Pregenerated sensors for LRR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165501Ensembl transcript IDs: ENST00000298288.11, ENST00000318317.8, ENST00000540712.1, ENST00000554869.5
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGGTGTGAGCGTTGAAACTGGTGTATCAACATTACAGCCTCTATaGGCCAGTCTCATAGCTGAAAGGAAACCTTTTAAACTGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: TGVSVETGVSTLQPL*ASLIAERKPFKLLE Trigger: TTCCAGCAGTTTAAAAGGTTTCCTTTCAGCTATGAGACTGGCTCATAGAGGCTGTAATGTTGATACACCAGTTTCAACGCTCACACCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540712.1 |
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| 3UTR TCA 90 bp | TCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTaGCGCTGCAAAATCATACATGCACCCCAAACTGATCTGTTATTG | + |
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Preference number: 1 (lower is better) Translates to: SSSPASIQKSSLTPI*RCKIIHAPQTDLLL Trigger: CAATAACAGATCAGTTTGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| 3UTR TCA 90 bp | CACAAATTTTTGCGGTATCCAAATCTTGGCAGAGATGGAATGGAATaGTATGAGAGCCATATGGAATCCTTTGGTACGGGATCTAGGATG | + |
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Preference number: 1 (lower is better) Translates to: HKFLRYPNLGRDGME*YESHMESFGTGSRM Trigger: CATCCTAGATCCCGTACCAAAGGATTCCATATGGCTCTCATATCATTCCATTCCATCTCTGCCAAGATTTGGATACCGCAAAAATTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| 3UTR CCA 90 bp | ACAAACACAAATTTTTGCGGTATCCAAATCTTGGCAGAGATGGAATaGAATGATATGAGAGCCATATGGAATCCTTTGGTACGGGATCTA | + |
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Preference number: 1 (lower is better) Translates to: TNTNFCGIQILAEME*NDMRAIWNPLVRDL Trigger: TAGATCCCGTACCAAAGGATTCCATATGGCTCTCATATCATTCCATTCCATCTCTGCCAAGATTTGGATACCGCAAAAATTTGTGTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| 3UTR TCA 90 bp | ACCACAGTGTGGGCAACAGAATGCAGATTCATGGTAGTAGTTCCTTaGATGAAAGAGTTCAGACAGAATCTTCCACAAACACAAATTTTT | + |
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Preference number: 1 (lower is better) Translates to: TTVWATECRFMVVVP*MKEFRQNLPQTQIF Trigger: AAAAATTTGTGTTTGTGGAAGATTCTGTCTGAACTCTTTCATTCAAGGAACTACTACCATGAATCTGCATTCTGTTGCCCACACTGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR GCA 90 bp | TTGAATGAAAGAGTTCAGACAGAATCTTCCACAAACACAAATTTTTaGGGTATCCAAATCTTGGCAGAGATGGAATGGAATGATATGAGA | + |
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Preference number: 1 (lower is better) Translates to: LNERVQTESSTNTNF*GIQILAEMEWNDMR Trigger: TCTCATATCATTCCATTCCATCTCTGCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTGAACTCTTTCATTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR CAA 90 bp | AAATTCTTAAGTTCCTGGAGCTGGCAAAACTGCACAGGGAGTGCCTaGATTTTGTTCTTGCTGAGGTCCAAACTCCGAAGTGACTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KFLSSWSWQNCTGSA*ILFLLRSKLRSDFW Trigger: CCAGAAGTCACTTCGGAGTTTGGACCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCAGTTTTGCCAGCTCCAGGAACTTAAGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAAGGCTTTTTAAGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGCACTGGTGTGAGCGTTaGAACTGGTGTATCAACATT | + |
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Preference number: 2 (lower is better) Translates to: FLRLFKQSIRISTRTSPQHWCER*NWCINI Trigger: AATGTTGATACACCAGTTTCAACGCTCACACCAGTG...CTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAAGCCTTAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCACTTATTTCGAGCTGCTaGCAAAAAGCGAAGGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: PPLQQVYRNLPLLQFDAALISSC*QKAKVY Trigger: ATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAG...TGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGAATCTTCCACAAACACAAATTTTTGCGGTATCCAAATCTTGGCAGAGAAGTCTTCACTGGTGTaGGCGTTGAAACTGGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: QTESSTNTNFCGIQILAEKSSLV*ALKLVY Trigger: ATACACCAGTTTCAACGCTCACACCAGTGAAGACTT...CTCTGCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | AAATTATCTACTAAGACCACAGTGTGGGCAACAGAATGCAGATTCATGGTAGTAGTCCAAACTCCGAAGTaGCTTCTGGAGTGTAGAATG | + |
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Preference number: 2 (lower is better) Translates to: KLSTKTTVWATECRFMVVVQTPK*LLECRM Trigger: CATTCTACACTCCAGAAGTCACTTCGGAGTTTGGAC...TACTACCATGAATCTGCATTCTGTTGCCCACACTGTGGTCTTAGTAGATAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR CAA 90 bp | CAGACAGAATCTTCCACAAACACAAATTTTTGCGGTATCCAAATCTaGGCAGAGATGGAATGGAATGATATGAGAGCCATATGGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: QTESSTNTNFCGIQI*AEMEWNDMRAIWNP Trigger: AGGATTCCATATGGCTCTCATATCATTCCATTCCATCTCTGCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | GTGATTGTCATTCAGGTTAAGTTCTTGAAGGTGTATGAGGTCTCCAATTGTAGCTCCCTTACTCCAATTTaGCGCTGCAAAATCATACAT | + |
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Preference number: 2 (lower is better) Translates to: VIVIQVKFLKVYEVSNCSSLTPI*RCKIIH Trigger: ATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGA...GCTACAATTGGAGACCTCATACACCTTCAAGAACTTAACCTGAATGACAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | TTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCCTATCTTGCAAGGAAACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: FELLTKSEGLLVVLSCKETCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...TTCCTTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCAAAGTCTTCACTGGTGTaGGCGTTGAAACTGGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSKSSLV*ALKLVY Trigger: ATACACCAGTTTCAACGCTCACACCAGTGAAGACTT...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR GCA 90 bp | GTGATTGTCATTCAGGTTAAGTTCTTGAAGGTGTATGAGGTCTCCAATTGTAGCAATTTGGTGAAGAATTaGTCAATGTTCTCCCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: VIVIQVKFLKVYEVSNCSNLVKN*SMFSLS Trigger: GCTAAGGGAGAACATTGAGCAATTCTTCACCAAATT...GCTACAATTGGAGACCTCATACACCTTCAAGAACTTAACCTGAATGACAATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540712.1 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: QQVYRNLPLLQFDAAKSYTCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...GTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTCAGACAGAATCTTCCACAAACACAAATTTTTGCGGTATCCAAATCTTGACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: RVQTESSTNTNFCGIQILTCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...CAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTGAACTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCAAGAGATGGAATGGAATaGTATGAGAGCCATATGGAA | + |
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Preference number: 2 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSRDGME*YESHME Trigger: TTCCATATGGCTCTCATATCATTCCATTCCATCTCT...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCAACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSTCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR CCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCATTGCAGCTTTATTACTaGAAGGACTTTTGGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSLQLYY*KDFWLF Trigger: GAACAACCAAAAGTCCTTCCAGTAATAAAGCTGCAA...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR CAA 90 bp | CTGGCAAAACTGCACAGGGAGTGCCTTGATTTTGTTCTTGCTGAGGTCCAAACTTTCCCTTACTCCAATTaGACGCTGCAAAATCATACA | + |
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Preference number: 3 (lower is better) Translates to: LAKLHRECLDFVLAEVQTFPYSN*TLQNHT Trigger: TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAA...AGTTTGGACCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCAGTTTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR TCA 72 bp | CTTGATTTTGTTCTTGCTGAGGTCCAAACTCCGAAGTaGCTTCTGGAGTGTAGAATGACACAAGGCTACACT | + |
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Preference number: 3 (lower is better) Translates to: LDFVLAEVQTPK*LLECRMTQGYT Trigger: AGTGTAGCCTTGTGTCATTCTACACTCCAGAAGTCACTTCGGAGTTTGGACCTCAGCAAGAACAAAATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR CCA 72 bp | TCAGTACCACCCAAATTATCTACTAAGACCACAGTGTaGGCAACAGAATGCAGATTCATGGTAGTAGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SVPPKLSTKTTV*ATECRFMVVVP Trigger: AGGAACTACTACCATGAATCTGCATTCTGTTGCCCACACTGTGGTCTTAGTAGATAATTTGGGTGGTACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR TCA 72 bp | CCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTaGCGCTGCAAAATCATACATGCACCCCAAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: PASIQKSSLTPI*RCKIIHAPQTD Trigger: ATCAGTTTGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR CAA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACTTCCCTTACTCCAATTaGACGCTGCAAAATCATACA | + |
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Preference number: 3 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDFPYSN*TLQNHT Trigger: TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAA...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| 3UTR TCA 72 bp | AGCGTTGAAACTGGTGTATCAACATTACAGCCTCTATaGGCCAGTCTCATAGCTGAAAGGAAACCTTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SVETGVSTLQPL*ASLIAERKPFK Trigger: TTTAAAAGGTTTCCTTTCAGCTATGAGACTGGCTCATAGAGGCTGTAATGTTGATACACCAGTTTCAACGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540712.1 |
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| 3UTR TCA 72 bp | TGGGCAACAGAATGCAGATTCATGGTAGTAGTTCCTTaGATGAAAGAGTTCAGACAGAATCTTCCACAAACA | + |
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Preference number: 3 (lower is better) Translates to: WATECRFMVVVP*MKEFRQNLPQT Trigger: TGTTTGTGGAAGATTCTGTCTGAACTCTTTCATTCAAGGAACTACTACCATGAATCTGCATTCTGTTGCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR-3UTR CAA 90 bp | GTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCTTTAATTCAGGTTAAGTTCTaGAAGGTGTATGAGGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: VIWFVQKIPIKLMVLAALIQVKF*KVYEVS Trigger: GGAGACCTCATACACCTTCAAGAACTTAACCTGAAT...TAAAGCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| 3UTR CCA 72 bp | AATTCATTATCGTCAAGTTTTAAATTCTTAAGTTCCTaGAGCTGGCAAAACTGCACAGGGAGTGCCTTGATT | + |
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Preference number: 3 (lower is better) Translates to: NSLSSSFKFLSS*SWQNCTGSALI Trigger: AATCAAGGCACTCCCTGTGCAGTTTTGCCAGCTCCAGGAACTTAAGAATTTAAAACTTGACGATAATGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CCA 90 bp | ACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCCACCGGGACTGACCACCTaGATCCGGGCTCGCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: TEIFPYSNLTLQNHTCTPPGLTT*IRARAR Trigger: CCGGGCGCGAGCCCGGATCCAGGTGGTCAGTCCCGG...TGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318317.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAGTTGCGTACCGGGACTaGCCACCTGGATCCGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLSSKYTEIFPYSNLTLQVAYRD*PPGSGL Trigger: GAGCCCGGATCCAGGTGGTCAGTCCCGGTACGCAAC...TTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318317.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAAGGCTTTTTAAGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGCCCAAGGCGGGCAAGTaGCGGCTGATCACCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: FLRLFKQSIRISTRTSPQPKAGK*RLITST Trigger: GGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGG...CTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAAGCCTTAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAAACGCGGGCTGCCCACTaGTCTGCCTGCCTGTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: PLQQVYRNLPLLQFDAAKTRAAH*SACLLD Trigger: GTCCAACAGGCAGGCAGATCAGTGGGCAGCCCGCGT...TTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
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| CDS-3UTR GCA 90 bp | ATTGTCATTCAGGTTAAGTTCTTGAAGGTGTATGAGGTCTCCAATTGTAGCTGGCCCAAGGCGGGCAAGTaGCGGCTGATCACCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: IVIQVKFLKVYEVSNCSWPKAGK*RLITST Trigger: GGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGG...CCAGCTACAATTGGAGACCTCATACACCTTCAAGAACTTAACCTGAATGACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CCA 90 bp | TTTTTAAGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGCCTGCCTGTTGGACTaGTCCGCGACTCGGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FLSKAYAYQLGQAHSKKSACLLD*SATRAV Trigger: GACAGCCCGAGTCGCGGACCAGTCCAACAGGCAGGC...AGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| CDS-3UTR CCA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGATCTGCCTGCCTGTTaGACTGGTCCGCGACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDDLPAC*TGPRLG Trigger: CCCGAGTCGCGGACCAGTCCAACAGGCAGGCAGATC...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAACGTCAAGCTGGCTTTaGAACTTCCTCCTTCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PPLQQVYRNLPLLQFDAATSSWL*NFLLPA Trigger: GGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGT...TGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR TCA 90 bp | CTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAACTCCTGGAAGTCTGCTaGCAGAGGCTCAACACGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLSSKYTEIFPYSNLTLQLLEVC*QRLNTA Trigger: AGCCGTGTTGAGCCTCTGTCAGCAGACTTCCAGGAG...TTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR TCA 90 bp | AAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGAAGATGTTAGCACCGTGTCTGTATaGAGCCCGCGGGAAACGGCT | + |
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Preference number: 4 (lower is better) Translates to: KAYAYQLGQAHSKKSEDVSTVSV*SPRETA Trigger: AGCCGTTTCCCGCGGGCTTCATACAGACACGGTGCT...AACATCTTCAGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| CDS-3UTR GCA 90 bp | TTTTTAAGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGGTTCTCGCCGTGGTTaGGTACCGGGACTGACCACC | + |
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Preference number: 4 (lower is better) Translates to: FLSKAYAYQLGQAHSKKSGSRRG*VPGLTT Trigger: GGTGGTCAGTCCCGGTACGCAACCACGGCGAGAACC...AGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| CDS-3UTR GCA 90 bp | TTATGTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCCTCGCGCACGCGGGCTaGCCACTGATCTGCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LCNMVRAEDSNKVNGACSLAHAG*PLICLP Trigger: AGGCAGGCAGATCAGTGGGCAGCCCGCGTGCGCGAG...GCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| CDS-3UTR CCA 90 bp | TTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCCTATCTTGCAAGGAAGATCTGCCTGCCTGTTaGACTGGTCCGCGACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: FELLTKSEGLLVVLSCKEDLPAC*TGPRLG Trigger: CCCGAGTCGCGGACCAGTCCAACAGGCAGGCAGATC...TTCCTTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| CDS-3UTR TCA 90 bp | ATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTCTCCTGGAAGTCTGCTaGCAGAGGCTCAACACGGCT | + |
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Preference number: 4 (lower is better) Translates to: IPPLQQVYRNLPLLQFDALLEVC*QRLNTA Trigger: AGCCGTGTTGAGCCTCTGTCAGCAGACTTCCAGGAG...AGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR GCA 90 bp | CAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCCCAAGGCGGGCAAGTaGCGGCTGATCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLPLLQFDAAKSYMPKAGK*RLITST Trigger: GGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGG...CATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | TATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCGGTTCTCGCCGTGGTTaGGTACCGGGACTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: YTEIFPYSNLTLQNHTCTGSRRG*VPGLTT Trigger: GGTGGTCAGTCCCGGTACGCAACCACGGCGAGAACC...GGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACTCGCGCACGCGGGCTaGCCACTGATCTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSLAHAG*PLICLP Trigger: AGGCAGGCAGATCAGTGGGCAGCCCGCGTGCGCGAG...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | AAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCGCCTGCCTGTTGGACTaGTCCGCGACTCGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KYTEIFPYSNLTLQNHTCACLLD*SATRAV Trigger: GACAGCCCGAGTCGCGGACCAGTCCAACAGGCAGGC...GCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| 3UTR CAA 72 bp | TGGCAAAACTGCACAGGGAGTGCCTTGATTTTGTTCTaGCTGAGGTCCAAACTCCGAAGTGACTTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQNCTGSALILF*LRSKLRSDFWS Trigger: ACTCCAGAAGTCACTTCGGAGTTTGGACCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCAGTTTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCAGCACCGTGTCTGTATaGAGCCCGCGGGAAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTEIFPYSNLTLQNHTCTSTVSV*SPRETA Trigger: AGCCGTTTCCCGCGGGCTTCATACAGACACGGTGCT...GGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CGCTGCAAAATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTACGCGGGCTGCCCACTaGTCTGCCTGCCTGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RCKIIHAPQTDLLLKFLFTRAAH*SACLLD Trigger: GTCCAACAGGCAGGCAGATCAGTGGGCAGCCCGCGT...AAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGATTTTGCAGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACCCAAGGCGGGCAAGTaGCGGCTGATCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSPKAGK*RLITST Trigger: GGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGG...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | CGCTGCAAAATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTGCCGGGTTCTCGCCGTaGTTGCGTACCGGGACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RCKIIHAPQTDLLLKFLFAGFSP*LRTGTD Trigger: GTCAGTCCCGGTACGCAACCACGGCGAGAACCCGGC...AAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGATTTTGCAGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCAGCCGGGTTCTCGCCGTaGTTGCGTACCGGGACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSAGFSP*LRTGTD Trigger: GTCAGTCCCGGTACGCAACCACGGCGAGAACCCGGC...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | CAGACAGAATCTTCCACAAACACAAATTTTTGCGGTATCCAAATCTTGGCAGAGTCCATTAGCCTGGGGTaGGCACACCTCCCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTESSTNTNFCGIQILAESISLG*AHLPVG Trigger: ACCTACTGGGAGGTGTGCCCACCCCAGGCTAATGGA...CTCTGCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGGCTGGAAATGGCCTGTaGGTTGCAGTGAACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLSSKYTEIFPYSNLTLAGNGL*VAVNQA Trigger: AGCTTGGTTCACTGCAACCCACAGGCCATTTCCAGC...CAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TTTTTAAGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTACGTCAAGCTGGCTTTaGAACTTCCTCCTTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSKAYAYQLGQAHSKKSTSSWL*NFLLPA Trigger: GGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGT...AGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCAACGTCAAGCTGGCTTTaGAACTTCCTCCTTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSTSSWL*NFLLPA Trigger: GGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGT...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACGGGCAAGTGCCGGCTaGTCACCTCCACCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSRASAG*SPPPHS Trigger: ACTGTGAGGTGGAGGTGATCAGCCGGCACTTGCCCG...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCCATGGAGCTGGCAAAACTaGACAGGGAGTGCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TEIFPYSNLTLQNHTCTPWSWQN*TGSALI Trigger: AATCAAGGCACTCCCTGTGCAGTTTTGCCAGCTCCA...TGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | GGCAAAAATGGAAGCTTATTTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTCCAAGCTCTTCCCACTaGACTCCAACCTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GKNGSLFRAADKKRRFISPSSSH*TPTWVT Trigger: TGTCACCCAGGTTGGAGTGCAGTGGGAAGAGCTTGG...ACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAGCTTCCATTTTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACTCCTGGAAGTCTGCTaGCAGAGGCTCAACACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSLLEVC*QRLNTA Trigger: AGCCGTGTTGAGCCTCTGTCAGCAGACTTCCAGGAG...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGAAGCTTATTTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCTCCTGGAAGTCTGCTaGCAGAGGCTCAACACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNGSLFRAADKKRRFISCLLEVC*QRLNTA Trigger: AGCCGTGTTGAGCCTCTGTCAGCAGACTTCCAGGAG...ACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAGCTTCCATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCACTGGTGTGAGCGTTaGAACTGGTGTATCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: FLLSSKYTEIFPYSNLTLHWCER*NWCINI Trigger: AATGTTGATACACCAGTTTCAACGCTCACACCAGTG...CAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCATTCAGGTTAAGTTCTTaGAGGTGTATGAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLQQVYRNLPLLQFDAAFRLSS*RCMRSP Trigger: TGGAGACCTCATACACCTTCAAGAACTTAACCTGAA...TGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTGGCAAAACTGCACAGGGAGTGCCTTGATTTTGTTCTTGCTGAGGTCCAAACTATGGTAGTAGTTCCTTaGATGAAAGAGTTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LAKLHRECLDFVLAEVQTMVVVP*MKEFRQ Trigger: CTGTCTGAACTCTTTCATTCAAGGAACTACTACCAT...AGTTTGGACCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCAGTTTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAGCGGTATCCAAATCTTaGCAGAGATGGAATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLSSKYTEIFPYSNLTLQAVSKS*QRWNGM Trigger: CATTCCATTCCATCTCTGCCAAGATTTGGATACCGC...TTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CCA 90 bp | GCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGAAGATGTTCCAGATATGAGAGCCATATaGAATCCTTTGGTACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AYAYQLGQAHSKKSEDVPDMRAI*NPLVRD Trigger: ATCCCGTACCAAAGGATTCCATATGGCTCTCATATC...TGGAACATCTTCAGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCAACGTCAAGCTGGCTTTaGAACTTCCTCCTTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSTSSWL*NFLLPA Trigger: GGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGT...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AGATATCCACAGGAGGCTCCTTTAACCGAACAGTGGCTTTCCCCTCATCTACAACTAAATGACTCCAAGTaGTTGTCATTCAGGTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RYPQEAPLTEQWLSPHLQLNDSK*LSFRLS Trigger: ACTTAACCTGAATGACAATCACTTGGAGTCATTTAG...TTGTAGATGAGGGGAAAGCCACTGTTCGGTTAAAGGAGCCTCCTGTGGATATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR GCA 90 bp | ATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACCCTGGAGCTGGCAAAACTaGACAGGGAGTGCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: IHAPQTDLLLKFLFLVSPWSWQN*TGSALI Trigger: AATCAAGGCACTCCCTGTGCAGTTTTGCCAGCTCCA...GGGTGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | TATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCTGGAGCTGGCAAAACTaGACAGGGAGTGCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: YTEIFPYSNLTLQNHTCTWSWQN*TGSALI Trigger: AATCAAGGCACTCCCTGTGCAGTTTTGCCAGCTCCA...GGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | TATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCAAATGGCCTGTGGGTTaGAGTGAACCAAGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTEIFPYSNLTLQNHTCTKWPVG*SEPSSS Trigger: GGAAGAGCTTGGTTCACTGCAACCCACAGGCCATTT...GGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGAAGATGTTGCGGTATCCAAATCTTaGCAGAGATGGAATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KAYAYQLGQAHSKKSEDVAVSKS*QRWNGM Trigger: CATTCCATTCCATCTCTGCCAAGATTTGGATACCGC...AACATCTTCAGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCGGTATCCAAATCTTaGCAGAGATGGAATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDAVSKS*QRWNGM Trigger: CATTCCATTCCATCTCTGCCAAGATTTGGATACCGC...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | GAGATGGAATGGAATGATATGAGAGCCATATGGAATCCTTTGGTACGGGATCTATTAAACTGCTGGAAATaGCCTGTGGGTTGCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EMEWNDMRAIWNPLVRDLLNCWK*PVGCSE Trigger: TTCACTGCAACCCACAGGCCATTTCCAGCAGTTTAA...TAGATCCCGTACCAAAGGATTCCATATGGCTCTCATATCATTCCATTCCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCCTATCTTGCAAGGAAACATTACAGCCTCTATaGGCCAGTCTCATAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FELLTKSEGLLVVLSCKETLQPL*ASLIAE Trigger: TTCAGCTATGAGACTGGCTCATAGAGGCTGTAATGT...TTCCTTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | GGCAAAAATGGAAGCTTATTTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTGTCCAAACTCCGAAGTaGCTTCTGGAGTGTAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GKNGSLFRAADKKRRFISVQTPK*LLECRM Trigger: CATTCTACACTCCAGAAGTCACTTCGGAGTTTGGAC...ACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAGCTTCCATTTTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAGAGATGGAATGGAATaGTATGAGAGCCATATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSKYTEIFPYSNLTLQRDGME*YESHME Trigger: TTCCATATGGCTCTCATATCATTCCATTCCATCTCT...TTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | ATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGTGTGGGCAACAGAATaGAGATTCATGGTAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPPLQQVYRNLPLLQFDAVWATE*RFMVVV Trigger: AACTACTACCATGAATCTGCATTCTGTTGCCCACAC...AGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCCAGTGTGGGCAACAGAATaGAGATTCATGGTAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEIFPYSNLTLQNHTCTPVWATE*RFMVVV Trigger: AACTACTACCATGAATCTGCATTCTGTTGCCCACAC...TGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCAGGAAACCTTTTAAACTaGTGGAAATGGCCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSGNLLN*WKWPVG Trigger: ACCCACAGGCCATTTCCAGCAGTTTAAAAGGTTTCC...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATTACAGCCTCTATaGGCCAGTCTCATAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSKYTEIFPYSNLTLQNHTLQPL*ASLIAE Trigger: TTCAGCTATGAGACTGGCTCATAGAGGCTGTAATGT...ATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCACTGGTGTGAGCGTTaGAACTGGTGTATCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: YTEIFPYSNLTLQNHTCTHWCER*NWCINI Trigger: AATGTTGATACACCAGTTTCAACGCTCACACCAGTG...GGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACCCAAGTCTTCACTGGTGTaGGCGTTGAAACTGGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IHAPQTDLLLKFLFLVSPKSSLV*ALKLVY Trigger: ATACACCAGTTTCAACGCTCACACCAGTGAAGACTT...GGGTGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATTCAGGTTAAGTTCTTaGAGGTGTATGAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSFRLSS*RCMRSP Trigger: TGGAGACCTCATACACCTTCAAGAACTTAACCTGAA...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCGTCCAAACTCCGAAGTaGCTTCTGGAGTGTAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KYTEIFPYSNLTLQNHTCVQTPK*LLECRM Trigger: CATTCTACACTCCAGAAGTCACTTCGGAGTTTGGAC...GCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGAAGATGTTAGAGATGGAATGGAATaGTATGAGAGCCATATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAYAYQLGQAHSKKSEDVRDGME*YESHME Trigger: TTCCATATGGCTCTCATATCATTCCATTCCATCTCT...AACATCTTCAGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | GAGATAATAGGTGCTTCAGTACCACCCAAATTATCTACTAAGACCACAGTGTGGAGAGATGGAATGGAATaGTATGAGAGCCATATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EIIGASVPPKLSTKTTVWRDGME*YESHME Trigger: TTCCATATGGCTCTCATATCATTCCATTCCATCTCT...CCACACTGTGGTCTTAGTAGATAATTTGGGTGGTACTGAAGCACCTATTATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSKYTEIFPYSNLTLQTCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...TTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACTCCCTTACTCCAATTTaGCGCTGCAAAATCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDSLTPI*RCKIIH Trigger: ATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGA...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGAAGATGTTTCCCTTACTCCAATTTaGCGCTGCAAAATCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: KAYAYQLGQAHSKKSEDVSLTPI*RCKIIH Trigger: ATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGA...AACATCTTCAGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTACTAAGACCACAGTGTGGGCAACAGAATGCAGATTCATGGTAGTAACCTGGGTGACAGAATaGGACTCCATCTTACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLSTKTTVWATECRFMVVTWVTE*DSILLR Trigger: TCTAAGTAAGATGGAGTCTCATTCTGTCACCCAGGT...TACTACCATGAATCTGCATTCTGTTGCCCACACTGTGGTCTTAGTAGATAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TTATGTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCACATTACAGCCTCTATaGGCCAGTCTCATAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCNMVRAEDSNKVNGACSTLQPL*ASLIAE Trigger: TTCAGCTATGAGACTGGCTCATAGAGGCTGTAATGT...GCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTACATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATGGAATCCTTTGGTACGGGATCTAGGATGGCCCTATTTGCAATTTTTAAATTTCACTGGTGTGAGCGTTaGAACTGGTGTATCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: MESFGTGSRMALFAIFKFHWCER*NWCINI Trigger: AATGTTGATACACCAGTTTCAACGCTCACACCAGTG...AAATTTAAAAATTGCAAATAGGGCCATCCTAGATCCCGTACCAAAGGATTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCACTTATTTCGAGCTGCTaGCAAAAAGCGAAGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSLISSC*QKAKVY Trigger: ATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAG...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCCAAAATGGTAGTAGTTCCTTaGATGAAAGAGTTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RNLPLLQFDAAKSYMHPKMVVVP*MKEFRQ Trigger: CTGTCTGAACTCTTTCATTCAAGGAACTACTACCAT...TTTGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPPLQQVYRNLPLLQFDATCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...AGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | GTGATTGTCATTCAGGTTAAGTTCTTGAAGGTGTATGAGGTCTCCAATTGTAGCTGGAATGGAATGATATaGGAGCCATATGGAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIVIQVKFLKVYEVSNCSWNGMI*EPYGIL Trigger: AAGGATTCCATATGGCTCTCATATCATTCCATTCCA...GCTACAATTGGAGACCTCATACACCTTCAAGAACTTAACCTGAATGACAATCAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTACTAAGACCACAGTGTGGGCAACAGAATGCAGATTCATGGTAGTAGTGTGGGCAACAGAATaGAGATTCATGGTAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLSTKTTVWATECRFMVVVWATE*RFMVVV Trigger: AACTACTACCATGAATCTGCATTCTGTTGCCCACAC...TACTACCATGAATCTGCATTCTGTTGCCCACACTGTGGTCTTAGTAGATAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACTTGCAGCTTTATTACTaGAAGGACTTTTGGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDLQLYY*KDFWLF Trigger: GAACAACCAAAAGTCCTTCCAGTAATAAAGCTGCAA...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | ACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCCAGATATGAGAGCCATATaGAATCCTTACTTAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEIFPYSNLTLQNHTCTPDMRAI*NPYLDR Trigger: TCTGTCTAAGTAAGGATTCCATATGGCTCTCATATC...TGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318317.8 |
||
| CDS-3UTR CCA 90 bp | GTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCTTTAAACCTTTTAAACTGCTaGAAATGGCCTGTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VIWFVQKIPIKLMVLAALNLLNC*KWPVGC Trigger: GCAACCCACAGGCCATTTCCAGCAGTTTAAAAGGTT...TAAAGCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCACTAAATGACTCCAAGTaGTTGTCATTCAGGTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSLNDSK*LSFRLS Trigger: ACTTAACCTGAATGACAATCACTTGGAGTCATTTAG...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCAACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSTCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACTCCCTTACTCCAATTTaGCGCTGCAAAATCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: QQVYRNLPLLQFDAAKSYSLTPI*RCKIIH Trigger: ATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGA...GTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCAAATTTGGTGAAGAATTaGTCAATGTTCTCCCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSNLVKN*SMFSLS Trigger: GCTAAGGGAGAACATTGAGCAATTCTTCACCAAATT...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | AAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCGTGTGGGCAACAGAATaGAGATTCATGGTAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KYTEIFPYSNLTLQNHTCVWATE*RFMVVV Trigger: AACTACTACCATGAATCTGCATTCTGTTGCCCACAC...GCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTAACCTTTTAAACTGCTaGAAATGGCCTTACTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSKAYAYQLGQAHSKKSNLLNC*KWPYLD Trigger: GTCTAAGTAAGGCCATTTCCAGCAGTTTAAAAGGTT...AGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACAAATTCTTAAGTTCCTaGAGCTGGCAAAACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QQVYRNLPLLQFDAAKSYKFLSS*SWQNCT Trigger: TGTGCAGTTTTGCCAGCTCCAGGAACTTAAGAATTT...GTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | TTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCCTATCTTGCAAGGAATTGCAGCTTTATTACTaGAAGGACTTTTGGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FELLTKSEGLLVVLSCKELQLYY*KDFWLF Trigger: GAACAACCAAAAGTCCTTCCAGTAATAAAGCTGCAA...TTCCTTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCCTATTATGTAATATaGTTCGTGCAGAAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLQQVYRNLPLLQFDAAKSYYVI*FVQKIP Trigger: TGGAATCTTCTGCACGAACCATATTACATAATAGGA...TTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298288.11 ENST00000540712.1 |
||
| CDS-3UTR CCA 90 bp | CGCTGCAAAATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTGCGGTATCCAAATCTTaGCAGAGATGGAATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RCKIIHAPQTDLLLKFLFAVSKS*QRWNGM Trigger: CATTCCATTCCATCTCTGCCAAGATTTGGATACCGC...AAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGATTTTGCAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCATTCAGGTTAAGTTCTTaGAGGTGTATGAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSFRLSS*RCMRSP Trigger: TGGAGACCTCATACACCTTCAAGAACTTAACCTGAA...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | TGGAATCCTTTGGTACGGGATCTAGGATGGCCCTATTTGCAATTTTTAAATTTTCTTATTTCGAGCTGCTaGCAAAAAGCGAAGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WNPLVRDLGWPYLQFLNFLISSC*QKAKVY Trigger: ATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAG...AAAATTTAAAAATTGCAAATAGGGCCATCCTAGATCCCGTACCAAAGGATTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCTGGAATGGAATGATATaGGAGCCATATGGAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KYTEIFPYSNLTLQNHTCWNGMI*EPYGIL Trigger: TAGGATTCCATATGGCTCTCATATCATTCCATTCCA...GCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298288.11 ENST00000540712.1 |
||
| CDS-3UTR TCA 90 bp | AGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGGAATGGAATGATATaGGAGCCATATGGAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SKYTEIFPYSNLTLQNHTWNGMI*EPYGIL Trigger: TAGGATTCCATATGGCTCTCATATCATTCCATTCCA...TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298288.11 ENST00000540712.1 |
||
| CDS-3UTR TCA 90 bp | AAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCAGAGATGGAATGGAATaGTATGAGAGCCATATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KYTEIFPYSNLTLQNHTCRDGME*YESHME Trigger: TTCCATATGGCTCTCATATCATTCCATTCCATCTCT...GCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | GTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCTTTAATGGTAGTAGTTCCTTaGATGAAAGAGTTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VIWFVQKIPIKLMVLAALMVVVP*MKEFRQ Trigger: CTGTCTGAACTCTTTCATTCAAGGAACTACTACCAT...TAAAGCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | AAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCTGGAATGGAATGATATaGGAGCCATATGGAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KYTEIFPYSNLTLQNHTCWNGMI*EPYGIL Trigger: AAGGATTCCATATGGCTCTCATATCATTCCATTCCA...GCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | ATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACCCGGAAACCTTTTAAACTaGTGGAAATGGCCTTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: IHAPQTDLLLKFLFLVSPGNLLN*WKWPYL Trigger: TAAGTAAGGCCATTTCCAGCAGTTTAAAAGGTTTCC...GGGTGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000298288.11 ENST00000540712.1 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCAATAAGAGATAATAGGTaGTTCAGTACCACCCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSIRDNR*FSTTQI Trigger: AATTTGGGTGGTACTGAAGCACCTATTATCTCTTAT...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | ATTGTCATTCAGGTTAAGTTCTTGAAGGTGTATGAGGTCTCCAATTGTAGCTGGATAAGAGATAATAGGTaGTTCAGTACCACCCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: IVIQVKFLKVYEVSNCSWIRDNR*FSTTQI Trigger: AATTTGGGTGGTACTGAAGCACCTATTATCTCTTAT...CCAGCTACAATTGGAGACCTCATACACCTTCAAGAACTTAACCTGAATGACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | TTATGTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCGAATCTTGTCTCCTTTaGTATTCTATCCTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCNMVRAEDSNKVNGACSESCLL*YSILSA Trigger: AGCACTCAGGATAGAATAGCAAAGGAGACAAGATTC...GCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTACATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR CCA 90 bp | AGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCCAAATTAAACTGCTGGAAATaGCCTTACTTAGACAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: RNLPLLQFDAAKSYMHPKLNCWK*PYLDRY Trigger: ATATCTGTCTAAGTAAGGCCATTTCCAGCAGTTTAA...TTTGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298288.11 ENST00000540712.1 |
||
| CDS-3UTR CCA 90 bp | TTATGTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCGTACGGGATCTAGGATaGCCCTATTTGCAATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCNMVRAEDSNKVNGACSVRDLG*PYLQFL Trigger: TAAAAATTGCAAATAGGGCCATCCTAGATCCCGTAC...GCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTACATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CGCTGCAAAATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTTATTTCGAGCTGCTaGCAAAAAGCGAAGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RCKIIHAPQTDLLLKFLFLISSC*QKAKVY Trigger: ATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAG...AAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGATTTTGCAGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCAATGGTAGTAGTTCCTTaGATGAAAGAGTTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSMVVVP*MKEFRQ Trigger: CTGTCTGAACTCTTTCATTCAAGGAACTACTACCAT...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR TCA 90 bp | CAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGACATGCACCCCAAACTaGTCTGTTATTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLPLLQFDAAKSYMTCTPN*SVIEIS Trigger: AGAAATTTCAATAACAGATCAGTTTGGGGTGCATGT...CATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATATAAGAGATAATAGGTaGTTCAGTACCACCCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSKYTEIFPYSNLTLQNHIRDNR*FSTTQI Trigger: AATTTGGGTGGTACTGAAGCACCTATTATCTCTTAT...ATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGACAGAATCTTCCACAAACACAAATTTTTGCGGTATCCAAATCTTGGCTTAAACTGCTGGAAATaGCCTTACTTAGACAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SSDRIFHKHKFLRYPNLGLNCWK*PYLDRY Trigger: ATATCTGTCTAAGTAAGGCCATTTCCAGCAGTTTAA...GCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR CCA 90 bp | CAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGAACCTTTTAAACTGCTaGAAATGGCCTTACTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLPLLQFDAAKSYMNLLNC*KWPYLD Trigger: GTCTAAGTAAGGCCATTTCCAGCAGTTTAAAAGGTT...CATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298288.11 ENST00000540712.1 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGACAGAATCTTCCACAAACACAAATTTTTGCGGTATCCAAATCTTGGCTACTGGAAGGACTTTTaGTTGTTCAAAAGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSDRIFHKHKFLRYPNLGYWKDF*LFKSIS Trigger: GGAAATACTTTTGAACAACCAAAAGTCCTTCCAGTA...GCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | TTATGTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCTTGCAGCTTTATTACTaGAAGGACTTTTGGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCNMVRAEDSNKVNGACSLQLYY*KDFWLF Trigger: GAACAACCAAAAGTCCTTCCAGTAATAAAGCTGCAA...GCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTACATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | ATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACCCTCCTATTATGTAATATaGTTCGTGCAGAAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHAPQTDLLLKFLFLVSPSYYVI*FVQKIP Trigger: TGGAATCTTCTGCACGAACCATATTACATAATAGGA...GGGTGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298288.11 ENST00000540712.1 |
||
| CDS-3UTR TCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACTAAATGACTCCAAGTaGTTGTCATTCAGGTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSLNDSK*LSFRLS Trigger: ACTTAACCTGAATGACAATCACTTGGAGTCATTTAG...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR GCA 90 bp | CAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGATAAGAGATAATAGGTaGTTCAGTACCACCCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLPLLQFDAAKSYMIRDNR*FSTTQI Trigger: AATTTGGGTGGTACTGAAGCACCTATTATCTCTTAT...CATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | TTATGTAATATGGTTCGTGCAGAAGATTCCAATAAAGTTAATGGTGCTTGCAGCTACTGGAAGGACTTTTaGTTGTTCAAAAGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCNMVRAEDSNKVNGACSYWKDF*LFKSIS Trigger: GGAAATACTTTTGAACAACCAAAAGTCCTTCCAGTA...GCTGCAAGCACCATTAACTTTATTGGAATCTTCTGCACGAACCATATTACATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CCA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCATACTGGAAGGACTTTTaGTTGTTCAAAAGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSYWKDF*LFKSIS Trigger: GGAAATACTTTTGAACAACCAAAAGTCCTTCCAGTA...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS GCA 90 bp | TTCCCGCCACCCGGCGCCGCCATCGGGGTCCTCGCGCACGCGGGCTaGCCACTGATCTGCCTGCCTGTTGGACTGGTCCGCGACTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPPPGAAIGVLAHAG*PLICLPVGLVRDSG Trigger: GCCCGAGTCGCGGACCAGTCCAACAGGCAGGCAGATCAGTGGGCAGCCCGCGTGCGCGAGGACCCCGATGGCGGCGCCGGGTGGCGGGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS CCA 90 bp | GGGAAACGGCTTCCCTTCTCCCTTAGCAGGGCCGGGTTCTCGCCGTaGTTGCGTACCGGGACTGACCACCTGGATCCGGGCTCGCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GKRLPFSLSRAGFSP*LRTGTDHLDPGSRP Trigger: CGGGCGCGAGCCCGGATCCAGGTGGTCAGTCCCGGTACGCAACCACGGCGAGAACCCGGCCCTGCTAAGGGAGAAGGGAAGCCGTTTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318317.8 |
||
| CDS GCA 90 bp | GCTCGGACGCCCTTGCCCCGGTTCCTAAGCCCCAAGGCGGGCAAGTaGCGGCTGATCACCTCCACCTCACAGTGTAGCTTCATCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARTPLPRFLSPKAGK*RLITSTSQCSFISP Trigger: GGGCGAGATGAAGCTACACTGTGAGGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGGGCTTAGGAACCGGGGCAAGGGCGTCCGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS TCA 90 bp | GTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTaGAACTTCCTCCTTCCCGCCACCCGGCGCCGCCATCGGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VASSRPTATTTSSWL*NFLLPATRRRHRGP Trigger: AGGACCCCGATGGCGGCGCCGGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTTGTGGCCGTTGGGCGAGATGAAGCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | TCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACGGCTCGGACGCCCTaGCCCCGGTTCCTAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKYTEIFPYSNLTLQNHTARTP*PRFLSP Trigger: GGGGCTTAGGAACCGGGGCAAGGGCGTCCGAGCCGT...ATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAAGGGTTCTCGCCGTGGTaGCGTACCGGGACTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLQQVYRNLPLLQFDAAKGFSPW*RTGTDH Trigger: GTGGTCAGTCCCGGTACGCAACCACGGCGAGAACCC...TTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCAGGGTTCTCGCCGTGGTaGCGTACCGGGACTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQQVYRNLPLLQFDAAKSGFSPW*RTGTDH Trigger: GTGGTCAGTCCCGGTACGCAACCACGGCGAGAACCC...TGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
||
| CDS TCA 90 bp | AGCCTGGGGTGGGCACACCTCCCAGTAGGTTATATACAAACTCCATaGGAGCAGGAATCTTGTCTCCTTTGCTATTCTATCCTGAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGWAHLPVGYIQTP*EQESCLLCYSILSA Trigger: AGCACTCAGGATAGAATAGCAAAGGAGACAAGATTCCTGCTCTCATGGAGTTTGTATATAACCTACTGGGAGGTGTGCCCACCCCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCACGTCAAGCTGGCTTaGAAACTTCCTCCTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLSSKYTEIFPYSNLTLHVKLA*KLPPSR Trigger: GCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTG...CAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | AGATATCCACAGGAGGCTCCTTTAACCGAACAGTGGCTTTCCCCTCATCTACAAGCCTTGATTTTGTTCTaGCTGAGGTCCAAACTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RYPQEAPLTEQWLSPHLQALILF*LRSKLR Trigger: TCGGAGTTTGGACCTCAGCAAGAACAAAATCAAGGC...TTGTAGATGAGGGGAAAGCCACTGTTCGGTTAAAGGAGCCTCCTGTGGATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR CAA 90 bp | AGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCCAAACACGTCAAGCTGGCTTaGAAACTTCCTCCTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RNLPLLQFDAAKSYMHPKHVKLA*KLPPSR Trigger: GCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTG...TTTGGGGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | AGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGAAGATTGCACAGGGAGTGCCTaGATTTTGTTCTTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKAYAYQLGQAHSKKSEDCTGSA*ILFLLR Trigger: CCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCA...ATCTTCAGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | CTGGCAAAACTGCACAGGGAGTGCCTTGATTTTGTTCTTGCTGAGGTCCAAACTTGCGGTATCCAAATCTaGGCAGAGATGGAATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LAKLHRECLDFVLAEVQTCGIQI*AEMEWN Trigger: ATTCCATTCCATCTCTGCCAAGATTTGGATACCGCA...AGTTTGGACCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCAGTTTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | CATACGCATATCAACTCGGACAAGCCCACAGTAAGAAGTCTGAAGATGTTCCAAGCCATATGGAATCCTTaGGTACGGGATCTAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: HTHINSDKPTVRSLKMFQAIWNP*VRDLGW Trigger: CCATCCTAGATCCCGTACCAAAGGATTCCATATGGC...TTGGAACATCTTCAGACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | TATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCCACGTCAAGCTGGCTTaGAAACTTCCTCCTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: YTEIFPYSNLTLQNHTCTHVKLA*KLPPSR Trigger: GCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTG...GGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | CTTCAGTCCATTAGCCTGGGGTGGGCACACCTCCCAGTAGGTTATATACAAACTCCCTCATCTACAAATTaGGTGAAGAATTGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LQSISLGWAHLPVGYIQTPSSTN*VKNCSM Trigger: CATTGAGCAATTCTTCACCAAATTTGTAGATGAGGG...AGTTTGTATATAACCTACTGGGAGGTGTGCCCACCCCAGGCTAATGGACTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540712.1 |
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| CDS-3UTR CAA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACTGCACAGGGAGTGCCTaGATTTTGTTCTTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDCTGSA*ILFLLR Trigger: CCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCA...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | TGGAATCCTTTGGTACGGGATCTAGGATGGCCCTATTTGCAATTTTTAAATTTTCACGTCAAGCTGGCTTaGAAACTTCCTCCTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WNPLVRDLGWPYLQFLNFHVKLA*KLPPSR Trigger: GCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTG...AAAATTTAAAAATTGCAAATAGGGCCATCCTAGATCCCGTACCAAAGGATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | CCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAATTCAGGTTAAGTTCTaGAAGGTGTATGAGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPLQQVYRNLPLLQFDAAIQVKF*KVYEVS Trigger: GGAGACCTCATACACCTTCAAGAACTTAACCTGAAT...TGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACTGCGGTATCCAAATCTaGGCAGAGATGGAATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDCGIQI*AEMEWN Trigger: ATTCCATTCCATCTCTGCCAAGATTTGGATACCGCA...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | ATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACCCGCCTTGATTTTGTTCTaGCTGAGGTCCAAACTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: IHAPQTDLLLKFLFLVSPALILF*LRSKLR Trigger: TCGGAGTTTGGACCTCAGCAAGAACAAAATCAAGGC...GGGTGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | AGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACAGGGAGTGCCTaGATTTTGTTCTTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKYTEIFPYSNLTLQNHTCTGSA*ILFLLR Trigger: CCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCA...TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | CTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAATTCCCTTACTCCAATTaGACGCTGCAAAATCATACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSSKYTEIFPYSNLTLQFPYSN*TLQNHT Trigger: TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAA...TTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAGGCTTTTTAAGCAAAGCATACGCATATCAACTCGGACAAGCCCACAGATGAGAGCAGGAATCTaGTCTCCTTTGCTATTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FLRLFKQSIRISTRTSPQMRAGI*SPLLFY Trigger: ATAGAATAGCAAAGGAGACAAGATTCCTGCTCTCAT...CTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAAGCCTTAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540712.1 |
||
| CDS-3UTR CAA 90 bp | CACATTCCTCCTCTCCAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACCCCTCATCTACAAATTaGGTGAAGAATTGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: HIPPLQQVYRNLPLLQFDPSSTN*VKNCSM Trigger: CATTGAGCAATTCTTCACCAAATTTGTAGATGAGGG...GTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTGGAGAGGAGGAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | GAGATGGAATGGAATGATATGAGAGCCATATGGAATCCTTTGGTACGGGATCTACCCTCATCTACAAATTaGGTGAAGAATTGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EMEWNDMRAIWNPLVRDLPSSTN*VKNCSM Trigger: CATTGAGCAATTCTTCACCAAATTTGTAGATGAGGG...TAGATCCCGTACCAAAGGATTCCATATGGCTCTCATATCATTCCATTCCATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | TGGAATCCTTTGGTACGGGATCTAGGATGGCCCTATTTGCAATTTTTAAATTTTGCCTTGATTTTGTTCTaGCTGAGGTCCAAACTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WNPLVRDLGWPYLQFLNFALILF*LRSKLR Trigger: TCGGAGTTTGGACCTCAGCAAGAACAAAATCAAGGC...AAAATTTAAAAATTGCAAATAGGGCCATCCTAGATCCCGTACCAAAGGATTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | TATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCACCTGCGGTATCCAAATCTaGGCAGAGATGGAATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YTEIFPYSNLTLQNHTCTCGIQI*AEMEWN Trigger: ATTCCATTCCATCTCTGCCAAGATTTGGATACCGCA...GGTGCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATTCAGGTTAAGTTCTaGAAGGTGTATGAGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQVYRNLPLLQFDAAKSYIQVKF*KVYEVS Trigger: GGAGACCTCATACACCTTCAAGAACTTAACCTGAAT...GTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | TTATTTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCCTATCTTGCAATGCGGTATCCAAATCTaGGCAGAGATGGAATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LFRAADKKRRFISCPILQCGIQI*AEMEWN Trigger: ATTCCATTCCATCTCTGCCAAGATTTGGATACCGCA...TTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | TTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCCTATCTTGCAAGGAATTCCCTTACTCCAATTaGACGCTGCAAAATCATACA | + |
|
Preference number: 5 (lower is better) Translates to: FELLTKSEGLLVVLSCKEFPYSN*TLQNHT Trigger: TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAA...TTCCTTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
||
| CDS TCA 90 bp | CACAAATTTTTGCGGTATCCAAATCTTGGCAGAGATGGAATGGAATaGTATGAGAGCCATATGGAATCCTTACTTAGACAGATATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: HKFLRYPNLGRDGME*YESHMESLLRQIST Trigger: TGTGGATATCTGTCTAAGTAAGGATTCCATATGGCTCTCATATCATTCCATTCCATCTCTGCCAAGATTTGGATACCGCAAAAATTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318317.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGATTCAGGTTAAGTTCTaGAAGGTGTATGAGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVYRNLPLLQFDAAKSYMIQVKF*KVYEVS Trigger: GGAGACCTCATACACCTTCAAGAACTTAACCTGAAT...CATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000540712.1 ENST00000554869.5 |
||
| CDS-3UTR CAA 90 bp | ATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCACCCCACAAACACAAATTTTaGCGGTATCCAAATCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: IHAPQTDLLLKFLFLVSPHKHKF*RYPNLG Trigger: GCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTG...GGGTGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | AAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATGCCACAAACACAAATTTTaGCGGTATCCAAATCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: KYTEIFPYSNLTLQNHTCHKHKF*RYPNLG Trigger: GCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTG...GCATGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | AGCAAGTATACAGAAATCTTCCCTTACTCCAATTTGACGCTGCAAAATCATACATTCCCTTACTCCAATTaGACGCTGCAAAATCATACA | + |
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Preference number: 5 (lower is better) Translates to: SKYTEIFPYSNLTLQNHTFPYSN*TLQNHT Trigger: TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAA...TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAAGATTTCTGTATACTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | CGCTGCAAAATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCCCTCATCTACAAATTaGGTGAAGAATTGCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: RCKIIHAPQTDLLLKFLFPSSTN*VKNCSM Trigger: CATTGAGCAATTCTTCACCAAATTTGTAGATGAGGG...AAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGATTTTGCAGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | AAAAATGGAAGCTTATTTCGAGCTGCTGACAAAAAGCGAAGGTTTATTAGTTGTCACAAACACAAATTTTaGCGGTATCCAAATCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: KNGSLFRAADKKRRFISCHKHKF*RYPNLG Trigger: GCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTG...ACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAGCTTCCATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000540712.1 ENST00000554869.5 |
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| CDS-3UTR CAA 90 bp | ATCATACATGCACCCCAAACTGATCTGTTATTGAAATTTCTTTTTCTGGTCTCATTCCCTTACTCCAATTaGACGCTGCAAAATCATACA | + |
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Preference number: 5 (lower is better) Translates to: IIHAPQTDLLLKFLFLVSFPYSN*TLQNHT Trigger: TGTATGATTTTGCAGCGTCAAATTGGAGTAAGGGAA...TGAGACCAGAAAAAGAAATTTCAATAACAGATCAGTTTGGGGTGCATGTATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS GCA 72 bp | CCCGGCGCCGCCATCGGGGTCCTCGCGCACGCGGGCTaGCCACTGATCTGCCTGCCTGTTGGACTGGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PGAAIGVLAHAG*PLICLPVGLVR Trigger: GCGGACCAGTCCAACAGGCAGGCAGATCAGTGGGCAGCCCGCGTGCGCGAGGACCCCGATGGCGGCGCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318317.8 ENST00000554869.5 |
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| CDS GCA 72 bp | CCTTCTCCCTTAGCAGGGCCGGGTTCTCGCCGTGGTTaGGTACCGGGACTGACCACCTGGATCCGGGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: PSPLAGPGSRRG*VPGLTTWIRAR Trigger: GCGAGCCCGGATCCAGGTGGTCAGTCCCGGTACGCAACCACGGCGAGAACCCGGCCCTGCTAAGGGAGAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318317.8 |
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| CDS TCA 72 bp | TCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTaGAACTTCCTCCTTCCCGCCACCCGGCGCCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SRPTATTTSSWL*NFLLPATRRRH Trigger: ATGGCGGCGCCGGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTTGTGGCCGTTGGGCGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000554869.5 |
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| CDS GCA 72 bp | CCCTTGCCCCGGTTCCTAAGCCCCAAGGCGGGCAAGTaGCGGCTGATCACCTCCACCTCACAGTGTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLPRFLSPKAGK*RLITSTSQCSF Trigger: GAAGCTACACTGTGAGGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGGGCTTAGGAACCGGGGCAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000540712.1 ENST00000554869.5 |
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| CDS CAA 72 bp | ATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTaGAAACTTCCTCCTTCCCGCCACCCGGCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: ISPNGHNHVKLA*KLPPSRHPAPP Trigger: TGGCGGCGCCGGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTTGTGGCCGTTGGGCGAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000554869.5 |
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| CDS CAA 90 bp | TGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTaGAAACTTCCTCCTTCCCGCCACCCGGCGCCGCCATCGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CSFISPNGHNHVKLA*KLPPSRHPAPPSGS Trigger: GGACCCCGATGGCGGCGCCGGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTTGTGGCCGTTGGGCGAGATGAAGCTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298288.11 ENST00000318317.8 ENST00000554869.5 |
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| CDS TCA 72 bp | GAGAGCAGGAATCTTGTCTCCTTTGCTATTCTATCCTaGGTGCTCATAGCGGGTCCCGCGCTTGTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ESRNLVSFAILS*VLIAGPALVLQ Trigger: CTGAAGGACAAGCGCGGGACCCGCTATGAGCACTCAGGATAGAATAGCAAAGGAGACAAGATTCCTGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540712.1 |
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| CDS GCA 72 bp | GGAAACCTTTTAAACTGCTGGAAATGGCCTGTGGGTTaGAGTGAACCAAGCTCTTCCCACTGCACTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: GNLLNCWKWPVG*SEPSSSHCTPT Trigger: GGTTGGAGTGCAGTGGGAAGAGCTTGGTTCACTGCAACCCACAGGCCATTTCCAGCAGTTTAAAAGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554869.5 |
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