTGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIAATRCC*KSHCRA
Trigger: AGCTCGACAGTGGGACTTGCAACAACAACGAGTAGC...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGCTACTCGTTGTTGTTaGAAGTCCCACTGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENATRCC*KSHCRA
Trigger: AGCTCGACAGTGGGACTTGCAACAACAACGAGTAGC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENGMQRG*FHQSDR
Trigger: CCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTGTTTCCTCTGGGAATaGAGAGAGGGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENCFLWE*REGASI
Trigger: GATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGAGTAGATACCGAAATTaGTTTTTCCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKSRYRN*FFLASP
Trigger: GGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENEPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFEPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAAGCAAGAACCAAGGATaGAGTGCCACGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLSKNQG*SATPSL
Trigger: CAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCT...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCAGCAAGAACCAAGGATaGAGTGCCACGCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLISKNQG*SATPSL
Trigger: CAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCT...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAGTCTCTGCATGTCTCTaGATGTCTTTGCTGTCGTAC +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQVSACL*MSLLSY
Trigger: GTACGACAGCAAAGACATGCAGAGACATGCAGAGAC...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAACCGCTGGCCACACTGGTTaGTATAACCACCACCACTTC +
Preference number: 4 (lower is better)
Translates to: CKSLPGNDDVSLFSLNSTAGHTG*YNHHHF
Trigger: GAAGTGGTGGTGGTTATAGCAACCAGTGTGGCCAGC...GGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR GCA 90 bp TCAGCTTTTGTCTTTCTAGGCTCAACCTGTCTGAGTAAAGAATTTTCTCTTCAGGCTGGCCACACTGGTTaGTATAACCACCACCACTTC +
Preference number: 4 (lower is better)
Translates to: SAFVFLGSTCLSKEFSLQAGHTG*YNHHHF
Trigger: GAAGTGGTGGTGGTTATAGCAACCAGTGTGGCCAGC...CTGAAGAGAAAATTCTTTACTCAGACAGGTTGAGCCTAGAAAGACAAAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCATCTCCCAGGCAACCTaGTCAGGGTTACCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFISQAT*SGLPWK
Trigger: TTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGAT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCGCTGAGGCAGAGAATTaGTTGAACCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIAEAEN*LNLGGG
Trigger: TCCACCTCCCAGGTTCAAGCAATTCTCTGCCTCAGC...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCTGAGAAAGAGATGTTaGAGGCAGGGCAAATTATCC +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVLRKRC*RQGKLS
Trigger: GGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAG...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACTGAGAAAGAGATGTTaGAGGCAGGGCAAATTATCC +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQELRKRC*RQGKLS
Trigger: GGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAG...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCTCTTCATATCTAGCTaGCGCAGCTGCATCATATTC +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVLFISS*RSCIIF
Trigger: GAATATGATGCAGCTGCGCCAGCTAGATATGAAGAG...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGGATCAATTGTCAACTaGTCAATACGACGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEGSIVN*SIRRSW
Trigger: CCAACTCCGTCGTATTGACCAGTTGACAATTGATCC...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAGGATCAATTGTCAACTaGTCAATACGACGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKAGSIVN*SIRRSW
Trigger: CCAACTCCGTCGTATTGACCAGTTGACAATTGATCC...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CCTAACAAGCTCAATGAACATCTGTGGCCAAAGCTTCTGCAAAGCCTCATTTTTTGGCATCACCCAGAATaGAAATCAGACGATACTGGG +
Preference number: 4 (lower is better)
Translates to: PNKLNEHLWPKLLQSLIFWHHPE*KSDDTG
Trigger: CCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCA...AAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVLNEHL*PKLLQS
Trigger: GCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAG...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGATTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKAKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTCTGCAAAGCCTAGAGTaGGAACAGTTACCCAGACTC +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSLQSLE*EQLPRL
Trigger: GAGTCTGGGTAACTGTTCCCACTCTAGGCTTTGCAG...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTGAGTGTAGAACTAGATaGGAGGATCGCCATTCGACG +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSECRTR*EDRHST
Trigger: CGTCGAATGGCGATCCTCCCATCTAGTTCTACACTC...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTGCTCAGGGTTACCATaGAAACGACCATTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFCSGLP*KRPFPV
Trigger: GACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
3UTR CAA 72 bp TTTCCAATCTGCCAGAATCCCACAGACAATATACTCTaGGTTCTCCTCTCAACATCACCTTCAAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FPICQNPTDNIL*VLLSTSPSSWD
Trigger: ATCCCAGCTTGAAGGTGATGTTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CAA 72 bp AGTGTAGAACTAGATGGGAGGATCGCCATTCGACGTTaGAGACCCGACAAAGTAAGGATTCAAGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SVELDGRIAIRR*RPDKVRIQEVE
Trigger: TTCTACTTCTTGAATCCTTACTTTGTCGGGTCTCAAACGTCGAATGGCGATCCTCCCATCTAGTTCTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CAA 72 bp TATCTTCACCAAGGAACTTCAGAACGCAAAATGAGTTaGGAGTGTAGAACTAGATGGGAGGATCGCCATTCG +
Preference number: 4 (lower is better)
Translates to: YLHQGTSERKMS*ECRTRWEDRHS
Trigger: CGAATGGCGATCCTCCCATCTAGTTCTACACTCCAAACTCATTTTGCGTTCTGAAGTTCCTTGGTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GTCAACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTTTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: VNWSIRRSWASALNCCSIFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...AATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTTGAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGCTCACCAAATTAATATaGTCACCTTGCCTACTTGAG +
Preference number: 4 (lower is better)
Translates to: QQTKVVFPIDDRTYGQLLLTKLI*SPCLLE
Trigger: CTCAAGTAGGCAAGGTGATCATATTAATTTGGTGAG...CAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR TCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTGATTGCCATCAAAGGTaGTGTCCGAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTDCHQR*CPRGKK
Trigger: CTTCTTCCCTCTCGGACATCACCTTTGATGGCAATC...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGCCTTTCTTCTTCCGTaGTTCTCTTCATATCTAGCT +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEAFLLP*FSSYLA
Trigger: AGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGC...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAAGCAAAGATTGTTTATaGCTTTCCCGCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKSKDCL*LSRFFS
Trigger: AGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCT...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGCAAAGATTGTTTATaGCTTTCCCGCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARSKDCL*LSRFFS
Trigger: AGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCT...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCCTTGTAAAGCATTGTTaGGTCCTGAGTCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFLVKHC*VLSLEA
Trigger: GGCCTCTAGACTCAGGACTCAACAATGCTTTACAAG...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTACAACTGGATTTCCTTaGGGATCAATTGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVTTGFP*GSIVNW
Trigger: CCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGT...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAACAACTGGATTTCCTTaGGGATCAATTGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKATTGFP*GSIVNW
Trigger: CCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGT...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAACAACTGGATTTCCTTaGGGATCAATTGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKTTGFP*GSIVNW
Trigger: CCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTAGATGCAGCTCATGCTaGATCATCAGCAAATACTAC +
Preference number: 4 (lower is better)
Translates to: FFPNRRTRRHLRVESPLIRCSSC*IISKYY
Trigger: GTAGTATTTGCTGATGATTCAGCATGAGCTGCATCT...AATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTCATCCTCCATATAGGTaGATAGCAGGAACCGTACCT +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSHPPYR*IAGTVP
Trigger: AGGTACGGTTCCTGCTATTCACCTATATGGAGGATG...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCCTCCTGTGGTTCCCTaGGAATGCATTCCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIPPVVP*ECIPRR
Trigger: TCTTCTAGGAATGCATTCTCAGGGAACCACAGGAGG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCTAAGATTGTTTTTCTaGAGTGGCATCATCTCTAGC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRLRLFF*SGIISS
Trigger: GCTAGAGATGATGCCACTTCAGAAAAACAATCTTAG...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACCCTTGTGGCCATCATTaGCTACTGTTTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNPCGHH*LLFLIL
Trigger: GAGTATGAGAAACAGTAGTCAATGATGGCCACAAGG...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAACCTTGTGGCCATCATTaGCTACTGTTTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQPCGHH*LLFLIL
Trigger: GAGTATGAGAAACAGTAGTCAATGATGGCCACAAGG...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTTCATGCTGTTATGTGTaGACTCTGCCCTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: NKRRWSSPLMIGHTVSFCSCCYV*TLPFTL
Trigger: TAAAGTGAAGGGCAGAGTTCACACATAACAGCATGA...ACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558204.5
CDS-3UTR GCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCGCTACTCGTTGTTGTTaGAAGTCCCACTGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIATRCC*KSHCRA
Trigger: AGCTCGACAGTGGGACTTGCAACAACAACGAGTAGC...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTCCATTTATTTTCTaGATACTGAAATGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTVPFIF*ILKWLS
Trigger: GCTAAGCCATTTCAGTATGCAGAAAATAAATGGAAC...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTAGTAGATACCGAAATTaGTTTTTCCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVSRYRN*FFLASP
Trigger: GGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACT...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGATGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATG +
Preference number: 4 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRCGQSF*KASFFM
Trigger: CATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACA...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGCGAATTTCTATGACTaGATCCCTAACAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARANFYD*IPNKLN
Trigger: ATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGATTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTGAACCAAGGATGCAGTaGCACGCCATCTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTEPRMQ*HAISEN
Trigger: GTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTC...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAATCTTACGAAGTGTGTaGTATCAGGAGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKILRSV*YQEETE
Trigger: CTCAGTTTCCTCCTGATAGCACACACTTCGTAAGAT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCAAACGTATTGGGTGTTTaGTGTGTGCCAGGCATGATG +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIANVLGV*CVPGMM
Trigger: CATCATGCCTGGCACACAGCAAACACCCAATACGTT...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAGAATATGAATCCCAGTaGATTCCTTGCCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQEYESQ*IPCPIR
Trigger: CCTGATTGGGCAAGGAATGCACTGGGATTCATATTC...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATTCAACAAACGAAGGTaGTCTTCCCCATTGATGATA +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKFNKRR*SSPLMI
Trigger: TATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGCTGAGAAAGAGATGTTaGAGGCAGGGCAAATTATCC +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWLRKRC*RQGKLS
Trigger: GGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAG...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAACTCTTCATATCTAGCTaGCGCAGCTGCATCATATTC +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQLFISS*RSCIIF
Trigger: GAATATGATGCAGCTGCGCCAGCTAGATATGAAGAG...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGTCAATACGACGGAGTTaGGCTAGTGCGTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWSIRRS*ASALNC
Trigger: GCAATTTAACGCACTAGCCCAACTCCGTCGTATTGA...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp GTCAACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTTTCTGCATACTGAAATaGCTTAGCCTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: VNWSIRRSWASALNCCSIFCILK*LSLNST
Trigger: TGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAA...AATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAGAAATCAGACGATACTaGGGTAACTCAGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKAEIRRY*GNSEDA
Trigger: AGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTC...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGAAATTGCTTTTTCCTaGCATCACCCAGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKAREIAFS*HHPEWK
Trigger: TTTCCATTCTGGGTGATGCCAGGAAAAAGCAATTTC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAATTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACGCATTCCTAGAAGAATaGGGCATCCTCCATATAGGT +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNAFLEE*GILHIG
Trigger: ACCTATATGGAGGATGCCCCATTCTTCTAGGAATGC...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAGTTAAGCACGCCTTTTaGGAGAAGAGTAATCAAGAG +
Preference number: 4 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRVKHAF*EKSNQE
Trigger: CTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAAC...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGCAGACAATATACTCTTaGTTCTCCTCTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMQTIYS*FSSQHH
Trigger: GTGATGTTGAGAGGAGAACCAAGAGTATATTGTCTG...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTACCTTGTCTTTTTATCTaGGGATTATCTTCACCAAGG +
Preference number: 4 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLPCLFI*GLSSPR
Trigger: CCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGG...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGTTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp GTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: VFPQQKDTKTSQSRKPTNFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...ATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000559670.5
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGACTCACCAAATTAATATaGTCACCTTGCCTACTTGAG +
Preference number: 4 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRLTKLI*SPCLLE
Trigger: CTCAAGTAGGCAAGGTGATCATATTAATTTGGTGAG...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKSSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCACTCACGAAAGTGATTTaGTTGTGTCGCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKALTKVI*LCRKLS
Trigger: ACTTAACTTGCGACACAATCAAATCACTTTCGTGAG...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTGATTGCCATCAAAGGTaGTGTCCGAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFDCHQR*CPRGKK
Trigger: CTTCTTCCCTCTCGGACATCACCTTTGATGGCAATC...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTTGTACCATGACTCTTaGGCTATGGGATTGCCATCA +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENLYHDS*AMGLPS
Trigger: TGATGGCAATCCCATAGCTCAAGAGTCATGGTACAA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACAGTGTGTTTGTACCATaGCTCTTGAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNSVFVP*LLSYGI
Trigger: AATCCCATAGCTCAAGAGTCATGGTACAAACACACT...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGGCCTTTCTTCTTCCGTaGTTCTCTTCATATCTAGCT +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWAFLLP*FSSYLA
Trigger: AGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGC...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTAGCAAAGATTGTTTATaGCTTTCCCGCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVSKDCL*LSRFFS
Trigger: AGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCT...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTACTTGTAAAGCATTGTTaGGTCCTGAGTCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLLVKHC*VLSLEA
Trigger: GGCCTCTAGACTCAGGACTCAACAATGCTTTACAAG...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTACAAGGTATGTGTCTATaGCAGATAAACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLQGMCL*QINLVK
Trigger: CTTTACAAGGTTTATCTGTCATAGACACATACCTTG...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGCAAGGTATGTGTCTATaGCAGATAAACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKQGMCL*QINLVK
Trigger: CTTTACAAGGTTTATCTGTCATAGACACATACCTTG...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGACAAGGTATGTGTCTATaGCAGATAAACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARQGMCL*QINLVK
Trigger: CTTTACAAGGTTTATCTGTCATAGACACATACCTTG...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAACAAGGTATGTGTCTATaGCAGATAAACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKQGMCL*QINLVK
Trigger: CTTTACAAGGTTTATCTGTCATAGACACATACCTTG...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATTCCTATCCCAGTTTTaGCTCATTTGCATATTCTCT +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKFLSQF*LICIFS
Trigger: AGAGAATATGCAAATGAGTCAAAACTGGGATAGGAA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTTACACACTAGTAAGCTaGTGGCCTAAGTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSYTLVS*WPKCQD
Trigger: ATCTTGGCACTTAGGCCATCAGCTTACTAGTGTGTA...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCGGCCAAGAAAGCATGTaGGTGTCAAGTCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIGQESM*VSSLFS
Trigger: GCTAAAGAGACTTGACACTCACATGCTTTCTTGGCC...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGATCATTGAAGAGAATATaGATCCCAGTGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRSLKRI*IPVHSL
Trigger: CAAGGAATGCACTGGGATTCATATTCTCTTCAATGA...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGACATAATGACAAAACATaGAAGTGGATTAGGAACGAC +
Preference number: 4 (lower is better)
Translates to: HQQILRALGYSRAPIKARHNDKT*KWIRND
Trigger: GTCGTTCCTAATCCACTTTCATGTTTTGTCATTATG...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCACATCTCAACATATGCTaGGATGTGTGGTATATCTTG +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKAHLNIC*DVWYIL
Trigger: CAAGATATACCACACATCTCAGCATATGTTGAGATG...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACCTGAATCATGTTGTGTCTTaGGACATAGTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SPLMIGHTVSFCLSRLNLNHVVS*DIVCRK
Trigger: CTTTCTACACACTATGTCTCAAGACACAACATGATT...CAGGTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR TCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAATTTGTCTTGCCTACTTaGGTAGTTTCTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEFVLPT*VVSFKV
Trigger: GACCTTGAAAGAAACTACTCAAGTAGGCAAGACAAA...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560107.6
CDS-3UTR GCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATGTTGTGATCATTCCTaGTGTTTGAACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKCCDHS*CLNTPI
Trigger: AATTGGAGTGTTCAAACAGCAGGAATGATCACAACA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCTGTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: SVFPQQKDTKTSQSRKPTSALNC*SITRFV
Trigger: AACAAATCTTGTAATGCTGCAGCAATTTAACGCACT...AGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKASALN*CSITRF
Trigger: AAATCTTGTAATGCTGCAGCAATTTAACGCACTAGC...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAAGTAGATACCGAAATTaGTTTTTCCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQSRYRN*FFLASP
Trigger: GGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACT...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTGCGAATTTCTATGACTaGATCCCTAACAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVANFYD*IPNKLN
Trigger: ATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGCGAATTTCTATGACTaGATCCCTAACAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEANFYD*IPNKLN
Trigger: ATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAATTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCATTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKAFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGAGACACAGGTACACATaGATGTCTATTAAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKRHRYT*MSIKRA
Trigger: TGCTCTTTTAATAGACATGCATGTGTACCTGTGTCT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAAAGAACCCTTCACTCATaGATCCCTAATACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQRTLHS*IPNTSE
Trigger: CTCAGAAGTATTAGGGATGCATGAGTGAAGGGTTCT...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTTACATCTTTCCAATCTaGCAGAATCCCACAGACAAT +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVYIFPI*QNPTDN
Trigger: ATTGTCTGTGGGATTCTGGCAGATTGGAAAGATGTA...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTAAAAGATTGCACTGTCTTACATaGCAGGCCTTCAGTGGAATG +
Preference number: 4 (lower is better)
Translates to: HASLILLRHRYTCMSIKRLHCLT*QAFSGM
Trigger: CATTCCACTGAAGGCCTGGCATGTAAGACAGTGCAA...TCTTTTAATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTTCCCAGTGCATTCCTTaGCCAATCAGGAATAGATCA +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSSQCIP*PIRNRS
Trigger: TGATCTATTCCTGATTGGGCAAGGAATGCACTGGGA...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGTTTTCATCCTCTCTATaGCTCAGTTTTCTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKFSSSL*LSFLVF
Trigger: GAACACTAGAAAACTGAGGCATAGAGAGGATGAAAA...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGTTTTCATCCTCTCTATaGCTCAGTTTTCTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRFSSSL*LSFLVF
Trigger: GAACACTAGAAAACTGAGGCATAGAGAGGATGAAAA...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAAATTTGTATCCCTCTaGTTGTGTCCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFKFVSL*LCPLAP
Trigger: AGGAGCCAGTGGACACAAGCAGAGGGATACAAATTT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCCTGAGAAAGAGATGTTaGAGGCAGGGCAAATTATCC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFLRKRC*RQGKLS
Trigger: GGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAG...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCTCTTCATATCTAGCTaGCGCAGCTGCATCATATTC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENLFISS*RSCIIF
Trigger: GAATATGATGCAGCTGCGCCAGCTAGATATGAAGAG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTCAATACGACGGAGTTaGGCTAGTGCGTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSIRRS*ASALNC
Trigger: GCAATTTAACGCACTAGCCCAACTCCGTCGTATTGA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGGATCAATTGTCAACTaGTCAATACGACGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENGSIVN*SIRRSW
Trigger: CCAACTCCGTCGTATTGACCAGTTGACAATTGATCC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGAAATTGCTTTTTCCTaGCATCACCCAGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKEIAFS*HHPEWK
Trigger: TTTCCATTCTGGGTGATGCCAGGAAAAAGCAATTTC...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENLNEHL*PKLLQS
Trigger: GCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TCATGTTGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTGCTCAGGGTTACCATaGAAACGACCATTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SCCKSLPGNDDVSLFSLNCSGLP*KRPFPV
Trigger: GACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCA...ATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR CCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAAATCTACAAGCTCCTTaGGTGATGGACCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQENLQAP*VMDLIL
Trigger: TAAAATGAGGTCCATCACCCAAGGAGCTTGTAGATT...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACATCACTGATTTCTACTaGACAGTGAGCTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENITDFY*TVSSTL
Trigger: GAGAGTGGAGCTCACTGTCCAGTAGAAATCAGTGAT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560158.6
3UTR CAA 72 bp GCCATCTCTGAAAACTGTTTAGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAATTAATCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AISENCLVPKGC*VLTYRQLILPF
Trigger: GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGAGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAATTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: LNHQQILRALGYSRAPIKFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTTTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: NKRRWSSPLMIGHTVSFCFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...ACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000558204.5
ENST00000559201.5
ENST00000561081.5
CDS-3UTR TCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTATCACCTTGCCTACTTaGGTAGTTTCTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSITLPT*VVSFKV
Trigger: GACCTTGAAAGAAACTACTCAAGTAGGCAAGGTGAT...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACATCACCTTGCCTACTTaGGTAGTTTCTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENITLPT*VVSFKV
Trigger: GACCTTGAAAGAAACTACTCAAGTAGGCAAGGTGAT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260382.10
ENST00000544974.6
ENST00000560369.5
CDS-3UTR TCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACCTCACGAAAGTGATTTaGTTGTGTCGCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNLTKVI*LCRKLS
Trigger: ACTTAACTTGCGACACAATCAAATCACTTTCGTGAG...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTCATCTCTCACGAAAGTaGTTTGATTGTGTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSHLSRK*FDCVAS
Trigger: ACTTGCGACACAATCAAATCACTTTCGTGAGAGATG...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCCATCTCTCACGAAAGTaGTTTGATTGTGTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFHLSRK*FDCVAS
Trigger: ACTTGCGACACAATCAAATCACTTTCGTGAGAGATG...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTATTGTACCATGACTCTTaGGCTATGGGATTGCCATCA +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLLYHDS*AMGLPS
Trigger: TGATGGCAATCCCATAGCTCAAGAGTCATGGTACAA...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAGTGTGTTTGTACCATaGCTCTTGAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSVFVP*LLSYGI
Trigger: AATCCCATAGCTCAAGAGTCATGGTACAAACACACT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAGCTGCATCATATTCTaGAGGACAGTGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSCIIF*RTVCLY
Trigger: GTACAAACACACTGTCCTTCAGAATATGATGCAGCT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGCCTTTCTTCTTCCGTaGTTCTCTTCATATCTAGCT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENAFLLP*FSSYLA
Trigger: AGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp AAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCAATCTGGTTAGCAAAGATTGTTTATaGCTTTCCCGCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KDTKTSQSRKPTNFFNLVSKDCL*LSRFFS
Trigger: AGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCT...AACCAGATTGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACACAACTGGATTTCCTTaGGGATCAATTGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENTTGFP*GSIVNW
Trigger: CCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCACAACTGGATTTCCTTaGGGATCAATTGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFTTGFP*GSIVNW
Trigger: CCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCAAGATGCAGCTCATGCTaGATCATCAGCAAATACTAC +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIARCSSC*IISKYY
Trigger: GTAGTATTTGCTGATGATTCAGCATGAGCTGCATCT...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAACTTCAGAACGCAAAATaGGTTTGGAGTGTAGAACTA +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQLQNAK*VWSVEL
Trigger: TAGTTCTACACTCCAAACTCATTTTGCGTTCTGAAG...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAATCATTGAAGAGAATATaGATCCCAGTGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQSLKRI*IPVHSL
Trigger: CAAGGAATGCACTGGGATTCATATTCTCTTCAATGA...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTAATCATGTTGTGTCTTaGGACATAGTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: FNKRRWSSPLMIGHTVSFNHVVS*DIVCRK
Trigger: CTTTCTACACACTATGTCTCAAGACACAACATGATT...AAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558204.5
ENST00000559201.5
CDS-3UTR GCA 90 bp ATTTTTGGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGCTACTCGTTGTTGTTaGAAGTCCCACTGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: IFGLLSAVGRASYRNFYCATRCC*KSHCRA
Trigger: AGCTCGACAGTGGGACTTGCAACAACAACGAGTAGC...GCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATTGTTTCCTCTGGGAATaGAGAGAGGGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SYKIVLKVQQTKVVFPIDCFLWE*REGASI
Trigger: GATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACA...ATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCATGTTGTGATCATTCCTaGTGTTTGAACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKACCDHS*CLNTPI
Trigger: AATTGGAGTGTTCAAACAGCAGGAATGATCACAACA...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRSALNC*SITRFV
Trigger: AACAAATCTTGTAATGCTGCAGCAATTTAACGCACT...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: QILRALGYSRAPIKARTKSALNC*SITRFV
Trigger: AACAAATCTTGTAATGCTGCAGCAATTTAACGCACT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEASALN*CSITRF
Trigger: AAATCTTGTAATGCTGCAGCAATTTAACGCACTAGC...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: SKQEPRMQCHAISENCLVASALN*CSITRF
Trigger: AAATCTTGTAATGCTGCAGCAATTTAACGCACTAGC...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAGTTCCATTTATTTTCTaGATACTGAAATGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKVPFIF*ILKWLS
Trigger: GCTAAGCCATTTCAGTATGCAGAAAATAAATGGAAC...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAGTAGATACCGAAATTaGTTTTTCCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSRYRN*FFLASP
Trigger: GGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAGTAGATACCGAAATTaGTTTTTCCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSRYRN*FFLASP
Trigger: GGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCATGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATG +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIACGQSF*KASFFM
Trigger: CATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACA...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATG +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFCGQSF*KASFFM
Trigger: CATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATG +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENCGQSF*KASFFM
Trigger: CATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGTTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAAGACACAGGTACACATaGATGTCTATTAAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQERHRYT*MSIKRA
Trigger: TGCTCTTTTAATAGACATGCATGTGTACCTGTGTCT...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAAGGCATGATGAGAAATaGTTTACATGCATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKRHDEK*FTCIVS
Trigger: AGAAACAATGCATGTAAAGCATTTCTCATCATGCCT...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTATCCCAGTGCATTCCTTaGCCAATCAGGAATAGATCA +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLSQCIP*PIRNRS
Trigger: TGATCTATTCCTGATTGGGCAAGGAATGCACTGGGA...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTGAATATGAATCCCAGTaGATTCCTTGCCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTEYESQ*IPCPIR
Trigger: CCTGATTGGGCAAGGAATGCACTGGGATTCATATTC...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCACACCTACTTAACACCTaGACTTGGATATTTAACAAC +
Preference number: 4 (lower is better)
Translates to: NHQQILRALGYSRAPIKAHLLNT*TWIFNN
Trigger: GTTGTTAAATATCCAAGTGCAGGTGTTAAGTAGGTG...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp AAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGAAATTTGTATCCCTCTaGTTGTGTCCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KIVLKVQQTKVVFPIDDRKFVSL*LCPLAP
Trigger: AGGAGCCAGTGGACACAAGCAGAGGGATACAAATTT...CCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CCA 90 bp CCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAACCCTTCTTCATGCTTTCAACAAACGAAGGTaGTCTTCCCCATTGATGATA +
Preference number: 4 (lower is better)
Translates to: PGNDDVSLFSLNSTLLHAFNKRR*SSPLMI
Trigger: TATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA...AGCATGAAGAAGGGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558204.5
CDS-3UTR CCA 90 bp AAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGCTCTTCATATCTAGCTaGCGCAGCTGCATCATATTC +
Preference number: 4 (lower is better)
Translates to: KIVLKVQQTKVVFPIDDRLFISS*RSCIIF
Trigger: GAATATGATGCAGCTGCGCCAGCTAGATATGAAGAG...CCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: QEPRMQCHAISENCLVPKSLGST*TISSNS
Trigger: AGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACT...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRSLGST*TISSNS
Trigger: AGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACT...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp ACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: TKVVFPIDDRTYGQLLSFSLGST*TISSNS
Trigger: AGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACT...GAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR CCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCTCAATACGACGGAGTTaGGCTAGTGCGTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLISIRRS*ASALNC
Trigger: GCAATTTAACGCACTAGCCCAACTCCGTCGTATTGA...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTATCAATACGACGGAGTTaGGCTAGTGCGTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLSIRRS*ASALNC
Trigger: GCAATTTAACGCACTAGCCCAACTCCGTCGTATTGA...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTAAAAGAGGATCAATTGTCAACTaGTCAATACGACGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: HASLILLRHRYTCMSIKRGSIVN*SIRRSW
Trigger: CCAACTCCGTCGTATTGACCAGTTGACAATTGATCC...TCTTTTAATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGATTCTGCATACTGAAATaGCTTAGCCTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRFCILK*LSLNST
Trigger: TGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAA...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAATTCTGCATACTGAAATaGCTTAGCCTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEFCILK*LSLNST
Trigger: TGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAA...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTGAAATCAGACGATACTaGGGTAACTCAGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: FTHASLILLRHRYTCMSIEIRRY*GNSEDA
Trigger: AGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTC...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGAAATCAGACGATACTaGGGTAACTCAGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENEIRRY*GNSEDA
Trigger: AGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp CCGAGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTCTCAATGAACATCTGTaGCCAAAGCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PSYKIVLKVQQTKVVFPILNEHL*PKLLQS
Trigger: GCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAG...AATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCATTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIAFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACACATCACCTTCAAGCTaGGATCTCATTTCTATACCA +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNTSPSS*DLISIP
Trigger: TGGTATAGAAATGAGATCCCAGCTTGAAGGTGATGT...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAACAGACAATATACTCTTaGTTCTCCTCTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQQTIYS*FSSQHH
Trigger: GTGATGTTGAGAGGAGAACCAAGAGTATATTGTCTG...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGCCTTGTCTTTTTATCTaGGGATTATCTTCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWPCLFI*GLSSPR
Trigger: CCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGG...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGAAGCCAAAAACCTTGTaGCCATCATTGACTACTGTT +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWKPKTL*PSLTTV
Trigger: AACAGTAGTCAATGATGGCCACAAGGTTTTTGGCTT...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAACCCTTCTTCATGCTAATCTACAAGCTCCTTaGGTGATGGACCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: PGNDDVSLFSLNSTLLHANLQAP*VMDLIL
Trigger: TAAAATGAGGTCCATCACCCAAGGAGCTTGTAGATT...AGCATGAAGAAGGGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558032.5
CDS-3UTR CCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACCAGTTCACCTCAGCTTaGCAATCCATCTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNQFTSA*QSIFKS
Trigger: ACTTTTAAAGATGGATTGCCAAGCTGAGGTGAACTG...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR TCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACTTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCCTCACCAAATTAATATaGTCACCTTGCCTACTTGAG +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFLTKLI*SPCLLE
Trigger: CTCAAGTAGGCAAGGTGATCATATTAATTTGGTGAG...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260382.10
ENST00000544974.6
ENST00000560369.5
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCTCACGAAAGTGATTTaGTTGTGTCGCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENLTKVI*LCRKLS
Trigger: ACTTAACTTGCGACACAATCAAATCACTTTCGTGAG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCATCTCTCACGAAAGTaGTTTGATTGTGTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIHLSRK*FDCVAS
Trigger: ACTTGCGACACAATCAAATCACTTTCGTGAGAGATG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGCATCTCTCACGAAAGTaGTTTGATTGTGTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: KIVLKVQQTKVVFPIDDRHLSRK*FDCVAS
Trigger: ACTTGCGACACAATCAAATCACTTTCGTGAGAGATG...CCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAAGTGTGTTTGTACCATaGCTCTTGAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLSVFVP*LLSYGI
Trigger: AATCCCATAGCTCAAGAGTCATGGTACAAACACACT...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTAGCTGCATCATATTCTaGAGGACAGTGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTSCIIF*RTVCLY
Trigger: GTACAAACACACTGTCCTTCAGAATATGATGCAGCT...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCAGCTGCATCATATTCTaGAGGACAGTGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLISCIIF*RTVCLY
Trigger: GTACAAACACACTGTCCTTCAGAATATGATGCAGCT...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAGCCTTTCTTCTTCCGTaGTTCTCTTCATATCTAGCT +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLAFLLP*FSSYLA
Trigger: AGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGC...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAGCAAAGATTGTTTATaGCTTTCCCGCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSKDCL*LSRFFS
Trigger: AGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp AAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACAACTGGATTTCCTTaGGGATCAATTGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: KIVLKVQQTKVVFPIDDRTTGFP*GSIVNW
Trigger: CCAGTTGACAATTGATCCTCAAGGAAATCCAGTTGT...CCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACTTCCTATCCCAGTTTTaGCTCATTTGCATATTCTCT +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNFLSQF*LICIFS
Trigger: AGAGAATATGCAAATGAGTCAAAACTGGGATAGGAA...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCCTTCAGAACGCAAAATaGGTTTGGAGTGTAGAACTA +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFLQNAK*VWSVEL
Trigger: TAGTTCTACACTCCAAACTCATTTTGCGTTCTGAAG...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAACCTCATGCTGTTATGTGTaGACTCTGCCCTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: CKSLPGNDDVSLFSLNSTSCCYV*TLPFTL
Trigger: TAAAGTGAAGGGCAGAGTTCACACATAACAGCATGA...GGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558032.5
ENST00000558204.5
CDS-3UTR GCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGTGTTGTGATCATTCCTaGTGTTTGAACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWCCDHS*CLNTPI
Trigger: AATTGGAGTGTTCAAACAGCAGGAATGATCACAACA...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp GTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACTGTTGTGATCATTCCTaGTGTTTGAACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: VLKVQQTKVVFPIDDRTYCCDHS*CLNTPI
Trigger: AATTGGAGTGTTCAAACAGCAGGAATGATCACAACA...GTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWASALN*CSITRF
Trigger: AAATCTTGTAATGCTGCAGCAATTTAACGCACTAGC...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp GTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: VLKVQQTKVVFPIDDRTYASALN*CSITRF
Trigger: AAATCTTGTAATGCTGCAGCAATTTAACGCACTAGC...GTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCAGTAGATACCGAAATTaGTTTTTCCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLISRYRN*FFLASP
Trigger: GGGTGATGCCAGGAAAAAGCAATTTCGGTATCTACT...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGTGTGGCCAAAGCTTCTaGAAAGCCTCATTTTTCATG +
Preference number: 4 (lower is better)
Translates to: KIVLKVQQTKVVFPIDDRCGQSF*KASFFM
Trigger: CATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACA...CCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGCGAATTTCTATGACTaGATCCCTAACAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENANFYD*IPNKLN
Trigger: ATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp CATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTAAAAGAATCTTACGAAGTGTGTaGTATCAGGAGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: HASLILLRHRYTCMSIKRILRSV*YQEETE
Trigger: CTCAGTTTCCTCCTGATAGCACACACTTCGTAAGAT...TCTTTTAATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAAGGCATGATGAGAAATaGTTTACATGCATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQERHDEK*FTCIVS
Trigger: AGAAACAATGCATGTAAAGCATTTCTCATCATGCCT...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTTACATCTTTCCAATCTaGCAGAATCCCACAGACAAT +
Preference number: 4 (lower is better)
Translates to: FTHASLILLRHRYTCMSIYIFPI*QNPTDN
Trigger: ATTGTCTGTGGGATTCTGGCAGATTGGAAAGATGTA...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTTCAGACTATGGGATTTaGATCTCTTCCCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFSDYGI*ISSPSL
Trigger: CAGGGAAGGGGAAGAGATGCAAATCCCATAGTCTGA...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTTTGCACTGTCTTACATaGCAGGCCTTCAGTGGAATG +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFLHCLT*QAFSGM
Trigger: CATTCCACTGAAGGCCTGGCATGTAAGACAGTGCAA...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGTTCTCTACACATTATTaGAATGAATCCAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWFSTHY*NESSCQ
Trigger: TTGGCAGCTGGATTCATTGCAATAATGTGTAGAGAA...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTTTCAACAAACGAAGGTaGTCTTCCCCATTGATGATA +
Preference number: 4 (lower is better)
Translates to: FTHASLILLRHRYTCMSIFNKRR*SSPLMI
Trigger: TATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTTTCAACAAACGAAGGTaGTCTTCCCCATTGATGATA +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSFNKRR*SSPLMI
Trigger: TATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGAAATTGCTTTTTCCTaGCATCACCCAGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFEIAFS*HHPEWK
Trigger: TTTCCATTCTGGGTGATGCCAGGAAAAAGCAATTTC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp GGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGAATTTAAATACTACGTGCTTTaGGCTATAGCAGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: GLLSAVGRASYRNFYCEFKYYVL*AIAGHQ
Trigger: TTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT...AAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAAGCCAAAAACCTTGTaGCCATCATTGACTACTGTT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFKPKTL*PSLTTV
Trigger: AACAGTAGTCAATGATGGCCACAAGGTTTTTGGCTT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACCTTAACACCTGCACTTaGATATTTAACAACCATCTC +
Preference number: 4 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNLNTCT*IFNNHL
Trigger: GAGATGGTTGTTAAATATCCAAGTGCAGGTGTTAAG...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CAA 72 bp ACTCGTTGTTGTTGCAAGTCCCACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTCTTCTCCTTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: TRCCCKSHCRAT*LIVNLFFSLSK
Trigger: TTTGCTTAAGGAGAAGAAAAGGTTAACAATTAACAACGTAGCTCGACAGTGGGACTTGCAACAACAACGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CAA 72 bp ATCTTCATTTGTAGCAATATTGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGCTACGTTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: IFICSNIGYSLL*QVPLSSYVVNC
Trigger: ACAATTAACAACGTAGCTCGACAGTGGGACTTGCAACAACAACGAGTAGCCAATATTGCTACAAATGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CAA 72 bp TCTATCTTCATTTGTAGCAATATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCGAGCTACGTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: SIFICSNIGYSL*LQVPLSSYVVN
Trigger: ATTAACAACGTAGCTCGACAGTGGGACTTGCAACAACAACGAGTAGCCAATATTGCTACAAATGAAGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CAA 72 bp TTTTCTATCTTCATTTGTAGCAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTGTCGAGCTACGTTGTT +
Preference number: 4 (lower is better)
Translates to: FSIFICSNIGYS*LLQVPLSSYVV
Trigger: AACAACGTAGCTCGACAGTGGGACTTGCAACAACAACGAGTAGCCAATATTGCTACAAATGAAGATAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
3UTR CAA 72 bp GAGTCAGAATCTTTTCTATCTTCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGCAAGTCCCACTGTCGA +
Preference number: 4 (lower is better)
Translates to: ESESFLSSFVAI*ATRCCCKSHCR
Trigger: TCGACAGTGGGACTTGCAACAACAACGAGTAGCCAATATTGCTACAAATGAAGATAGAAAAGATTCTGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp TTTCAAGGTCATGTTGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAATCACCTTGCCTACTTaGGTAGTTTCTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FQGHVVKVYRGMTMCLYLITLPT*VVSFKV
Trigger: GACCTTGAAAGAAACTACTCAAGTAGGCAAGGTGAT...TAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACAACATGACCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR TCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTACTCACCAAATTAATATaGTCACCTTGCCTACTTGAG +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLLTKLI*SPCLLE
Trigger: CTCAAGTAGGCAAGGTGATCATATTAATTTGGTGAG...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTTCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: FTHASLILLRHRYTCMSISSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCATCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIASSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp GATGCTACATGTGCTAGGATTCCAAAGAGCCTTTCAGCCATTATCATATCATTCTCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: DATCARIPKSLSAIIISFSSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...GAATGATATGATAATGGCTGAAAGGCTCTTTGGAATCCTAGCACATGTAGCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR TCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAAGCAAAGATTGTTTATaGCTTTCCCGCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLSKDCL*LSRFFS
Trigger: AGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCT...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCAAGGTATGTGTCTATaGCAGATAAACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENQGMCL*QINLVK
Trigger: CTTTACAAGGTTTATCTGTCATAGACACATACCTTG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR TCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTTACACACTAGTAAGCTaGTGGCCTAAGTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFYTLVS*WPKCQD
Trigger: ATCTTGGCACTTAGGCCATCAGCTTACTAGTGTGTA...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTGTTTACTAGCCAGATaGGAAATGGTCCATATGTTT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFCLLAR*EMVHMF
Trigger: AAACATATGGACCATTTCTCATCTGGCTAGTAAACA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTTGTTTACTAGCCAGATaGGAAATGGTCCATATGTTT +
Preference number: 4 (lower is better)
Translates to: FTHASLILLRHRYTCMSICLLAR*EMVHMF
Trigger: AAACATATGGACCATTTCTCATCTGGCTAGTAAACA...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCATCTCAACATATGCTaGGATGTGTGGTATATCTTG +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIHLNIC*DVWYIL
Trigger: CAAGATATACCACACATCTCAGCATATGTTGAGATG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAACCAGCTTGAATTCAACCTaGATTGTGATGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: CKSLPGNDDVSLFSLNSTSLNST*IVMVRG
Trigger: ACCTCTAACCATCACAATTCAGGTTGAATTCAAGCT...GGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTGTTGTGATCATTCCTaGTGTTTGAACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENCCDHS*CLNTPI
Trigger: AATTGGAGTGTTCAAACAGCAGGAATGATCACAACA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTGTTGTGATCATTCCTaGTGTTTGAACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFCCDHS*CLNTPI
Trigger: AATTGGAGTGTTCAAACAGCAGGAATGATCACAACA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSASALN*CSITRF
Trigger: AAATCTTGTAATGCTGCAGCAATTTAACGCACTAGC...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGCTAGTGCGTTAAATTaGTGCAGCATTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENASALN*CSITRF
Trigger: AAATCTTGTAATGCTGCAGCAATTTAACGCACTAGC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp CCGAGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGCGAATTTCTATGACTaGATCCCTAACAAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: PSYKIVLKVQQTKVVFPIANFYD*IPNKLN
Trigger: ATTGAGCTTGTTAGGGATGCAGTCATAGAAATTCGC...AATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTATTTTGGTCTGTTATCTaGTGTAGGCAGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLFWSVI*CRQSFI
Trigger: TATGAAGCTCTGCCTACAGCAGATAACAGACCAAAA...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTCACCTACTTAACACCTaGACTTGGATATTTAACAAC +
Preference number: 4 (lower is better)
Translates to: FTHASLILLRHRYTCMSIHLLNT*TWIFNN
Trigger: GTTGTTAAATATCCAAGTGCAGGTGTTAAGTAGGTG...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp GTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: VLKVQQTKVVFPIDDRTYSLGST*TISSNS
Trigger: AGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACT...GTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp ATTTTTGGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGGATCAATTGTCAACTaGTCAATACGACGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: IFGLLSAVGRASYRNFYCGSIVN*SIRRSW
Trigger: CCAACTCCGTCGTATTGACCAGTTGACAATTGATCC...GCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTTCTGCATACTGAAATaGCTTAGCCTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFFCILK*LSLNST
Trigger: TGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTTCTGCATACTGAAATaGCTTAGCCTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENFCILK*LSLNST
Trigger: TGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCGAAATTGCTTTTTCCTaGCATCACCCAGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIEIAFS*HHPEWK
Trigger: TTTCCATTCTGGGTGATGCCAGGAAAAAGCAATTTC...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAACATCACCTTCAAGCTaGGATCTCATTTCTATACCA +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLTSPSS*DLISIP
Trigger: TGGTATAGAAATGAGATCCCAGCTTGAAGGTGATGT...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp AGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATAGCTGCATCATATTCTaGAGGACAGTGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SYKIVLKVQQTKVVFPIDSCIIF*RTVCLY
Trigger: GTACAAACACACTGTCCTTCAGAATATGATGCAGCT...ATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTGCCTTTCTTCTTCCGTaGTTCTCTTCATATCTAGCT +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFAFLLP*FSSYLA
Trigger: AGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGC...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GCGTTAAATTGCTGCAGCATTACAAGATTTGTTTCCTTGAATTTAAGGTGCAGAAGCAAAGATTGTTTATaGCTTTCCCGCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALNCCSITRFVSLNLRCRSKDCL*LSRFFS
Trigger: AGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCT...TCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR TCA 90 bp CATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTAAAAGACAAGGTATGTGTCTATaGCAGATAAACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: HASLILLRHRYTCMSIKRQGMCL*QINLVK
Trigger: CTTTACAAGGTTTATCTGTCATAGACACATACCTTG...TCTTTTAATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCAAGGTATGTGTCTATaGCAGATAAACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIQGMCL*QINLVK
Trigger: CTTTACAAGGTTTATCTGTCATAGACACATACCTTG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR TCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCATAATGACAAAACATaGAAGTGGATTAGGAACGAC +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIHNDKT*KWIRND
Trigger: GTCGTTCCTAATCCACTTTCATGTTTTGTCATTATG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAACCAATCATGTTGTGTCTTaGGACATAGTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: CKSLPGNDDVSLFSLNSTNHVVS*DIVCRK
Trigger: CTTTCTACACACTATGTCTCAAGACACAACATGATT...GGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558032.5
ENST00000558204.5
ENST00000559201.5
CDS-3UTR TCA 90 bp TGTTGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAATTCAACCTGAATTGTaGTGGTTAGAGGTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: CCKSLPGNDDVSLFSLNSIQPEL*WLEVSN
Trigger: GTTGGAAACCTCTAACCATCACAATTCAGGTTGAAT...TGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR GCA 90 bp GAAGATGCTACATGTGCTAGGATTCCAAAGAGCCTTTCAGCCATTATCATATCAAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: EDATCARIPKSLSAIIISSALNC*SITRFV
Trigger: AACAAATCTTGTAATGCTGCAGCAATTTAACGCACT...TGATATGATAATGGCTGAAAGGCTCTTTGGAATCCTAGCACATGTAGCATCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSALNC*SITRFV
Trigger: AACAAATCTTGTAATGCTGCAGCAATTTAACGCACT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCAGTTCCATTTATTTTCTaGATACTGAAATGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIAVPFIF*ILKWLS
Trigger: GCTAAGCCATTTCAGTATGCAGAAAATAAATGGAAC...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR GCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGTTCCATTTATTTTCTaGATACTGAAATGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENVPFIF*ILKWLS
Trigger: GCTAAGCCATTTCAGTATGCAGAAAATAAATGGAAC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR GCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCTTCTCTACACATTATTaGAATGAATCCAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIFSTHY*NESSCQ
Trigger: TTGGCAGCTGGATTCATTGCAATAATGTGTAGAGAA...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TTTGTCTTTCTAGGCTCAACCTGTCTGAGTAAAGAATTTTCTCTTCAGAAGAACTTCAACAAACGAAGGTaGTCTTCCCCATTGATGATA +
Preference number: 4 (lower is better)
Translates to: FVFLGSTCLSKEFSLQKNFNKRR*SSPLMI
Trigger: TATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA...GTTCTTCTGAAGAGAAAATTCTTTACTCAGACAGGTTGAGCCTAGAAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CCA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCAAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: KSNQEILRMWVFLRTAIASLGST*TISSNS
Trigger: AGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACT...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSLGST*TISSNS
Trigger: AGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CCA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTTCTGCATACTGAAATaGCTTAGCCTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTFCILK*LSLNST
Trigger: TGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAA...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTATTCTGCATACTGAAATaGCTTAGCCTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLFCILK*LSLNST
Trigger: TGTACTGTTTAGGCTAAGCCATTTCAGTATGCAGAA...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp CACCAAATTAATATGATCACCAGATATGTAGCCCTTGTCTTCCCAAATAAATCTGAAATCAGACGATACTaGGGTAACTCAGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: HQINMITRYVALVFPNKSEIRRY*GNSEDA
Trigger: AGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTC...AGATTTATTTGGGAAGACAAGGGCTACATATCTGGTGATCATATTAATTTGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR CCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTTTCCCAAAGGTTGTTTaGTCCTCACATACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFFPKVV*SSHTGN
Trigger: ATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAA...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTGTTAAGCACGCCTTTTaGGAGAAGAGTAATCAAGAG +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFVKHAF*EKSNQE
Trigger: CTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAAC...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR TCA 90 bp TCATGTTGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTTTTTCAGGAAGCGATaGTGTTTGAATAACCAGATG +
Preference number: 4 (lower is better)
Translates to: SCCKSLPGNDDVSLFSLNFFRKR*CLNNQM
Trigger: CATCTGGTTATTCAAACATCATCGCTTCCTGAAAAA...ATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACAACATGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000558032.5
ENST00000558204.5
ENST00000559201.5
CDS-3UTR TCA 90 bp TTTCAAGGTCATGTTGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTATCTTCAGAAGAACGTTaGAGAATAGGAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: FQGHVVKVYRGMTMCLYLSSEER*RIGNDD
Trigger: GTCATCATTTCCTATTCTTCAACGTTCTTCTGAAGA...TAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACAACATGACCTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR TCA 90 bp CACCAAATTAATATGATCACCAGATATGTAGCCCTTGTCTTCCCAAATAAATCTCTCACGAAAGTGATTTaGTTGTGTCGCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: HQINMITRYVALVFPNKSLTKVI*LCRKLS
Trigger: ACTTAACTTGCGACACAATCAAATCACTTTCGTGAG...AGATTTATTTGGGAAGACAAGGGCTACATATCTGGTGATCATATTAATTTGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR GCA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAGTTCCATTTATTTTCTaGATACTGAAATGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLVPFIF*ILKWLS
Trigger: GCTAAGCCATTTCAGTATGCAGAAAATAAATGGAAC...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCAGTTTAGGAAGCACTTaGACGATTTCATCAAATTCT +
Preference number: 4 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLISLGST*TISSNS
Trigger: AGAATTTGATGAAATCGTCCAAGTGCTTCCTAAACT...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR GCA 90 bp AGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATTGTTGTGATCATTCCTaGTGTTTGAACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: SYKIVLKVQQTKVVFPIDCCDHS*CLNTPI
Trigger: AATTGGAGTGTTCAAACAGCAGGAATGATCACAACA...ATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp GCGTTAAATTGCTGCAGCATTACAAGATTTGTTTCCTTGAATTTAAGGTGCAGAGTTCCATTTATTTTCTaGATACTGAAATGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: ALNCCSITRFVSLNLRCRVPFIF*ILKWLS
Trigger: GCTAAGCCATTTCAGTATGCAGAAAATAAATGGAAC...TCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTCTTAACACCTGCACTTaGATATTTAACAACCATCTC +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFLNTCT*IFNNHL
Trigger: GAGATGGTTGTTAAATATCCAAGTGCAGGTGTTAAG...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
3UTR CAA 72 bp GCGTTAAATTGCTGCAGCATTACAAGATTTGTTTCCTaGAATTTAAGGTGCAGAGAATTAGGAAACTTAATC +
Preference number: 4 (lower is better)
Translates to: ALNCCSITRFVS*NLRCRELGNLI
Trigger: GATTAAGTTTCCTAATTCTCTGCACCTTAAATTCAAGGAAACAAATCTTGTAATGCTGCAGCAATTTAACGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR GCA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTAGTGCGTTAAATTGCTaGAGCATTACAAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFSALNC*SITRFV
Trigger: AACAAATCTTGTAATGCTGCAGCAATTTAACGCACT...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS GCA 90 bp CACCACCACTTCCGGTCCGTTCCTCTTTACGGCCCACCTCAGCGCTaGCCGCGCGAAATTTGTATCCCTCTGCTTGTGTCCACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: HHHFRSVPLYGPPQR*PREICIPLLVSTGS
Trigger: GGAGCCAGTGGACACAAGCAGAGGGATACAAATTTCGCGCGGGCAGCGCTGAGGTGGGCCGTAAAGAGGAACGGACCGGAAGTGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000561081.5
CDS CCA 90 bp CAGGCAACCTGCTCAGGGTTACCATGGAAACGACCATTTCCGGTCTaGACCTCTCCCGAATCGATAGAGCCACACAGTCGTTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QATCSGLPWKRPFPV*TSPESIEPHSRCSF
Trigger: GAAGCTGCAACGACTGTGTGGCTCTATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCAGGTTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS CCA 90 bp GACCCGAAAGAGGTCATCTCCCAGGCAACCTGCTCAGGGTTACCATaGAAACGACCATTTCCGGTCTGGACCTCTCCCGAATCGATAGAG +
Preference number: 5 (lower is better)
Translates to: DPKEVISQATCSGLP*KRPFPVWTSPESIE
Trigger: CTCTATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGATGACCTCTTTCGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS GCA 90 bp GCGGAGATTCAAAGAGACCCGAAAGAGGTCATCTCCCAGGCAACCTaGTCAGGGTTACCATGGAAACGACCATTTCCGGTCTGGACCTCT +
Preference number: 5 (lower is better)
Translates to: AEIQRDPKEVISQAT*SGLPWKRPFPVWTS
Trigger: AGAGGTCCAGACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGATGACCTCTTTCGGGTCTCTTTGAATCTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp GTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTGCCTACTTGAGAGCCCGCAGTTCACGTaGTTCGCAGCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VFPIDDRTYGQLLSCLLESPQFT*FAARPE
Trigger: TTCTGGCCGGGCTGCGAACAACGTGAACTGCGGGCT...CTCAAGTAGGCAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558204.5
CDS-3UTR CAA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTAGCCCGCAGTTCACGTaGTTCGCAGCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SKQEPRMQCHAISENCLVSPQFT*FAARPE
Trigger: TTCTGGCCGGGCTGCGAACAACGTGAACTGCGGGCT...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TGCAGAGAGGGTGCTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCG +
Preference number: 5 (lower is better)
Translates to: CREGASINLTGVLRRVRIIGYSL*LQVPLS
Trigger: CGACAGTGGGACTTGCAACAACAACGAGTAGCCAAT...GATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTAGGAGCATGGTAGGGTaGCACTGTCTTACATGCCAG +
Preference number: 5 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTRSMVG*HCLTCQ
Trigger: CTGGCATGTAAGACAGTGCAACCCTACCATGCTCCT...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAGCCCGCAGTTCACGTaGTTCGCAGCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSPQFT*FAARPE
Trigger: TTCTGGCCGGGCTGCGAACAACGTGAACTGCGGGCT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTACAAGAGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: WSIRRSWASALNCCSITRGYSLL*QVPLSS
Trigger: GCTCGACAGTGGGACTTGCAACAACAACGAGTAGCC...TCTTGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRGYSLL*QVPLSS
Trigger: GCTCGACAGTGGGACTTGCAACAACAACGAGTAGCC...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: HQQILRALGYSRAPIKARGYSLL*QVPLSS
Trigger: GCTCGACAGTGGGACTTGCAACAACAACGAGTAGCC...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCG +
Preference number: 5 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTIGYSL*LQVPLS
Trigger: CGACAGTGGGACTTGCAACAACAACGAGTAGCCAAT...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGCTGCCCGCGCGAAATTaGTATCCCTCTGCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: QILRALGYSRAPIKARTKLPARN*YPSACV
Trigger: GACACAAGCAGAGGGATACAAATTTCGCGCGGGCAG...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACCTGCTGCCCGCGCGAAATTaGTATCCCTCTGCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SPLMIGHTVSFCLSRLNLLPARN*YPSACV
Trigger: GACACAAGCAGAGGGATACAAATTTCGCGCGGGCAG...CAGGTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CAA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAAGGTACAGCGGACACTaGCTGATGGGGGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRRYSGH*LMGDSR
Trigger: CCTGGAATCCCCCATCAGCAAGTGTCCGCTGTACCT...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CAA 90 bp AAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGAGCCCGCAGTTCACGTaGTTCGCAGCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: KIVLKVQQTKVVFPIDDRSPQFT*FAARPE
Trigger: TTCTGGCCGGGCTGCGAACAACGTGAACTGCGGGCT...CCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558204.5
ENST00000559201.5
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTGTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 5 (lower is better)
Translates to: SVFPQQKDTKTSQSRKPTRWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...AGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559670.5
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKGYSLL*QVPLSS
Trigger: GCTCGACAGTGGGACTTGCAACAACAACGAGTAGCC...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AGCAGCACACTTCACCATCCAGCTGCTGTACCAGAACATCGGGTACAGTATCTCAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: SSTLHHPAAVPEHRVQYLNIGYS*LLQVPL
Trigger: CAGTGGGACTTGCAACAACAACGAGTAGCCAATATT...GAGATACTGTACCCGATGTTCTGGTACAGCAGCTGGATGGTGAAGTGTGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGAGGAGCATGGTAGGGTaGCACTGTCTTACATGCCAG +
Preference number: 5 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLRSMVG*HCLTCQ
Trigger: CTGGCATGTAAGACAGTGCAACCCTACCATGCTCCT...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCATTTGTATCCCTCTGCTaGTGTCCACTGGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: NHQQILRALGYSRAPIKAFVSLC*CPLAPG
Trigger: CCCAGGAGCCAGTGGACACAAGCAGAGGGATACAAA...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443425.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTTTGTATCCCTCTGCTaGTGTCCACTGGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FFPNRRTRRHLRVESPLIFVSLC*CPLAPG
Trigger: CCCAGGAGCCAGTGGACACAAGCAGAGGGATACAAA...AATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR CAA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGAGACGGATAGAGGACTaGCTGCTTTACTTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: QILRALGYSRAPIKARTKRRIED*LLYFLR
Trigger: GCGGAGGAAGTAAAGCAGCAAGTCCTCTATCCGTCT...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS GCA 90 bp TACATCACTGATTTCTACTGGACAGTGAGCTCCACTCTCCTCCACTaGAGATTAAATGGGAGGGTTTCAGTACATCCGCAGAACAAGCTG +
Preference number: 5 (lower is better)
Translates to: YITDFYWTVSSTLLH*RLNGRVSVHPQNKL
Trigger: CAGCTTGTTCTGCGGATGTACTGAAACCCTCCCATTTAATCTGCAGTGGAGGAGAGTGGAGCTCACTGTCCAGTAGAAATCAGTGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558456.5
ENST00000558808.5
ENST00000559069.1
ENST00000559806.5
ENST00000560158.6
CDS GCA 90 bp AAAATACCATTGCATACCCTGTTTCCTCTGGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGGGGTCCTGAGGAGAGTCAGAATCTT +
Preference number: 5 (lower is better)
Translates to: KIPLHTLFPLGMQRG*FHQSDRGPEESQNL
Trigger: AAGATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACAGGGTATGCAATGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560980.5
CDS-3UTR CAA 90 bp TCATGTTGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATAGCCCGCAGTTCACGTaGTTCGCAGCCCGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SCCKSLPGNDDVSLFSLNSPQFT*FAARPE
Trigger: TTCTGGCCGGGCTGCGAACAACGTGAACTGCGGGCT...ATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACAACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558032.5
ENST00000558204.5
ENST00000559201.5
CDS-3UTR CAA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCG +
Preference number: 5 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLIGYSL*LQVPLS
Trigger: CGACAGTGGGACTTGCAACAACAACGAGTAGCCAAT...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGACAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: HQQILRALGYSRAPIKARQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGGAGGCAGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWEAENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCTGCCTC...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKRWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 5 (lower is better)
Translates to: KVQQTKVVFPIDDRTYGQRWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...CTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558204.5
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CAA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 5 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQERWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFGYSLL*QVPLSS
Trigger: GCTCGACAGTGGGACTTGCAACAACAACGAGTAGCC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCG +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKIGYSL*LQVPLS
Trigger: CGACAGTGGGACTTGCAACAACAACGAGTAGCCAAT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCG +
Preference number: 5 (lower is better)
Translates to: NHQQILRALGYSRAPIKAIGYSL*LQVPLS
Trigger: CGACAGTGGGACTTGCAACAACAACGAGTAGCCAAT...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCCTTGTAAAGCATTGTaGAGTCCTGAGTCTAGAGGC +
Preference number: 5 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLPCKAL*SPESRG
Trigger: GCCTCTAGACTCAGGACTCAACAATGCTTTACAAGG...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATCCTTGTAAAGCATTGTaGAGTCCTGAGTCTAGAGGC +
Preference number: 5 (lower is better)
Translates to: VFPQQKDTKTSQSRKPTNPCKAL*SPESRG
Trigger: GCCTCTAGACTCAGGACTCAACAATGCTTTACAAGG...ATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGACAACTGGATTTCCTaGAGGATCAATTGTCAACTG +
Preference number: 5 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTDNWIS*RINCQL
Trigger: CAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTC...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 5 (lower is better)
Translates to: QEPRMQCHAISENCLVPKVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGAGGGCACCAACCCTATaGTTCAACCTACAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRRAPTL*FNLQPK
Trigger: TTTTGGCTGTAGGTTGAACAATAGGGTTGGTGCCCT...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAATCGCCATTCGACGTTaGAGACCCGACAAAGTAAGG +
Preference number: 5 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRIAIRR*RPDKVR
Trigger: CCTTACTTTGTCGGGTCTCAAACGTCGAATGGCGAT...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTATCGCCATTCGACGTTaGAGACCCGACAAAGTAAGG +
Preference number: 5 (lower is better)
Translates to: SKQEPRMQCHAISENCLVIAIRR*RPDKVR
Trigger: CCTTACTTTGTCGGGTCTCAAACGTCGAATGGCGAT...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTGGTCCACCTGCACACTaGGTAACCATCCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSGPPAH*VTILRC
Trigger: ACACCTGAGGATGGTTACCAAGTGTGCAGGTGGACC...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TACTTGAGTAGTTTCTTTCAAGGTCATGTTGTAAAAGTCTACCGGGGAATGACGCTGCCCGCGCGAAATTaGTATCCCTCTGCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: YLSSFFQGHVVKVYRGMTLPARN*YPSACV
Trigger: GACACAAGCAGAGGGATACAAATTTCGCGCGGGCAG...CGTCATTCCCCGGTAGACTTTTACAACATGACCTTGAAAGAAACTACTCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS-3UTR CAA 90 bp ACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCAGAGCCACACAGTCGTaGCAGCTTCTAGTTGTATTC +
Preference number: 5 (lower is better)
Translates to: TKVVFPIDDRTYGQLLSFRATQS*QLLVVF
Trigger: GAATACAACTAGAAGCTGCAACGACTGTGTGGCTCT...GAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559201.5
ENST00000561081.5
CDS-3UTR CAA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGAGCCACACAGTCGTaGCAGCTTCTAGTTGTATTC +
Preference number: 5 (lower is better)
Translates to: HQQILRALGYSRAPIKARRATQS*QLLVVF
Trigger: GAATACAACTAGAAGCTGCAACGACTGTGTGGCTCT...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CTTGCCTACTTGAGTAGTTTCTTTCAAGGTCATGTTGTAAAAGTCTACCGGGGAAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 5 (lower is better)
Translates to: LAYLSSFFQGHVVKVYRGRWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...TCCCCGGTAGACTTTTACAACATGACCTTGAAAGAAACTACTCAAGTAGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558204.5
ENST00000559201.5
CDS-3UTR CAA 90 bp GAGATTCCAGTGCTCCTGAGCCATATAGGGAAAGTGTATCCCCGTCCACTTCAATCTCACGAAAGTGATTaGATTGTGTCGCAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: EIPVLLSHIGKVYPRPLQSHESD*IVSQVK
Trigger: CTTAACTTGCGACACAATCAAATCACTTTCGTGAGA...TTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCGGCTACTCGTTGTTGTaGCAAGTCCCACTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIGYSLL*QVPLSS
Trigger: GCTCGACAGTGGGACTTGCAACAACAACGAGTAGCC...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLNIGYS*LLQVPL
Trigger: CAGTGGGACTTGCAACAACAACGAGTAGCCAATATT...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCACCTTGTAAAGCATTGTaGAGTCCTGAGTCTAGAGGC +
Preference number: 5 (lower is better)
Translates to: NHQQILRALGYSRAPIKAPCKAL*SPESRG
Trigger: GCCTCTAGACTCAGGACTCAACAATGCTTTACAAGG...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCTTGTAAAGCATTGTaGAGTCCTGAGTCTAGAGGC +
Preference number: 5 (lower is better)
Translates to: SKQEPRMQCHAISENCLVPCKAL*SPESRG
Trigger: GCCTCTAGACTCAGGACTCAACAATGCTTTACAAGG...AACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TTCAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 5 (lower is better)
Translates to: FNKRRWSSPLMIGHTVSFVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...AAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR CAA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAAGGGCACCAACCCTATaGTTCAACCTACAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRRAPTL*FNLQPK
Trigger: TTTTGGCTGTAGGTTGAACAATAGGGTTGGTGCCCT...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAACAGACCCAGGTCTCCTaGTCTTTTTATCTGGGGATT +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKQTQVS*SFYLGI
Trigger: AATCCCCAGATAAAAAGACAAGGAGACCTGGGTCTG...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAGGTCCACCTGCACACTaGGTAACCATCCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLGPPAH*VTILRC
Trigger: ACACCTGAGGATGGTTACCAAGTGTGCAGGTGGACC...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CATAAGACGGAATTCCTGATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGTGCCCCCTCCTGAAGTaGATTCTCTACACATTATTG +
Preference number: 5 (lower is better)
Translates to: HKTEFLILPPSRCSIHRLCPLLK*ILYTLL
Trigger: CAATAATGTGTAGAGAATCAACTTCAGGAGGGGGCA...CAATCTGTGAATGGAACATCTGCTGGGAGGAAGGATCAGGAATTCCGTCTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TGTAAAAGTCTACCGGGGAATGACGATGTGTCTTTATTTAGCTTGAATTCAACCTTTGTATCCCTCTGCTaGTGTCCACTGGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CKSLPGNDDVSLFSLNSTFVSLC*CPLAPG
Trigger: CCCAGGAGCCAGTGGACACAAGCAGAGGGATACAAA...GGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559201.5
CDS CCA 90 bp AATTATCCACATCTCTTGCAACATTGCTACATCACTGATTTCTACTaGACAGTGAGCTCCACTCTCCTCCACTGCAGATTAAATGGGAGG +
Preference number: 5 (lower is better)
Translates to: NYPHLLQHCYITDFY*TVSSTLLHCRLNGR
Trigger: CCTCCCATTTAATCTGCAGTGGAGGAGAGTGGAGCTCACTGTCCAGTAGAAATCAGTGATGTAGCAATGTTGCAAGAGATGTGGATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558456.5
ENST00000558808.5
ENST00000559069.1
CDS-3UTR CAA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 5 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSRWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCG +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENIGYSL*LQVPLS
Trigger: CGACAGTGGGACTTGCAACAACAACGAGTAGCCAAT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQENIGYS*LLQVPL
Trigger: CAGTGGGACTTGCAACAACAACGAGTAGCCAATATT...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCCAGTTTAGGAAGCACTaGGACGATTTCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: PQQKDTKTSQSRKPTNFFQFRKH*DDFIKF
Trigger: GAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTG...GAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATTCCTTGAGGATCAATaGTCAACTGGTCAATACGAC +
Preference number: 5 (lower is better)
Translates to: QEPRMQCHAISENCLVPKFLEDQ*STGQYD
Trigger: GTCGTATTGACCAGTTGACAATTGATCCTCAAGGAA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGATTCCTTGAGGATCAATaGTCAACTGGTCAATACGAC +
Preference number: 5 (lower is better)
Translates to: HQQILRALGYSRAPIKARFLEDQ*STGQYD
Trigger: GTCGTATTGACCAGTTGACAATTGATCCTCAAGGAA...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp ATCCTTCCTCCCAGCAGATGTTCCATTCACAGATTGCTCTCATCTCAGTTGATGTTCCTTGAGGATCAATaGTCAACTGGTCAATACGAC +
Preference number: 5 (lower is better)
Translates to: ILPPSRCSIHRLLSSQLMFLEDQ*STGQYD
Trigger: GTCGTATTGACCAGTTGACAATTGATCCTCAAGGAA...CATCAACTGAGATGAGAGCAATCTGTGAATGGAACATCTGCTGGGAGGAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCCTTGAGGATCAATaGTCAACTGGTCAATACGAC +
Preference number: 5 (lower is better)
Translates to: VFPQQKDTKTSQSRKPTNFLEDQ*STGQYD
Trigger: GTCGTATTGACCAGTTGACAATTGATCCTCAAGGAA...ATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGTTCCTTGAGGATCAATaGTCAACTGGTCAATACGAC +
Preference number: 5 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRFLEDQ*STGQYD
Trigger: GTCGTATTGACCAGTTGACAATTGATCCTCAAGGAA...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGATTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 5 (lower is better)
Translates to: HQQILRALGYSRAPIKARFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...TCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AACTGGTCAATACGACGGAGTTGGGCTAGTGCGTTAAATTGCTGCAGCATTACATTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 5 (lower is better)
Translates to: NWSIRRSWASALNCCSITFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...TGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TTCACTCATGCATCCCTAATACTTCTGAGACACAGGTACACATGCATGTCTATTCAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: FTHASLILLRHRYTCMSIQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...AATAGACATGCATGTGTACCTGTGTCTCAGAAGTATTAGGGATGCATGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GGCACCAATCAAAGCAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTCTATTAAAAGAGCATTaGAGAGCTAACAATGGAAGG +
Preference number: 5 (lower is better)
Translates to: GTNQSKNQGCSATPSLKTLLKEH*RANNGR
Trigger: CCTTCCATTGTTAGCTCTCAAATGCTCTTTTAATAG...AGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAAACCTTGTGGCCATCATaGACTACTGTTTCTCATACT +
Preference number: 5 (lower is better)
Translates to: QEPRMQCHAISENCLVPKTLWPS*TTVSHT
Trigger: AGTATGAGAAACAGTAGTCAATGATGGCCACAAGGT...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CAAGAACCAAGGATGCAGTGCCACGCCATCTCTGAAAACTGTTTAGTTCCCAAATCTCACGAAAGTGATTaGATTGTGTCGCAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: QEPRMQCHAISENCLVPKSHESD*IVSQVK
Trigger: CTTAACTTGCGACACAATCAAATCACTTTCGTGAGA...TTTGGGAACTAAACAGTTTTCAGAGATGGCGTGGCACTGCATCCTTGGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGCTCCTTAAGCAAAGATaGTTTATGACTTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: QILRALGYSRAPIKARTKLLKQR*FMTFPL
Trigger: AAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAG...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GTTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATCTCCTTAAGCAAAGATaGTTTATGACTTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: VFPQQKDTKTSQSRKPTNLLKQR*FMTFPL
Trigger: AAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAG...ATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTC +
Preference number: 5 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRHCRAT*LIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTG...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAAAGCCTAGAGTGGGAACAGTTACCCAGACTCCCAAAGAGTCACAAGTTCTTACACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTC +
Preference number: 5 (lower is better)
Translates to: QSLEWEQLPRLPKSHKFLHCRAT*LIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTG...TAAGAACTTGTGACTCTTTGGGAGTCTGGGTAACTGTTCCCACTCTAGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCATTGGCTACTCGTTGTaGTTGCAAGTCCCACTGTCG +
Preference number: 5 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIIGYSL*LQVPLS
Trigger: CGACAGTGGGACTTGCAACAACAACGAGTAGCCAAT...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCAATCTGGTTAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: KDTKTSQSRKPTNFFNLVNIGYS*LLQVPL
Trigger: CAGTGGGACTTGCAACAACAACGAGTAGCCAATATT...AACCAGATTGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGTCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: QILRALGYSRAPIKARTKSFVAI*ATRCCC
Trigger: GCAACAACAACGAGTAGCCAATATTGCTACAAATGA...CTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCCCTTGTAAAGCATTGTaGAGTCCTGAGTCTAGAGGC +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFPCKAL*SPESRG
Trigger: GCCTCTAGACTCAGGACTCAACAATGCTTTACAAGG...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGATCATTCCTGCTGTTaGAACACTCCAATTCCTATC +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKDHSCC*NTPIPI
Trigger: GATAGGAATTGGAGTGTTCAAACAGCAGGAATGATC...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTCTTTCTAGGCTCAACGATCATTCCTGCTGTTaGAACACTCCAATTCCTATC +
Preference number: 5 (lower is better)
Translates to: SSPLMIGHTVSFCLSRLNDHSCC*NTPIPI
Trigger: GATAGGAATTGGAGTGTTCAAACAGCAGGAATGATC...GTTGAGCCTAGAAAGACAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561081.5
CDS-3UTR CAA 90 bp AAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACCAAGGCAGTTTAGGAAGCACTaGGACGATTTCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: KYYVLWAIAGHQSKQEPRQFRKH*DDFIKF
Trigger: GAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTG...CCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAGACAACTGGATTTCCTaGAGGATCAATTGTCAACTG +
Preference number: 5 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRDNWIS*RINCQL
Trigger: CAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTC...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCATTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 5 (lower is better)
Translates to: NHQQILRALGYSRAPIKAFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTACAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCAACGTATTGGGTGTTaGCTGTGTGCCAGGCATGAT +
Preference number: 5 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIQRIGC*LCARHD
Trigger: ATCATGCCTGGCACACAGCAAACACCCAATACGTTG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp CCCAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGATCCATATGTTTCAGTTaGGAGAGGCTAAAGGATCAG +
Preference number: 5 (lower is better)
Translates to: PRSPCLFIWGLSSPRNFRSICFS*ERLKDQ
Trigger: CTGATCCTTTAGCCTCTCCAAACTGAAACATATGGA...TCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAAGAAATGGCAATTaGTTCCCTAGATCACCACTC +
Preference number: 5 (lower is better)
Translates to: NHQQILRALGYSRAPIKARRNGN*FPRSPL
Trigger: GAGTGGTGATCTAGGGAACAAATTGCCATTTCTTCT...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAATGCCCCCTCCTGAAGTaGATTCTCTACACATTATTG +
Preference number: 5 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQCPLLK*ILYTLL
Trigger: CAATAATGTGTAGAGAATCAACTTCAGGAGGGGGCA...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAGAGCCACACAGTCGTaGCAGCTTCTAGTTGTATTC +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFRATQS*QLLVVF
Trigger: GAATACAACTAGAAGCTGCAACGACTGTGTGGCTCT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAGAGCCACACAGTCGTaGCAGCTTCTAGTTGTATTC +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENRATQS*QLLVVF
Trigger: GAATACAACTAGAAGCTGCAACGACTGTGTGGCTCT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS CCA 90 bp AATCATTTCTATTTACTGCAACATTGCTACATCACTGATTTCTACTaGACAGTGAGCTCCACTCTCCTCCACTGCAGATTAAATGGGAGG +
Preference number: 5 (lower is better)
Translates to: NHFYLLQHCYITDFY*TVSSTLLHCRLNGR
Trigger: CCTCCCATTTAATCTGCAGTGGAGGAGAGTGGAGCTCACTGTCCAGTAGAAATCAGTGATGTAGCAATGTTGCAGTAAATAGAAATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559806.5
ENST00000560158.6
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAATCTCACGAAAGTGATTaGATTGTGTCGCAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKSHESD*IVSQVK
Trigger: CTTAACTTGCGACACAATCAAATCACTTTCGTGAGA...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCAATCTGCTCCTTAAGCAAAGATaGTTTATGACTTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: QKDTKTSQSRKPTNFFNLLLKQR*FMTFPL
Trigger: AAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAG...CAGATTGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAACTCCTTAAGCAAAGATaGTTTATGACTTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKLLKQR*FMTFPL
Trigger: AAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAG...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAACACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTC +
Preference number: 5 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQEHCRAT*LIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTG...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TTTTTCCCCAACAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTCACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTC +
Preference number: 5 (lower is better)
Translates to: FFPNRRTRRHLRVESPLIHCRAT*LIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTG...AATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFNIGYS*LLQVPL
Trigger: CAGTGGGACTTGCAACAACAACGAGTAGCCAATATT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp GAAGATGCTACATGTGCTAGGATTCCAAAGAGCCTTTCAGCCATTATCATATCAAATATTGGCTACTCGTaGTTGTTGCAAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: EDATCARIPKSLSAIIISNIGYS*LLQVPL
Trigger: CAGTGGGACTTGCAACAACAACGAGTAGCCAATATT...TGATATGATAATGGCTGAAAGGCTCTTTGGAATCCTAGCACATGTAGCATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp ATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCAAGAATCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: ISKYYVLWAIAGHQSKQESFVAI*ATRCCC
Trigger: GCAACAACAACGAGTAGCCAATATTGCTACAAATGA...TTCTTGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAGAAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCAATCTGAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: QKDTKTSQSRKPTNFFNLKPCKA*LSPESR
Trigger: TCTAGACTCAGGACTCAACAATGCTTTACAAGGTTT...CAGATTGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CTGAATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: LNHQQILRALGYSRAPIKKPCKA*LSPESR
Trigger: TCTAGACTCAGGACTCAACAATGCTTTACAAGGTTT...TTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATTCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AATCATCAGCAAATACTACGTGCTTTGGGCTATAGCAGGGCACCAATCAAAGCACAGTTTAGGAAGCACTaGGACGATTTCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: NHQQILRALGYSRAPIKAQFRKH*DDFIKF
Trigger: GAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTG...TGCTTTGATTGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTGCTGATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAGGACACGAAGACATCTCAGAGTCGAAAGCCCACTAATTTCTTCAATCTGGTTTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 5 (lower is better)
Translates to: KDTKTSQSRKPTNFFNLVFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...AACCAGATTGAAGAAATTAGTGGGCTTTCGACTCTGAGATGTCTTCGTGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTACAGACCCAGGTCTCCTaGTCTTTTTATCTGGGGATT +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLQTQVS*SFYLGI
Trigger: AATCCCCAGATAAAAAGACAAGGAGACCTGGGTCTG...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAAGAGCCACACAGTCGTaGCAGCTTCTAGTTGTATTC +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLRATQS*QLLVVF
Trigger: GAATACAACTAGAAGCTGCAACGACTGTGTGGCTCT...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAACAAACGAAGGTGGTCTTCCCCATTGATGATAGGACATACGGTCAGCTTTTGTTTTGTCTTGCCTACTaGAGTAGTTTCTTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: QQTKVVFPIDDRTYGQLLFCLAY*SSFFQG
Trigger: ACCTTGAAAGAAACTACTCAAGTAGGCAAGACAAAA...CAAAAGCTGACCGTATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558204.5
CDS-3UTR CAA 90 bp ATTTTTGGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCAGGTGGTCTTCCCCATaGATGATAGGACATACGGTC +
Preference number: 5 (lower is better)
Translates to: IFGLLSAVGRASYRNFYCRWSSP*MIGHTV
Trigger: GACCGTATGTCCTATCATCAATGGGGAAGACCACCT...GCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CAGGTCTCCTTGTCTTTTTATCTGGGGATTATCTTCACCAAGGAACTTCAGAACTCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: QVSLSFYLGIIFTKELQNSFVAI*ATRCCC
Trigger: GCAACAACAACGAGTAGCCAATATTGCTACAAATGA...GTTCTGAAGTTCCTTGGTGAAGATAATCCCCAGATAAAAAGACAAGGAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACGATCATTCCTGCTGTTaGAACACTCCAATTCCTATC +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENDHSCC*NTPIPI
Trigger: GATAGGAATTGGAGTGTTCAAACAGCAGGAATGATC...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGATCATTCCTGCTGTTaGAACACTCCAATTCCTATC +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFDHSCC*NTPIPI
Trigger: GATAGGAATTGGAGTGTTCAAACAGCAGGAATGATC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTTTCCAATCTGCCAGAATCCCACAGACAATATACTCTTGGTTCTCCTCTCAACAGTTTAGGAAGCACTaGGACGATTTCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: SFQSARIPQTIYSWFSSQQFRKH*DDFIKF
Trigger: GAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTG...TTGAGAGGAGAACCAAGAGTATATTGTCTGTGGGATTCTGGCAGATTGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTTCCTTGAGGATCAATaGTCAACTGGTCAATACGAC +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFFLEDQ*STGQYD
Trigger: GTCGTATTGACCAGTTGACAATTGATCCTCAAGGAA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTGACAACTGGATTTCCTaGAGGATCAATTGTCAACTG +
Preference number: 5 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSDNWIS*RINCQL
Trigger: CAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTC...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGACAACTGGATTTCCTaGAGGATCAATTGTCAACTG +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFDNWIS*RINCQL
Trigger: CAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 5 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp AGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATCAAATACTACGTGCTTaGGGCTATAGCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: SYKIVLKVQQTKVVFPIDQILRA*GYSRAP
Trigger: TGGTGCCCTGCTATAGCCCAAAGCACGTAGTATTTG...ATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp CTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTGGCTTCCTATCCCAGTTTaGACTCATTTGCATATTCTC +
Preference number: 5 (lower is better)
Translates to: LYFSTPNSYSHLLNTCTWLPIPV*THLHIL
Trigger: GAGAATATGCAAATGAGTCAAAACTGGGATAGGAAG...CCAAGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GTGAATGTGGGTACTGTCTACTATTTATTGGTTGAAATACCCTTAGTTACGTTTCAACGTATTGGGTGTTaGCTGTGTGCCAGGCATGAT +
Preference number: 5 (lower is better)
Translates to: VNVGTVYYLLVEIPLVTFQRIGC*LCARHD
Trigger: ATCATGCCTGGCACACAGCAAACACCCAATACGTTG...AAACGTAACTAAGGGTATTTCAACCAATAAATAGTAGACAGTACCCACATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTCCATATGTTTCAGTTaGGAGAGGCTAAAGGATCAG +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSICFS*ERLKDQ
Trigger: CTGATCCTTTAGCCTCTCCAAACTGAAACATATGGA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCGAACGCAAAATGAGTTaGGAGTGTAGAACTAGATGG +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFERKMS*ECRTRW
Trigger: CCATCTAGTTCTACACTCCAAACTCATTTTGCGTTC...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTAGAAGAAATGGCAATTaGTTCCCTAGATCACCACTC +
Preference number: 5 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSRRNGN*FPRSPL
Trigger: GAGTGGTGATCTAGGGAACAAATTGCCATTTCTTCT...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTACCTTGTGGCCATCATaGACTACTGTTTCTCATACT +
Preference number: 5 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSTLWPS*TTVSHT
Trigger: AGTATGAGAAACAGTAGTCAATGATGGCCACAAGGT...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTCTCACGAAAGTGATTaGATTGTGTCGCAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSHESD*IVSQVK
Trigger: CTTAACTTGCGACACAATCAAATCACTTTCGTGAGA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCTCTCACGAAAGTGATTaGATTGTGTCGCAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFSHESD*IVSQVK
Trigger: CTTAACTTGCGACACAATCAAATCACTTTCGTGAGA...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCTCCTTAAGCAAAGATaGTTTATGACTTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENLLKQR*FMTFPL
Trigger: AAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCCTCCTTAAGCAAAGATaGTTTATGACTTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFLLKQR*FMTFPL
Trigger: AAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAG...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTC +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENHCRAT*LIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENSFVAI*ATRCCC
Trigger: GCAACAACAACGAGTAGCCAATATTGCTACAAATGA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENKPCKA*LSPESR
Trigger: TCTAGACTCAGGACTCAACAATGCTTTACAAGGTTT...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp TTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCTTCCTTTCAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: LVPKGCLVLTYRQLILPFKPCKA*LSPESR
Trigger: TCTAGACTCAGGACTCAACAATGCTTTACAAGGTTT...GAAAGGAAGGATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp GAAGATGCTACATGTGCTAGGATTCCAAAGAGCCTTTCAGCCATTATCATATCAAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: EDATCARIPKSLSAIIISKPCKA*LSPESR
Trigger: TCTAGACTCAGGACTCAACAATGCTTTACAAGGTTT...TGATATGATAATGGCTGAAAGGCTCTTTGGAATCCTAGCACATGTAGCATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACCAGTTTAGGAAGCACTaGGACGATTTCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENQFRKH*DDFIKF
Trigger: GAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTG...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000560369.5
ENST00000561081.5
CDS-3UTR CAA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCGACAACTGGATTTCCTaGAGGATCAATTGTCAACTG +
Preference number: 5 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIDNWIS*RINCQL
Trigger: CAGTTGACAATTGATCCTCAAGGAAATCCAGTTGTC...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp ATTTTTGGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGTTCCCAAAGGTTGTTaGGTCCTCACATACAGGCAA +
Preference number: 5 (lower is better)
Translates to: IFGLLSAVGRASYRNFYCVPKGC*VLTYRQ
Trigger: TTGCCTGTATGTGAGGACCAAACAACCTTTGGGAAC...GCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCTTTAGTTCCCAAAGGTaGTTTGGTCCTCACATACAG +
Preference number: 5 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIFSSQR*FGPHIQ
Trigger: CTGTATGTGAGGACCAAACAACCTTTGGGAACTAAA...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AAGAGTAATCAAGAGATCTTAAGGATGTGGGTCTTTCTCAGAACCGCAATAGCACTTCCTATCCCAGTTTaGACTCATTTGCATATTCTC +
Preference number: 5 (lower is better)
Translates to: KSNQEILRMWVFLRTAIALPIPV*THLHIL
Trigger: GAGAATATGCAAATGAGTCAAAACTGGGATAGGAAG...TGCTATTGCGGTTCTGAGAAAGACCCACATCCTTAAGATCTCTTGATTACTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAGAACGCAAAATGAGTTaGGAGTGTAGAACTAGATGG +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLERKMS*ECRTRW
Trigger: CCATCTAGTTCTACACTCCAAACTCATTTTGCGTTC...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTTCTCACGAAAGTGATTaGATTGTGTCGCAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTSHESD*IVSQVK
Trigger: CTTAACTTGCGACACAATCAAATCACTTTCGTGAGA...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp AATCTATACTTCTCAACTCCCAACTCATATTCACACCTACTTAACACCTGCACTCTCCTTAAGCAAAGATaGTTTATGACTTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: NLYFSTPNSYSHLLNTCTLLKQR*FMTFPL
Trigger: AAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAG...AGTGCAGGTGTTAAGTAGGTGTGAATATGAGTTGGGAGTTGAGAAGTATAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCACTGTCGAGCTACGTaGTTAATTGTTAACCTTTTC +
Preference number: 5 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIHCRAT*LIVNLF
Trigger: GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTATCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLSFVAI*ATRCCC
Trigger: GCAACAACAACGAGTAGCCAATATTGCTACAAATGA...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAAAACCTTGTAAAGCATaGTTGAGTCCTGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLKPCKA*LSPESR
Trigger: TCTAGACTCAGGACTCAACAATGCTTTACAAGGTTT...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp TCTGAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTACAGTTTAGGAAGCACTaGGACGATTTCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: SENCLVPKGCLVLTYRQLQFRKH*DDFIKF
Trigger: GAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTG...TAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GAAAACTGTTTAGTTCCCAAAGGTTGTTTGGTCCTCACATACAGGCAATTAATCCAGTTTAGGAAGCACTaGGACGATTTCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: ENCLVPKGCLVLTYRQLIQFRKH*DDFIKF
Trigger: GAATTTGATGAAATCGTCCAAGTGCTTCCTAAACTG...GATTAATTGCCTGTATGTGAGGACCAAACAACCTTTGGGAACTAAACAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260382.10
ENST00000443425.6
ENST00000544974.6
ENST00000560107.6
ENST00000560158.6
ENST00000561081.5
CDS-3UTR CAA 90 bp GGTAACCTGTTAAAGTTAAGCACGCCTTTTGGGAGAAGAGTAATCAAGAGATCTCTATTAAAAGAGCATTaGAGAGCTAACAATGGAAGG +
Preference number: 5 (lower is better)
Translates to: GNLLKLSTPFGRRVIKRSLLKEH*RANNGR
Trigger: CCTTCCATTGTTAGCTCTCAAATGCTCTTTTAATAG...AGATCTCTTGATTACTCTTCTCCCAAAAGGCGTGCTTAACTTTAACAGGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260382.10
ENST00000544974.6
CDS-3UTR CAA 90 bp TCCTTCCTTTCTCCTGCTTTCCTTCCTTCCTTCTTAACTTTTAGCTATGAGAACTTTTGTCTTGCCTACTaGAGTAGTTTCTTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: SFLSPAFLPSFLTFSYENFCLAY*SSFFQG
Trigger: ACCTTGAAAGAAACTACTCAAGTAGGCAAGACAAAA...GTTCTCATAGCTAAAAGTTAAGAAGGAAGGAAGGAAAGCAGGAGAAAGGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560107.6
CDS-3UTR CAA 90 bp ATTTTTGGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCGATCATTCCTGCTGTTaGAACACTCCAATTCCTATC +
Preference number: 5 (lower is better)
Translates to: IFGLLSAVGRASYRNFYCDHSCC*NTPIPI
Trigger: GATAGGAATTGGAGTGTTCAAACAGCAGGAATGATC...GCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS-3UTR CAA 90 bp AGTTATAAAATTGTGTTGAAAGTTCAACAAACGAAGGTGGTCTTCCCCATTGATTTCCTTGAGGATCAATaGTCAACTGGTCAATACGAC +
Preference number: 5 (lower is better)
Translates to: SYKIVLKVQQTKVVFPIDFLEDQ*STGQYD
Trigger: GTCGTATTGACCAGTTGACAATTGATCCTCAAGGAA...ATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS TCA 90 bp TTCCTTGAATTTAAGGTGATAACTTTAATTCATCCAATGCACCATTaGTGGAATCCATCCAATATTGAATTCTGGGTGACTCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: FLEFKVITLIHPMHH*WNPSNIEFWVTPSE
Trigger: CTCTGAAGGAGTCACCCAGAATTCAATATTGGATGGATTCCATCAATGGTGCATTGGATGAATTAAAGTTATCACCTTAAATTCAAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559422.1
CDS-3UTR CAA 90 bp ATTTTTGGTCTGTTATCTGCTGTAGGCAGAGCTTCATATAGGAATTTTTATTGCTCATTTGTAGCAATATaGGCTACTCGTTGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: IFGLLSAVGRASYRNFYCSFVAI*ATRCCC
Trigger: GCAACAACAACGAGTAGCCAATATTGCTACAAATGA...GCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560107.6
ENST00000561081.5
CDS GCA 72 bp CCGCTGGGCTCATTTTGCCTACCCACCCTGGCAGGCTaGACTCAGCTCATGCTACTGGCCTGGGTCCCACGC +
Preference number: 6 (lower is better)
Translates to: PLGSFCLPTLAG*TQLMLLAWVPR
Trigger: GCGTGGGACCCAGGCCAGTAGCATGAGCTGAGTGCAGCCTGCCAGGGTGGGTAGGCAAAATGAGCCCAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS GCA 72 bp CACCTCAGCGCTGCCCGCGCGAAATTTGTATCCCTCTaGTTGTGTCCACTGGCTCCTGGGGAGCAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: HLSAARAKFVSL*LCPLAPGEQRR
Trigger: CCTGCGCTGCTCCCCAGGAGCCAGTGGACACAAGCAGAGGGATACAAATTTCGCGCGGGCAGCGCTGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000561081.5
CDS CCA 72 bp ACCCTGGCAGGCTGCACTCAGCTCATGCTACTGGCCTaGGTCCCACGCCTGCTAAGGGCAAGTCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: TLAGCTQLMLLA*VPRLLRASQVW
Trigger: CCACACCTGACTTGCCCTTAGCAGGCGTGGGACCCAGGCCAGTAGCATGAGCTGAGTGCAGCCTGCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS CAA 90 bp GTCCGTTCCTCTTTACGGCCCACCTCAGCGCTGCCCGCGCGAAATTaGTATCCCTCTGCTTGTGTCCACTGGCTCCTGGGGAGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: VRSSLRPTSALPARN*YPSACVHWLLGSSA
Trigger: TGCGCTGCTCCCCAGGAGCCAGTGGACACAAGCAGAGGGATACAAATTTCGCGCGGGCAGCGCTGAGGTGGGCCGTAAAGAGGAACGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000561081.5
CDS CAA 72 bp TCTTTACGGCCCACCTCAGCGCTGCCCGCGCGAAATTaGTATCCCTCTGCTTGTGTCCACTGGCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: SLRPTSALPARN*YPSACVHWLLG
Trigger: CCCCAGGAGCCAGTGGACACAAGCAGAGGGATACAAATTTCGCGCGGGCAGCGCTGAGGTGGGCCGTAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000561081.5
CDS GCA 72 bp TTCCGGTCCGTTCCTCTTTACGGCCCACCTCAGCGCTaGCCGCGCGAAATTTGTATCCCTCTGCTTGTGTCC +
Preference number: 6 (lower is better)
Translates to: FRSVPLYGPPQR*PREICIPLLVS
Trigger: GGACACAAGCAGAGGGATACAAATTTCGCGCGGGCAGCGCTGAGGTGGGCCGTAAAGAGGAACGGACCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000561081.5
CDS CCA 72 bp CAGTGGTACCTTTGCCCAAGTTTTGCTCTGGCCCGCTaGGCTCATTTTGCCTACCCACCCTGGCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: QWYLCPSFALAR*AHFAYPPWQAA
Trigger: TGCAGCCTGCCAGGGTGGGTAGGCAAAATGAGCCCAGCGGGCCAGAGCAAAACTTGGGCAAAGGTACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS CCA 72 bp TCTGTGGCCAGTGGTACCTTTGCCCAAGTTTTGCTCTaGCCCGCTGGGCTCATTTTGCCTACCCACCCTGGC +
Preference number: 6 (lower is better)
Translates to: SVASGTFAQVLL*PAGLILPTHPG
Trigger: GCCAGGGTGGGTAGGCAAAATGAGCCCAGCGGGCCAGAGCAAAACTTGGGCAAAGGTACCACTGGCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS CAA 72 bp TTTGCCCAAGTTTTGCTCTGGCCCGCTGGGCTCATTTaGCCTACCCACCCTGGCAGGCTGCACTCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: FAQVLLWPAGLI*PTHPGRLHSAH
Trigger: ATGAGCTGAGTGCAGCCTGCCAGGGTGGGTAGGCAAAATGAGCCCAGCGGGCCAGAGCAAAACTTGGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS GCA 72 bp AGAGTGAGACTCCATCCTTCACTGCCATCATCGCCCTaGCTTTCCCAGTCCTGCTGGCTGCGCTCAGTCTTT +
Preference number: 6 (lower is better)
Translates to: RVRLHPSLPSSP*LSQSCWLRSVF
Trigger: AAAGACTGAGCGCAGCCAGCAGGACTGGGAAAGGCAGGGCGATGATGGCAGTGAAGGATGGAGTCTCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544974.6
ENST00000558799.5
CDS CCA 72 bp GAGGTCATCTCCCAGGCAACCTGCTCAGGGTTACCATaGAAACGACCATTTCCGGTCTGGACCTCTCCCGAA +
Preference number: 6 (lower is better)
Translates to: EVISQATCSGLP*KRPFPVWTSPE
Trigger: TTCGGGAGAGGTCCAGACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGATGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS CAA 72 bp GAAACCTCTGTGGCCAGTGGTACCTTTGCCCAAGTTTaGCTCTGGCCCGCTGGGCTCATTTTGCCTACCCAC +
Preference number: 6 (lower is better)
Translates to: ETSVASGTFAQV*LWPAGLILPTH
Trigger: GTGGGTAGGCAAAATGAGCCCAGCGGGCCAGAGCAAAACTTGGGCAAAGGTACCACTGGCCACAGAGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS GCA 72 bp CAAAGAGACCCGAAAGAGGTCATCTCCCAGGCAACCTaGTCAGGGTTACCATGGAAACGACCATTTCCGGTC +
Preference number: 6 (lower is better)
Translates to: QRDPKEVISQAT*SGLPWKRPFPV
Trigger: GACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCAGGTTGCCTGGGAGATGACCTCTTTCGGGTCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS CCA 72 bp TGCTCAGGGTTACCATGGAAACGACCATTTCCGGTCTaGACCTCTCCCGAATCGATAGAGCCACACAGTCGT +
Preference number: 6 (lower is better)
Translates to: CSGLPWKRPFPV*TSPESIEPHSR
Trigger: ACGACTGTGTGGCTCTATCGATTCGGGAGAGGTCCAGACCGGAAATGGTCGTTTCCATGGTAACCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS CCA 72 bp GGTGTCATTTTTCTGACCAGAAACCTCTGTGGCCAGTaGTACCTTTGCCCAAGTTTTGCTCTGGCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: GVIFLTRNLCGQ*YLCPSFALARW
Trigger: CCAGCGGGCCAGAGCAAAACTTGGGCAAAGGTACCACTGGCCACAGAGGTTTCTGGTCAGAAAAATGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS CAA 72 bp CTGGACCTCTCCCGAATCGATAGAGCCACACAGTCGTaGCAGCTTCTAGTTGTATTCGTGAGAGCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: LDLSRIDRATQS*QLLVVFVRAQC
Trigger: GCACTGGGCTCTCACGAATACAACTAGAAGCTGCAACGACTGTGTGGCTCTATCGATTCGGGAGAGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS CAA 90 bp ATTTCCGGTCTGGACCTCTCCCGAATCGATAGAGCCACACAGTCGTaGCAGCTTCTAGTTGTATTCGTGAGAGCCCAGTGCGTCACCACT +
Preference number: 6 (lower is better)
Translates to: ISGLDLSRIDRATQS*QLLVVFVRAQCVTT
Trigger: AGTGGTGACGCACTGGGCTCTCACGAATACAACTAGAAGCTGCAACGACTGTGTGGCTCTATCGATTCGGGAGAGGTCCAGACCGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443425.6
ENST00000559201.5
ENST00000560107.6
ENST00000560369.5
ENST00000561081.5
CDS GCA 72 bp TTTCTGACCAGAAACCTCTGTGGCCAGTGGTACCTTTaGCCAAGTTTTGCTCTGGCCCGCTGGGCTCATTTT +
Preference number: 6 (lower is better)
Translates to: FLTRNLCGQWYL*PSFALARWAHF
Trigger: AAAATGAGCCCAGCGGGCCAGAGCAAAACTTGGGCAAAGGTACCACTGGCCACAGAGGTTTCTGGTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS GCA 72 bp TTGCATACCCTGTTTCCTCTGGGAATGCAGAGAGGGTaGTTCCATCAATCTGACAGGGGTCCTGAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LHTLFPLGMQRG*FHQSDRGPEES
Trigger: ACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTGCATTCCCAGAGGAAACAGGGTATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560980.5
CDS CAA 90 bp ACACTTGCTGATGGGGGATTCCAGGAGGTGGGATTTCAAGGTAATTaGAGACGGATAGAGGACTTGCTGCTTTACTTCCTCCGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: TLADGGFQEVGFQGN*RRIEDLLLYFLRPG
Trigger: CCCAGGGCGGAGGAAGTAAAGCAGCAAGTCCTCTATCCGTCTCAAATTACCTTGAAATCCCACCTCCTGGAATCCCCCATCAGCAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS CCA 72 bp GACAGTGAGCTCCACTCTCCTCCACTGCAGATTAAATaGGAGGGTTTCAGTACATCCGCAGAACAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: DSELHSPPLQIK*EGFSTSAEQAA
Trigger: TGCAGCTTGTTCTGCGGATGTACTGAAACCCTCCCATTTAATCTGCAGTGGAGGAGAGTGGAGCTCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558456.5
ENST00000558808.5
ENST00000559069.1
ENST00000559806.5
ENST00000560158.6
CDS CAA 72 bp GTGGGATTTCAAGGTAATTTGAGACGGATAGAGGACTaGCTGCTTTACTTCCTCCGCCCTGGGGGATTCCCA +
Preference number: 6 (lower is better)
Translates to: VGFQGNLRRIED*LLYFLRPGGFP
Trigger: TGGGAATCCCCCAGGGCGGAGGAAGTAAAGCAGCAAGTCCTCTATCCGTCTCAAATTACCTTGAAATCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS CAA 90 bp TTCCAGGAGGTGGGATTTCAAGGTAATTTGAGACGGATAGAGGACTaGCTGCTTTACTTCCTCCGCCCTGGGGGATTCCCATTTTCACAC +
Preference number: 6 (lower is better)
Translates to: FQEVGFQGNLRRIED*LLYFLRPGGFPFSH
Trigger: GTGTGAAAATGGGAATCCCCCAGGGCGGAGGAAGTAAAGCAGCAAGTCCTCTATCCGTCTCAAATTACCTTGAAATCCCACCTCCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544974.6
CDS GCA 72 bp GATTTCTACTGGACAGTGAGCTCCACTCTCCTCCACTaGAGATTAAATGGGAGGGTTTCAGTACATCCGCAG +
Preference number: 6 (lower is better)
Translates to: DFYWTVSSTLLH*RLNGRVSVHPQ
Trigger: CTGCGGATGTACTGAAACCCTCCCATTTAATCTGCAGTGGAGGAGAGTGGAGCTCACTGTCCAGTAGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000558456.5
ENST00000558808.5
ENST00000559069.1
ENST00000559806.5
ENST00000560158.6
CDS CAA 90 bp GTGTCCTTGCCATTATGTAGCTTTCAATCTAGCAGACTTGCCTACTaGAGTAGTTTCTTTCAAGGTCATGTTGTAAAAGTCTACCGGGGA +
Preference number: 6 (lower is better)
Translates to: VSLPLCSFQSSRLAY*SSFFQGHVVKVYRG
Trigger: TCCCCGGTAGACTTTTACAACATGACCTTGAAAGAAACTACTCAAGTAGGCAAGTCTGCTAGATTGAAAGCTACATAATGGCAAGGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436542.6
CDS TCA 72 bp CTATTTAAACTGCAAGATCTTGAGAGCAGTCGAGTCTaGATGGAAAGAGTCAAGGAACTAGGATTCCCAGTA +
Preference number: 6 (lower is better)
Translates to: LFKLQDLESSRV*MERVKELGFPV
Trigger: TACTGGGAATCCTAGTTCCTTGACTCTTTCCATTCAGACTCGACTGCTCTCAAGATCTTGCAGTTTAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559469.5
CDS TCA 72 bp TCATCCAATGCACCATTGATGGAATCCATCCAATATTaGATTCTGGGTGACTCCTTCAGAGAATTAGGAAAC +
Preference number: 6 (lower is better)
Translates to: SSNAPLMESIQY*ILGDSFRELGN
Trigger: GTTTCCTAATTCTCTGAAGGAGTCACCCAGAATTCAATATTGGATGGATTCCATCAATGGTGCATTGGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559422.1
CDS CAA 90 bp GCCTTTCTTCTTCCTAGATATATTGTTAAAGCTGAGAAAGAGATGTaGGAGGCAGGGCAAATTATCCACATCTCTCTGGAAGAAAATAGA +
Preference number: 6 (lower is better)
Translates to: AFLLPRYIVKAEKEM*EAGQIIHISLEENR
Trigger: TCTATTTTCTTCCAGAGAGATGTGGATAATTTGCCCTGCCTCCAACATCTCTTTCTCAGCTTTAACAATATATCTAGGAAGAAGAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560158.6
CDS CAA 90 bp CACAGATATGTAGCCCTTGTCTTCCCAAATAAATCTACAAGCTCCTaGGGTGATGGACCTCATTTTACATTCTTTATATTCTTGGTAAAA +
Preference number: 6 (lower is better)
Translates to: HRYVALVFPNKSTSS*GDGPHFTFFIFLVK
Trigger: TTTTACCAAGAATATAAAGAATGTAAAATGAGGTCCATCACCCAAGGAGCTTGTAGATTTATTTGGGAAGACAAGGGCTACATATCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560691.5
CDS TCA 72 bp TTTAAGGTGATAACTTTAATTCATCCAATGCACCATTaGTGGAATCCATCCAATATTGAATTCTGGGTGACT +
Preference number: 6 (lower is better)
Translates to: FKVITLIHPMHH*WNPSNIEFWVT
Trigger: AGTCACCCAGAATTCAATATTGGATGGATTCCATCAATGGTGCATTGGATGAATTAAAGTTATCACCTTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559422.1