RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRIG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144749

Ensembl transcript IDs: ENST00000273261.8, ENST00000383703.3, ENST00000475366.5, ENST00000491821.1, ENST00000495037.1, ENST00000495671.1, ENST00000496559.6, ENST00000497721.5, ENST00000498287.5

Found 620 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTACAGACAGGGAAGCCTGTTGCAGGGGCATCCACACATGAGCAGTaGTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCAC +
Preference number: 1 (lower is better)
Translates to: LQTGKPVAGASTHEQ*SPEAPSGACGVPPH
Trigger: GTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTCATGTGTGGATGCCCCTGCAACAGGCTTCCCTGTCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR GCA 90 bp CCAGGTCAAGGGCTGTCCTTTCCAGTCCCAGCTCAGTTTCATCTGTaGGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGA +
Preference number: 1 (lower is better)
Translates to: PGQGLSFPVPAQFHL*EGMAWTGLLWVLSR
Trigger: TCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTGGAAAGGACAGCCCTTGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR CCA 90 bp TCCTTTCCAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATaGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGGTAGCCCTG +
Preference number: 1 (lower is better)
Translates to: SFPVPAQFHLCEGMA*TGLLWVLSRNKVAL
Trigger: CAGGGCTACCTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTGGAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 90 bp TGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATaGGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTCTCCTACCTC +
Preference number: 1 (lower is better)
Translates to: CERLILHMGVTTMYR*VTLEPKLPRSLSYL
Trigger: GAGGTAGGAGAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 90 bp GATACTCCACATGGGAGTTACAACTATGTACAGATGAGTGACGCTTaGACCCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTA +
Preference number: 1 (lower is better)
Translates to: DTPHGSYNYVQMSDA*TQASSQPLLPLFPV
Trigger: TACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACTCCCATGTGGAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR CCA 90 bp GCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTaGGTCCTTAGTAGAAATAAGGTAGCCCTGAAAAGTCAGAACTTC +
Preference number: 1 (lower is better)
Translates to: AQFHLCEGMAWTGLL*VLSRNKVALKSQNF
Trigger: GAAGTTCTGACTTTTCAGGGCTACCTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 90 bp CACAAATCCCCTCTTGCGTTTACTGTGCTTCAGATCCAAGTCCTGTaGGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATG +
Preference number: 1 (lower is better)
Translates to: HKSPLAFTVLQIQVL*ATDTPHGSYNYVQM
Trigger: CATCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGATCTGAAGCACAGTAAACGCAAGAGGGGATTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 90 bp GAGGAGGAGGAAAGGCAGTGTTTAACTGTTCTGACCTTTTGCTTGTaGTGGATTAACAACCCTCATTCTACGCCTTACAGACGGACAGAT +
Preference number: 1 (lower is better)
Translates to: EEEERQCLTVLTFCL*WINNPHSTPYRRTD
Trigger: ATCTGTCCGTCTGTAAGGCGTAGAATGAGGGTTGTTAATCCATCACAAGCAAAAGGTCAGAACAGTTAAACACTGCCTTTCCTCCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCCTATGTACAGATGAGTaGCGCTTGAACCCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSLCTDE*RLNPSF
Trigger: GAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAG...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTCAGATGAGTGACGCTTaGACCCAAGCTTCCTCGCAG +
Preference number: 2 (lower is better)
Translates to: LQVWMALAPLALQTGKPVQMSDA*TQASSQ
Trigger: CTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTG...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCCAGATCCAAGTCCTGTaGGCGACTGATACTCCACAT +
Preference number: 2 (lower is better)
Translates to: ASVDGTCTPGSTDREACCQIQVL*ATDTPH
Trigger: ATGTGGAGTATCAGTCGCTCACAGGACTTGGATCTG...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTAGTCCTGTGAGCGACTaGTACTCCACATGGGAGTTA +
Preference number: 2 (lower is better)
Translates to: TASVDGTCTPGSTDREACSPVSD*YSTWEL
Trigger: TAACTCCCATGTGGAGTATCAGTCGCTCACAGGACT...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAACACAAATCCCCTCTTaGGTTTACTGTGCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: APSGACGVPPHSSLGVYETQIPS*VYCASD
Trigger: ATCTGAAGCACAGTAAACGCAAGAGGGGATTTGTGT...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR GCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCCTCTTGCGTTTACTGTaGTTCAGATCCAAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: ASVDGTCTPGSTDREACCLLRLL*FRSKSC
Trigger: ACAGGACTTGGATCTGAAGCACAGTAAACGCAAGAG...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCCAGATCCAAGTCCTGTaGGCGACTGATACTCCACAT +
Preference number: 2 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSQIQVL*ATDTPH
Trigger: ATGTGGAGTATCAGTCGCTCACAGGACTTGGATCTG...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGGGAAAAGCCATTCACTaGAAGTGTGGATGGCACTTG +
Preference number: 2 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKGKAIH*KCGWHL
Trigger: CAAGTGCCATCCACACTTGCAGTGAATGGCTTTTCC...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR GCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTTATAAATTCCAGCCATaGGTTAAGGCACCAGAACTA +
Preference number: 2 (lower is better)
Translates to: QSQLSFICAKEWHGQACSYKFQP*VKAPEL
Trigger: TAGTTCTGGTGCCTTAACGCATGGCTGGAATTTATA...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR CCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCCTTCCGGCGCATGTaGAGTCCCACCGCACAGCAG +
Preference number: 2 (lower is better)
Translates to: LYIKVILPLSHCLSEAANSFRRM*SPTAQQ
Trigger: CTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGA...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR GCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAACACAAATCCCCTCTTaGGTTTACTGTGCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: ICAKEWHGQACSGSLVEITQIPS*VYCASD
Trigger: ATCTGAAGCACAGTAAACGCAAGAGGGGATTTGTGT...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR CCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCACTGCAAGTGTGGATaGCACTTGCACCCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LYIKVILPLSHCLSEAANHCKCG*HLHPWL
Trigger: GAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGTG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCAGATGAGTGACGCTTaGACCCAAGCTTCCTCGCAG +
Preference number: 2 (lower is better)
Translates to: LYIKVILPLSHCLSEAANQMSDA*TQASSQ
Trigger: CTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR CCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCATTCACTGCAAGTGTaGATGGCACTTGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: LYIKVILPLSHCLSEAANHSLQV*MALAPL
Trigger: CAGGGGTGCAAGTGCCATCCACACTTGCAGTGAATG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGCATTCACTGCAAGTGTaGATGGCACTTGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILHSLQV*MALAPL
Trigger: CAGGGGTGCAAGTGCCATCCACACTTGCAGTGAATG...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTACACCAAAAACTCCTGTaGACAAATGTGGTTGTAGCC +
Preference number: 2 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLHQKLL*TNVVVA
Trigger: GGCTACAACCACATTTGTTCACAGGAGTTTTTGGTG...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR TCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGACAACTATGTACAGATaGGTGACGCTTGAACCCAAG +
Preference number: 2 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILTTMYR*VTLEPK
Trigger: CTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGT...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR GCA 72 bp GGGCTGTCCTTTCCAGTCCCAGCTCAGTTTCATCTGTaGGAAGGAATGGCATGGACAGGCCTGCTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: GLSFPVPAQFHL*EGMAWTGLLWV
Trigger: GACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTGGAAAGGACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR CCA 72 bp TTCCAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATaGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAA +
Preference number: 3 (lower is better)
Translates to: FQSQLSFICAKE*HGQACSGSLVE
Trigger: TTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR CAA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAAGTGTGGATGGCACTaGCACCCCTGGCTCTACAGA +
Preference number: 3 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIKCGWH*HPWLYR
Trigger: TCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTT...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 72 bp CATGGGAGTTACAACTATGTACAGATGAGTGACGCTTaGACCCAAGCTTCCTCGCAGCCTCTCCTACCTCTC +
Preference number: 3 (lower is better)
Translates to: HGSYNYVQMSDA*TQASSQPLLPL
Trigger: GAGAGGTAGGAGAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACTCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 72 bp TACTCCACATGGGAGTTACAACTATGTACAGATGAGTaGCGCTTGAACCCAAGCTTCCTCGCAGCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: YSTWELQLCTDE*RLNPSFLAASP
Trigger: AGGAGAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACTCCCATGTGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 72 bp CTGATACTCCACATGGGAGTTACAACTATGTACAGATaGGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: LILHMGVTTMYR*VTLEPKLPRSL
Trigger: GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACTCCCATGTGGAGTATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 72 bp CCTCTTGCGTTTACTGTGCTTCAGATCCAAGTCCTGTaGGCGACTGATACTCCACATGGGAGTTACAACTAT +
Preference number: 3 (lower is better)
Translates to: PLAFTVLQIQVL*ATDTPHGSYNY
Trigger: ATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGATCTGAAGCACAGTAAACGCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR GCA 72 bp GGCACTCATAAGATGGTTAGCTACCAGTCTCAAAAGTaGAAATTATACCCAGAACCCAGGTCAAGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: GTHKMVSYQSQK*KLYPEPRSRAV
Trigger: GACAGCCCTTGACCTGGGTTCTGGGTATAATTTGCACTTTTGAGACTGGTAGCTAACCATCTTATGAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR-3UTR CAA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATAGACAGGGAAGCCTGTaGCAGGGGCATCCACACATG +
Preference number: 3 (lower is better)
Translates to: LYIKVILPLSHCLSEAANRQGSL*QGHPHM
Trigger: CATGTGTGGATGCCCCTGCAACAGGCTTCCCTGTCT...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR TCA 72 bp GAAAGGCAGTGTTTAACTGTTCTGACCTTTTGCTTGTaGTGGATTAACAACCCTCATTCTACGCCTTACAGA +
Preference number: 3 (lower is better)
Translates to: ERQCLTVLTFCL*WINNPHSTPYR
Trigger: TCTGTAAGGCGTAGAATGAGGGTTGTTAATCCATCACAAGCAAAAGGTCAGAACAGTTAAACACTGCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACGGGCGCGGGGACTGTaGGGACCCGAACGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYERARGL*GPERPQ
Trigger: CTGCGGCCGTTCGGGTCCTCACAGTCCCCGCGCCCG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCCCGCGCCATCTTGTCTaGAGCGCGCTGCGAACTCCG +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSPRHLV*SALRTP
Trigger: CGGAGTTCGCAGCGCGCTCCAGACAAGATGGCGCGG...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGCAGCCCGAGCTCGGTaGCGGCAGGCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEAARAR*RQASSS
Trigger: AGAGGAAGATGCCTGCCGGCACCGAGCTCGGGCTGC...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGGGCAGTGCTGCCGCTaGGCCTGGAAGACAGGCGTT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEGQCCR*AWKTGV
Trigger: AACGCCTGTCTTCCAGGCGCAGCGGCAGCACTGCCC...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACCGCGCCATCTTGTCTaGAGCGCGCTGCGAACTCCG +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEPRHLV*SALRTP
Trigger: CGGAGTTCGCAGCGCGCTCCAGACAAGATGGCGCGG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCGTCCTGTCAGTGGCGTaGACTCGGGACTGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSVLSVA*TRDWRH
Trigger: GTGACGCCAGTCCCGAGTCCACGCCACTGACAGGAC...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCTGATGCAGGGCCGTaGGGCCGTAGAGCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVADAGP*GRRASR
Trigger: GCGGCTCGCTCTACGGCCTCACGGCCCTGCATCAGC...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCTGCCCGAAAGTGACCTaGCGGAGGTGCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSCPKVT*RRCRMV
Trigger: CACCATCCTGCACCTCCGTCAGGTCACTTTCGGGCA...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCTTGTCTGGAGCGCGCTaGGAACTCCGGGCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCLSGAR*ELRARG
Trigger: TCCCCGCGCCCGGAGTTCGCAGCGCGCTCCAGACAA...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGGCCTGCAGCATCCTaGCAATTAGCCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSRPAAS*QLATGA
Trigger: TGCCCCCGTGGCTAATTGGCAGGATGCTGCAGGCCT...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAATCCTTCCTGCAGCCTaGTGCGGGCAGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEILPAA*CGQDAQ
Trigger: CTGAGCGTCCTGCCCGCAGCAGGCTGCAGGAAGGAT...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCCTGGGTGGGCACAGGTaGCTGTCACAAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSLGGHR*LSQRPA
Trigger: TGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAG...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCATGTGCCCATTGGCCTaGGGGCCACCCTCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCMCPLA*GPPSVL
Trigger: CAGGACCGAGGGTGGCCCTCAGGCCAATGGGCACAT...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCCCGCCCGCGCTAGCTaGGAACTCCGCCGATTCGGG +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSPARAS*ELRRFG
Trigger: CCCGAATCGGCGGAGTTCGCAGCTAGCGCGGGCGGG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGTCCCCAGCGCAAGTaGAGGCGGCCGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDSPQRK*RRPRRA
Trigger: CGCCCTGCGCGGCCGCCTGCACTTGCGCTGGGGACT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATCATGGGGGAGCTGCTaGTGCTGGCTGCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYESWGSC*CWLLSM
Trigger: CATGCTCAGCAGCCAGCAGCAGCAGCTCCCCCATGA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATCGGCCCGCATCCTCTaGCACCACGTTCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYESARIL*HHVLNH
Trigger: GTGGTTCAGAACGTGGTGGCAGAGGATGCGGGCCGA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGCTGGGACGGGGAGCTaGAGCCAGCAGACTGGGATG +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCAGTGS*SQQTGM
Trigger: CATCCCAGTCTGCTGGCTGCAGCTCCCCGTCCCAGC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATCCAGGCAAAGGTCATaGGGGAGCTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYESRQRS*GSCCCW
Trigger: CCAGCAGCAGCAGCTCCCCCATGACCTTTGCCTGGA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGCGTGGACTCGGGACTaGCGTCACATGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEAWTRD*RHMLWG
Trigger: TCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGC...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGGGGACCACCAAGGATaGGGTCTGGGCAGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCGDHQG*GLGSGE
Trigger: TTCCCCGCTGCCCAGACCCCATCCTTGGTGGTCCCC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS-3UTR TCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCTCACGACAGCAATGGTaGAGATGCCTACCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSSRQQW*RCLPWS
Trigger: GGACCACGGTAGGCATCTTCACCATTGCTGTCGTGA...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACCCCGCCCGCGCTAGCTaGGAACTCCGCCGATTCGGG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDPARAS*ELRRFG
Trigger: CCCGAATCGGCGGAGTTCGCAGCTAGCGCGGGCGGG...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGAGTCCCCAGCGCAAGTaGAGGCGGCCGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKSPQRK*RRPRRA
Trigger: CGCCCTGCGCGGCCGCCTGCACTTGCGCTGGGGACT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGTGTGGATGGCACTTaGACCCCTGGCTCTACAGAC +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSSVDGT*TPGSTD
Trigger: GTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACT...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTTGCTGCCGCTGCGCCTaGAAGACAGGCGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVCCRCA*KTGVQP
Trigger: GGGCTGAACGCCTGTCTTCCAGGCGCAGCGGCAGCA...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAATTCGAGGCGGGCCATaGTGGTGGTCCGGATGGTTA +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEIRGGP*WWSGWL
Trigger: TAACCATCCGGACCACCACCATGGCCCGCCTCGAAT...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCGAAACAAGCAAGTACTaGGCTTCCGCGCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSETSKY*ASARSG
Trigger: TCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTC...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGGCTGATGCAGGGCCGTaGGGCCGTAGAGCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRADAGP*GRRASR
Trigger: GCGGCTCGCTCTACGGCCTCACGGCCCTGCATCAGC...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACGCTCAGCTGGCTGTaGGCTCGCTCCGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDTLSWL*ARSVPR
Trigger: CCTGGGCACGGAGCGAGCTCACAGCCAGCTGAGCGT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATCCTGGTCTGGTAGATaGTGCACACCCAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYESWSGR*CTPRPV
Trigger: CACTGGTCTGGGTGTGCATCATCTACCAGACCAGGA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCACCGGCCGAGGGCAGTaGTGCCGCTGCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSTGRGQ*CRCAWK
Trigger: CTTCCAGGCGCAGCGGCAGCACTGCCCTCGGCCGGT...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGACCGGCCGAGGGCAGTaGTGCCGCTGCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRTGRGQ*CRCAWK
Trigger: CTTCCAGGCGCAGCGGCAGCACTGCCCTCGGCCGGT...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACTTGTCTGGAGCGCGCTaGGAACTCCGGGCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDLSGAR*ELRARG
Trigger: TCCCCGCGCCCGGAGTTCGCAGCGCGCTCCAGACAA...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTAGGTCATGGGGGAGCTaGTGCTGCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVRSWGS*CCWLLS
Trigger: GCTCAGCAGCCAGCAGCAGCAGCTCCCCCATGACCT...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGTCCACTTCGGTGTTaGAGTCACTGCATACGACCC +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSSPLRC*SHCIRP
Trigger: GGGTCGTATGCAGTGACTGCAACACCGAAGTGGACT...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACAGCGGCAGTCCTGCTaGACTGGTGATGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEQRQSC*TGDVEN
Trigger: ATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATATAGGCGGTCCGTGTaGAAAGCAGGTGTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEYRRSV*KAGVPH
Trigger: GTGCGGAACACCTGCTTTCCACACGGACCGCCTATA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGCACCCTCCGCAATGTaGCTGATGGAATTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEAPSAM*LMELWL
Trigger: CAGCCACAATTCCATCAGCCACATTGCGGAGGGTGC...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCGGCTCCGGGCCATTTaGCGCACTTGGCTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSRLRAI*RTWLCA
Trigger: AGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGAGCTGTCCTGTCAGTaGCGTGGACTCGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVELSCQ*RGLGTG
Trigger: GCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTC...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACGGGCGCGGGGACTGTaGGGACCCGAACGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRRARGL*GPERPQ
Trigger: CTGCGGCCGTTCGGGTCCTCACAGTCCCCGCGCCCG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGGAGGCTGTCGAGCCCTaGGAAGGCGCCGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDREAVEP*EGAARV
Trigger: GACACGAGCGGCGCCTTCTCAGGGCTCGACAGCCTC...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTGCACACCCAGACCAGTaGCGTCAGGACGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACAHPDQ*RQDDAA
Trigger: AGCAGCATCGTCCTGACGTCACTGGTCTGGGTGTGC...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTCTGCAGGCAACGCTGTaGGTGTCGGGCTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACLQATL*VSGSGK
Trigger: CTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAG...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCGCCCCAAGTTCTCTCTaGGGCCGCGGCTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSAPSSL*GRGSGT
Trigger: AGTGCCGGAGCCGCGGCCGCAGAGAGAACTTGGGGC...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCCTCTGGAAAGTGGCTTaGATCTCTTGGACACACACC +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSLWKVA*ISWTHT
Trigger: GGTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAG...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGCAGCACATGCATCTTaGACAGTCCCCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCAAHAS*TVPRRP
Trigger: GGGCCTTCTGGGGACTGTCCAAGATGCATGTGCTGC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTCTGGGTGGGCACAGGTaGCTGTCACAAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACLGGHR*LSQRPA
Trigger: TGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAG...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATCCTGCGCGTGGACGTaGACAAAGTTCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYESCAWT*TKFSMS
Trigger: AGACATGGAGAACTTTGTCCACGTCCACGCGCAGGA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGCGGAGGGTTCCCCGTaGCTTTGCATTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSAEGSP*LCIGGP
Trigger: TGGCCCTCCAATGCAAAGCCACGGGGAACCCTCCGC...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATTCTATCGTGGTTACTaGGGTAGAGCGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEFYRGY*GRATLG
Trigger: GCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTTCCTTCCGGCGCATGTaGAGTCCCACCGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSSFRRM*SPTAQQ
Trigger: CTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGA...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACATTGCTGAGGTGGAGCTaGTGCAGGGCCGTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTLLRWS*CRAVRP
Trigger: CGGCCTCACGGCCCTGCATCAGCTCCACCTCAGCAA...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTGCTGCTGCTGGCTGCTaGGCATGTAAACCGGATGTC +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACAAAGC*ACKPDV
Trigger: GACATCCGGTTTACATGCTCAGCAGCCAGCAGCAGC...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACCCTCGTGCCCGAAAGTaGCCTGACGGAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDPRARK*PDGGAG
Trigger: TCCTGCACCTCCGTCAGGTCACTTTCGGGCACGAGG...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGCACACCCAGACCAGTaGCGTCAGGACGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSAHPDQ*RQDDAA
Trigger: AGCAGCATCGTCCTGACGTCACTGGTCTGGGTGTGC...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAAAGGTGTACCCAGCCTaGGCTCTTCGTCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTKVYPA*ALRPPG
Trigger: CCCGGGCGGACGAAGAGCGCAGGCTGGGTACACCTT...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGAAGGTGTACCCAGCCTaGGCTCTTCGTCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRKVYPA*ALRPPG
Trigger: CCCGGGCGGACGAAGAGCGCAGGCTGGGTACACCTT...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCTCCAGGTGCAGCACATaGATCTTGGACAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCSRCST*ILDSPQ
Trigger: CTGGGGACTGTCCAAGATGCATGTGCTGCACCTGGA...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACGCAGGACACTCAGGCTaGTCAGCTCGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDAGHSG*SARPGS
Trigger: AGAGCCTGGCCGAGCTGAGCAGCCTGAGTGTCCTGC...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATTCCAGCCCCGAGAATaGTCTCTTAGCCACAGACTT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEFQPRE*SLSHRL
Trigger: AAGTCTGTGGCTAAGAGAGCATTCTCGGGGCTGGAA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTATCACTTCCCCGTCCTaGGCGTGGACGTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVITSPS*AWTWTK
Trigger: CTTTGTCCACGTCCACGCGCAGGACGGGGAAGTGAT...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTTCAGGGGTCAAGTGGTaGCGCTCAGTGAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSSGVKW*RSVRLS
Trigger: GCTGAGCCTCACTGAGCGGCACCACTTGACCCCTGA...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCTTCCTGCAGCCTGCTaGGGGCAGGACGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKLPAAC*GQDAQL
Trigger: CAGCTGAGCGTCCTGCCCGCAGCAGGCTGCAGGAAG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACTGGTCCCATCCTTCCTaGAGCCTGCTGCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDWSHPS*SLLRAG
Trigger: TCCTGCCCGCAGCAGGCTGCAGGAAGGATGGGACCA...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACTCTGGAAAGTGGCTTaGATCTCTTGGACACACACC +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYELWKVA*ISWTHT
Trigger: GGTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCGGAAAAGCCATTCACTaGAAGTGTGGATGGCACTTG +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSGKAIH*KCGWHL
Trigger: CAAGTGCCATCCACACTTGCAGTGAATGGCTTTTCC...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGGAGGTGCAGGATGGTaGTGTACTCCATCACTTCCC +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCGGAGW*CTPSLP
Trigger: GGGAAGTGATGGAGTACACCACCATCCTGCACCTCC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCGAGGCGGGCCATGGTaGTGGTCCGGATGGTTATGT +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSRGGPW*WSGWLC
Trigger: ACATAACCATCCGGACCACCACCATGGCCCGCCTCG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTCCCGTGGCTTTGCATTaGAGGGCCACTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVPVALH*RATVSP
Trigger: GGGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGG...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTAGCTTGGAACATCTaGTGGCACGACGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEVAWNI*WHDGFI
Trigger: GATGAAACCGTCGTGCCACCAGATGTTCCAAGCTAC...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCCCAGCACAGAGCTTTaGCTGCCTGCAGGCAACGCT +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSPSTEL*LPAGNA
Trigger: AGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGGG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCCAGGCTGTAGCTCTGTaGAGTCCGGGTGATACAACC +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCQAVAL*SPGDTT
Trigger: GGTTGTATCACCCGGACTCCACAGAGCTACAGCCTG...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTCACTGCAAGTGTGGATaGCACTTGCACCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVHCKCG*HLHPWL
Trigger: GAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGTG...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGAAGGAATGGCATaGACAGGCCTGCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACCEGMA*TGLLWV
Trigger: GACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCA...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTCGATGGAATTGTTGCTaGGGTGGAGCTGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACRWNCC*GGADAG
Trigger: CCCTGCATCAGCTCCACCTCAGCAACAATTCCATCG...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCCTCGTGCCCGAAAGTaGCCTGACGGAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKPRARK*PDGGAG
Trigger: TCCTGCACCTCCGTCAGGTCACTTTCGGGCACGAGG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGGGCAGTGCTGCCGCTaGGCCTGGAAGACAGGCGTT +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIGQCCR*AWKTGV
Trigger: AACGCCTGTCTTCCAGGCGCAGCGGCAGCACTGCCC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTCCAGGTGCAGCACATaGATCTTGGACAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACSRCST*ILDSPQ
Trigger: CTGGGGACTGTCCAAGATGCATGTGCTGCACCTGGA...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGACAGGACCAACTCATaGAGCTTCTGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCDRTNS*SFWQKL
Trigger: GAGCTTCTGCCAGAAGCTGCATGAGTTGGTCCTGTC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGACTGGCGTCACATaGTTTGGGGAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSGTGVT*FGEVAI
Trigger: AATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCC...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCCTCTTGCGTTTACTGTaGTTCAGATCCAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSLLRLL*FRSKSC
Trigger: ACAGGACTTGGATCTGAAGCACAGTAAACGCAAGAG...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTAGTGTGGATGGCACTTaGACCCCTGGCTCTACAGAC +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACSVDGT*TPGSTD
Trigger: GTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACT...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTAGCAGCGCCCAGGGATaGTACCGCTGTCAACTCATT +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACSSAQG*YRCQLI
Trigger: AATGAGTTGACAGCGGTACCATCCCTGGGCGCTGCT...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACGGATGGTTATGTCGTaGGGCGTTTTGGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYERMVMS*GVLVND
Trigger: ATCATTCACCAAAACGCCCCACGACATAACCATCCG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTTGGTGGTGGTCCGGATaGTTATGTCGTGGGGCGTTT +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVWWWSG*LCRGAF
Trigger: AAACGCCCCACGACATAACCATCCGGACCACCACCA...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGTGAGTGTCGGGCTCTaGAAAGTGGCTTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCVSVGL*KVACIS
Trigger: AGAGATGCAAGCCACTTTCCAGAGCCCGACACTCAC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACAAAACCTAGCTTTTTaGTGCCAACAGCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEQNLAF*CQQQWH
Trigger: GTGCCACTGCTGTTGGCACCAAAAAGCTAGGTTTTG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTTGGCACTTGCACCCCTaGCTCTACAGACAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSWHLHP*LYRQGS
Trigger: GCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCA...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACCAAGGATGGGGTCTaGGCAGCGGGGAAATCCGTG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDTKDGV*AAGKSV
Trigger: CACGGATTTCCCCGCTGCCCAGACCCCATCCTTGGT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGTGCCCGAAAGTGACCTaGCGGAGGTGCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKCPKVT*RRCRMV
Trigger: CACCATCCTGCACCTCCGTCAGGTCACTTTCGGGCA...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCAGTGGTGCCGCTCAGTaGGGCTCAGCGGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFSGAAQ*GSAGGP
Trigger: GGGACCGCCCGCTGAGCCTCACTGAGCGGCACCACT...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGAGGCCTGCAGCATCCTaGCAATTAGCCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKRPAAS*QLATGA
Trigger: TGCCCCCGTGGCTAATTGGCAGGATGCTGCAGGCCT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCTCATGGGGGAGCTGCTaGTGCTGGCTGCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSSWGSC*CWLLSM
Trigger: CATGCTCAGCAGCCAGCAGCAGCAGCTCCCCCATGA...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCTCAGGGGTCAAGTGGTaGCGCTCAGTGAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSSGVKW*RSVRLS
Trigger: GCTGAGCCTCACTGAGCGGCACCACTTGACCCCTGA...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACATGGCGCACTTGGCTGTaGGCTGTCTCTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTWRTWL*AVSGHR
Trigger: CCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCA...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGACCCAGCGGCAGTCCTaGTGCACTGGTGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRTQRQS*CTGDVE
Trigger: CTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGT...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTCCGCGCGCTCTGGACTaGCTGAAGTTAATGAAGATG +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACPRALD*LKLMKM
Trigger: CATCTTCATTAACTTCAGGCAGTCCAGAGCGCGCGG...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCCTGGGTGATGATCTGTaGCTTCAGGAAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCLGDDL*LQEVIA
Trigger: TGCGATGACTTCCTGAAGCCACAGATCATCACCCAG...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGTCCCCGTCCTGCGCGTaGACGTGGACAAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRSPSCA*TWTKFS
Trigger: GGAGAACTTTGTCCACGTCCACGCGCAGGACGGGGA...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGAGGTGCAGGATGGTaGTGTACTCCATCACTTCCC +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSGGAGW*CTPSLP
Trigger: GGGAAGTGATGGAGTACACCACCATCCTGCACCTCC...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGGGTTTGGGTGACCTGTaGCAGCACATTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKGLGDL*QHIRGG
Trigger: CCCGCCTCGAATGTGCTGCCACAGGTCACCCAAACC...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGCCCAGCACAGAGCTTTaGCTGCCTGCAGGCAACGCT +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRPSTEL*LPAGNA
Trigger: AGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGGG...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGGCGTGGACTCGGGACTaGCGTCACATGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRAWTRD*RHMLWG
Trigger: TCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGC...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGTCCTGTCAGTGGCGTaGACTCGGGACTGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIVLSVA*TRDWRH
Trigger: GTGACGCCAGTCCCGAGTCCACGCCACTGACAGGAC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACTGGCACTTGCACCCCTaGCTCTACAGACAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDWHLHP*LYRQGS
Trigger: GCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCA...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTCTGATGTTGTTTCGCTaGAGCTTCAGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVLMLFR*SFSTSK
Trigger: CTTGGAGGTGCTGAAGCTTCAGCGAAACAACATCAG...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTCTGATGTTGTTTCGCTaGAGCTTCAGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACLMLFR*SFSTSK
Trigger: CTTGGAGGTGCTGAAGCTTCAGCGAAACAACATCAG...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATTGCTGAGGTGGAGCTaGTGCAGGGCCGTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRLLRWS*CRAVRP
Trigger: CGGCCTCACGGCCCTGCATCAGCTCCACCTCAGCAA...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCCTCCAGCCCTTGCGGTaGATGCGAGCGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSLQPLR*MRAMEL
Trigger: CAATTCCATCGCTCGCATTCACCGCAAGGGCTGGAG...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGACAGAGTCAGCTTGCTaGGGCTGTCGAGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRTESAC*GCRALR
Trigger: TCTCAGGGCTCGACAGCCTCAGCAAGCTGACTCTGT...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273261.8
CDS-3UTR TCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCACAGAGAAAATGCTCTaGCCCTTCAGTGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCTEKML*PFSDSG
Trigger: CCCAGAATCACTGAAGGGTCAGAGCATTTTCTCTGT...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTGCAACACATTCACGGTaGGCCTGGCCTTATGTGAAT +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACATHSR*AWPYVN
Trigger: ATTCACATAAGGCCAGGCTCACCGTGAATGTGTTGC...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGGGCGTTTTGGTGAATaGTGGCAACACATTCACGGT +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVGRFGE*WQHIHG
Trigger: ACCGTGAATGTGTTGCCATCATTCACCAAAACGCCC...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTCGTGGGGCGTTTTGGTaGATGATGGCAACACATTCA +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACRGAFW*MMATHS
Trigger: TGAATGTGTTGCCATCATTCACCAAAACGCCCCACG...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCACGCTCAGCTGGCTGTaGGCTCGCTCCGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFTLSWL*ARSVPR
Trigger: CCTGGGCACGGAGCGAGCTCACAGCCAGCTGAGCGT...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAATGTGCCCATTGGCCTaGGGGCCACCCTCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRMCPLA*GPPSVL
Trigger: CAGGACCGAGGGTGGCCCTCAGGCCAATGGGCACAT...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACTTCCACGGCTCTTTGTaGTACGCAGACCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDFHGSL*YADPAQ
Trigger: CTGTGCTGGGTCTGCGTATCACAAAGAGCCGTGGAA...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATGGTATGACAAGAACTaGGGTAGACAAAACCTAGCT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEWYDKN*GRQNLA
Trigger: AGCTAGGTTTTGTCTACCTCAGTTCTTGTCATACCA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACCAGATGAGTGACGCTTaGACCCAAGCTTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDQMSDA*TQASSQ
Trigger: CTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTG...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGGCTCCCCTCCACGCTaGGAATCTTGTTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTGSPPR*ESCCAA
Trigger: TGCAGCACAACAAGATTCGCAGCGTGGAGGGGAGCC...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACGGTTCCCCGTGGCTTTaGATTGGAGGGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDGSPWL*IGGPLF
Trigger: AAACAGTGGCCCTCCAATGCAAAGCCACGGGGAACC...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACATGTGAGCTCGCTCCGTaGCCAGGGTGTTGGACATCT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTCELAP*PGCWTS
Trigger: AGATGTCCAACACCCTGGGCACGGAGCGAGCTCACA...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACTTCCTGCAGCCTGCTaGGGGCAGGACGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRLPAAC*GQDAQL
Trigger: CAGCTGAGCGTCCTGCCCGCAGCAGGCTGCAGGAAG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTTGGCTGATGGAATTGTaGCTGAGACGCAGGACACTC +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSWLMEL*LRRRTL
Trigger: GAGTGTCCTGCGTCTCAGCCACAATTCCATCAGCCA...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCCCGTGGCTTTGCATTaGAGGGCCACTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKPVALH*RATVSP
Trigger: GGGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGTGTTCCATCTTATGTaGCCCAGGTGTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSVFHLM*PRCPFS
Trigger: GCTGAAGGGACACCTGGGCCACATAAGATGGAACAC...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCGCCATTTGGCGCACTTaGCTGTGCGCTGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSAIWRT*LCAVSG
Trigger: TCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGC...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCACTGCAAGTGTGGATaGCACTTGCACCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKHCKCG*HLHPWL
Trigger: GAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGTG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACGAGCCTGGCCTTATGTaGATAGGTGGAGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDEPGLM*IGGAKV
Trigger: CACTTTGGCTCCACCTATTCACATAAGGCCAGGCTC...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCTCACGACAGCAATGGTaGAGATGCCTACCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSSRQQW*RCLPWS
Trigger: GGACCACGGTAGGCATCTTCACCATTGCTGTCGTGA...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGCCAATCCGATTGCCTaGCAGGTTGAGCTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSANPIA*QVELLY
Trigger: ATAAAGGAGCTCAACCTGGCAGGCAATCGGATTGGC...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGCCCTTGCGGTGAATaGGAGCGATGGAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDSPCGE*ERWNCC
Trigger: GCAACAATTCCATCGCTCGCATTCACCGCAAGGGCT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACGACAGGACCAACTCATaGAGCTTCTGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDDRTNS*SFWQKL
Trigger: GAGCTTCTGCCAGAAGCTGCATGAGTTGGTCCTGTC...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAAAAGTTCTCCATGTCTaGATTGGTCAGGACTTCATT +
Preference number: 4 (lower is better)
Translates to: APSGACGVPPHSSLGVYEKVLHV*IGQDFI
Trigger: AATGAAGTCCTGACCAATGCAGACATGGAGAACTTT...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAATCACTTCCCCGTCCTaGGCGTGGACGTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIITSPS*AWTWTK
Trigger: CTTTGTCCACGTCCACGCGCAGGACGGGGAAGTGAT...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGTGACGTCAGGACGATaGTGCTCACGACAGCAATGG +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTVTSGR*CSRQQW
Trigger: CCATTGCTGTCGTGAGCAGCATCGTCCTGACGTCAC...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCAGAGCTTTGGCTGCCTaGAGGCAACGCTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSRALAA*RQRCEC
Trigger: ACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCT...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGAGAGCTTTGGCTGCCTaGAGGCAACGCTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKRALAA*RQRCEC
Trigger: ACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGGAAAAGCCATTCACTaGAAGTGTGGATGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LQVWMALAPLALQTGKPVGKAIH*KCGWHL
Trigger: CAAGTGCCATCCACACTTGCAGTGAATGGCTTTTCC...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGTATAGGCGGTCCGTGTaGAAAGCAGGTGTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRYRRSV*KAGVPH
Trigger: GTGCGGAACACCTGCTTTCCACACGGACCGCCTATA...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGGCACCCTCCGCAATGTaGCTGATGGAATTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRAPSAM*LMELWL
Trigger: CAGCCACAATTCCATCAGCCACATTGCGGAGGGTGC...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCCCGAAATCTCGTTATaGTCCAGATCCAAGACTCGC +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSPEISL*SRSKTR
Trigger: GCGAGTCTTGGATCTGGACCATAACGAGATTTCGGG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACGACGGAGGTGCAGGATaGTGGTGTACTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDDGGAG*WCTPSL
Trigger: AAGTGATGGAGTACACCACCATCCTGCACCTCCGTC...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGGCAATCTGAGGGTTTaGGTGACCTGTGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTGNLRV*VTCGST
Trigger: TGTGCTGCCACAGGTCACCCAAACCCTCAGATTGCC...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACTCGGGCTCTGGAAAGTaGCTTGCATCTCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDSGSGK*LASLGH
Trigger: GTGTCCAAGAGATGCAAGCCACTTTCCAGAGCCCGA...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGCCATTTGGCGCACTTaGCTGTGCGCTGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIAIWRT*LCAVSG
Trigger: TCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAGAGCTGTCCTGTCAGTaGCGTGGACTCGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRELSCQ*RGLGTG
Trigger: GCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTC...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
3UTR CAA 72 bp AAAGGAAAAGCCATTCACTGCAAGTGTGGATGGCACTaGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KGKAIHCKCGWH*HPWLYRQGSLL
Trigger: CAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGTGAATGGCTTTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCGAGCCTGGCCTTATGTaGATAGGTGGAGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSEPGLM*IGGAKV
Trigger: CACTTTGGCTCCACCTATTCACATAAGGCCAGGCTC...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGTCCTGCTGCACTGGTaGTGTGGAGAATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIVLLHW*CGECSW
Trigger: CCAAGAGCATTCTCCACATCACCAGTGCAGCAGGAC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATACAGATGAGTGACGCTTaGACCCAAGCTTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIQMSDA*TQASSQ
Trigger: CTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTG...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTCACCAAAAACTCCTGTaGACAAATGTGGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACHQKLL*TNVVVA
Trigger: GGCTACAACCACATTTGTTCACAGGAGTTTTTGGTG...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGATAAAAGGAGCTTGCTaGGGCTGTCGAGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKIKGAC*GCRALR
Trigger: TCTCAGGGCTCGACAGCCTCAGCAAGCTCCTTTTAT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS-3UTR GCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCTGCGAATCTTGTTGTaGTGCAGAAAGAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSLRILL*CRKRET
Trigger: CGTCTCTCTCTTTCTGCAGCACAACAAGATTCGCAG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGAGCCCTTGCGGTGAATaGGAGCGATGGAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKSPCGE*ERWNCC
Trigger: GCAACAATTCCATCGCTCGCATTCACCGCAAGGGCT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACGGTGTTGCAGTCACTaGATACGACCCGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRRCCSH*IRPGHR
Trigger: ACGGTGGCCGGGTCGTATGCAGTGACTGCAACACCG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGTGGCATGGACAGGCCTaGTCTGGGTCCTTAGTAGAA +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRWHGQA*SGSLVE
Trigger: TTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCA...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCGCAGGCATCTTCCTCTaGGCTCGGAGCGCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFAGIFL*ARSAKP
Trigger: CGGCTTTGCGCTCCGAGCCCAGAGGAAGATGCCTGC...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAAACTCATGCAGCTTCTaGCAGAAGCTCCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTNSCSF*QKLQPL
Trigger: CAAGGGCTGGAGCTTCTGCCAGAAGCTGCATGAGTT...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCTTCAGTGATTCTGGGTaGGCACAGGTGGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSFSDSG*AQVAVT
Trigger: TGTGACAGCCACCTGTGCCCACCCAGAATCACTGAA...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGAGCCATGGTGGTTTCTaGCTGGGTGATGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRSHGGF*LGDDLW
Trigger: CCACAGATCATCACCCAGCCAGAAACCACCATGGCT...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCTCCTGCGCGTGGACGTaGACAAAGTTCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSSCAWT*TKFSMS
Trigger: AGACATGGAGAACTTTGTCCACGTCCACGCGCAGGA...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGGACGGAGGTGCAGGATaGTGGTGTACTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKDGGAG*WCTPSL
Trigger: AAGTGATGGAGTACACCACCATCCTGCACCTCCGTC...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAGGCGGGCCATGGTGGTaGTCCGGATGGTTATGTCGT +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRGGPWW*SGWLCR
Trigger: ACGACATAACCATCCGGACCACCACCATGGCCCGCC...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACGAGGCGGGCCATGGTaGTGGTCCGGATGGTTATGT +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRRGGPW*WSGWLC
Trigger: ACATAACCATCCGGACCACCACCATGGCCCGCCTCG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCGCGGAGGGTTCCCCGTaGCTTTGCATTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFAEGSP*LCIGGP
Trigger: TGGCCCTCCAATGCAAAGCCACGGGGAACCCTCCGC...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGTCGGGCTCTGGAAAGTaGCTTGCATCTCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRSGSGK*LASLGH
Trigger: GTGTCCAAGAGATGCAAGCCACTTTCCAGAGCCCGA...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGGTGTTCCATCTTATGTaGCCCAGGTGTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKVFHLM*PRCPFS
Trigger: GCTGAAGGGACACCTGGGCCACATAAGATGGAACAC...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACGCTGCACTGGTGATGTaGAGAATGCTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDAALVM*RMLLVT
Trigger: AGTGACCAAGAGCATTCTCCACATCACCAGTGCAGC...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCAAAACCTAGCTTTTTaGTGCCAACAGCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSQNLAF*CQQQWH
Trigger: GTGCCACTGCTGTTGGCACCAAAAAGCTAGGTTTTG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCATTCACTGCAAGTGTaGATGGCACTTGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKHSLQV*MALAPL
Trigger: CAGGGGTGCAAGTGCCATCCACACTTGCAGTGAATG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCATCTGTGCGAAGGAATaGCATGGACAGGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSICAKE*HGQACS
Trigger: AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACCTGCAGCCAGCAGACTaGGATGGCTCTAATAAAAGG +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDLQPAD*DGSNKR
Trigger: CCTTTTATTAGAGCCATCCCAGTCTGCTGGCTGCAG...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS-3UTR TCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACATCAGCCTGGGTAGCTTaGATGCTCTTACAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTSAWVA*MLLQEA
Trigger: AGCTTCCTGTAAGAGCATTCAAGCTACCCAGGCTGA...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGCCGTGTCAGGTTGTTaGAGGACAGGACCAACTCAT +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIAVSGC*RTGPTH
Trigger: ATGAGTTGGTCCTGTCCTTCAACAACCTGACACGGC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCAAACTGGACAGATCTaGTCGCATTCCCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKQTGQI*SHSLQG
Trigger: ACCTTGGAGGGAATGCGATCAGATCTGTCCAGTTTG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACGTGGGGCGTTTTGGTaGATGATGGCAACACATTCA +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTRGAFW*MMATHS
Trigger: TGAATGTGTTGCCATCATTCACCAAAACGCCCCACG...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAAGTGGTGCCGCTCAGTaGGGCTCAGCGGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSSGAAQ*GSAGGP
Trigger: GGGACCGCCCGCTGAGCCTCACTGAGCGGCACCACT...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATCTGCCACCACGTTCTaGACCACCAGGAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRSATTF*TTRSWL
Trigger: CAACCAGCTCCTGGTGGTTCAGAACGTGGTGGCAGA...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGCAGATCCAAGTCCTGTaGGCGACTGATACTCCACAT +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRQIQVL*ATDTPH
Trigger: ATGTGGAGTATCAGTCGCTCACAGGACTTGGATCTG...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCAGATCCAAGTCCTGTaGGCGACTGATACTCCACAT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKQIQVL*ATDTPH
Trigger: ATGTGGAGTATCAGTCGCTCACAGGACTTGGATCTG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGGCCAAAGGAACATTTaGAGGACCTTGTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: ASVDGTCTPGSTDREACCGQRNI*RTLFLF
Trigger: AAATAGAAACAAGGTCCTTCAAATGTTCCTTTGGCC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGCCAATCCGATTGCCTaGCAGGTTGAGCTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTANPIA*QVELLY
Trigger: ATAAAGGAGCTCAACCTGGCAGGCAATCGGATTGGC...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGTGGCACAGAGAAAATaGTCTGACCCTTCAGTGATT +
Preference number: 4 (lower is better)
Translates to: QSQLSFICAKEWHGQACSVAQRK*SDPSVI
Trigger: AATCACTGAAGGGTCAGAGCATTTTCTCTGTGCCAC...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCTCGGCCCGCATCCTCTaGCACCACGTTCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFSARIL*HHVLNH
Trigger: GTGGTTCAGAACGTGGTGGCAGAGGATGCGGGCCGA...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCTGGCGCACTTGGCTGTaGGCTGTCTCTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFWRTWL*AVSGHR
Trigger: CCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCA...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATATGGCATGGACAGGCCTaGTCTGGGTCCTTAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIWHGQA*SGSLVE
Trigger: TTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCA...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAACTCATGCAGCTTCTaGCAGAAGCTCCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEINSCSF*QKLQPL
Trigger: CAAGGGCTGGAGCTTCTGCCAGAAGCTGCATGAGTT...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCTCCCCGTCCTGCGCGTaGACGTGGACAAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFSPSCA*TWTKFS
Trigger: GGAGAACTTTGTCCACGTCCACGCGCAGGACGGGGA...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGGCTTGGAACATCTGGTaGCACGACGGTTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRAWNIW*HDGFIC
Trigger: ACAGATGAAACCGTCGTGCCACCAGATGTTCCAAGC...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGGCTTGGAACATCTGGTaGCACGACGGTTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKAWNIW*HDGFIC
Trigger: ACAGATGAAACCGTCGTGCCACCAGATGTTCCAAGC...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGAGAAGAGAGGTAGCTTaGAACATCTGGTGGCACGAC +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRRREVA*NIWWHD
Trigger: GTCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCT...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATGTGGAGAATGCTCTTaGTCACTCCCACCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRCGECS*SLPPGS
Trigger: GGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACA...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATATGGGGAGGTGGCCATTaGAAACAAGCAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIWGGGH*KQASTG
Trigger: CCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCA...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAGAGGCTGTCGAGCCCTaGGAAGGCGCCGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSEAVEP*EGAARV
Trigger: GACACGAGCGGCGCCTTCTCAGGGCTCGACAGCCTC...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGGGCGTTTTGGTGAATaGTGGCAACACATTCACGGT +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIGRFGE*WQHIHG
Trigger: ACCGTGAATGTGTTGCCATCATTCACCAAAACGCCC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATCCTGGTCTGGTAGATaGTGCACACCCAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRSWSGR*CTPRPV
Trigger: CACTGGTCTGGGTGTGCATCATCTACCAGACCAGGA...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGCTATGTACAGATGAGTaGCGCTTGAACCCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRLCTDE*RLNPSF
Trigger: GAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAG...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCTATGTACAGATGAGTaGCGCTTGAACCCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKLCTDE*RLNPSF
Trigger: GAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGTCCTGTGAGCGACTaGTACTCCACATGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEISPVSD*YSTWEL
Trigger: TAACTCCCATGTGGAGTATCAGTCGCTCACAGGACT...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAGCAGCCCGAGCTCGGTaGCGGCAGGCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLAARAR*RQASSS
Trigger: AGAGGAAGATGCCTGCCGGCACCGAGCTCGGGCTGC...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAGGCCGAGGGCAGTGCTaGCGCTGCGCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSGRGQC*RCAWKT
Trigger: TGTCTTCCAGGCGCAGCGGCAGCACTGCCCTCGGCC...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAGCCCCAAGTTCTCTCTaGGGCCGCGGCTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSAPSSL*GRGSGT
Trigger: AGTGCCGGAGCCGCGGCCGCAGAGAGAACTTGGGGC...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACTGCGAATCTTGTTGTaGTGCAGAAAGAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTLRILL*CRKRET
Trigger: CGTCTCTCTCTTTCTGCAGCACAACAAGATTCGCAG...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTAAAGTTCTCCATGTCTaGATTGGTCAGGACTTCATT +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACKVLHV*IGQDFI
Trigger: AATGAAGTCCTGACCAATGCAGACATGGAGAACTTT...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGTTGGACACACACCATTaGTCTCAATGTGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKLDTHH*SQCAHW
Trigger: CCAATGGGCACATTGAGAGCAATGGTGTGTGTCCAA...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACAGCGGCAGTCCTGCTaGACTGGTGATGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRQRQSC*TGDVEN
Trigger: ATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTACCAGTCTCAAAAGTaGAAATTATACCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: TASVDGTCTPGSTDREACYQSQK*KLYPEP
Trigger: GGGTTCTGGGTATAATTTGCACTTTTGAGACTGGTA...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCCACGAAACTCTCTGGTaGCACAGAGAAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSHETLW*HRENAL
Trigger: CAGAGCATTTTCTCTGTGCCACCAGAGAGTTTCGTG...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGCACACGAAACTCTCTaGTGGCACAGAGAAAATGCT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTAHETL*WHRENA
Trigger: AGCATTTTCTCTGTGCCACCAGAGAGTTTCGTGTGC...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTACGGCTCCGGGCCATTTaGCGCACTTGGCTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLRLRAI*RTWLCA
Trigger: AGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCG...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAGAAACAAGCAAGTACTaGGCTTCCGCGCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRETSKY*ASARSG
Trigger: TCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTC...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGTGTTCCGCACTTCCGTaGTGTTGTTCAAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKCSALP*CCSNSD
Trigger: ATCTGAGTTTGAACAACATCACGGAAGTGCGGAACA...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCATCTGTCAGTTTGCTaGTGTTGTTTCGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKHLSVC*CCFAEA
Trigger: AGCTTCAGCGAAACAACATCAGCAAACTGACAGATG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACATCTGTCAGTTTGCTaGTGTTGTTTCGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTHLSVC*CCFAEA
Trigger: AGCTTCAGCGAAACAACATCAGCAAACTGACAGATG...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAGGCCACCCTCGGTCCTaGCCACGGTTTCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLGHPRS*PRFLVG
Trigger: ACCGACAAGAAACCGTGGTCAGGACCGAGGGTGGCC...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGACAACTATGTACAGATaGGTGACGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKTTMYR*VTLEPK
Trigger: CTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCACAACTATGTACAGATaGGTGACGCTTGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSTTMYR*VTLEPK
Trigger: CTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGT...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCGAATCTTGTTGTGCTaGAGAAAGAGAGAGACGACA +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKRILLC*RKRETT
Trigger: TGTCGTCTCTCTCTTTCTGCAGCACAACAAGATTCG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAGCAGGACACTCAGGCTaGTCAGCTCGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLAGHSG*SARPGS
Trigger: AGAGCCTGGCCGAGCTGAGCAGCCTGAGTGTCCTGC...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACATCGTGTCCTCTATTGTaGCCGAAATCTCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTSCPLL*PKSRYG
Trigger: ACCATAACGAGATTTCGGGCACAATAGAGGACACGA...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGTCGTGTCCTCTATTGTaGCCGAAATCTCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRSCPLL*PKSRYG
Trigger: ACCATAACGAGATTTCGGGCACAATAGAGGACACGA...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTACCTCCAAGGTTCAGGTaGTCCAGGCCTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLPPRFR*SRPSSP
Trigger: GGGGCTGGAAGGCCTGGAGCACCTGAACCTTGGAGG...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAAGGTCATGGGGGAGCTaGTGCTGCTGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLRSWGS*CCWLLS
Trigger: GCTCAGCAGCCAGCAGCAGCAGCTCCCCCATGACCT...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCGTGACGTCAGGACGATaGTGCTCACGACAGCAATGG +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFVTSGR*CSRQQW
Trigger: CCATTGCTGTCGTGAGCAGCATCGTCCTGACGTCAC...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGCTCTTGCGTTTACTGTaGTTCAGATCCAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PSFYALQTDRFYALQTDRLLRLL*FRSKSC
Trigger: ACAGGACTTGGATCTGAAGCACAGTAAACGCAAGAG...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGCTCAGTTTCATCTGTaGGAAGGAATGGCATGGACA +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIAQFHL*EGMAWT
Trigger: TGTCCATGCCATTCCTTCGCACAGATGAAACTGAGC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCTCCCTCTTTCACATTaGCTCTCAGAAGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKLPLSH*LSEAAN
Trigger: ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCCTCCCTCTTTCACATTaGCTCTCAGAAGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSLPLSH*LSEAAN
Trigger: ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAG...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGCTCTTACAGGAAGCTaGGTGATCCTGTTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIALTGS*VILFLL
Trigger: GAGCAAAAACAGGATCACCCAGCTTCCTGTAAGAGC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACAAAGGCATCAAACTaGACAGATCTGATCGCATTC +
Preference number: 4 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDTKASN*TDLIAF
Trigger: GAATGCGATCAGATCTGTCCAGTTTGATGCCTTTGT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATACACGAAACTCTCTGGTaGCACAGAGAAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIHETLW*HRENAL
Trigger: CAGAGCATTTTCTCTGTGCCACCAGAGAGTTTCGTG...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAAGCCATGGTGGTTTCTaGCTGGGTGATGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRSHGGF*LGDDLW
Trigger: CCACAGATCATCACCCAGCCAGAAACCACCATGGCT...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCGGCAATCTGAGGGTTTaGGTGACCTGTGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFGNLRV*VTCGST
Trigger: TGTGCTGCCACAGGTCACCCAAACCCTCAGATTGCC...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAGTGAGTGTCGGGCTCTaGAAAGTGGCTTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRVSVGL*KVACIS
Trigger: AGAGATGCAAGCCACTTTCCAGAGCCCGACACTCAC...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCGGAAGGCTTGTCCCCTaGAGTAACAGTCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFGRLVP*SNSPLR
Trigger: CCGAAGTGGACTGTTACTCCAGGGGACAAGCCTTCC...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATGGGGAGGTGGCCATTaGAAACAAGCAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRWGGGH*KQASTG
Trigger: CCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCA...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACATTCACTGCAAGTGTaGATGGCACTTGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRHSLQV*MALAPL
Trigger: CAGGGGTGCAAGTGCCATCCACACTTGCAGTGAATG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAGGCCACCCTCGGTCCTaGCCACGGTTTCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSGHPRS*PRFLVG
Trigger: ACCGACAAGAAACCGTGGTCAGGACCGAGGGTGGCC...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACTGACCTTTTGCTTGTaGTGGATTAACAACCCTCAT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTLTFCL*WINNPH
Trigger: ATGAGGGTTGTTAATCCATCACAAGCAAAAGGTCAG...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATTCCAGCCCCGAGAATaGTCTCTTAGCCACAGACTT +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRFQPRE*SLSHRL
Trigger: AAGTCTGTGGCTAAGAGAGCATTCTCGGGGCTGGAA...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCCTCCAAGGTTCAGGTaGTCCAGGCCTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANPPRFR*SRPSSP
Trigger: GGGGCTGGAAGGCCTGGAGCACCTGAACCTTGGAGG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAACAGCTGTAAACCCCTaGGTCATCTATTTTCACATC +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTTAVNP*VIYFHI
Trigger: GATGTGAAAATAGATGACGCAGGGGTTTACAGCTGT...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273261.8
CDS-3UTR GCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCATGGTCCCATCCTTCCTaGAGCCTGCTGCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSWSHPS*SLLRAG
Trigger: TCCTGCCCGCAGCAGGCTGCAGGAAGGATGGGACCA...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGACACAAATCCCCTCTTaGGTTTACTGTGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKTQIPS*VYCASD
Trigger: ATCTGAAGCACAGTAAACGCAAGAGGGGATTTGTGT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACTGGGTGATGATCTGTaGCTTCAGGAAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRLGDDL*LQEVIA
Trigger: TGCGATGACTTCCTGAAGCCACAGATCATCACCCAG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAATGGTGGTTTCTGGCTaGGTGATGATCTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRMVVSG*VMICGF
Trigger: GAAGCCACAGATCATCACCCAGCCAGAAACCACCAT...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACATCTCCATGTCTGCATTaGTCAGGACTTCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTSPCLH*SGLHCL
Trigger: AAGACAATGAAGTCCTGACCAATGCAGACATGGAGA...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATGGTGCCAACAGCAGTaGCACCCTCTGTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLWCQQQ*HPLFPG
Trigger: CCCGGGAAACAGAGGGTGCCACTGCTGTTGGCACCA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCATCTGTGCGAAGGAATaGCATGGACAGGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFICAKE*HGQACS
Trigger: AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGCCCCCAGCAGACATATaGGGCTGGGACGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILPPADI*GWDGEL
Trigger: CAGCTCCCCGTCCCAGCCCCATATGTCTGCTGGGGG...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCTGCAGGCAACGCTGTaGGTGTCGGGCTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANLQATL*VSGSGK
Trigger: CTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGGCCAAAGGAACATTTaGAGGACCTTGTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTGQRNI*RTLFLF
Trigger: AAATAGAAACAAGGTCCTTCAAATGTTCCTTTGGCC...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATCATCCGGCATGACATaGATGCGTCGCTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLSSGMT*MRRSRA
Trigger: TGCCCGTGAGCGACGCATGCATGTCATGCCGGATGA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273261.8
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATGTGAGCTCGCTCCGTaGCCAGGGTGTTGGACATCT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLCELAP*PGCWTS
Trigger: AGATGTCCAACACCCTGGGCACGGAGCGAGCTCACA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCACGGTGTTGCAGTCACTaGATACGACCCGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSRCCSH*IRPGHR
Trigger: ACGGTGGCCGGGTCGTATGCAGTGACTGCAACACCG...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAGGGACTGGCGTCACATaGTTTGGGGAGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLGTGVT*FGEVAI
Trigger: AATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCC...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGTATAAATTCCAGCCATaGGTTAAGGCACCAGAACTA +
Preference number: 4 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKYKFQP*VKAPEL
Trigger: TAGTTCTGGTGCCTTAACGCATGGCTGGAATTTATA...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGGCAGGCATCTTCCTCTaGGCTCGGAGCGCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILAGIFL*ARSAKP
Trigger: CGGCTTTGCGCTCCGAGCCCAGAGGAAGATGCCTGC...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAGCTCTTACAGGAAGCTaGGTGATCCTGTTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRALTGS*VILFLL
Trigger: GAGCAAAAACAGGATCACCCAGCTTCCTGTAAGAGC...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGGCGGGCCATGGTGGTaGTCCGGATGGTTATGTCGT +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANGGPWW*SGWLCR
Trigger: ACGACATAACCATCCGGACCACCACCATGGCCCGCC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAGGTTTGGGTGACCTGTaGCAGCACATTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSGLGDL*QHIRGG
Trigger: CCCGCCTCGAATGTGCTGCCACAGGTCACCCAAACC...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATGTGGAGAATGCTCTTaGTCACTCCCACCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLCGECS*SLPPGS
Trigger: GGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCGCTGCACTGGTGATGTaGAGAATGCTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFAALVM*RMLLVT
Trigger: AGTGACCAAGAGCATTCTCCACATCACCAGTGCAGC...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCATGGTGCCAACAGCAGTaGCACCCTCTGTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSWCQQQ*HPLFPG
Trigger: CCCGGGAAACAGAGGGTGCCACTGCTGTTGGCACCA...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTCCTTCCGGCGCATGTaGAGTCCCACCGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILSFRRM*SPTAQQ
Trigger: CTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCTCCAGCCCTTGCGGTaGATGCGAGCGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANLQPLR*MRAMEL
Trigger: CAATTCCATCGCTCGCATTCACCGCAAGGGCTGGAG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGCTGCTGCTGGCTGCTaGGCATGTAAACCGGATGTC +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANAAAGC*ACKPDV
Trigger: GACATCCGGTTTACATGCTCAGCAGCCAGCAGCAGC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGACCCAGCGGCAGTCCTaGTGCACTGGTGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILTQRQS*CTGDVE
Trigger: CTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGT...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAGCAGCACATGCATCTTaGACAGTCCCCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSAAHAS*TVPRRP
Trigger: GGGCCTTCTGGGGACTGTCCAAGATGCATGTGCTGC...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTCCAGGCAAAGGTCATaGGGGAGCTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILSRQRS*GSCCCW
Trigger: CCAGCAGCAGCAGCTCCCCCATGACCTTTGCCTGGA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAATTCGAGGCGGGCCATaGTGGTGGTCCGGATGGTTA +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSIRGGP*WWSGWL
Trigger: TAACCATCCGGACCACCACCATGGCCCGCCTCGAAT...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCATTGTCAGGGGTCAAGTaGTGCCGCTCAGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSLSGVK*CRSVRL
Trigger: GAGCCTCACTGAGCGGCACCACTTGACCCCTGACAA...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTGCGAAGGAATGGCATaGACAGGCCTGCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANCEGMA*TGLLWV
Trigger: GACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCA...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAGCCGTGTCAGGTTGTTaGAGGACAGGACCAACTCAT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLAVSGC*RTGPTH
Trigger: ATGAGTTGGTCCTGTCCTTCAACAACCTGACACGGC...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCATTCCACGGCTCTTTGTaGTACGCAGACCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSFHGSL*YADPAQ
Trigger: CTGTGCTGGGTCTGCGTATCACAAAGAGCCGTGGAA...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGTCCTGCTGCACTGGTaGTGTGGAGAATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANVLLHW*CGECSW
Trigger: CCAAGAGCATTCTCCACATCACCAGTGCAGCAGGAC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCCGAATCTTGTTGTGCTaGAGAAAGAGAGAGACGACA +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFRILLC*RKRETT
Trigger: TGTCGTCTCTCTCTTTCTGCAGCACAACAAGATTCG...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAAGCAGCGCCCAGGGATaGTACCGCTGTCAACTCATT +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSSSAQG*YRCQLI
Trigger: AATGAGTTGACAGCGGTACCATCCCTGGGCGCTGCT...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATGGCTGATGGAATTGTaGCTGAGACGCAGGACACTC +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLWLMEL*LRRRTL
Trigger: GAGTGTCCTGCGTCTCAGCCACAATTCCATCAGCCA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTTGTCAGGGGTCAAGTaGTGCCGCTCAGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILLSGVK*CRSVRL
Trigger: GAGCCTCACTGAGCGGCACCACTTGACCCCTGACAA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGGAAGGCTTGTCCCCTaGAGTAACAGTCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANGRLVP*SNSPLR
Trigger: CCGAAGTGGACTGTTACTCCAGGGGACAAGCCTTCC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCACAGGCTGTAGCTCTGTaGAGTCCGGGTGATACAACC +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSQAVAL*SPGDTT
Trigger: GGTTGTATCACCCGGACTCCACAGAGCTACAGCCTG...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGCGATGGAATTGTTGCTaGGGTGGAGCTGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILRWNCC*GGADAG
Trigger: CCCTGCATCAGCTCCACCTCAGCAACAATTCCATCG...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCTTTCATCTGTGTTGGTaGCACTGTACTCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFFHLCW*HCTLHS
Trigger: AGAGTGAAGAGTACAGTGTCACCAACACAGATGAAA...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGCTGTCACAAAGGCCTaGAGCATCCTGCCAATTAGC +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANAVTKA*SILPIS
Trigger: GCTAATTGGCAGGATGCTGCAGGCCTTTGTGACAGC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCCGCGCGCTCTGGACTaGCTGAAGTTAATGAAGATG +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANPRALD*LKLMKM
Trigger: CATCTTCATTAACTTCAGGCAGTCCAGAGCGCGCGG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCACACAAATCCCCTCTTaGGTTTACTGTGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFTQIPS*VYCASD
Trigger: ATCTGAAGCACAGTAAACGCAAGAGGGGATTTGTGT...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTACCCGAAATCTCGTTATaGTCCAGATCCAAGACTCGC +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLPEISL*SRSKTR
Trigger: GCGAGTCTTGGATCTGGACCATAACGAGATTTCGGG...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCATTCAGTGATTCTGGGTaGGCACAGGTGGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSFSDSG*AQVAVT
Trigger: TGTGACAGCCACCTGTGCCCACCCAGAATCACTGAA...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAGTAGCTTGGAACATCTaGTGGCACGACGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLVAWNI*WHDGFI
Trigger: GATGAAACCGTCGTGCCACCAGATGTTCCAAGCTAC...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTTCTATCGTGGTTACTaGGGTAGAGCGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANFYRGY*GRATLG
Trigger: GCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAA...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATTGGCACTCATAAGATaGTTAGCTACCAGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SKSCERLILHMGVTTMYRLALIR*LATSLK
Trigger: TTTGAGACTGGTAGCTAACCATCTTATGAGTGCCAA...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAACAGAGAAAATGCTCTaGCCCTTCAGTGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLTEKML*PFSDSG
Trigger: CCCAGAATCACTGAAGGGTCAGAGCATTTTCTCTGT...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGCAACACATTCACGGTaGGCCTGGCCTTATGTGAAT +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANATHSR*AWPYVN
Trigger: ATTCACATAAGGCCAGGCTCACCGTGAATGTGTTGC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCTGTGGAGTCCGGGTaGTACAACCTTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANSVESG*YNLAKV
Trigger: GACTTTAGCAAGGTTGTATCACCCGGACTCCACAGA...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATAGTCCTGTGAGCGACTaGTACTCCACATGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANSPVSD*YSTWEL
Trigger: TAACTCCCATGTGGAGTATCAGTCGCTCACAGGACT...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGGCTGTCACAAAGGCCTaGAGCATCCTGCCAATTAGC +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILAVTKA*SILPIS
Trigger: GCTAATTGGCAGGATGCTGCAGGCCTTTGTGACAGC...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGAGTCCACTTCGGTGTTaGAGTCACTGCATACGACCC +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILSPLRC*SHCIRP
Trigger: GGGTCGTATGCAGTGACTGCAACACCGAAGTGGACT...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATAACCTAGCTTTTTGGTaGCAACAGCAGTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANNLAFW*QQQWHP
Trigger: AGGGTGCCACTGCTGTTGGCACCAAAAAGCTAGGTT...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAAACCTAGCTTTTTGGTaGCAACAGCAGTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSNLAFW*QQQWHP
Trigger: AGGGTGCCACTGCTGTTGGCACCAAAAAGCTAGGTT...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAGCTCAGTTTCATCTGTaGGAAGGAATGGCATGGACA +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLAQFHL*EGMAWT
Trigger: TGTCCATGCCATTCCTTCGCACAGATGAAACTGAGC...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCTACCAGTCTCAAAAGTaGAAATTATACCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFYQSQK*KLYPEP
Trigger: GGGTTCTGGGTATAATTTGCACTTTTGAGACTGGTA...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCAATGGTGGTTTCTGGCTaGGTGATGATCTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSMVVSG*VMICGF
Trigger: GAAGCCACAGATCATCACCCAGCCAGAAACCACCAT...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTACGGATGGTTATGTCGTaGGGCGTTTTGGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLRMVMS*GVLVND
Trigger: ATCATTCACCAAAACGCCCCACGACATAACCATCCG...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGCAAACTGGACAGATCTaGTCGCATTCCCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILQTGQI*SHSLQG
Trigger: ACCTTGGAGGGAATGCGATCAGATCTGTCCAGTTTG...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTCTGTGGAGTCCGGGTaGTACAACCTTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILSVESG*YNLAKV
Trigger: GACTTTAGCAAGGTTGTATCACCCGGACTCCACAGA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGAGAAGAGAGGTAGCTTaGAACATCTGGTGGCACGAC +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILRREVA*NIWWHD
Trigger: GTCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCT...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGTGGCACAGAGAAAATaGTCTGACCCTTCAGTGATT +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANVAQRK*SDPSVI
Trigger: AATCACTGAAGGGTCAGAGCATTTTCTCTGTGCCAC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTTGGACACACACCATTaGTCTCAATGTGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILLDTHH*SQCAHW
Trigger: CCAATGGGCACATTGAGAGCAATGGTGTGTGTCCAA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATCTCCATGTCTGCATTaGTCAGGACTTCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLSPCLH*SGLHCL
Trigger: AAGACAATGAAGTCCTGACCAATGCAGACATGGAGA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTGTTCCGCACTTCCGTaGTGTTGTTCAAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILCSALP*CCSNSD
Trigger: ATCTGAGTTTGAACAACATCACGGAAGTGCGGAACA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCATTTCATCTGTGTTGGTaGCACTGTACTCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: YIKVILPLSHCLSEAANSFHLCW*HCTLHS
Trigger: AGAGTGAAGAGTACAGTGTCACCAACACAGATGAAA...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTGGTATGACAAGAACTaGGGTAGACAAAACCTAGCT +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANWYDKN*GRQNLA
Trigger: AGCTAGGTTTTGTCTACCTCAGTTCTTGTCATACCA...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGCACCAAAAACTCCTGTaGACAAATGTGGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILHQKLL*TNVVVA
Trigger: GGCTACAACCACATTTGTTCACAGGAGTTTTTGGTG...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR TCA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATCTGACCTTTTGCTTGTaGTGGATTAACAACCCTCAT +
Preference number: 4 (lower is better)
Translates to: LYIKVILPLSHCLSEAANLTFCL*WINNPH
Trigger: ATGAGGGTTGTTAATCCATCACAAGCAAAAGGTCAG...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR GCA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATATAAATTCCAGCCATaGGTTAAGGCACCAGAACTA +
Preference number: 4 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLYKFQP*VKAPEL
Trigger: TAGTTCTGGTGCCTTAACGCATGGCTGGAATTTATA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CCA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTTGGCACTCATAAGATaGTTAGCTACCAGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILLALIR*LATSLK
Trigger: TTTGAGACTGGTAGCTAACCATCTTATGAGTGCCAA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 90 bp AGGTGTACCCAGCCTGCGCTCTTCGTCCGCCCGGGGCACGCCGAGTaGCGCTACCGACACCGGCCGAGGGCAGTGCTGCCGCTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: RCTQPALFVRPGHAE*RYRHRPRAVLPLRL
Trigger: CAGGCGCAGCGGCAGCACTGCCCTCGGCCGGTGTCGGTAGCGGCACTCGGCGTGCCCCGGGCGGACGAAGAGCGCAGGCTGGGTACACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 90 bp ACGCCGAGTGCCGCTACCGACACCGGCCGAGGGCAGTGCTGCCGCTaGGCCTGGAAGACAGGCGTTCAGCCCCGCAGCCCGAGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: TPSAATDTGRGQCCR*AWKTGVQPRSPSSV
Trigger: CACCGAGCTCGGGCTGCGGGGCTGAACGCCTGTCTTCCAGGCGCAGCGGCAGCACTGCCCTCGGCCGGTGTCGGTAGCGGCACTCGGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CCA 90 bp GCCACGCCTCCCCGCCTGCTGCTCATTGGCTGCCGGAGTCCACCGTaGCCAGCCTCGAGGGCCATTGGAGCGCTCGCTGTGATCCCGCCC +
Preference number: 5 (lower is better)
Translates to: ATPPRLLLIGCRSPP*PASRAIGALAVIPP
Trigger: GGGCGGGATCACAGCGAGCGCTCCAATGGCCCTCGAGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS GCA 90 bp TTGCAACAGCGCCCCGCCACGCCTCCCCGCCTGCTGCTCATTGGCTaGCGGAGTCCACCGTGGCCAGCCTCGAGGGCCATTGGAGCGCTC +
Preference number: 5 (lower is better)
Translates to: LQQRPATPPRLLLIG*RSPPWPASRAIGAL
Trigger: GAGCGCTCCAATGGCCCTCGAGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS GCA 90 bp GCGCTAGCTGCGAACTCCGCCGATTCGGGCAAGGTGTACCCAGCCTaGGCTCTTCGTCCGCCCGGGGCACGCCGAGTGCCGCTACCGACA +
Preference number: 5 (lower is better)
Translates to: ALAANSADSGKVYPA*ALRPPGARRVPLPT
Trigger: TGTCGGTAGCGGCACTCGGCGTGCCCCGGGCGGACGAAGAGCGCAGGCTGGGTACACCTTGCCCGAATCGGCGGAGTTCGCAGCTAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 90 bp CGTTGGATGCTTTGCAACAGCGCCCCGCCACGCCTCCCCGCCTGCTaGTCATTGGCTGCCGGAGTCCACCGTGGCCAGCCTCGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: RWMLCNSAPPRLPAC*SLAAGVHRGQPRGP
Trigger: TGGCCCTCGAGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAAAGCATCCAACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS GCA 90 bp CCACGTTGGATGCTTTGCAACAGCGCCCCGCCACGCCTCCCCGCCTaGTGCTCATTGGCTGCCGGAGTCCACCGTGGCCAGCCTCGAGGG +
Preference number: 5 (lower is better)
Translates to: PRWMLCNSAPPRLPA*CSLAAGVHRGQPRG
Trigger: CCCTCGAGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAAAGCATCCAACGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS CCA 90 bp TGCTTTGCAACAGCGCCCCGCCACGCCTCCCCGCCTGCTGCTCATTaGCTGCCGGAGTCCACCGTGGCCAGCCTCGAGGGCCATTGGAGC +
Preference number: 5 (lower is better)
Translates to: CFATAPRHASPPAAH*LPESTVASLEGHWS
Trigger: GCTCCAATGGCCCTCGAGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAAAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS TCA 90 bp CCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTaGTGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: PWHSGQDPAAVLLHW*CGECSWSLPPGSGP
Trigger: TGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTaGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: ALGAGPSGSPAALVM*RMLLVTPTRLRAIW
Trigger: CCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp CTGGGGCTCAAATCGCTGAGGGTTCCACCCTGGGCCTGGCTGGTTTaGGAACAGGGCTACTGGCCTGTCTCTGAGCCCTCCCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LGLKSLRVPPWAWLV*EQGYWPVSEPSPRP
Trigger: TGGCCTCGGGGAGGGCTCAGAGACAGGCCAGTAGCCCTGTTCCCAAACCAGCCAGGCCCAGGGTGGAACCCTCAGCGATTTGAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491821.1
CDS TCA 90 bp ACCCTGGGCCTGGCTGGTTTGGGAACAGGGCTACTGGCCTGTCTCTaGGCCCTCCCCGAGGCCACTGTGTGGTGGAACGAACCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: TLGLAGLGTGLLACL*ALPEATVWWNEPGL
Trigger: TAGGCCTGGTTCGTTCCACCACACAGTGGCCTCGGGGAGGGCTCAGAGACAGGCCAGTAGCCCTGTTCCCAAACCAGCCAGGCCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491821.1
CDS GCA 90 bp AATGGTGAAGATGCCTACCGTGGTCCCATCCTTCCTGCAGCCTGCTaGGGGCAGGACGCTCAGCTGGCTGTGAGCTCGCTCCGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: NGEDAYRGPILPAAC*GQDAQLAVSSLRAQ
Trigger: CTGGGCACGGAGCGAGCTCACAGCCAGCTGAGCGTCCTGCCCGCAGCAGGCTGCAGGAAGGATGGGACCACGGTAGGCATCTTCACCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 90 bp AGCAATGGTGAAGATGCCTACCGTGGTCCCATCCTTCCTGCAGCCTaGTGCGGGCAGGACGCTCAGCTGGCTGTGAGCTCGCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: SNGEDAYRGPILPAA*CGQDAQLAVSSLRA
Trigger: GGCACGGAGCGAGCTCACAGCCAGCTGAGCGTCCTGCCCGCAGCAGGCTGCAGGAAGGATGGGACCACGGTAGGCATCTTCACCATTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 90 bp AGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTaGACTGGTGATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCT +
Preference number: 5 (lower is better)
Translates to: RATLGTRGRTQRQSC*TGDVENALGHSHPA
Trigger: AGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 90 bp GGTAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTaGTGCACTGGTGATGTGGAGAATGCTCTTGGTCACTCCCACCCG +
Preference number: 5 (lower is better)
Translates to: GRATLGTRGRTQRQS*CTGDVENALGHSHP
Trigger: CGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp CACCCGGCTCCGGGCCATTTGGCGCACTTGGCTGTGCGCTGTCTCTaGACACAGGCTGGGGGTGGAAGGCTTGTCCCCTGGAGTAACAGT +
Preference number: 5 (lower is better)
Translates to: HPAPGHLAHLAVRCL*TQAGGGRLVPWSNS
Trigger: ACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp ATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTaGCTGTGCGCTGTCTCTGGACACAGGCTGGGGGTGGAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: MLLVTPTRLRAIWRT*LCAVSGHRLGVEGL
Trigger: CAAGCCTTCCACCCCCAGCCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GCAGTGGCACCCTCTGTTTCCCGGGGAGCTGTCCTGTCAGTGGCGTaGACTCGGGACTGGCGTCACATGCTTTGGGGAGGTGGCCATTGG +
Preference number: 5 (lower is better)
Translates to: AVAPSVSRGAVLSVA*TRDWRHMLWGGGHW
Trigger: CCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCCGGGAAACAGAGGGTGCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp CAACAGCAGTGGCACCCTCTGTTTCCCGGGGAGCTGTCCTGTCAGTaGCGTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: QQQWHPLFPGELSCQ*RGLGTGVTCFGEVA
Trigger: GGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCCGGGAAACAGAGGGTGCCACTGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCGGCCATTTGGCGCACTaGGCTGTGCGCTGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSGHLAH*AVRCLW
Trigger: CCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCC...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CCA 90 bp ATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTaGCGCACTTGGCTGTGCGCTGTCTCTGGACACAGGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: MWRMLLVTPTRLRAI*RTWLCAVSGHRLGV
Trigger: CACCCCCAGCCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp AGGAAGGGACTGGGGCTCAAATCGCTGAGGGTTCCACCCTGGGCCTaGCTGGTTTGGGAACAGGGCTACTGGCCTGTCTCTGAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RKGLGLKSLRVPPWA*LVWEQGYWPVSEPS
Trigger: GGAGGGCTCAGAGACAGGCCAGTAGCCCTGTTCCCAAACCAGCCAGGCCCAGGGTGGAACCCTCAGCGATTTGAGCCCCAGTCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491821.1
CDS-3UTR CAA 90 bp ACTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTGGGGTAGAGCGACCCTaGGCACTCGGGGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: TASVDGTCTPGSTDREACGVERP*ALGAGP
Trigger: GGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCC...ACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CCA 90 bp GCGTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGGTGGCCATTaGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: AWTRDWRHMLWGGGH*KQASTGLPRALDCL
Trigger: CAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCATGTGGAGAATGCTCTaGGTCACTCCCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSMWRML*VTPTRL
Trigger: GAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACAT...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 90 bp CCCAGACCAGTGACGTCAGGACGATGCTGCTCACGACAGCAATGGTaGAGATGCCTACCGTGGTCCCATCCTTCCTGCAGCCTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: PRPVTSGRCCSRQQW*RCLPWSHPSCSLLR
Trigger: CCGCAGCAGGCTGCAGGAAGGATGGGACCACGGTAGGCATCTTCACCATTGCTGTCGTGAGCAGCATCGTCCTGACGTCACTGGTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 90 bp CCCTTCAGTGATTCTGGGTGGGCACAGGTGGCTGTCACAAAGGCCTaGAGCATCCTGCCAATTAGCCACGGGGGCAGCCACTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PFSDSGWAQVAVTKA*SILPISHGGSHFSW
Trigger: CCAGCTGAAGTGGCTGCCCCCGTGGCTAATTGGCAGGATGCTGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAGAATCACTGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp CTGAGTCCCTTGAAGGCACCCTCCGCAATGTGGCTGATGGAATTGTaGCTGAGACGCAGGACACTCAGGCTGCTCAGCTCGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LSPLKAPSAMWLMEL*LRRRTLRLLSSARL
Trigger: GAGCCTGGCCGAGCTGAGCAGCCTGAGTGTCCTGCGTCTCAGCCACAATTCCATCAGCCACATTGCGGAGGGTGCCTTCAAGGGACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CCA 90 bp GCTGTCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATGCTTTaGGGAGGTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCGC +
Preference number: 5 (lower is better)
Translates to: AVLSVAWTRDWRHML*GGGHWKQASTGLPR
Trigger: GCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGCGGGCGGTCCCCCTaGAACCAGGTGATGCGGGGC +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDSGRSP*NQVMRG
Trigger: GCCCCGCATCACCTGGTTCAAGGGGGACCGCCCGCT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 90 bp ATTCTGGGTGGGCACAGGTGGCTGTCACAAAGGCCTGCAGCATCCTaGCAATTAGCCACGGGGGCAGCCACTTCAGCTGGCAGTCACACA +
Preference number: 5 (lower is better)
Translates to: ILGGHRWLSQRPAAS*QLATGAATSAGSHT
Trigger: TGTGTGACTGCCAGCTGAAGTGGCTGCCCCCGTGGCTAATTGGCAGGATGCTGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 90 bp GGGGAGCTGTCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATaGTTTGGGGAGGTGGCCATTGGAAACAAGCAAGTACTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: GELSCQWRGLGTGVT*FGEVAIGNKQVLGF
Trigger: GAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GTGCGCTGTCTCTGGACACAGGCTGGGGGTGGAAGGCTTGTCCCCTaGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCC +
Preference number: 5 (lower is better)
Translates to: VRCLWTQAGGGRLVP*SNSPLRCCSHCIRP
Trigger: GGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCTGTGTCCAGAGACAGCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCGTCAGCCTGGGTAGCTaGAATGCTCTTACAGGAAGC +
Preference number: 5 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSVSLGS*NALTGS
Trigger: GCTTCCTGTAAGAGCATTCAAGCTACCCAGGCTGAC...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCGGGTTCCCCGTGGCTTaGCATTGGAGGGCCACTGTT +
Preference number: 5 (lower is better)
Translates to: ASVDGTCTPGSTDREACCGFPVA*HWRATV
Trigger: AACAGTGGCCCTCCAATGCAAAGCCACGGGGAACCC...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAAGCGGGCGGTCCCCCTaGAACCAGGTGATGCGGGGC +
Preference number: 5 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTSGRSP*NQVMRG
Trigger: GCCCCGCATCACCTGGTTCAAGGGGGACCGCCCGCT...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACCGGCTCCGGGCCATTaGGCGCACTTGGCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTPAPGH*AHLAVR
Trigger: GCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGG...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp GAGCAGTGCTCACCTGAAGCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCTTGGGGAGGTGGCCATaGGAAACAAGCAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: EQCSPEAPSGACGVPPHSLGRWP*ETSKYW
Trigger: CCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAA...GCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGCTTCAGGTGAGCACTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 90 bp CCAACTCAGCCCAGGCCCCTCCAACAATGCAAATCCCATGGCCGATaGCTCAATGGCTTCCCAGCTTCCAGGAGCAGGTCACAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: PTQPRPLQQCKSHGR*LNGFPASRSRSQCP
Trigger: TGGGCACTGTGACCTGCTCCTGGAAGCTGGGAAGCCATTGAGTCATCGGCCATGGGATTTGCATTGTTGGAGGGGCCTGGGCTGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496559.6
CDS GCA 90 bp GGAACTGTCTCCAAACCCAACAGGACCTTGGGGGCCAAGGCTCCCTaGAGGGACCTAGCTGCTACTCCTGGAGCCCCTGCTAATCCAAAT +
Preference number: 5 (lower is better)
Translates to: GTVSKPNRTLGAKAP*RDLAATPGAPANPN
Trigger: ATTTGGATTAGCAGGGGCTCCAGGAGTAGCAGCTAGGTCCCTGCAGGGAGCCTTGGCCCCCAAGGTCCTGTTGGGTTTGGAGACAGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491821.1
CDS CCA 90 bp TTGAACCAGGTGATGCGGGGCGGAGGGTTCCCCGTGGCTTTGCATTaGAGGGCCACTGTTTCTCCCACAGATACCACACGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LNQVMRGGGFPVALH*RATVSPTDTTRSSK
Trigger: CTTGGAAGACCGTGTGGTATCTGTGGGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGGGAACCCTCCGCCCCGCATCACCTGGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp CGCTTTCCACGGCTCTTTGTGATACGCAGACCCAGCACAGAGCTTTaGCTGCCTGCAGGCAACGCTGTGAGTGTCGGGCTCTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: RFPRLFVIRRPSTEL*LPAGNAVSVGLWKV
Trigger: CACTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGGGTCTGCGTATCACAAAGAGCCGTGGAAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp CCATTGGCTTTTTCTTCACAGCCGTCAGCATTCTATCGTGGTTACTaGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: PLAFSSQPSAFYRGY*GRATLGTRGRTQRQ
Trigger: CTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCTGACGGCTGTGAAGAAAAAGCCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp TCTGTTTCCCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGGGACTaGCGTCACATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: SVSRGAVLSVAWTRD*RHMLWGGGHWKQAS
Trigger: ACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCCGGGAAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAACCGGCCGCGCCATCTaGTCTGGAGCGCGCTGCGAA +
Preference number: 5 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTTGRAI*SGARCE
Trigger: TTCGCAGCGCGCTCCAGACAAGATGGCGCGGCCGGT...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGTTGGTGATGACACATaGGTAGCGGCCCTCGTGCCC +
Preference number: 5 (lower is better)
Translates to: LQVWMALAPLALQTGKPVVGDDT*VAALVP
Trigger: GGGCACGAGGGCCGCTACCAATGTGTCATCACCAAC...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 90 bp CATTGCTCTCAATGTGCCCATTGGCCTGAGGGCCACCCTCGGTCCTaGCCACGGTTTCTTGTCGGTCAGAAAGGGTCCCCTGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: HCSQCAHWPEGHPRS*PRFLVGQKGSPEKR
Trigger: TCTCTTCTCAGGGGACCCTTTCTGACCGACAAGAAACCGTGGTCAGGACCGAGGGTGGCCCTCAGGCCAATGGGCACATTGAGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 90 bp TACGCAGACCCAGCACAGAGCTTTGGCTGCCTGCAGGCAACGCTGTaGGTGTCGGGCTCTGGAAAGTGGCTTGCATCTCTTGGACACACA +
Preference number: 5 (lower is better)
Translates to: YADPAQSFGCLQATL*VSGSGKWLASLGHT
Trigger: TGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGGGTCTGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 90 bp AGGCTTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTaGATACGACCCGGCCACCGTGTTCCATCTTATGTGGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RLVPWSNSPLRCCSH*IRPGHRVPSYVAQV
Trigger: CACCTGGGCCACATAAGATGGAACACGGTGGCCGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 90 bp GGGGGTGGAAGGCTTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTaGAGTCACTGCATACGACCCGGCCACCGTGTTCCATCTTATGTG +
Preference number: 5 (lower is better)
Translates to: GGGRLVPWSNSPLRC*SHCIRPGHRVPSYV
Trigger: CACATAAGATGGAACACGGTGGCCGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GCCTGCAGCATCCTGCCAATTAGCCACGGGGGCAGCCACTTCAGCTaGCAGTCACACAGGAAGCTGTCGCTGCTGATATGGAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ACSILPISHGGSHFS*QSHRKLSLLIWSSL
Trigger: TAAAGAGCTCCATATCAGCAGCGACAGCTTCCTGTGTGACTGCCAGCTGAAGTGGCTGCCCCCGTGGCTAATTGGCAGGATGCTGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GCACATTCGAGGCGGGCCATGGTGGTGGTCCGGATGGTTATGTCGTaGGGCGTTTTGGTGAATGATGGCAACACATTCACGGTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: AHSRRAMVVVRMVMS*GVLVNDGNTFTVSL
Trigger: CAGGCTCACCGTGAATGTGTTGCCATCATTCACCAAAACGCCCCACGACATAACCATCCGGACCACCACCATGGCCCGCCTCGAATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATGGGTGATCCTGTTTTaGCTCAGGCGAAGAGTTAGC +
Preference number: 5 (lower is better)
Translates to: APSGACGVPPHSSLGVYEWVILF*LRRRVS
Trigger: GCTAACTCTTCGCCTGAGCAAAAACAGGATCACCCA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp GCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCTCCAGCCGTGTCAGGTaGTTGAAGGACAGGACCAAC +
Preference number: 5 (lower is better)
Translates to: ASVDGTCTPGSTDREACCSSRVR*LKDRTN
Trigger: GTTGGTCCTGTCCTTCAACAACCTGACACGGCTGGA...GCAACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACTTGGACACACACCATaGCTCTCAATGTGCCCATTG +
Preference number: 5 (lower is better)
Translates to: APSGACGVPPHSSLGVYELGHTP*LSMCPL
Trigger: CAATGGGCACATTGAGAGCAATGGTGTGTGTCCAAG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTCTGGGGGTGGAAGGCTaGTCCCCTGGAGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: QSQLSFICAKEWHGQACSLGVEG*SPGVTV
Trigger: GACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAG...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 90 bp GCATCTCTTGGACACACACCATTGCTCTCAATGTGCCCATTGGCCTaGGGGCCACCCTCGGTCCTGACCACGGTTTCTTGTCGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: ASLGHTPLLSMCPLA*GPPSVLTTVSCRSE
Trigger: TTCTGACCGACAAGAAACCGTGGTCAGGACCGAGGGTGGCCCTCAGGCCAATGGGCACATTGAGAGCAATGGTGTGTGTCCAAGAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp CAGAGAAAATGCTCTGACCCTTCAGTGATTCTGGGTGGGCACAGGTaGCTGTCACAAAGGCCTGCAGCATCCTGCCAATTAGCCACGGGG +
Preference number: 5 (lower is better)
Translates to: QRKCSDPSVILGGHR*LSQRPAASCQLATG
Trigger: CCCCGTGGCTAATTGGCAGGATGCTGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAGAATCACTGAAGGGTCAGAGCATTTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACCACCAGGAGCTGGTaGTCAGGGGTCAAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDTTRSW*SGVKWC
Trigger: GCACCACTTGACCCCTGACAACCAGCTCCTGGTGGT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACCGGCTCCGGGCCATTaGGCGCACTTGGCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: SKSCERLILHMGVTTMYRPAPGH*AHLAVR
Trigger: GCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACATCTAGAGATGCCATaGGCTTTTTCTTCACAGCCG +
Preference number: 5 (lower is better)
Translates to: APSGACGVPPHSSLGVYEHLEMP*AFSSQP
Trigger: CGGCTGTGAAGAAAAAGCCAATGGCATCTCTAGATG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 90 bp GGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTaGCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCG +
Preference number: 5 (lower is better)
Translates to: GHWKQASTGLPRALD*LKLMKMQAVALWSP
Trigger: CGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAACGCACTTCCGTGATGTaGTTCAAACTCAGATCTAAC +
Preference number: 5 (lower is better)
Translates to: APSGACGVPPHSSLGVYERTSVM*FKLRSN
Trigger: GTTAGATCTGAGTTTGAACAACATCACGGAAGTGCG...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTATGTGGCTGATGGAATaGTGGCTGAGACGCAGGACA +
Preference number: 5 (lower is better)
Translates to: LQVWMALAPLALQTGKPVMWLME*WLRRRT
Trigger: TGTCCTGCGTCTCAGCCACAATTCCATCAGCCACAT...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp GCTCCTTCCGGCGCATGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAATTGGTCAGGACTTCATaGTCTTTCTTCCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: APSGACGVPPHSSLGVYELVRTS*SFFQAK
Trigger: CTTTGCCTGGAAGAAAGACAATGAAGTCCTGACCAA...TTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACATGCGCCGGAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGCCCCGTGGCTTTGCATaGGAGGGCCACTGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKPRGFA*EGHCFS
Trigger: GGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGGG...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCCCCCGTGGCTTTGCATaGGAGGGCCACTGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSPRGFA*EGHCFS
Trigger: GGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGGG...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCGGGTTCCCCGTGGCTTaGCATTGGAGGGCCACTGTT +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSGFPVA*HWRATV
Trigger: AACAGTGGCCCTCCAATGCAAAGCCACGGGGAACCC...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCACCACCAGGAGCTGGTaGTCAGGGGTCAAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSTTRSW*SGVKWC
Trigger: GCACCACTTGACCCCTGACAACCAGCTCCTGGTGGT...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCTCTGGAAAGTGGCTaGCATCTCTTGGACACACAC +
Preference number: 5 (lower is better)
Translates to: LQVWMALAPLALQTGKPVALESG*HLLDTH
Trigger: GTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAGC...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTAAGTGTGGATGGCACTaGCACCCCTGGCTCTACAGA +
Preference number: 5 (lower is better)
Translates to: QSQLSFICAKEWHGQACSKCGWH*HPWLYR
Trigger: TCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTT...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 90 bp GATCTTGTTTCCAAACAGAGTCAGCTTGCTGAGGCTGTCGAGCCCTaGGAAGGCGCCGCTCGTGTCCTCTATTGTGCCCGAAATCTCGTT +
Preference number: 5 (lower is better)
Translates to: DLVSKQSQLAEAVEP*EGAARVLYCARNLV
Trigger: AACGAGATTTCGGGCACAATAGAGGACACGAGCGGCGCCTTCTCAGGGCTCGACAGCCTCAGCAAGCTGACTCTGTTTGGAAACAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000496559.6
CDS TCA 90 bp CACGAAACTCTCTGGTGGCACAGAGAAAATGCTCTGACCCTTCAGTaGTTCTGGGTGGGCACAGGTGGCTGTCACAAAGGCCTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HETLWWHRENALTLQ*FWVGTGGCHKGLQH
Trigger: ATGCTGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAGAATCACTGAAGGGTCAGAGCATTTTCTCTGTGCCACCAGAGAGTTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 90 bp TCTCCTCTATCATCGAGCTCCACTAGGGCTTTCCAAATATTTACTTaGCACTCGCACTCTGCTGAGCTCCCCGTCACTGGGGACGGGCTG +
Preference number: 5 (lower is better)
Translates to: SPLSSSSTRAFQIFT*HSHSAELPVTGDGL
Trigger: CAGCCCGTCCCCAGTGACGGGGAGCTCAGCAGAGTGCGAGTGTCAAGTAAATATTTGGAAAGCCCTAGTGGAGCTCGATGATAGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495037.1
CDS CCA 90 bp ACAGAGCTTTGGCTGCCTGCAGGCAACGCTGTGAGTGTCGGGCTCTaGAAAGTGGCTTGCATCTCTTGGACACACACCATTGCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: TELWLPAGNAVSVGL*KVACISWTHTIALN
Trigger: ATTGAGAGCAATGGTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GCGTCACATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAGTACTaGGCTTCCGCGCGCTCTGGACTGCCTGAAGTTAATGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: ASHALGRWPLETSKY*ASARSGLPEVNEDA
Trigger: TGCATCTTCATTAACTTCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACTCCAGCCGTGTCAGGTaGTTGAAGGACAGGACCAAC +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDSSRVR*LKDRTN
Trigger: GTTGGTCCTGTCCTTCAACAACCTGACACGGCTGGA...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCCCAAACAGAGTCAGCTaGCTGAGGCTGTCGAGCCCT +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSPNRVS*LRLSSP
Trigger: AGGGCTCGACAGCCTCAGCAAGCTGACTCTGTTTGG...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273261.8
CDS-3UTR CAA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGAGACAGGGAAGCCTGTaGCAGGGGCATCCACACATG +
Preference number: 5 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKRQGSL*QGHPHM
Trigger: CATGTGTGGATGCCCCTGCAACAGGCTTCCCTGTCT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAAGTGTGGATGGCACTaGCACCCCTGGCTCTACAGA +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDKCGWH*HPWLYR
Trigger: TCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 90 bp TTCACTCTTCTTCCTGGTCTGGTAGATGATGCACACCCAGACCAGTaGCGTCAGGACGATGCTGCTCACGACAGCAATGGTGAAGATGCC +
Preference number: 5 (lower is better)
Translates to: FTLLPGLVDDAHPDQ*RQDDAAHDSNGEDA
Trigger: GGCATCTTCACCATTGCTGTCGTGAGCAGCATCGTCCTGACGTCACTGGTCTGGGTGTGCATCATCTACCAGACCAGGAAGAAGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTaGGTGATGATCTGTGGCTTCAGGAAGTCATCGCACACGAAACTC +
Preference number: 5 (lower is better)
Translates to: VNRMSLPTIAMVVSG*VMICGFRKSSHTKL
Trigger: GAGTTTCGTGTGCGATGACTTCCTGAAGCCACAGATCATCACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTaGCTGGGTGATGATCTGTGGCTTCAGGAAGTCATCGCACACGAA +
Preference number: 5 (lower is better)
Translates to: ACKPDVLAHHSHGGF*LGDDLWLQEVIAHE
Trigger: TTCGTGTGCGATGACTTCCTGAAGCCACAGATCATCACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 90 bp AAGTCATCGCACACGAAACTCTCTGGTGGCACAGAGAAAATGCTCTaGCCCTTCAGTGATTCTGGGTGGGCACAGGTGGCTGTCACAAAG +
Preference number: 5 (lower is better)
Translates to: KSSHTKLSGGTEKML*PFSDSGWAQVAVTK
Trigger: CTTTGTGACAGCCACCTGTGCCCACCCAGAATCACTGAAGGGTCAGAGCATTTTCTCTGTGCCACCAGAGAGTTTCGTGTGCGATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 90 bp AATCCGATTGCCTGCCAGGTTGAGCTCCTTTATAGGCGGTCCGTGTaGAAAGCAGGTGTTCCGCACTTCCGTGATGTTGTTCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: NPIACQVELLYRRSV*KAGVPHFRDVVQTQ
Trigger: CTGAGTTTGAACAACATCACGGAAGTGCGGAACACCTGCTTTCCACACGGACCGCCTATAAAGGAGCTCAACCTGGCAGGCAATCGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000475366.5
ENST00000497721.5
ENST00000498287.5
CDS CCA 90 bp TCCAGTTGTGTCAGCCTGGGTAGCTTGAATGCTCTTACAGGAAGCTaGGTGATCCTGTTTTTGCTCAGGCGAAGAGTTAGCAGCGACCGT +
Preference number: 5 (lower is better)
Translates to: SSCVSLGSLNALTGS*VILFLLRRRVSSDR
Trigger: ACGGTCGCTGCTAACTCTTCGCCTGAGCAAAAACAGGATCACCCAGCTTCCTGTAAGAGCATTCAAGCTACCCAGGCTGACACAACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
ENST00000498287.5
CDS CCA 90 bp GGTTTCTTGTCGGTCAGAAAGGGTCCCCTGAGAAGAGAGGTAGCTTaGAACATCTGGTGGCACGACGGTTTCATCTGTGTTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: GFLSVRKGPLRREVA*NIWWHDGFICVGDT
Trigger: AGTGTCACCAACACAGATGAAACCGTCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCTCAGGGGACCCTTTCTGACCGACAAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGGTCAGCCTGGGTAGCTaGAATGCTCTTACAGGAAGC +
Preference number: 5 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKVSLGS*NALTGS
Trigger: GCTTCCTGTAAGAGCATTCAAGCTACCCAGGCTGAC...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACGAATCCTGTTCCGATaGAGGTCCAGTTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTRILFR*RSSCVS
Trigger: GCTGACACAACTGGACCTCAATCGGAACAGGATTCG...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACCGCTCGTGTCCTCTATaGTGCCCGAAATCTCGTTAT +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDRSCPL*CPKSRY
Trigger: ATAACGAGATTTCGGGCACAATAGAGGACACGAGCG...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAGAGAAGAGAGGTAGCTaGGAACATCTGGTGGCACGA +
Preference number: 5 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTEKRGS*EHLVAR
Trigger: TCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCTC...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACATTGGGGAGGTGGCCATaGGAAACAAGCAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTLGRWP*ETSKYW
Trigger: CCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAA...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CTGCAAGTGTGGATGGCACTTGCACCCCTGGCTCTACAGACAGGGAAGCCTGTTGCCACAGACTTGATCTaGTTTCCAAACAGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LQVWMALAPLALQTGKPVATDLI*FPNRVL
Trigger: AAGGACTCTGTTTGGAAACAAGATCAAGTCTGTGGC...AACAGGCTTCCCTGTCTGTAGAGCCAGGGGTGCAAGTGCCATCCACACTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS CCA 90 bp GCTCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTaGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGGAAGAATCCC +
Preference number: 5 (lower is better)
Translates to: ALDCLKLMKMQAVAL*SPGDTTLLKSRKNP
Trigger: GGGATTCTTCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCACGCTGCGAATCTTGTaGTGCTGCAGAAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSTLRIL*CCRKRE
Trigger: CTCTCTCTTTCTGCAGCACAACAAGATTCGCAGCGT...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCTGGGTGATCCTGTTTTaGCTCAGGCGAAGAGTTAGC +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSWVILF*LRRRVS
Trigger: GCTAACTCTTCGCCTGAGCAAAAACAGGATCACCCA...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATACGAATCCTGTTCCGATaGAGGTCCAGTTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIRILFR*RSSCVS
Trigger: GCTGACACAACTGGACCTCAATCGGAACAGGATTCG...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCCGCTCGTGTCCTCTATaGTGCCCGAAATCTCGTTAT +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSRSCPL*CPKSRY
Trigger: ATAACGAGATTTCGGGCACAATAGAGGACACGAGCG...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACGCCACAGACTTGATCTaGTTTCCAAACAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDATDLI*FPNRVS
Trigger: GCTGACTCTGTTTGGAAACAAGATCAAGTCTGTGGC...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273261.8
CDS-3UTR CAA 90 bp CAGTCCCAGCTCAGTTTCATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTTTCTCCATGTCTGCATaGGTCAGGACTTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: QSQLSFICAKEWHGQACSFSMSA*VRTSLS
Trigger: AGACAATGAAGTCCTGACCAATGCAGACATGGAGAA...AGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGATGAAACTGAGCTGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGATGTCGTGGGGCGTTTaGGTGAATGATGGCAACACA +
Preference number: 5 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKMSWGV*VNDGNT
Trigger: TGTGTTGCCATCATTCACCAAAACGCCCCACGACAT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAGCTCTGGAAAGTGGCTaGCATCTCTTGGACACACAC +
Preference number: 5 (lower is better)
Translates to: ICAKEWHGQACSGSLVEIALESG*HLLDTH
Trigger: GTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAGC...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGGGGTAGAGCGACCCTaGGCACTCGGGGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: LYIKVILPLSHCLSEAANGVERP*ALGAGP
Trigger: GGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACCCGGGTGATACAACCTaGCTAAAGTCCAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDPGDTT*LKSRKN
Trigger: ATTCTTCCTGGACTTTAGCAAGGTTGTATCACCCGG...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCTCTAATAAAAGGAGCTaGCTGAGGCTGTCGAGCCCT +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSSNKRS*LRLSSP
Trigger: AGGGCTCGACAGCCTCAGCAAGCTCCTTTTATTAGA...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS-3UTR CAA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCAGGCAATCTGAGGGTTaGGGTGACCTGTGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFRQSEG*GDLWQH
Trigger: GTGCTGCCACAGGTCACCCAAACCCTCAGATTGCCT...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACGGTTTCATCTGTGTaGGTGACACTGTACTCTTCA +
Preference number: 5 (lower is better)
Translates to: PSFLAASPTSLSRRDWYDTVSSV*VTLYSS
Trigger: TGAAGAGTACAGTGTCACCAACACAGATGAAACCGT...GTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACAGTCCACTTCGGTGTaGCAGTCACTGCATACGACC +
Preference number: 5 (lower is better)
Translates to: SKSCERLILHMGVTTMYRQSTSV*QSLHTT
Trigger: GGTCGTATGCAGTGACTGCAACACCGAAGTGGACTG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CCCTCATTCTACGCCTTACAGACGGACAGATTCTACGCCTTACAGACAGACAGGACAAAACCTAGCTTTTaGGTGCCAACAGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: PSFYALQTDRFYALQTDRTKPSF*VPTAVA
Trigger: TGCCACTGCTGTTGGCACCAAAAAGCTAGGTTTTGT...CCTGTCTGTCTGTAAGGCGTAGAATCTGTCCGTCTGTAAGGCGTAGAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TGTGGAGTCCCACCGCACAGCAGCCTAGGGGTCTATGAAGTGCAATATAAATCCACTCCCTCTTTCACATaGCCTCTCAGAAGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: CGVPPHSSLGVYEVQYKSTPSFT*PLRSSK
Trigger: TTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGT...GGATTTATATTGCACTTCATAGACCCCTAGGCTGCTGTGCGGTGGGACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 90 bp GCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAAGAACTaGGGTAGACAAAACCTAGCTTTTTGGTGCCAACAGCAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: ASPTSLSRRDWYDKN*GRQNLAFWCQQQWH
Trigger: GTGCCACTGCTGTTGGCACCAAAAAGCTAGGTTTTGTCTACCTCAGTTCTTGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000496559.6
CDS-3UTR CAA 90 bp CAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACACGCACTTCCGTGATGTaGTTCAAACTCAGATCTAAC +
Preference number: 5 (lower is better)
Translates to: QASSQPLLPLFPVEIGMTRTSVM*FKLRSN
Trigger: GTTAGATCTGAGTTTGAACAACATCACGGAAGTGCG...TGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATAAGACGGTTTCATCTGTGTaGGTGACACTGTACTCTTCA +
Preference number: 5 (lower is better)
Translates to: LCEGMAWTGLLWVLSRNKTVSSV*VTLYSS
Trigger: TGAAGAGTACAGTGTCACCAACACAGATGAAACCGT...CTTATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAGAGAAGAGAGGTAGCTaGGAACATCTGGTGGCACGA +
Preference number: 5 (lower is better)
Translates to: SKSCERLILHMGVTTMYREKRGS*EHLVAR
Trigger: TCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCTC...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAACGCTGCGAATCTTGTaGTGCTGCAGAAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SKSCERLILHMGVTTMYRTLRIL*CCRKRE
Trigger: CTCTCTCTTTCTGCAGCACAACAAGATTCGCAGCGT...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCATGTGGCTGATGGAATaGTGGCTGAGACGCAGGACA +
Preference number: 5 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFMWLME*WLRRRT
Trigger: TGTCCTGCGTCTCAGCCACAATTCCATCAGCCACAT...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTACTGGGGGTGGAAGGCTaGTCCCCTGGAGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLLGVEG*SPGVTV
Trigger: GACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAG...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGGCCATTTGGCGCACTaGGCTGTGCGCTGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LYIKVILPLSHCLSEAANGHLAH*AVRCLW
Trigger: CCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCTCCACGCTGCGAATCTaGTTGTGCTGCAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFSTLRI*LCCRKR
Trigger: TCTCTTTCTGCAGCACAACAAGATTCGCAGCGTGGA...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ATCTGTGCGAAGGAATGGCATGGACAGGCCTGCTCTGGGTCCTTAGTAGAAATACTCTTAGCCACAGACTaGATCTTGTTTCCAAACAGA +
Preference number: 5 (lower is better)
Translates to: ICAKEWHGQACSGSLVEILLATD*ILFPNR
Trigger: TCTGTTTGGAAACAAGATCAAGTCTGTGGCTAAGAG...TATTTCTACTAAGGACCCAGAGCAGGCCTGTCCATGCCATTCCTTCGCACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTACCTGACCACGGTTTCTaGTCGGTCAGAAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLPDHGF*SVRKGP
Trigger: GGGACCCTTTCTGACCGACAAGAAACCGTGGTCAGG...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCCTTGGACACACACCATaGCTCTCAATGTGCCCATTG +
Preference number: 5 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFLGHTP*LSMCPL
Trigger: CAATGGGCACATTGAGAGCAATGGTGTGTGTCCAAG...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGACCGGGTGATACAACCTaGCTAAAGTCCAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SKSCERLILHMGVTTMYRPGDTT*LKSRKN
Trigger: ATTCTTCCTGGACTTTAGCAAGGTTGTATCACCCGG...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGAACTCCCTCTTTCACATaGCCTCTCAGAAGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SKSCERLILHMGVTTMYRTPSFT*PLRSSK
Trigger: TTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGT...TCTGTACATAGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CCA 90 bp ATATGGAGCTCTTTAAGATTCTTCATCTTCACAAAGGCATCAAACTaGACAGATCTGATCGCATTCCCTCCAAGGTTCAGGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IWSSLRFFIFTKASN*TDLIAFPPRFRCSR
Trigger: CCTGGAGCACCTGAACCTTGGAGGGAATGCGATCAGATCTGTCCAGTTTGATGCCTTTGTGAAGATGAAGAATCTTAAAGAGCTCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS-3UTR CAA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGAGGGTGCCAATCCGATaGCCTGCCAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILRVPIR*PARLSS
Trigger: GGAGCTCAACCTGGCAGGCAATCGGATTGGCACCCT...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGGTTGGTGATGACACATaGGTAGCGGCCCTCGTGCCC +
Preference number: 5 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILVGDDT*VAALVP
Trigger: GGGCACGAGGGCCGCTACCAATGTGTCATCACCAAC...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp CACCCCGCACCAAAAACTCCTGTGAACAAATGTGGTTGTAGCCTCTATAAATTCCATCTAGAGATGCCATaGGCTTTTTCTTCACAGCCG +
Preference number: 5 (lower is better)
Translates to: HPAPKTPVNKCGCSLYKFHLEMP*AFSSQP
Trigger: CGGCTGTGAAGAAAAAGCCAATGGCATCTCTAGATG...GAATTTATAGAGGCTACAACCACATTTGTTCACAGGAGTTTTTGGTGCGGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGAGGCAATCTGAGGGTTaGGGTGACCTGTGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILRQSEG*GDLWQH
Trigger: GTGCTGCCACAGGTCACCCAAACCCTCAGATTGCCT...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGCCTGACCACGGTTTCTaGTCGGTCAGAAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILPDHGF*SVRKGP
Trigger: GGGACCCTTTCTGACCGACAAGAAACCGTGGTCAGG...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCACAGTCCACTTCGGTGTaGCAGTCACTGCATACGACC +
Preference number: 5 (lower is better)
Translates to: YIKVILPLSHCLSEAANSQSTSV*QSLHTT
Trigger: GGTCGTATGCAGTGACTGCAACACCGAAGTGGACTG...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGATGTGGAGAATGCTCTaGGTCACTCCCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILMWRML*VTPTRL
Trigger: GAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACAT...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTATCCACGCTGCGAATCTaGTTGTGCTGCAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLSTLRI*LCCRKR
Trigger: TCTCTTTCTGCAGCACAACAAGATTCGCAGCGTGGA...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATATGTCGTGGGGCGTTTaGGTGAATGATGGCAACACA +
Preference number: 5 (lower is better)
Translates to: LYIKVILPLSHCLSEAANMSWGV*VNDGNT
Trigger: TGTGTTGCCATCATTCACCAAAACGCCCCACGACAT...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp AAACGAAAACATCAGTATAGAAAAATCCACAGGTACCAACACCAGCAGCCTTTAACAAAACCTAGCTTTTaGGTGCCAACAGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: KRKHQYRKIHRYQHQQPLTKPSF*VPTAVA
Trigger: TGCCACTGCTGTTGGCACCAAAAAGCTAGGTTTTGT...TAAAGGCTGCTGGTGTTGGTACCTGTGGATTTTTCTATACTGATGTTTTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTTCTCCATGTCTGCATaGGTCAGGACTTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: LYIKVILPLSHCLSEAANFSMSA*VRTSLS
Trigger: AGACAATGAAGTCCTGACCAATGCAGACATGGAGAA...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATTCACTCTTAGCCACAGACTaGATCTTGTTTCCAAACAGA +
Preference number: 5 (lower is better)
Translates to: YIKVILPLSHCLSEAANSLLATD*ILFPNR
Trigger: TCTGTTTGGAAACAAGATCAAGTCTGTGGCTAAGAG...TGAATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGTTGGTCAGGACTTCATaGTCTTTCTTCCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILLVRTS*SFFQAK
Trigger: CTTTGCCTGGAAGAAAGACAATGAAGTCCTGACCAA...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp TTGTACATAAAAGTAATACTCCCTCTTTCACATTGCCTCTCAGAAGCAGCAAATGTCAACTCATTATTATaGAGGTACACTTCCTGTAGG +
Preference number: 5 (lower is better)
Translates to: LYIKVILPLSHCLSEAANVNSLL*RYTSCR
Trigger: CCTACAGGAAGTGTACCTCAATAATAATGAGTTGAC...ATTTGCTGCTTCTGAGAGGCAATGTGAAAGAGGGAGTATTACTTTTATGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS-3UTR CAA 90 bp ACCAGCAGCCTTTACCTTAATTTAAAAGTCTCAAATAGCAATCGAATGATACTGGTCAACTCATTATTATaGAGGTACACTTCCTGTAGG +
Preference number: 5 (lower is better)
Translates to: TSSLYLNLKVSNSNRMILVNSLL*RYTSCR
Trigger: CCTACAGGAAGTGTACCTCAATAATAATGAGTTGAC...CAGTATCATTCGATTGCTATTTGAGACTTTTAAATTAAGGTAAAGGCTGCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp AAGTTCTCTCTGCGGCCGCGGCTCCGGCACTCAGCGTaGCCCCGGTGCCCGGGCCGCTCCGGAGCACCCGGC +
Preference number: 6 (lower is better)
Translates to: KFSLRPRLRHSA*PRCPGRSGAPG
Trigger: GCCGGGTGCTCCGGAGCGGCCCGGGCACCGGGGGCACGCTGAGTGCCGGAGCCGCGGCCGCAGAGAGAACTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp CAGCCTGCGCTCTTCGTCCGCCCGGGGCACGCCGAGTaGCGCTACCGACACCGGCCGAGGGCAGTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: QPALFVRPGHAE*RYRHRPRAVLP
Trigger: CGGCAGCACTGCCCTCGGCCGGTGTCGGTAGCGGCACTCGGCGTGCCCCGGGCGGACGAAGAGCGCAGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp GCGCCCATCCGGGCCGGCCGGCCCGCCCGCGCTAGCTaGGAACTCCGCCGATTCGGGCAAGGTGTACCCAGC +
Preference number: 6 (lower is better)
Translates to: APIRAGRPARAS*ELRRFGQGVPS
Trigger: GCTGGGTACACCTTGCCCGAATCGGCGGAGTTCGCAGCTAGCGCGGGCGGGCCGGCCGGCCCGGATGGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp GCCGCTACCGACACCGGCCGAGGGCAGTGCTGCCGCTaGGCCTGGAAGACAGGCGTTCAGCCCCGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: AATDTGRGQCCR*AWKTGVQPRSP
Trigger: CGGGCTGCGGGGCTGAACGCCTGTCTTCCAGGCGCAGCGGCAGCACTGCCCTCGGCCGGTGTCGGTAGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp GCTCCGCGGCCGCCTGCTGGCCCACGTTGGATGCTTTaGAACAGCGCCCCGCCACGCCTCCCCGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: APRPPAGPRWML*NSAPPRLPACC
Trigger: GCAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAAAGCATCCAACGTGGGCCAGCAGGCGGCCGCGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS CAA 72 bp CGCTCCGCGGCCGCCTGCTGGCCCACGTTGGATGCTTaGCAACAGCGCCCCGCCACGCCTCCCCGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RSAAACWPTLDA*QQRPATPPRLL
Trigger: CAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAAAGCATCCAACGTGGGCCAGCAGGCGGCCGCGGAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS GCA 72 bp CGCCCCGCCACGCCTCCCCGCCTGCTGCTCATTGGCTaGCGGAGTCCACCGTGGCCAGCCTCGAGGGCCATT +
Preference number: 6 (lower is better)
Translates to: RPATPPRLLLIG*RSPPWPASRAI
Trigger: AATGGCCCTCGAGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGCGGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS CCA 72 bp ACCGACACCGGCCGAGGGCAGTGCTGCCGCTGCGCCTaGAAGACAGGCGTTCAGCCCCGCAGCCCGAGCTCG +
Preference number: 6 (lower is better)
Translates to: TDTGRGQCCRCA*KTGVQPRSPSS
Trigger: CGAGCTCGGGCTGCGGGGCTGAACGCCTGTCTTCCAGGCGCAGCGGCAGCACTGCCCTCGGCCGGTGTCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp GCGAACTCCGCCGATTCGGGCAAGGTGTACCCAGCCTaGGCTCTTCGTCCGCCCGGGGCACGCCGAGTGCCG +
Preference number: 6 (lower is better)
Translates to: ANSADSGKVYPA*ALRPPGARRVP
Trigger: CGGCACTCGGCGTGCCCCGGGCGGACGAAGAGCGCAGGCTGGGTACACCTTGCCCGAATCGGCGGAGTTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp CTTTGCAACAGCGCCCCGCCACGCCTCCCCGCCTGCTaGTCATTGGCTGCCGGAGTCCACCGTGGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LCNSAPPRLPAC*SLAAGVHRGQP
Trigger: AGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS CCA 72 bp CTGCCGGAGTCCACCGTGGCCAGCCTCGAGGGCCATTaGAGCGCTCGCTGTGATCCCGCCCCTCCCGCTTCA +
Preference number: 6 (lower is better)
Translates to: LPESTVASLEGH*SARCDPAPPAS
Trigger: TGAAGCGGGAGGGGCGGGATCACAGCGAGCGCTCCAATGGCCCTCGAGGCTGGCCACGGTGGACTCCGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS CCA 72 bp CCCCGCCTGCTGCTCATTGGCTGCCGGAGTCCACCGTaGCCAGCCTCGAGGGCCATTGGAGCGCTCGCTGTG +
Preference number: 6 (lower is better)
Translates to: PRLLLIGCRSPP*PASRAIGALAV
Trigger: CACAGCGAGCGCTCCAATGGCCCTCGAGGCTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS GCA 72 bp ATGCTTTGCAACAGCGCCCCGCCACGCCTCCCCGCCTaGTGCTCATTGGCTGCCGGAGTCCACCGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: MLCNSAPPRLPA*CSLAAGVHRGQ
Trigger: CTGGCCACGGTGGACTCCGGCAGCCAATGAGCAGCAGGCGGGGAGGCGTGGCGGGGCGCTGTTGCAAAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498287.5
CDS CAA 72 bp GGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTaGGCTGTGCGCTGTCTCTGGACACAGGCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GHSHPAPGHLAH*AVRCLWTQAGG
Trigger: ACCCCCAGCCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp CTGCAGCCTGCTGCGGGCAGGACGCTCAGCTGGCTGTaGGCTCGCTCCGTGCCCAGGGTGTTGGACATCTCA +
Preference number: 6 (lower is better)
Translates to: LQPAAGRTLSWL*ARSVPRVLDIS
Trigger: TGAGATGTCCAACACCCTGGGCACGGAGCGAGCTCACAGCCAGCTGAGCGTCCTGCCCGCAGCAGGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp GATGCCTACCGTGGTCCCATCCTTCCTGCAGCCTGCTaGGGGCAGGACGCTCAGCTGGCTGTGAGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: DAYRGPILPAAC*GQDAQLAVSSL
Trigger: GAGCGAGCTCACAGCCAGCTGAGCGTCCTGCCCGCAGCAGGCTGCAGGAAGGATGGGACCACGGTAGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp CCACCCTGGGCCTGGCTGGTTTGGGAACAGGGCTACTaGCCTGTCTCTGAGCCCTCCCCGAGGCCACTGTGT +
Preference number: 6 (lower is better)
Translates to: PPWAWLVWEQGY*PVSEPSPRPLC
Trigger: ACACAGTGGCCTCGGGGAGGGCTCAGAGACAGGCCAGTAGCCCTGTTCCCAAACCAGCCAGGCCCAGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491821.1
CDS TCA 72 bp TCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTaGTGTGGAGAATGCTCTTGGTCACTCCCACCCGGC +
Preference number: 6 (lower is better)
Translates to: SGQDPAAVLLHW*CGECSWSLPPG
Trigger: GCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp GAAGATGCCTACCGTGGTCCCATCCTTCCTGCAGCCTaGTGCGGGCAGGACGCTCAGCTGGCTGTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: EDAYRGPILPAA*CGQDAQLAVSS
Trigger: CGAGCTCACAGCCAGCTGAGCGTCCTGCCCGCAGCAGGCTGCAGGAAGGATGGGACCACGGTAGGCATCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp GCAGGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTaGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: AGPSGSPAALVM*RMLLVTPTRLR
Trigger: CCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp GGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTGGAGAATGCTCTaGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGGCTG +
Preference number: 6 (lower is better)
Translates to: GPSGSPAALVMWRML*VTPTRLRAIWRTWL
Trigger: CAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp GGGCACAGGTGGCTGTCACAAAGGCCTGCAGCATCCTaGCAATTAGCCACGGGGGCAGCCACTTCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GHRWLSQRPAAS*QLATGAATSAG
Trigger: GCCAGCTGAAGTGGCTGCCCCCGTGGCTAATTGGCAGGATGCTGCAGGCCTTTGTGACAGCCACCTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp ATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTaGCGCACTTGGCTGTGCGCTGTCTCTGGACACAGG +
Preference number: 6 (lower is better)
Translates to: MLLVTPTRLRAI*RTWLCAVSGHR
Trigger: CCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp CCCTCTGTTTCCCGGGGAGCTGTCCTGTCAGTGGCGTaGACTCGGGACTGGCGTCACATGCTTTGGGGAGGT +
Preference number: 6 (lower is better)
Translates to: PSVSRGAVLSVA*TRDWRHMLWGG
Trigger: ACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCCGGGAAACAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp TGGCACCCTCTGTTTCCCGGGGAGCTGTCCTGTCAGTaGCGTGGACTCGGGACTGGCGTCACATGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: WHPLFPGELSCQ*RGLGTGVTCFG
Trigger: CCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCCGGGAAACAGAGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp GGCAGTCCTGCTGCACTGGTGATGTGGAGAATGCTCTaGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGC +
Preference number: 6 (lower is better)
Translates to: GSPAALVMWRML*VTPTRLRAIWR
Trigger: GCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp AATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTaGGCTGTGCGCTGTCTCTGGACACAGGCTGGGGGTGGAAGGCTT +
Preference number: 6 (lower is better)
Translates to: NALGHSHPAPGHLAH*AVRCLWTQAGGGRL
Trigger: AAGCCTTCCACCCCCAGCCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp GATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTaGGCGCACTTGGCTGTGCGCTGTCTCTGGACACAGGCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: DVENALGHSHPAPGH*AHLAVRCLWTQAGG
Trigger: ACCCCCAGCCTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp CACAGCCGTCAGCATTCTATCGTGGTTACTGGGGTAGAGCGACCCTaGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTG +
Preference number: 6 (lower is better)
Translates to: HSRQHSIVVTGVERP*ALGAGPSGSPAALV
Trigger: CACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCTGACGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp GATTCTGGGTGGGCACAGGTGGCTGTCACAAAGGCCTaGAGCATCCTGCCAATTAGCCACGGGGGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: DSGWAQVAVTKA*SILPISHGGSH
Trigger: GTGGCTGCCCCCGTGGCTAATTGGCAGGATGCTGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp CTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTaGACTGGTGATGTGGAGAATGCTCTTGGTCACTCC +
Preference number: 6 (lower is better)
Translates to: LGTRGRTQRQSC*TGDVENALGHS
Trigger: GGAGTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp ACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTaGTGCACTGGTGATGTGGAGAATGCTCTTGGTCAC +
Preference number: 6 (lower is better)
Translates to: TLGTRGRTQRQS*CTGDVENALGH
Trigger: GTGACCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp GGTGACCTGTGGCAGCACATTCGAGGCGGGCCATGGTaGTGGTCCGGATGGTTATGTCGTGGGGCGTTTTGG +
Preference number: 6 (lower is better)
Translates to: GDLWQHIRGGPW*WSGWLCRGAFW
Trigger: CCAAAACGCCCCACGACATAACCATCCGGACCACCACCATGGCCCGCCTCGAATGTGCTGCCACAGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp CGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGGGACTaGCGTCACATGCTTTGGGGAGGTGGCCATTGGAAA +
Preference number: 6 (lower is better)
Translates to: RGAVLSVAWTRD*RHMLWGGGHWK
Trigger: TTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp GGTGATGCGGGGCGGAGGGTTCCCCGTGGCTTTGCATaGGAGGGCCACTGTTTCTCCCACAGATACCACACG +
Preference number: 6 (lower is better)
Translates to: GDAGRRVPRGFA*EGHCFSHRYHT
Trigger: CGTGTGGTATCTGTGGGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGGGAACCCTCCGCCCCGCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp AATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTaGGCGCACTTGGCTGTGCGCTGTCTCTGGACACAG +
Preference number: 6 (lower is better)
Translates to: NALGHSHPAPGH*AHLAVRCLWTQ
Trigger: CTGTGTCCAGAGACAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp CAGCATTCTATCGTGGTTACTGGGGTAGAGCGACCCTaGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: QHSIVVTGVERP*ALGAGPSGSPA
Trigger: AGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp CTCCTGAGTCCCTTGAAGGCACCCTCCGCAATGTGGCTGATGGAATaGTGGCTGAGACGCAGGACACTCAGGCTGCTCAGCTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LLSPLKAPSAMWLME*WLRRRTLRLLSSAR
Trigger: CCTGGCCGAGCTGAGCAGCCTGAGTGTCCTGCGTCTCAGCCACAATTCCATCAGCCACATTGCGGAGGGTGCCTTCAAGGGACTCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CAA 90 bp CTGGGGACGGGCTGGGGGAATCGAGCGGCAGCCGTCCTCTCTGTCTaGCCCTCCTCCAGTCTTCCCTCCGAGCTGCTAGTAAACAGTAAT +
Preference number: 6 (lower is better)
Translates to: LGTGWGNRAAAVLSV*PSSSLPSELLVNSN
Trigger: ATTACTGTTTACTAGCAGCTCGGAGGGAAGACTGGAGGAGGGCAAGACAGAGAGGACGGCTGCCGCTCGATTCCCCCAGCCCGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495037.1
CDS TCA 72 bp CAATGTGCCCATTGGCCTGAGGGCCACCCTCGGTCCTaGCCACGGTTTCTTGTCGGTCAGAAAGGGTCCCCT +
Preference number: 6 (lower is better)
Translates to: QCAHWPEGHPRS*PRFLVGQKGSP
Trigger: AGGGGACCCTTTCTGACCGACAAGAAACCGTGGTCAGGACCGAGGGTGGCCCTCAGGCCAATGGGCACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp GGCGCTGACTCTGAGCCAGGGAGGACATCTGGGTGCTaGGTCAGACTTGTGACCCACTCGCCAGGATCAGAG +
Preference number: 6 (lower is better)
Translates to: GADSEPGRTSGC*VRLVTHSPGSE
Trigger: CTCTGATCCTGGCGAGTGGGTCACAAGTCTGACTCAGCACCCAGATGTCCTCCCTGGCTCAGAGTCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496559.6
CDS CCA 72 bp TTGGGTGACCTGTGGCAGCACATTCGAGGCGGGCCATaGTGGTGGTCCGGATGGTTATGTCGTGGGGCGTTT +
Preference number: 6 (lower is better)
Translates to: LGDLWQHIRGGP*WWSGWLCRGAF
Trigger: AAACGCCCCACGACATAACCATCCGGACCACCACCATGGCCCGCCTCGAATGTGCTGCCACAGGTCACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp CGGCTCTTTGTGATACGCAGACCCAGCACAGAGCTTTaGCTGCCTGCAGGCAACGCTGTGAGTGTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: RLFVIRRPSTEL*LPAGNAVSVGL
Trigger: GAGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGGGTCTGCGTATCACAAAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp CGGGACTGGCGTCACATGCTTTGGGGAGGTGGCCATTaGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTG +
Preference number: 6 (lower is better)
Translates to: RDWRHMLWGGGH*KQASTGLPRAL
Trigger: CAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp AACCAGGTGATGCGGGGCGGAGGGTTCCCCGTGGCTTaGCATTGGAGGGCCACTGTTTCTCCCACAGATACC +
Preference number: 6 (lower is better)
Translates to: NQVMRGGGFPVA*HWRATVSPTDT
Trigger: GGTATCTGTGGGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGGGAACCCTCCGCCCCGCATCACCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp GGCCTGAGGGCCACCCTCGGTCCTGACCACGGTTTCTaGTCGGTCAGAAAGGGTCCCCTGAGAAGAGAGGTA +
Preference number: 6 (lower is better)
Translates to: GLRATLGPDHGF*SVRKGPLRREV
Trigger: TACCTCTCTTCTCAGGGGACCCTTTCTGACCGACAAGAAACCGTGGTCAGGACCGAGGGTGGCCCTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp TCTACCCCTGGAACTGTCTCCAAACCCAACAGGACCTaGGGGGCCAAGGCTCCCTGCAGGGACCTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: STPGTVSKPNRT*GAKAPCRDLAA
Trigger: AGCAGCTAGGTCCCTGCAGGGAGCCTTGGCCCCCAAGGTCCTGTTGGGTTTGGAGACAGTTCCAGGGGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491821.1
CDS CAA 90 bp GTGCCCATTGGCCTGAGGGCCACCCTCGGTCCTGACCACGGTTTCTaGTCGGTCAGAAAGGGTCCCCTGAGAAGAGAGGTAGCTTGGAAC +
Preference number: 6 (lower is better)
Translates to: VPIGLRATLGPDHGF*SVRKGPLRREVAWN
Trigger: GTTCCAAGCTACCTCTCTTCTCAGGGGACCCTTTCTGACCGACAAGAAACCGTGGTCAGGACCGAGGGTGGCCCTCAGGCCAATGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp AGCTGTCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATGCTTaGGGGAGGTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCG +
Preference number: 6 (lower is better)
Translates to: SCPVSGVDSGLASHA*GRWPLETSKYWASA
Trigger: CGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp TCCAAACAGAGTCAGCTTGCTGAGGCTGTCGAGCCCTaGGAAGGCGCCGCTCGTGTCCTCTATTGTGCCCGA +
Preference number: 6 (lower is better)
Translates to: SKQSQLAEAVEP*EGAARVLYCAR
Trigger: TCGGGCACAATAGAGGACACGAGCGGCGCCTTCTCAGGGCTCGACAGCCTCAGCAAGCTGACTCTGTTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000496559.6
CDS TCA 72 bp AGCCAGGGAGGACATCTGGGTGCTGAGTCAGACTTGTaGCCCACTCGCCAGGATCAGAGGGATGAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: SQGGHLGAESDL*PTRQDQRDEAN
Trigger: GTTGGCCTCATCCCTCTGATCCTGGCGAGTGGGTCACAAGTCTGACTCAGCACCCAGATGTCCTCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496559.6
CDS GCA 72 bp CGAGCCCTGAGAAGGCGCCGCTCGTGTCCTCTATTGTaGCCGAAATCTCGTTATGGTCCAGATCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: RALRRRRSCPLL*PKSRYGPDPSQ
Trigger: CTGGCTGGGATCTGGACCATAACGAGATTTCGGGCACAATAGAGGACACGAGCGGCGCCTTCTCAGGGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496559.6
CDS CAA 72 bp AGCTCGGCCAGGCTCTCCTCGTCCAGCCGTGTCAGGTaGTTGAAGGACAGGACCAACTCATGCAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SSARLSSSSRVR*LKDRTNSCSFW
Trigger: CCAGAAGCTGCATGAGTTGGTCCTGTCCTTCAACAACCTGACACGGCTGGACGAGGAGAGCCTGGCCGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CAA 72 bp CCCTTGAAGGCACCCTCCGCAATGTGGCTGATGGAATaGTGGCTGAGACGCAGGACACTCAGGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PLKAPSAMWLME*WLRRRTLRLLS
Trigger: GCTGAGCAGCCTGAGTGTCCTGCGTCTCAGCCACAATTCCATCAGCCACATTGCGGAGGGTGCCTTCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CAA 72 bp ACGGCTCTTTGTGATACGCAGACCCAGCACAGAGCTTaGGCTGCCTGCAGGCAACGCTGTGAGTGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: TALCDTQTQHRA*AACRQRCECRA
Trigger: AGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGGGTCTGCGTATCACAAAGAGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp TGCGCTGTCTCTGGACACAGGCTGGGGGTGGAAGGCTaGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: CAVSGHRLGVEG*SPGVTVHFGVA
Trigger: TGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCTGTGTCCAGAGACAGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp CTTGAACCAGGTGATGCGGGGCGGAGGGTTCCCCGTGGCTTTGCATaGGAGGGCCACTGTTTCTCCCACAGATACCACACGGTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: LEPGDAGRRVPRGFA*EGHCFSHRYHTVFQ
Trigger: TTGGAAGACCGTGTGGTATCTGTGGGAGAAACAGTGGCCCTCCAATGCAAAGCCACGGGGAACCCTCCGCCCCGCATCACCTGGTTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp ACTTGGCTGTGCGCTGTCTCTGGACACAGGCTGGGGGTGGAAGGCTaGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCA +
Preference number: 6 (lower is better)
Translates to: TWLCAVSGHRLGVEG*SPGVTVHFGVAVTA
Trigger: TGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCTGTGTCCAGAGACAGCGCACAGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp GGGGAGCTGCTGCTGCTGGCTGCTGAGCATGTAAACCGGATGTCCTaGCCCACCATAGCCATGGTGGTTTCTGGCTGGGTGATGATCTGT +
Preference number: 6 (lower is better)
Translates to: GELLLLAAEHVNRMS*PTIAMVVSGWVMIC
Trigger: ACAGATCATCACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCAGCCAGCAGCAGCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp TCGCTTTCCACGGCTCTTTGTGATACGCAGACCCAGCACAGAGCTTaGGCTGCCTGCAGGCAACGCTGTGAGTGTCGGGCTCTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: SLSTALCDTQTQHRA*AACRQRCECRALES
Trigger: ACTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGGGTCTGCGTATCACAAAGAGCCGTGGAAAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp GTGACGTCAGGACGATGCTGCTCACGACAGCAATGGTaGAGATGCCTACCGTGGTCCCATCCTTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: VTSGRCCSRQQW*RCLPWSHPSCS
Trigger: GCTGCAGGAAGGATGGGACCACGGTAGGCATCTTCACCATTGCTGTCGTGAGCAGCATCGTCCTGACGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp GGACACACACCATTGCTCTCAATGTGCCCATTGGCCTaGGGGCCACCCTCGGTCCTGACCACGGTTTCTTGT +
Preference number: 6 (lower is better)
Translates to: GHTPLLSMCPLA*GPPSVLTTVSC
Trigger: ACAAGAAACCGTGGTCAGGACCGAGGGTGGCCCTCAGGCCAATGGGCACATTGAGAGCAATGGTGTGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp CCAGCACAGAGCTTTGGCTGCCTGCAGGCAACGCTGTaGGTGTCGGGCTCTGGAAAGTGGCTTGCATCTCTT +
Preference number: 6 (lower is better)
Translates to: PAQSFGCLQATL*VSGSGKWLASL
Trigger: AAGAGATGCAAGCCACTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCAAAGCTCTGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp CCCAGGCCCCTCCAACAATGCAAATCCCATGGCCGATaGCTCAATGGCTTCCCAGCTTCCAGGAGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: PRPLQQCKSHGR*LNGFPASRSRS
Trigger: TGACCTGCTCCTGGAAGCTGGGAAGCCATTGAGTCATCGGCCATGGGATTTGCATTGTTGGAGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496559.6
CDS CCA 72 bp TTGAAGGCACCCTCCGCAATGTGGCTGATGGAATTGTaGCTGAGACGCAGGACACTCAGGCTGCTCAGCTCG +
Preference number: 6 (lower is better)
Translates to: LKAPSAMWLMEL*LRRRTLRLLSS
Trigger: CGAGCTGAGCAGCCTGAGTGTCCTGCGTCTCAGCCACAATTCCATCAGCCACATTGCGGAGGGTGCCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CCA 72 bp ATCCTGCCAATTAGCCACGGGGGCAGCCACTTCAGCTaGCAGTCACACAGGAAGCTGTCGCTGCTGATATGG +
Preference number: 6 (lower is better)
Translates to: ILPISHGGSHFS*QSHRKLSLLIW
Trigger: CCATATCAGCAGCGACAGCTTCCTGTGTGACTGCCAGCTGAAGTGGCTGCCCCCGTGGCTAATTGGCAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp TCAGTGGCGTGGACTCGGGACTGGCGTCACATGCTTTaGGGAGGTGGCCATTGGAAACAAGCAAGTACTGGG +
Preference number: 6 (lower is better)
Translates to: SVAWTRDWRHML*GGGHWKQASTG
Trigger: CCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp CTGCTGCTGGCTGCTGAGCATGTAAACCGGATGTCCTaGCCCACCATAGCCATGGTGGTTTCTGGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LLLAAEHVNRMS*PTIAMVVSGWV
Trigger: CACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCAGCCAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp TGTCGAGCCCTGAGAAGGCGCCGCTCGTGTCCTCTATaGTGCCCGAAATCTCGTTATGGTCCAGATCCCAGC +
Preference number: 6 (lower is better)
Translates to: CRALRRRRSCPL*CPKSRYGPDPS
Trigger: GCTGGGATCTGGACCATAACGAGATTTCGGGCACAATAGAGGACACGAGCGGCGCCTTCTCAGGGCTCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496559.6
CDS TCA 72 bp TCATGCAGCTTCTGGCAGAAGCTCCAGCCCTTGCGGTaGATGCGAGCGATGGAATTGTTGCTGAGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: SCSFWQKLQPLR*MRAMELLLRWS
Trigger: GCTCCACCTCAGCAACAATTCCATCGCTCGCATTCACCGCAAGGGCTGGAGCTTCTGCCAGAAGCTGCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000491821.1
CDS GCA 72 bp CGAGCCCTGAGAAGGCGCCGCTCGTGTCCTCTATTGTaGCCGAAATCTCGTTATGGTCCAGATCCAAGACTC +
Preference number: 6 (lower is better)
Translates to: RALRRRRSCPLL*PKSRYGPDPRL
Trigger: GAGTCTTGGATCTGGACCATAACGAGATTTCGGGCACAATAGAGGACACGAGCGGCGCCTTCTCAGGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS GCA 72 bp TCAGTGATGAAAAACACGTCGTCATCCGGCATGACATaGATGCGTCGCTCACGGGCAGCGGGGAAATCCGTG +
Preference number: 6 (lower is better)
Translates to: SVMKNTSSSGMT*MRRSRAAGKSV
Trigger: CACGGATTTCCCCGCTGCCCGTGAGCGACGCATGCATGTCATGCCGGATGACGACGTGTTTTTCATCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273261.8
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp GTTGGACATCTCACAGGTATATCGGCCCGCATCCTCTaGCACCACGTTCTGAACCACCAGGAGCTGGTTGTC +
Preference number: 6 (lower is better)
Translates to: VGHLTGISARIL*HHVLNHQELVV
Trigger: GACAACCAGCTCCTGGTGGTTCAGAACGTGGTGGCAGAGGATGCGGGCCGATATACCTGTGAGATGTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp TCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATaGTTTGGGGAGGTGGCCATTGGAAACAAGCAAGTA +
Preference number: 6 (lower is better)
Translates to: SCQWRGLGTGVT*FGEVAIGNKQV
Trigger: TACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp AGGAAAGGTAGGCCTTCAGCTGGCTCCCCTCCACGCTaGGAATCTTGTTGTGCTGCCATAAAGGATGTGCCC +
Preference number: 6 (lower is better)
Translates to: RKGRPSAGSPPR*ESCCAAIKDVP
Trigger: GGGCACATCCTTTATGGCAGCACAACAAGATTCGCAGCGTGGAGGGGAGCCAGCTGAAGGCCTACCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497721.5
CDS CCA 72 bp AGGCGGGCCATGGTGGTGGTCCGGATGGTTATGTCGTaGGGCGTTTTGGTGAATGATGGCAACACATTCACG +
Preference number: 6 (lower is better)
Translates to: RRAMVVVRMVMS*GVLVNDGNTFT
Trigger: CGTGAATGTGTTGCCATCATTCACCAAAACGCCCCACGACATAACCATCCGGACCACCACCATGGCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp TGGCTGCCTGCAGGCAACGCTGTGAGTGTCGGGCTCTaGAAAGTGGCTTGCATCTCTTGGACACACACCATT +
Preference number: 6 (lower is better)
Translates to: WLPAGNAVSVGL*KVACISWTHTI
Trigger: AATGGTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAGCCCGACACTCACAGCGTTGCCTGCAGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp TTTTCTTCACAGCCGTCAGCATTCTATCGTGGTTACTaGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACC +
Preference number: 6 (lower is better)
Translates to: FSSQPSAFYRGY*GRATLGTRGRT
Trigger: GGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCTGACGGCTGTGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp AACTCAGCCCAGGCCCCTCCAACAATGCAAATCCCATaGCCGATGACTCAATGGCTTCCCAGCTTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: NSAQAPPTMQIP*PMTQWLPSFQE
Trigger: CTCCTGGAAGCTGGGAAGCCATTGAGTCATCGGCCATGGGATTTGCATTGTTGGAGGGGCCTGGGCTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496559.6
CDS CAA 72 bp CCATCAAATGCTCCCAACTCCAGGGTGCCAATCCGATaGCCTGCCAGGTTGAGCTCCTTTATAGGCGGTCCG +
Preference number: 6 (lower is better)
Translates to: PSNAPNSRVPIR*PARLSSFIGGP
Trigger: CGGACCGCCTATAAAGGAGCTCAACCTGGCAGGCAATCGGATTGGCACCCTGGAGTTGGGAGCATTTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000475366.5
ENST00000497721.5
ENST00000498287.5
CDS CAA 72 bp TGGTCCAGATCCAAGACTCGCAGGCTCCTGAGTCCCTaGAAGGCACCCTCCGCAATGTGGCTGATGGAATTG +
Preference number: 6 (lower is better)
Translates to: WSRSKTRRLLSP*KAPSAMWLMEL
Trigger: CAATTCCATCAGCCACATTGCGGAGGGTGCCTTCAAGGGACTCAGGAGCCTGCGAGTCTTGGATCTGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 72 bp CTCTGGTGGCACAGAGAAAATGCTCTGACCCTTCAGTaGTTCTGGGTGGGCACAGGTGGCTGTCACAAAGGC +
Preference number: 6 (lower is better)
Translates to: LWWHRENALTLQ*FWVGTGGCHKG
Trigger: GCCTTTGTGACAGCCACCTGTGCCCACCCAGAATCACTGAAGGGTCAGAGCATTTTCTCTGTGCCACCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp CTTCCTGGTCTGGTAGATGATGCACACCCAGACCAGTaGCGTCAGGACGATGCTGCTCACGACAGCAATGGT +
Preference number: 6 (lower is better)
Translates to: LPGLVDDAHPDQ*RQDDAAHDSNG
Trigger: ACCATTGCTGTCGTGAGCAGCATCGTCCTGACGTCACTGGTCTGGGTGTGCATCATCTACCAGACCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp AGGAAAGGTAGGCCTTCAGCTGGCTCCCCTCCACGCTaGGAATCTTGTTGTGCTGCAGAAAGAGAGAGACGA +
Preference number: 6 (lower is better)
Translates to: RKGRPSAGSPPR*ESCCAAERERR
Trigger: TCGTCTCTCTCTTTCTGCAGCACAACAAGATTCGCAGCGTGGAGGGGAGCCAGCTGAAGGCCTACCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000475366.5
ENST00000498287.5
CDS GCA 72 bp CCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTaGATACGACCCGGCCACCGTGTTCCATCTTATGTG +
Preference number: 6 (lower is better)
Translates to: PWSNSPLRCCSH*IRPGHRVPSYV
Trigger: CACATAAGATGGAACACGGTGGCCGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp GCCTGCCAGGTTGAGCTCCTTTATAGGCGGTCCGTGTaGAAAGCAGGTGTTCCGCACTTCCGTGATGTTGTT +
Preference number: 6 (lower is better)
Translates to: ACQVELLYRRSV*KAGVPHFRDVV
Trigger: AACAACATCACGGAAGTGCGGAACACCTGCTTTCCACACGGACCGCCTATAAAGGAGCTCAACCTGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000475366.5
ENST00000497721.5
ENST00000498287.5
CDS CCA 72 bp TGCTCTGACCCTTCAGTGATTCTGGGTGGGCACAGGTaGCTGTCACAAAGGCCTGCAGCATCCTGCCAATTA +
Preference number: 6 (lower is better)
Translates to: CSDPSVILGGHR*LSQRPAASCQL
Trigger: TAATTGGCAGGATGCTGCAGGCCTTTGTGACAGCCACCTGTGCCCACCCAGAATCACTGAAGGGTCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp CCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTaGCTGGGTGATGATCTGTGGCTTCAGGAAGTCATC +
Preference number: 6 (lower is better)
Translates to: PDVLAHHSHGGF*LGDDLWLQEVI
Trigger: GATGACTTCCTGAAGCCACAGATCATCACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp GTGTACTCCATCACTTCCCCGTCCTGCGCGTGGACGTaGACAAAGTTCTCCATGTCTGCATTGGTCAGGACT +
Preference number: 6 (lower is better)
Translates to: VYSITSPSCAWT*TKFSMSALVRT
Trigger: AGTCCTGACCAATGCAGACATGGAGAACTTTGTCCACGTCCACGCGCAGGACGGGGAAGTGATGGAGTACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp ACCAGGCTGTTGTACTCCAGGTGCAGCACATGCATCTaGGACAGTCCCCAGAAGGCCCCATCTGTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: TRLLYSRCSTCI*DSPQKAPSVSL
Trigger: CAAACTGACAGATGGGGCCTTCTGGGGACTGTCCAAGATGCATGTGCTGCACCTGGAGTACAACAGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000491821.1
ENST00000497721.5
CDS CAA 72 bp TGTCGAGCCCTGAGAAGGCGCCGCTCGTGTCCTCTATaGTGCCCGAAATCTCGTTATGGTCCAGATCCAAGA +
Preference number: 6 (lower is better)
Translates to: CRALRRRRSCPL*CPKSRYGPDPR
Trigger: TCTTGGATCTGGACCATAACGAGATTTCGGGCACAATAGAGGACACGAGCGGCGCCTTCTCAGGGCTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS CAA 90 bp ATCTCGTTATGGTCCAGATCCAAGACTCGCAGGCTCCTGAGTCCCTaGAAGGCACCCTCCGCAATGTGGCTGATGGAATTGTGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: ISLWSRSKTRRLLSP*KAPSAMWLMELWLR
Trigger: TCTCAGCCACAATTCCATCAGCCACATTGCGGAGGGTGCCTTCAAGGGACTCAGGAGCCTGCGAGTCTTGGATCTGGACCATAACGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000383703.3
CDS TCA 72 bp AAGGCCCCATCTGTCAGTTTGCTGATGTTGTTTCGCTaGAGCTTCAGCACCTCCAAGCTGTTGAGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: KAPSVSLLMLFR*SFSTSKLLSPW
Trigger: CCAGGGGCTCAACAGCTTGGAGGTGCTGAAGCTTCAGCGAAACAACATCAGCAAACTGACAGATGGGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
CDS TCA 72 bp TGGACAGTCCCCAGAAGGCCCCATCTGTCAGTTTGCTaGTGTTGTTTCGCTGAAGCTTCAGCACCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: WTVPRRPHLSVC*CCFAEASAPPS
Trigger: GCTTGGAGGTGCTGAAGCTTCAGCGAAACAACATCAGCAAACTGACAGATGGGGCCTTCTGGGGACTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
CDS GCA 72 bp GGCAACGCTGTGAGTGTCGGGCTCTGGAAAGTGGCTTaGATCTCTTGGACACACACCATTGCTCTCAATGTG +
Preference number: 6 (lower is better)
Translates to: GNAVSVGLWKVA*ISWTHTIALNV
Trigger: CACATTGAGAGCAATGGTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAGCCCGACACTCACAGCGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp ATGGTGGTGGTCCGGATGGTTATGTCGTGGGGCGTTTaGGTGAATGATGGCAACACATTCACGGTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: MVVVRMVMSWGV*VNDGNTFTVSL
Trigger: CAGGCTCACCGTGAATGTGTTGCCATCATTCACCAAAACGCCCCACGACATAACCATCCGGACCACCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp GTCGGTCAGAAAGGGTCCCCTGAGAAGAGAGGTAGCTaGGAACATCTGGTGGCACGACGGTTTCATCTGTGT +
Preference number: 6 (lower is better)
Translates to: VGQKGSPEKRGS*EHLVARRFHLC
Trigger: ACACAGATGAAACCGTCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCTCAGGGGACCCTTTCTGACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp CACTGTACTCTTCACTCTTCTTCCTGGTCTGGTAGATaGTGCACACCCAGACCAGTGACGTCAGGACGATGC +
Preference number: 6 (lower is better)
Translates to: HCTLHSSSWSGR*CTPRPVTSGRC
Trigger: GCATCGTCCTGACGTCACTGGTCTGGGTGTGCATCATCTACCAGACCAGGAAGAAGAGTGAAGAGTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp TCATCGAGCTCCACTAGGGCTTTCCAAATATTTACTTaGCACTCGCACTCTGCTGAGCTCCCCGTCACTGGG +
Preference number: 6 (lower is better)
Translates to: SSSSTRAFQIFT*HSHSAELPVTG
Trigger: CCCAGTGACGGGGAGCTCAGCAGAGTGCGAGTGTCAAGTAAATATTTGGAAAGCCCTAGTGGAGCTCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495037.1
CDS GCA 72 bp GTCCTGCGCGTGGACGTGGACAAAGTTCTCCATGTCTaGATTGGTCAGGACTTCATTGTCTTTCTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: VLRVDVDKVLHV*IGQDFIVFLPG
Trigger: GCCTGGAAGAAAGACAATGAAGTCCTGACCAATGCAGACATGGAGAACTTTGTCCACGTCCACGCGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS GCA 72 bp AAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTaGCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: KQASTGLPRALD*LKLMKMQAVAL
Trigger: CAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp GGTCCCCTGAGAAGAGAGGTAGCTTGGAACATCTGGTaGCACGACGGTTTCATCTGTGTTGGTGACACTGTA +
Preference number: 6 (lower is better)
Translates to: GPLRREVAWNIW*HDGFICVGDTV
Trigger: TACAGTGTCACCAACACAGATGAAACCGTCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCTCAGGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp AAGGGTCCCCTGAGAAGAGAGGTAGCTTGGAACATCTaGTGGCACGACGGTTTCATCTGTGTTGGTGACACT +
Preference number: 6 (lower is better)
Translates to: KGPLRREVAWNI*WHDGFICVGDT
Trigger: AGTGTCACCAACACAGATGAAACCGTCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCTCAGGGGACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp TCGGTCAGAAAGGGTCCCCTGAGAAGAGAGGTAGCTTaGAACATCTGGTGGCACGACGGTTTCATCTGTGTT +
Preference number: 6 (lower is better)
Translates to: SVRKGPLRREVA*NIWWHDGFICV
Trigger: AACACAGATGAAACCGTCGTGCCACCAGATGTTCCAAGCTACCTCTCTTCTCAGGGGACCCTTTCTGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp AGGCAACGCTGTGAGTGTCGGGCTCTGGAAAGTGGCTaGCATCTCTTGGACACACACCATTGCTCTCAATGT +
Preference number: 6 (lower is better)
Translates to: RQRCECRALESG*HLLDTHHCSQC
Trigger: ACATTGAGAGCAATGGTGTGTGTCCAAGAGATGCAAGCCACTTTCCAGAGCCCGACACTCACAGCGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp TGGACGTGGACAAAGTTCTCCATGTCTGCATTGGTCAGGACTTCATaGTCTTTCTTCCAGGCAAAGGTCATGGGGGAGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: WTWTKFSMSALVRTS*SFFQAKVMGELLLL
Trigger: CAGCAGCAGCAGCTCCCCCATGACCTTTGCCTGGAAGAAAGACAATGAAGTCCTGACCAATGCAGACATGGAGAACTTTGTCCACGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp CGAATCCTGTTCCGATTGAGGTCCAGTTGTGTCAGCCTGGGTAGCTaGAATGCTCTTACAGGAAGCTGGGTGATCCTGTTTTTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: RILFRLRSSCVSLGS*NALTGSWVILFLLR
Trigger: CCTGAGCAAAAACAGGATCACCCAGCTTCCTGTAAGAGCATTCAAGCTACCCAGGCTGACACAACTGGACCTCAATCGGAACAGGATTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
ENST00000498287.5
CDS CCA 72 bp GTCAGCCTGGGTAGCTTGAATGCTCTTACAGGAAGCTaGGTGATCCTGTTTTTGCTCAGGCGAAGAGTTAGC +
Preference number: 6 (lower is better)
Translates to: VSLGSLNALTGS*VILFLLRRRVS
Trigger: GCTAACTCTTCGCCTGAGCAAAAACAGGATCACCCAGCTTCCTGTAAGAGCATTCAAGCTACCCAGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
ENST00000498287.5
CDS CAA 72 bp AGCCCCGAGAATGCTCTCTTAGCCACAGACTTGATCTaGTTTCCAAACAGAGTCAGCTTGCTGAGGCTGTCG +
Preference number: 6 (lower is better)
Translates to: SPENALLATDLI*FPNRVSLLRLS
Trigger: CGACAGCCTCAGCAAGCTGACTCTGTTTGGAAACAAGATCAAGTCTGTGGCTAAGAGAGCATTCTCGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273261.8
ENST00000496559.6
CDS CAA 72 bp CAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTaGCTAAAGTCCAGGAAGAATCCCCTTTCCCATCTA +
Preference number: 6 (lower is better)
Translates to: QAVALWSPGDTT*LKSRKNPLSHL
Trigger: TAGATGGGAAAGGGGATTCTTCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 90 bp CTGGGTAGCTTGAATGCTCTTACAGGAAGCTGGGTGATCCTGTTTTaGCTCAGGCGAAGAGTTAGCAGCGACCGTGACAGACCATCAAAT +
Preference number: 6 (lower is better)
Translates to: LGSLNALTGSWVILF*LRRRVSSDRDRPSN
Trigger: ATTTGATGGTCTGTCACGGTCGCTGCTAACTCTTCGCCTGAGCAAAAACAGGATCACCCAGCTTCCTGTAAGAGCATTCAAGCTACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
ENST00000498287.5
CDS CAA 90 bp ATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTaGCTAAAGTCCAGGAAGAATCCCCTTTCCCATCTAGAGATGCCA +
Preference number: 6 (lower is better)
Translates to: MKMQAVALWSPGDTT*LKSRKNPLSHLEMP
Trigger: TGGCATCTCTAGATGGGAAAGGGGATTCTTCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp TCTTCATCTTCACAAAGGCATCAAACTGGACAGATCTaGTCGCATTCCCTCCAAGGTTCAGGTGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: SSSSQRHQTGQI*SHSLQGSGAPG
Trigger: GCCTGGAGCACCTGAACCTTGGAGGGAATGCGATCAGATCTGTCCAGTTTGATGCCTTTGTGAAGATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS TCA 72 bp AATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTaGTACAACCTTGCTAAAGTCCAGGAAGAATCCCCT +
Preference number: 6 (lower is better)
Translates to: NEDAGCSSVESG*YNLAKVQEESP
Trigger: AGGGGATTCTTCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CCA 72 bp TGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTaGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: CLKLMKMQAVAL*SPGDTTLLKSR
Trigger: CCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6
CDS CAA 72 bp TTGAATGCTCTTACAGGAAGCTGGGTGATCCTGTTTTaGCTCAGGCGAAGAGTTAGCAGCGACCGTGACAGA +
Preference number: 6 (lower is better)
Translates to: LNALTGSWVILF*LRRRVSSDRDR
Trigger: TCTGTCACGGTCGCTGCTAACTCTTCGCCTGAGCAAAAACAGGATCACCCAGCTTCCTGTAAGAGCATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
ENST00000498287.5
CDS CAA 72 bp TTCCGATTGAGGTCCAGTTGTGTCAGCCTGGGTAGCTaGAATGCTCTTACAGGAAGCTGGGTGATCCTGTTT +
Preference number: 6 (lower is better)
Translates to: FRLRSSCVSLGS*NALTGSWVILF
Trigger: AAACAGGATCACCCAGCTTCCTGTAAGAGCATTCAAGCTACCCAGGCTGACACAACTGGACCTCAATCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000497721.5
ENST00000498287.5
CDS CAA 72 bp AGCCCCGAGAATGCTCTCTTAGCCACAGACTTGATCTaGTTTCCAAACAGAGTCCTTCCCCCAGCAGACATA +
Preference number: 6 (lower is better)
Translates to: SPENALLATDLI*FPNRVLPPADI
Trigger: TATGTCTGCTGGGGGAAGGACTCTGTTTGGAAACAAGATCAAGTCTGTGGCTAAGAGAGCATTCTCGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383703.3
CDS CAA 72 bp AGCCCCGAGAATGCTCTCTTAGCCACAGACTTGATCTaGTTTCCAAACAGAGTCCACAGGCTCTCCTCTATC +
Preference number: 6 (lower is better)
Translates to: SPENALLATDLI*FPNRVHRLSSI
Trigger: GATAGAGGAGAGCCTGTGGACTCTGTTTGGAAACAAGATCAAGTCTGTGGCTAAGAGAGCATTCTCGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495037.1
CDS CAA 72 bp TATCCAAGGATCTCCACTCAGGAGAAGGTTCTGTACTaGCTGCTACCTCTCTTCAGTAAGCTAAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: YPRISTQEKVLY*LLPLFSKLSSH
Trigger: GTGGCTGCTTAGCTTACTGAAGAGAGGTAGCAGCAAGTACAGAACCTTCTCCTGAGTGGAGATCCTTGGATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495671.1
CDS CAA 90 bp CTAGTATCCTATCCAAGGATCTCCACTCAGGAGAAGGTTCTGTACTaGCTGCTACCTCTCTTCAGTAAGCTAAGCAGCCACATATTCCCT +
Preference number: 6 (lower is better)
Translates to: LVSYPRISTQEKVLY*LLPLFSKLSSHIFP
Trigger: AGGGAATATGTGGCTGCTTAGCTTACTGAAGAGAGGTAGCAGCAAGTACAGAACCTTCTCCTGAGTGGAGATCCTTGGATAGGATACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495671.1
CDS CAA 72 bp CCGTGTGGAAAGCAGGTGTTCCGCACTTCCGTGATGTaGTTCAAACTCAGATCTAACACTTCTAAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: PCGKQVFRTSVM*FKLRSNTSKER
Trigger: CCTTTCCTTAGAAGTGTTAGATCTGAGTTTGAACAACATCACGGAAGTGCGGAACACCTGCTTTCCACACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000475366.5
ENST00000497721.5
ENST00000498287.5
CDS TCA 72 bp ACCTCTCTTTCCCGTAGAGATTGGTATGACAAGAACTaGGGTAGACAAAACCTAGCTTTTTGGTGCCAACAG +
Preference number: 6 (lower is better)
Translates to: TSLSRRDWYDKN*GRQNLAFWCQQ
Trigger: CTGTTGGCACCAAAAAGCTAGGTTTTGTCTACCTCAGTTCTTGTCATACCAATCTCTACGGGAAAGAGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000496559.6
CDS CCA 72 bp TCTTTAAGATTCTTCATCTTCACAAAGGCATCAAACTaGACAGATCTGATCGCATTCCCTCCAAGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: SLRFFIFTKASN*TDLIAFPPRFR
Trigger: CCTGAACCTTGGAGGGAATGCGATCAGATCTGTCCAGTTTGATGCCTTTGTGAAGATGAAGAATCTTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273261.8
ENST00000383703.3
ENST00000495037.1
ENST00000496559.6