Pregenerated sensors for LRRC34 (Homo sapiens)
Ensembl gene IDs: ENSG00000171757Ensembl transcript IDs: ENST00000446859.7, ENST00000522080.5, ENST00000522526.6, ENST00000522596.6, ENST00000522830.5, ENST00000524054.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTTAGAAGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTaGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATATGTTTATAT | + |
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Preference number: 1 (lower is better) Translates to: GLEVRIVVMRGEWES*QHWLVGKGVCICLY Trigger: ATATAAACATATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACTTCTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATATGTCAACTTCTGAACTTTaGAACCCTTTGAAAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: RRVGELAALACWERGMYMSTSEL*NPLKVT Trigger: AGTGACTTTCAAAGGGTTTCAAAGTTCAGAAGTTGA...CATATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAAGTGGAGAGTGGGAGAGCTaGCAGCACTGGCTTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: FHLYKGQEQAKLLCGVRSGEWES*QHWLVG Trigger: CCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCC...ACTTCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAAGTGAGAGCTGGCAGCACTaGCTTGTTGGGAAAGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: FHLYKGQEQAKLLCGVRSESWQH*LVGKGV Trigger: TACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTC...ACTTCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAGTTAGATACCTACAATaGCCTTTACTTGTACGCTAT | + |
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Preference number: 2 (lower is better) Translates to: CFHLYKGQEQAKLLCGVRVRYLQ*PLLVRY Trigger: ATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAAC...TCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| 3UTR-3UTR CAA 90 bp | TATGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGCTGGCAGCACTGGCTaGTTGGGAAAGGGGTATGTA | + |
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Preference number: 3 (lower is better) Translates to: YASIYIKVKNRQNYSVGLAGSTG*LGKGYV Trigger: TACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGC...TAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| 3UTR-3UTR CAA 90 bp | TTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAAGTGGCAGCACTGGCTTGTaGGGAAAGGGGTATGTATAT | + |
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Preference number: 3 (lower is better) Translates to: FHLYKGQEQAKLLCGVRSGSTGL*GKGYVY Trigger: ATATACATACCCCTTTCCCAACAAGCCAGTGCTGCC...ACTTCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | AGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTGCGGCTGCGCTGCCATaGCGACCGCGCGCGCACTTA | + |
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Preference number: 4 (lower is better) Translates to: SQDSGYERRVGELAALACAAALP*RPRAHL Trigger: TAAGTGCGCGCGCGGTCGCCATGGCAGCGCAGCCGC...ACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | AGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTCTGGAGATTCGCGCTaGACCGCCAGGGCCGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQDSGYERRVGELAALACSGDSR*TARAAP Trigger: GGGCGCGGCCCTGGCGGTCCAGCGCGAATCTCCAGA...ACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | AGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATACCGCGCCCGGAGTACTaGCCTGAGTGGAGGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RGEWESWQHWLVGKGVCIPRPEY*PEWRPK Trigger: CTTGGGCCTCCACTCAGGCCAGTACTCCGGGCGCGG...TATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | AGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATAGAGTACTGGCCTGAGTaGAGGCCCAAGCCGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: RGEWESWQHWLVGKGVCIEYWPE*RPKPGT Trigger: GGTCCCCGGCTTGGGCCTCCACTCAGGCCAGTACTC...TATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR GCA 90 bp | AGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTGCGTCCTGGCTCCTTTaGAGGGAGGAGTTCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: SQDSGYERRVGELAALACASWLL*REEFPR Trigger: CCTCGGGAACTCCTCCCTGCAAAGGAGCCAGGACGC...ACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | AGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATATGTTTATGTCCGCCTGCAGCTGTaGGGCGGCTACACGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SGRAGSTGLLGKGYVYVYVRLQL*GGYTSL Trigger: GAGGCTCGTGTAGCCGCCTCACAGCTGCAGGCGGAC...ATAAACATATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | AGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATACTGGAGACCAGATTCTaGAGATTCGCGCTGGACCGC | + |
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Preference number: 4 (lower is better) Translates to: RGEWESWQHWLVGKGVCILETRF*RFALDR Trigger: GCGGTCCAGCGCGAATCTCCAGAATCTGGTCTCCAG...TATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | AGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATATGGTTATGAGAGGAGAGTaGGAGAGCTGGCAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: RRVGELAALACWERGMYMVMRGE*ESWQHW Trigger: CCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAAC...CATATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | TATGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGCTCCTCTCACCCACTaGCCGCGGCGGCTGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YASIYIKVKNRQNYSVGLAPLTH*PRRLRC Trigger: GCAGCGCAGCCGCCGCGGCCAGTGGGTGAGAGGAGC...TAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | TTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAAGTCCCGGAGTACTGGCCTaGGTGGAGGCCCAAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FHLYKGQEQAKLLCGVRSPGVLA*VEAQAG Trigger: CCCGGCTTGGGCCTCCACTCAGGCCAGTACTCCGGG...ACTTCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGTTAGATACCTACAATGACCTTTACTTGTACGCTATTTCACTACTTGGTCCCGCTGGCTGTGCCTaGCCGGGCCCTGAGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: FQLDTYNDLYLYAISLLGPAGCA*PGPEAS Trigger: TGAGGCCTCAGGGCCCGGGCAGGCACAGCCAGCGGG...ACCAAGTAGTGAAATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAACTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | TATGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTATGCTTCGAGTCCCGCTaGCTGTGCCTGCCCGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: YASIYIKVKNRQNYSVGLCFESR*LCLPGP Trigger: GGGCCCGGGCAGGCACAGCCAGCGGGACTCGAAGCA...TAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | TTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAAGTGAGGGGCTCCGCTGCTaGGCTAGGGCTGGGGCTACA | + |
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Preference number: 4 (lower is better) Translates to: FHLYKGQEQAKLLCGVRSEGLRC*ARAGAT Trigger: TGTAGCCCCAGCCCTAGCTCAGCAGCGGAGCCCCTC...ACTTCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | TATGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTATGCCTGCCCGGGCCCTaGGGCCTCACTGCTAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YASIYIKVKNRQNYSVGLCLPGP*GLTAKA Trigger: TGCCTTAGCAGTGAGGCCTCAGGGCCCGGGCAGGCA...TAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGTTAGATACCTACAATGACCTTTACTTGTACGCTATTTCACTACTTGGTGCCTCGGCGCCAGCCTaGTTCGAGTCCCGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FQLDTYNDLYLYAISLLGASAPA*FESRWL Trigger: CAGCCAGCGGGACTCGAAGCAGGCTGGCGCCGAGGC...ACCAAGTAGTGAAATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAACTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR GCA 90 bp | AGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATAGCCATTGGAGACTTCTaGAAGATATACACGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: RGEWESWQHWLVGKGVCIAIGDF*KIYTSI Trigger: GATGGACGTGTATATCTTGCAGAAGTCTCCAATGGC...TATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | AGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTACACCATTCCATCATaGGTTATTTTGTTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SQDSGYERRVGELAALACYTIPS*VILLQL Trigger: CAGCTGCAACAAAATAACTCATGATGGAATGGTGTA...ACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | AGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTCAACTTCTGAACTTTaGAACCCTTTGAAAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: SQDSGYERRVGELAALACSTSEL*NPLKVT Trigger: AGTGACTTTCAAAGGGTTTCAAAGTTCAGAAGTTGA...ACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | TATGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGGAGAGTGGGAGAGCTaGCAGCACTGGCTTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: YASIYIKVKNRQNYSVGLGEWES*QHWLVG Trigger: CCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCC...TAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR GCA 90 bp | TTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAAGTCACTTACAGTCCGCCTaGAGCTGTGAGGCGGCTACA | + |
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Preference number: 4 (lower is better) Translates to: FHLYKGQEQAKLLCGVRSHLQSA*SCEAAT Trigger: TGTAGCCGCCTCACAGCTGCAGGCGGACTGTAAGTG...ACTTCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGTTAGATACCTACAATGACCTTTACTTGTACGCTATTTCACTACTTGGTTCACTGCTAAGGCAGTaGCCGCCTACTCTGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FQLDTYNDLYLYAISLLGSLLRQ*PPTLWR Trigger: CCTCCACAGAGTAGGCGGTCACTGCCTTAGCAGTGA...ACCAAGTAGTGAAATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAACTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | TATGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAGAGCTGGCAGCACTaGCTTGTTGGGAAAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: YASIYIKVKNRQNYSVGLESWQH*LVGKGV Trigger: TACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTC...TAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CCA 90 bp | TGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAGCAGCACTGGCTTGTTaGGAAAGGGGTATGTATATG | + |
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Preference number: 4 (lower is better) Translates to: CFHLYKGQEQAKLLCGVRAALAC*ERGMYM Trigger: CATATACATACCCCTTTCCCAACAAGCCAGTGCTGC...TCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | TATGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTATTATTTTGTTGCAGCTaGCATCAAGGTAGCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: YASIYIKVKNRQNYSVGLLFCCS*HQGSAG Trigger: GCCTGCGCTACCTTGATGTCAGCTGCAACAAAATAA...TAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | CAGTTAGATACCTACAATGACCTTTACTTGTACGCTATTTCACTACTTGGTTATCTACAAAGAAGATTATaGCAAAGCCCGCTCCTACAA | + |
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Preference number: 4 (lower is better) Translates to: QLDTYNDLYLYAISLLGYLQRRL*QSPLLQ Trigger: TTGTAGGAGCGGGCTTTGTCATAATCTTCTTTGTAG...ATAACCAAGTAGTGAAATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | CAGTTAGATACCTACAATGACCTTTACTTGTACGCTATTTCACTACTTGGTTATAAAACCTGCATTAGATaGGTGGTCATAAGATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QLDTYNDLYLYAISLLGYKTCIR*VVIRFS Trigger: GGAGAATCTTATGACCACTCATCTAATGCAGGTTTT...ATAACCAAGTAGTGAAATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR TCA 90 bp | CAGTTAGATACCTACAATGACCTTTACTTGTACGCTATTTCACTACTTGGTTATGTTAGATACCTACAATaGCCTTTACTTGTACGCTAT | + |
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Preference number: 4 (lower is better) Translates to: QLDTYNDLYLYAISLLGYVRYLQ*PLLVRY Trigger: ATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAAC...ATAACCAAGTAGTGAAATAGCGTACAAGTAAAGGTCATTGTAGGTATCTAACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS CCA 90 bp | AGCCGCGCTGGACCGCCAGGGCCGCGCCCGGAGTACTGGCCTGAGTaGAGGCCCAAGCCGGGGACCTGGCCGGCGCACGGGCGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SRAGPPGPRPEYWPE*RPKPGTWPAHGRPP Trigger: GGGAGGCCGCCCGTGCGCCGGCCAGGTCCCCGGCTTGGGCCTCCACTCAGGCCAGTACTCCGGGCGCGGCCCTGGCGGTCCAGCGCGGCT 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524054.5 |
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| CDS TCA 90 bp | GGAGATTCGCGCTGGACCGCCAGGGCCGCGCCCGGAGTACTGGCCTaGGTGGAGGCCCAAGCCGGGGACCTGGCCGGCGCACGGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GDSRWTARAAPGVLA*VEAQAGDLAGARAA Trigger: GGCCGCCCGTGCGCCGGCCAGGTCCCCGGCTTGGGCCTCCACTCAGGCCAGTACTCCGGGCGCGGCCCTGGCGGTCCAGCGCGAATCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522080.5 ENST00000522526.6 |
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| CDS CCA 90 bp | ATTCGCGCTGGACCGCCAGGGCCGCGCCCGGAGTACTGGCCTGAGTaGAGGCCCAAGCCGGGGACCTGGCCGGCGCACGGGCGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: IRAGPPGPRPEYWPE*RPKPGTWPAHGRPP Trigger: GGGAGGCCGCCCGTGCGCCGGCCAGGTCCCCGGCTTGGGCCTCCACTCAGGCCAGTACTCCGGGCGCGGCCCTGGCGGTCCAGCGCGAAT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522080.5 ENST00000522526.6 |
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| CDS CCA 90 bp | CCTGCTGCTAGCCGCGCTGGACCGCCAGGGCCGCGCCCGGAGTACTaGCCTGAGTGGAGGCCCAAGCCGGGGACCTGGCCGGCGCACGGG | + |
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Preference number: 5 (lower is better) Translates to: PAASRAGPPGPRPEY*PEWRPKPGTWPAHG Trigger: CCCGTGCGCCGGCCAGGTCCCCGGCTTGGGCCTCCACTCAGGCCAGTACTCCGGGCGCGGCCCTGGCGGTCCAGCGCGGCTAGCAGCAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524054.5 |
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| CDS CCA 90 bp | CGCACGGGCGGCCTCCCGGGAGCTCCCCATGCTCCTCTCACCCACTaGCCGCGGCGGCTGCGCTGCCATGGCGACCGCGCGCGCACTTAC | + |
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Preference number: 5 (lower is better) Translates to: RTGGLPGAPHAPLTH*PRRLRCHGDRARTY Trigger: GTAAGTGCGCGCGCGGTCGCCATGGCAGCGCAGCCGCCGCGGCCAGTGGGTGAGAGGAGCATGGGGAGCTCCCGGGAGGCCGCCCGTGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS CCA 90 bp | ATTCTGGAGATTCGCGCTGGACCGCCAGGGCCGCGCCCGGAGTACTaGCCTGAGTGGAGGCCCAAGCCGGGGACCTGGCCGGCGCACGGG | + |
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Preference number: 5 (lower is better) Translates to: ILEIRAGPPGPRPEY*PEWRPKPGTWPAHG Trigger: CCCGTGCGCCGGCCAGGTCCCCGGCTTGGGCCTCCACTCAGGCCAGTACTCCGGGCGCGGCCCTGGCGGTCCAGCGCGAATCTCCAGAAT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522080.5 ENST00000522526.6 |
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| CDS GCA 90 bp | GCGGCTGCGCTGCCATGGCGACCGCGCGCGCACTTACAGTCCGCCTaGAGCTGTGAGGCGGCTACACGAGCCTCGGCGCCAGCCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: AAALPWRPRAHLQSA*SCEAATRASAPACF Trigger: GAAGCAGGCTGGCGCCGAGGCTCGTGTAGCCGCCTCACAGCTGCAGGCGGACTGTAAGTGCGCGCGCGGTCGCCATGGCAGCGCAGCCGC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS GCA 90 bp | GGAGCTCCCCATGCTCCTCTCACCCACTGGCCGCGGCGGCTGCGCTaGCATGGCGACCGCGCGCGCACTTACAGTCCGCCTGCAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GAPHAPLTHWPRRLR*HGDRARTYSPPAAV Trigger: CACAGCTGCAGGCGGACTGTAAGTGCGCGCGCGGTCGCCATGGCAGCGCAGCCGCCGCGGCCAGTGGGTGAGAGGAGCATGGGGAGCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS CCA 90 bp | TCCCCATGCTCCTCTCACCCACTGGCCGCGGCGGCTGCGCTGCCATaGCGACCGCGCGCGCACTTACAGTCCGCCTGCAGCTGTGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: SPCSSHPLAAAAALP*RPRAHLQSACSCEA Trigger: CGCCTCACAGCTGCAGGCGGACTGTAAGTGCGCGCGCGGTCGCCATGGCAGCGCAGCCGCCGCGGCCAGTGGGTGAGAGGAGCATGGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS TCA 90 bp | GCTGCCATGGCGACCGCGCGCGCACTTACAGTCCGCCTGCAGCTGTaGGGCGGCTACACGAGCCTCGGCGCCAGCCTGCTTCGAGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: AAMATARALTVRLQL*GGYTSLGASLLRVP Trigger: CGGGACTCGAAGCAGGCTGGCGCCGAGGCTCGTGTAGCCGCCTCACAGCTGCAGGCGGACTGTAAGTGCGCGCGCGGTCGCCATGGCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS TCA 90 bp | ACTCTGTGGAGGTCCTTTGTCACCCTGCCCTGGTTAAAGGCAGCCTaGGGGAGGGCGTCCTGGCTCCTTTGCAGGGAGGAGTTCCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: TLWRSFVTLPWLKAA*GRASWLLCREEFPR Trigger: CCTCGGGAACTCCTCCCTGCAAAGGAGCCAGGACGCCCTCCCTCAGGCTGCCTTTAACCAGGGCAGGGTGACAAAGGACCTCCACAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522526.6 ENST00000522830.5 |
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| CDS TCA 90 bp | AGGGGCTCCGCTGCTGAGCTAGGGCTGGGGCTACAAAGAAGATTATaGCAAAGCCCGCTCCTACAAAGTGTGCACCGGCCTGCCGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RGSAAELGLGLQRRL*QSPLLQSVHRPAGP Trigger: TGGCCCGGCAGGCCGGTGCACACTTTGTAGGAGCGGGCTTTGTCATAATCTTCTTTGTAGCCCCAGCCCTAGCTCAGCAGCGGAGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522526.6 ENST00000522830.5 |
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| CDS-3UTR CAA 90 bp | AGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATATGGGCGTCCTGGCTCCTTaGCAGGGAGGAGTTCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: RRVGELAALACWERGMYMGVLAP*QGGVPE Trigger: CTCGGGAACTCCTCCCTGCAAAGGAGCCAGGACGCC...CATATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS TCA 90 bp | CTCCTTTGCAGGGAGGAGTTCCCGAGGTTTGAGGGGCTCCGCTGCTaGGCTAGGGCTGGGGCTACAAAGAAGATTATGACAAAGCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: LLCREEFPRFEGLRC*ARAGATKKIMTKPA Trigger: AGCGGGCTTTGTCATAATCTTCTTTGTAGCCCCAGCCCTAGCTCAGCAGCGGAGCCCCTCAAACCTCGGGAACTCCTCCCTGCAAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522526.6 ENST00000522830.5 |
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| CDS CCA 90 bp | CGAAGAAGCAGAGTAGCATCAGCACATGATAAAGGCGTTGGGCTTTaGGAGCATAAAGGGTTTTGTGCTCCCAAAGGGCGGGGCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: RRSRVASAHDKGVGL*EHKGFCAPKGRGHQ Trigger: CTGGTGGCCCCGCCCTTTGGGAGCACAAAACCCTTTATGCTCCCAAAGCCCAACGCCTTTATCATGTGCTGATGCTACTCTGCTTCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522526.6 |
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| CDS-3UTR CAA 90 bp | AGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATATGACTTCCAGGGTAGTGTaGCTTTTCAGTACATCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RRVGELAALACWERGMYMTSRVV*LFSTSA Trigger: GGCTGATGTACTGAAAAGCAACACTACCCTGGAAGT...CATATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CAA 90 bp | AGTGGGAGAGCTGGCAGCACTGGCTTGTTGGGAAAGGGGTATGTATATGTTTATGCTGGCAGCACTGGCTaGTTGGGAAAGGGGTATGTA | + |
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Preference number: 5 (lower is better) Translates to: SGRAGSTGLLGKGYVYVYAGSTG*LGKGYV Trigger: TACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGC...ATAAACATATACATACCCCTTTCCCAACAAGCCAGTGCTGCCAGCTCTCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CAA 90 bp | AGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTACTGGCACTAAGCGATaGTTACCAGCAATGTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: SQDSGYERRVGELAALACTGTKR*LPAMFN Trigger: ATTAAACATTGCTGGTAACAATCGCTTAGTGCCAGT...ACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CAA 90 bp | AGTCAGGATAGTGGTTATGAGAGGAGAGTGGGAGAGCTGGCAGCACTGGCTTGTGTAAATGAGATTAAGTaGTTTCTGAAGCAGTTTCGC | + |
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Preference number: 5 (lower is better) Translates to: SQDSGYERRVGELAALACVNEIK*FLKQFR Trigger: GCGAAACTGCTTCAGAAACAACTTAATCTCATTTAC...ACAAGCCAGTGCTGCCAGCTCTCCCACTCTCCTCTCATAACCACTATCCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS-3UTR CAA 90 bp | TGCTTCCATTTATATAAAGGTCAAGAACAGGCAAAACTACTCTGTGGGGTTAGAGGCAGCACTGGCTTGTaGGGAAAGGGGTATGTATAT | + |
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Preference number: 5 (lower is better) Translates to: CFHLYKGQEQAKLLCGVRGSTGL*GKGYVY Trigger: ATATACATACCCCTTTCCCAACAAGCCAGTGCTGCC...TCTAACCCCACAGAGTAGTTTTGCCTGTTCTTGACCTTTATATAAATGGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446859.7 |
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| CDS TCA 72 bp | CGCTGGACCGCCAGGGCCGCGCCCGGAGTACTGGCCTaGGTGGAGGCCCAAGCCGGGGACCTGGCCGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RWTARAAPGVLA*VEAQAGDLAGA Trigger: TGCGCCGGCCAGGTCCCCGGCTTGGGCCTCCACTCAGGCCAGTACTCCGGGCGCGGCCCTGGCGGTCCAGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000446859.7 ENST00000522080.5 ENST00000522526.6 ENST00000524054.5 |
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| CDS GCA 72 bp | AGCTGTGAGGCGGCTACACGAGCCTCGGCGCCAGCCTaGTTCGAGTCCCGCTGGCTGTGCCTGCCCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SCEAATRASAPA*FESRWLCLPGP Trigger: GGGCCCGGGCAGGCACAGCCAGCGGGACTCGAAGCAGGCTGGCGCCGAGGCTCGTGTAGCCGCCTCACAGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000446859.7 ENST00000522526.6 ENST00000522596.6 ENST00000522830.5 |
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| CDS CCA 72 bp | TCCTCTCACCCACTGGCCGCGGCGGCTGCGCTGCCATaGCGACCGCGCGCGCACTTACAGTCCGCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSHPLAAAAALP*RPRAHLQSACS Trigger: GCTGCAGGCGGACTGTAAGTGCGCGCGCGGTCGCCATGGCAGCGCAGCCGCCGCGGCCAGTGGGTGAGAGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS GCA 72 bp | CATGCTCCTCTCACCCACTGGCCGCGGCGGCTGCGCTaGCATGGCGACCGCGCGCGCACTTACAGTCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: HAPLTHWPRRLR*HGDRARTYSPP Trigger: AGGCGGACTGTAAGTGCGCGCGCGGTCGCCATGGCAGCGCAGCCGCCGCGGCCAGTGGGTGAGAGGAGCATG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS TCA 72 bp | GCGACCGCGCGCGCACTTACAGTCCGCCTGCAGCTGTaGGGCGGCTACACGAGCCTCGGCGCCAGCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ATARALTVRLQL*GGYTSLGASLL Trigger: AAGCAGGCTGGCGCCGAGGCTCGTGTAGCCGCCTCACAGCTGCAGGCGGACTGTAAGTGCGCGCGCGGTCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS GCA 72 bp | CTGCCATGGCGACCGCGCGCGCACTTACAGTCCGCCTaGAGCTGTGAGGCGGCTACACGAGCCTCGGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LPWRPRAHLQSA*SCEAATRASAP Trigger: TGGCGCCGAGGCTCGTGTAGCCGCCTCACAGCTGCAGGCGGACTGTAAGTGCGCGCGCGGTCGCCATGGCAG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446859.7 ENST00000522526.6 |
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| CDS CAA 90 bp | GAGGGAGGGCGTCCTGGCTCCTTTGCAGGGAGGAGTTCCCGAGGTTaGAGGGGCTCCGCTGCTGAGCTAGGGCTGGGGCTACAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: EGGRPGSFAGRSSRG*RGSAAELGLGLQRR Trigger: TCTTCTTTGTAGCCCCAGCCCTAGCTCAGCAGCGGAGCCCCTCAAACCTCGGGAACTCCTCCCTGCAAAGGAGCCAGGACGCCCTCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522526.6 ENST00000522830.5 |
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| CDS TCA 72 bp | GAGACCAGATTCTGGAGATTAGTCCGCCTGCAGCTGTaGGGCGGCTACACGAGCCTCGGCGCCAGCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ETRFWRLVRLQL*GGYTSLGASLL Trigger: AAGCAGGCTGGCGCCGAGGCTCGTGTAGCCGCCTCACAGCTGCAGGCGGACTAATCTCCAGAATCTGGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522596.6 ENST00000522830.5 |
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| CDS TCA 72 bp | AGGGAGGAGTTCCCGAGGTTTGAGGGGCTCCGCTGCTaGGCTAGGGCTGGGGCTACAAAGAAGATTATGACA | + |
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Preference number: 6 (lower is better) Translates to: REEFPRFEGLRC*ARAGATKKIMT Trigger: TGTCATAATCTTCTTTGTAGCCCCAGCCCTAGCTCAGCAGCGGAGCCCCTCAAACCTCGGGAACTCCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000446859.7 ENST00000522526.6 ENST00000522830.5 |
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| CDS TCA 72 bp | TGTGTAACCATTTCTGAGGCACCTGTAAATAATATCTaGTGTTACAGAGATGATCCCAGAAAAAGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: CVTISEAPVNNI*CYRDDPRKSLQ Trigger: CTGAAGGCTTTTTCTGGGATCATCTCTGTAACATCAGATATTATTTACAGGTGCCTCAGAAATGGTTACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522596.6 |
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| CDS TCA 72 bp | ATTAGTTCCAGTTCCAGACTCAACTTATTCAGCTACTaGTGTGTAGAACCTAAAGAATTATGGATGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISSSSRLNLFSY*CVEPKELWMFF Trigger: GAAAAACATCCATAATTCTTTAGGTTCTACACATCAGTAGCTGAATAAGTTGAGTCTGGAACTGGAACTAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522596.6 |
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