RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRFN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000126243

Ensembl transcript IDs: ENST00000246529.4, ENST00000585876.1, ENST00000587257.1, ENST00000588831.5

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTTCCAGCTTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATaGCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTT +
Preference number: 1 (lower is better)
Translates to: ISSFSLRPGVLHPPE*HILDILRAPYTYQV
Trigger: AACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCTGGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR CCA 90 bp AGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATaGATCGCCATCCTCAGCCTCCTCCGGGGTCCTCAGACTGAACTG +
Preference number: 1 (lower is better)
Translates to: RACSEPTRREHLLSE*IAILSLLRGPQTEL
Trigger: CAGTTCAGTCTGAGGACCCCGGAGGAGGCTGAGGATGGCGATCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR GCA 90 bp CCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCCTCTaGCTGAAAGAGCTTTCCTTCTGCTCTTTGCCCAGTTATCTCCTT +
Preference number: 1 (lower is better)
Translates to: PSAQGTPPPCLCCAL*LKELSFCSLPSYLL
Trigger: AAGGAGATAACTGGGCAAAGAGCAGAAGGAAAGCTCTTTCAGGCAGAGGGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CCA 90 bp CTTCCCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTaGGGATGTGTCTGTCTCCCATTTGACTTTAGGCCCCTGCGGGCA +
Preference number: 1 (lower is better)
Translates to: LPSSPHPWSLCAITV*GCVCLPFDFRPLRA
Trigger: TGCCCGCAGGGGCCTAAAGTCAAATGGGAGACAGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CCA 90 bp ATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTaGCCATATCATCTTTCCCAAACCTGCTCCTCCTCCCTGGTCCTA +
Preference number: 1 (lower is better)
Translates to: ILDILRAPYTYQVPH*PYHLSQTCSSSLVL
Trigger: TAGGACCAGGGAGGAGGAGCAGGTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR GCA 90 bp TACACCTACCAAGTTCCCCACTGGCCATATCATCTTTCCCAAACCTaGTCCTCCTCCCTGGTCCTATATGAGGGCAGTCCCCACCATCTT +
Preference number: 1 (lower is better)
Translates to: YTYQVPHWPYHLSQT*SSSLVLYEGSPHHL
Trigger: AAGATGGTGGGGACTGCCCTCATATAGGACCAGGGAGGAGGAGCAGGTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR TCA 90 bp ACAAGAAGCCGTCTTAACCCCAGCAGCGTCAGTTCCCATCTCTGCTaGCAAAGCCCTCATTTCTATTTCCAGCTTCAGCCTCAGACCAGG +
Preference number: 1 (lower is better)
Translates to: TRSRLNPSSVSSHLC*QSPHFYFQLQPQTR
Trigger: CCTGGTCTGAGGCTGAAGCTGGAAATAGAAATGAGGGCTTTGTCAGCAGAGATGGGAACTGACGCTGCTGGGGTTAAGACGGCTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR TCA 90 bp CCGCAGCCTTTATTTATATCATTGAACACAAGAGTTTCTTGGGTCTaGATTGCTTGGTCTTCTTCCCCCTGTCCCTCTGCCTGCTGGTCC +
Preference number: 1 (lower is better)
Translates to: PQPLFISLNTRVSWV*IAWSSSPCPSACWS
Trigger: GGACCAGCAGGCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTGTTCAATGATATAAATAAAGGCTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCGTCCTCAGACTGAACTaGGCGGGGAGGGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCAVLRLN*AGRGCL
Trigger: GAGACACCCCCTCCCCGCCCAGTTCAGTCTGAGGAC...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR-3UTR CCA 90 bp AGCTTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATGCCACATCCTGGACTGCCCCAGCTTCCCCTaGGGCTCCCAGCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: SFSLRPGVLHPPECHILDCPSFP*GSQLQS
Trigger: AGACTGAAGCTGGGAGCCCCAGGGGAAGCTGGGGCA...GTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR GCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTAGGGTGTCCGGGTCCTaGTGTCCGTGGGGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSRVSGS*CPWGQR
Trigger: CCTCTGGCCCCACGGACAGCAGGACCCGGACACCCT...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR-3UTR GCA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTTTGACTTTAGGCCCCTaGGGGCAGGGCTCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSLTLGP*GQGSGL
Trigger: TAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR GCA 90 bp GAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCTCTTCCCTGGTCACTCTGTaGTATCACTGTCTGGGGATG +
Preference number: 2 (lower is better)
Translates to: ELLSLEVLDPAQPSCLTSSLVTL*YHCLGM
Trigger: CATCCCCAGACAGTGATAGCACAGAGTGACCAGGGA...AGAGGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CCA 90 bp CAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTTTCCCAAACGTCCTCAGACTGAACTaGGCGGGGAGGGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: QGPLHLPSSPLAISSFPNVLRLN*AGRGCL
Trigger: GAGACACCCCCTCCCCGCCCAGTTCAGTCTGAGGAC...GTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR GCA 90 bp CACAAGAGTTTCTTGGGTCTGAATTGCTTGGTCTTCTTCCCCCTGTCCCTCTGCCCCCAACCCAGGGCATaGTCAGAGCCGACACGCAGG +
Preference number: 2 (lower is better)
Translates to: HKSFLGLNCLVFFPLSLCPQPRA*SEPTRR
Trigger: CCTGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGG...GCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR CAA 90 bp GGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTGTCTCCCATTaGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCA +
Preference number: 2 (lower is better)
Translates to: GHSVLSLSGDVSVSH*TLGPCGQGSGLSGS
Trigger: TGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAAATGGGAGACAGACACATCCCCAGACAGTGATAGCACAGAGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR-3UTR GCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCAGGGTGTCCGGGTCCTaGTGTCCGTGGGGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSRVSGS*CPWGQR
Trigger: CCTCTGGCCCCACGGACAGCAGGACCCGGACACCCT...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR-3UTR CCA 90 bp TGGAATCATCCCCCACAAGAAGCCGTCTTAACCCCAGCAGCGTCAGTTCCCATCCTTCAGTCTTCCCCTTaGGTCCACCCTACTCATAGC +
Preference number: 2 (lower is better)
Translates to: WNHPPQEAVLTPAASVPILQSSP*VHPTHS
Trigger: GCTATGAGTAGGGTGGACCCAAGGGGAAGACTGAAG...GATGGGAACTGACGCTGCTGGGGTTAAGACGGCTTCTTGTGGGGGATGATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR GCA 90 bp AGCTTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATGCCACATCCTGGACAAAGAGCTTTCCTTCTaGTCTTTGCCCAGTTATCTC +
Preference number: 2 (lower is better)
Translates to: SFSLRPGVLHPPECHILDKELSF*SLPSYL
Trigger: GAGATAACTGGGCAAAGAGCAGAAGGAAAGCTCTTT...GTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR GCA 90 bp CACAAGAGTTTCTTGGGTCTGAATTGCTTGGTCTTCTTCCCCCTGTCCCTCTGCCCACCACCTTGCTTGTaGTGTGCCCTCTGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: HKSFLGLNCLVFFPLSLCPPPCL*CALCLK
Trigger: TTTCAGGCAGAGGGCACAGCACAAGCAAGGTGGTGG...GCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR TCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGACCACACCTGGGGCTaGGCAAGGGTACCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: LCPVISFICHSQITCVLLDHTWG*ARVPLL
Trigger: CAGAAGAGGTACCCTTGCTCAGCCCCAGGTGTGGTC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR-3UTR CCA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTGTCTTCGCCCAAGCTTaGAAAAATAGGACTTTCTTG +
Preference number: 2 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSVFAQA*KNRTFL
Trigger: CAAGAAAGTCCTATTTTTCCAAGCTTGGGCGAAGAC...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR GCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGAGGACTTTCTTGTTTTaGCCCGGTGTCCCCGACACC +
Preference number: 2 (lower is better)
Translates to: CPVISFICHSQITCVLLQRTFLF*PGVPDT
Trigger: GGTGTCGGGGACACCGGGGCAAAACAAGAAAGTCCT...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTGTCTTCGCCCAAGCTTaGAAAAATAGGACTTTCTTG +
Preference number: 2 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSVFAQA*KNRTFL
Trigger: CAAGAAAGTCCTATTTTTCCAAGCTTGGGCGAAGAC...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CAA 90 bp TGGTCTTCTTCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGTCTaGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCC +
Preference number: 2 (lower is better)
Translates to: WSSSPCPSACWSCLV*VRFFFASPLNMESP
Trigger: GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGAAGAAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR CAA 90 bp GGGGTCACCGCAGCCTTTATTTATATCATTGAACACAAGAGTTTCTaGGGTCTGAATTGCTTGGTCTTCTTCCCCCTGTCCCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GVTAAFIYIIEHKSF*GLNCLVFFPLSLCL
Trigger: CAGGCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTGTTCAATGATATAAATAAAGGCTGCGGTGACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CCA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCGGGTCCTGCTGTCCGTaGGGCCAGAGGACCCTTAGA +
Preference number: 2 (lower is better)
Translates to: CLVLVRFFFASPLNMESPGSCCP*GQRTLR
Trigger: TCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCC...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGCAAGGGTACCTCTTCTaGACTGTCACAATCCCCCAG +
Preference number: 2 (lower is better)
Translates to: CPVISFICHSQITCVLLQQGYLF*TVTIPQ
Trigger: CTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTG...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR-3UTR GCA 90 bp CCTTGGGTCCACCCTACTCATAGCACTAGAAGGATCTTCCTGAAGCCCCAAACTTTTCCTTCTGCTCTTTaGCCAGTTATCTCCTTCATA +
Preference number: 2 (lower is better)
Translates to: PWVHPTHSTRRIFLKPQTFPSAL*PVISFI
Trigger: TATGAAGGAGATAACTGGGCAAAGAGCAGAAGGAAA...AGTTTGGGGCTTCAGGAAGATCCTTCTAGTGCTATGAGTAGGGTGGACCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR CAA 90 bp TTTATTTATATCATTGAACACAAGAGTTTCTTGGGTCTGAATTGCTaGGTCTTCTTCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGT +
Preference number: 2 (lower is better)
Translates to: FIYIIEHKSFLGLNC*VFFPLSLCLLVLFS
Trigger: ACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTGTTCAATGATATAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR GCA 72 bp CTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTaGCTCACCTCTACCATAGCACCCCCAGTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: LSLEVLDPAQPS*LTSTIAPPVPR
Trigger: CCTGGGCACTGGGGGTGCTATGGTAGAGGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CCA 72 bp GACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTaGATCACCACAGCATCCCCCAACCCAGGGCATGCT +
Preference number: 3 (lower is better)
Translates to: DFRPLRAGLRAI*ITTASPNPGHA
Trigger: AGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR GCA 72 bp TTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATaGCACATCCTGGACATCCTCAGGGCCCCCTACACC +
Preference number: 3 (lower is better)
Translates to: FSLRPGVLHPPE*HILDILRAPYT
Trigger: GGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CAA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCAGCGATTTGGTGAGTTaGAGGCCAGGTCCCACAGGG +
Preference number: 3 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCASDLVS*RPGPTG
Trigger: CCCTGTGGGACCTGGCCTCAAACTCACCAAATCGCT...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CCA 72 bp CTGACCACACCTGGGGCTGAGCAAGGGTACCTCTTCTaGACTGTCACAATCCCCCAGGCTTCCCTCATCCCC +
Preference number: 3 (lower is better)
Translates to: LTTPGAEQGYLF*TVTIPQASLIP
Trigger: GGGGATGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCCCAGGTGTGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CCA 72 bp GACCAGGGGTCCTGCACCCTCCTGAATGCCACATCCTaGACATCCTCAGGGCCCCCTACACCTACCAAGTTC +
Preference number: 3 (lower is better)
Translates to: DQGSCTLLNATS*TSSGPPTPTKF
Trigger: GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CAA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTACACCACCACCTTGCTaGTGCTGTGCCCTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSTPPPC*CCALCL
Trigger: CAGGCAGAGGGCACAGCACAAGCAAGGTGGTGGTGT...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CAA 90 bp GAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCTCTAAAACCATGAGCGATTaGGTGAGTTTGAGGCCAGGT +
Preference number: 3 (lower is better)
Translates to: ELLSLEVLDPAQPSCLTSKTMSD*VSLRPG
Trigger: ACCTGGCCTCAAACTCACCAAATCGCTCATGGTTTT...AGAGGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CAA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCCTTTCCTTCTGCTCTTaGCCCAGTTATCTCCTTCAT +
Preference number: 3 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCALSFCS*PSYLLH
Trigger: ATGAAGGAGATAACTGGGCAAAGAGCAGAAGGAAAG...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR GCA 72 bp TATCTGGATCACCACAGCATCCCCCAACCCAGGGCATaGTCAGAGCCGACACGCAGGGAACATCTATTGTCT +
Preference number: 3 (lower is better)
Translates to: YLDHHSIPQPRA*SEPTRREHLLS
Trigger: AGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR GCA 72 bp CAGGCTTCCCTCATCCCCACATCCCTGGTCACTCTGTaGTATCACTGTCTGGGGATGTGTCTGTCTCCCATT +
Preference number: 3 (lower is better)
Translates to: QASLIPTSLVTL*YHCLGMCLSPI
Trigger: AATGGGAGACAGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGGGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR GCA 72 bp TTTCTATTTCCAGCTTCAGCCTCAGACCAGGGGTCCTaGACCCTCCTGAATGCCACATCCTGGACATCCTCA +
Preference number: 3 (lower is better)
Translates to: FLFPASASDQGS*TLLNATSWTSS
Trigger: TGAGGATGTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCTGGAAATAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR TCA 72 bp GGGTCCACCCTACTCATAGCACTAGAAGGATCTTCCTaGAGCCCCAAACTGACCCCATTCCTCCCTTGCATA +
Preference number: 3 (lower is better)
Translates to: GSTLLIALEGSS*SPKLTPFLPCI
Trigger: TATGCAAGGGAGGAATGGGGTCAGTTTGGGGCTTCAGGAAGATCCTTCTAGTGCTATGAGTAGGGTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CAA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCAGCGATTTGGTGAGTTaGAGGCCAGGTCCCACAGGG +
Preference number: 3 (lower is better)
Translates to: CLVLVRFFFASPLNMESPSDLVS*RPGPTG
Trigger: CCCTGTGGGACCTGGCCTCAAACTCACCAAATCGCT...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR-3UTR CAA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAAAAACCATGAGCGATTaGGTGAGTTTGAGGCCAGGT +
Preference number: 3 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPKTMSD*VSLRPG
Trigger: ACCTGGCCTCAAACTCACCAAATCGCTCATGGTTTT...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCACGAGGCCCAACGTGTTaGCGTTGCCCAGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPRGPTC*RCPGGP
Trigger: TGGGCCGCCTGGGCAACGTCAACACGTTGGGCCTCG...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCCAGCCGGCCCTGGGGTaGCACCCAACGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRAQPALG*HPTHTG
Trigger: CCCCGTGTGCGTTGGGTGTCACCCCAGGGCCGGCTG...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCCGCCGCCCAGCGCGATaGTCATCGTGCCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCARRPAR*SSCRPG
Trigger: TCCTGGGCGGCACGATGATCATCGCGCTGGGCGGCG...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCAGCCGGCCGCCAGCGCTaGCAGCTGGTTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPAGRQR*QLVVAE
Trigger: CTCAGCAACAACCAGCTGGCAGCGCTGGCGGCCGGC...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCAGGCAGCCGGCCGACCTaGGGGCACAGCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHAGSRPT*GHSQRW
Trigger: CCACCTCTGGCTGTGCCCGCAGGTCGGCCGGCTGCC...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCAGCCGCCCAGAGCAGGTaGGGACGCGCAGGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHAAAQSR*GRAGLE
Trigger: CTCGAGGCCTGCGCGTCCCCACCTGCTCTGGGCGGC...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGGTGCGGCGCCCCGCATaGCCGCAGCGCAGGTTCGGT +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTVRRPA*PQRRFG
Trigger: ACCGAACCTGCGCTGCGGCCATGCGGGGCGCCGCAC...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCAGCTGGACCACGGTGTaGGCCCTGAGCGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRASWTTV*ALSAAG
Trigger: GCCCGCGGCGCTCAGGGCCCACACCGTGGTCCAGCT...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCACGCCGCCCAGCGCGATaGTCATCGTGCCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHARRPAR*SSCRPG
Trigger: TCCTGGGCGGCACGATGATCATCGCGCTGGGCGGCG...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACGGTTGCCATCCAGGTaGAGGGCACGCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRRLPSR*RARRAR
Trigger: GCGGGCCCTGCGTGCCCTGCACCTGGATGGCAACCG...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TCTGAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCAGGGTGTCCGGGTCCTaGTGTCCGTGGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SELLSLEVLDPAQPSCLTRVSGS*CPWGQR
Trigger: CCTCTGGCCCCACGGACAGCAGGACCCGGACACCCT...GGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCGCGGTCCAGCGAGGGTaGCACGAACAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCAAVQRG*HEQEAC
Trigger: GCAGGCCTCCTGTTCGTGCCACCCTCGCTGGACCGC...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGACCAGGCCGCGCAGCTaGCCCTCGCCCAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTTRPRS*PSPSEV
Trigger: GACCTCACTGGGCGAGGGCCAGCTGCGCGGCCTGGT...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCGGCCCAGGGCGCCGTTaGTCTGGGAGCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCAGPGRR*SGSKRC
Trigger: GCAGCGTTTGCTCCCAGACCAACGGCGCCCTGGGCC...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCTGGCCCTCGCCCAGTaGGGTCAGCCGGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTLALAQ*GQPVAI
Trigger: GATGGCAACCGGCTGACCTCACTGGGCGAGGGCCAG...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCAGCCGGCCCTGGGGTaGCACCCAACGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFQPALG*HPTHTG
Trigger: CCCCGTGTGCGTTGGGTGTCACCCCAGGGCCGGCTG...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAACAGGCCGCGTGGCCGTaGGCCCCGTGGCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKQAAWP*APWRCP
Trigger: AGGACAGCGCCACGGGGCTCACGGCCACGCGGCCTG...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTCTCTGGGTCCCCCACTaGCCGGCAGCGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSLWVPH*PAAQGS
Trigger: GCTGCCCTGCGCTGCCGGGCAGTGGGGGACCCAGAG...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCCCCCAACCCAGGGCATaGTCAGAGCCGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCAPQPRA*SEPTRR
Trigger: CCTGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGG...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGGCAGGCCTGTCATGTTaGCCAGGTCGCGGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTAGLSC*PGRGGA
Trigger: TGCGCCGCCGCGACCTGGCCAACATGACAGGCCTGC...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATGCTCCAGCGTCCCATTaGGGAAGGCGCGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHAPASH*GRRGHG
Trigger: GCCGTGCCCGCGCCTTCCCCAATGGGACGCTGGAGC...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTGTGCGGCGCCCCGCATaGCCGCAGCGCAGGTTCGGT +
Preference number: 4 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSVRRPA*PQRRFG
Trigger: ACCGAACCTGCGCTGCGGCCATGCGGGGCGCCGCAC...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCGGTCCCACAGGTTCGTaGCCGGGCCCCCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFGPTGS*PGPQGS
Trigger: CGAGCCCTGGGGGCCCGGCCACGAACCTGTGGGACC...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCAGGGTCCTGCTGTCCGTaGGGCCAGAGGACCCTTAGA +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPGSCCP*GQRTLR
Trigger: TCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCC...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGGGCGCACGGAGGCGATaGAGTTGTCTGCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTGARRR*SCLPAA
Trigger: TGCGGCTGGCAGACAACTTCATCGCCTCCGTGCGCC...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCAAGAGGTGGTGAGCGGTaGGTCACCACGGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSRGGER*VTTGGS
Trigger: CGAGCCGCCCGTGGTGACTCACCGCTCACCACCTCT...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCACAGCCAGAGGTGGTaGGCGGTGAGTCACCACGGG +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTHSQRW*AVSHHG
Trigger: CCCGTGGTGACTCACCGCTCACCACCTCTGGCTGTG...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCATCACCCGGCTCGGTaGCCAGCAGCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHHHPAR*PAAPAS
Trigger: GGACGCTGGAGCTGCTGGTCACCGAGCCGGGTGATG...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCACCCGGGATAGGCCGCTaGTCCGGCCACTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHAPGIGR*SGHWTR
Trigger: TCTTGTCCAGTGGCCGGATCAGCGGCCTATCCCGGG...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGCAGGCCGCGTGGCCGTaGGCCCCGTGGCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLQAAWP*APWRCP
Trigger: AGGACAGCGCCACGGGGCTCACGGCCACGCGGCCTG...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCAGGGGGTCACAGCTGGTaGTGTTGGCTAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPGGHSW*CWLAEE
Trigger: CTCCTCAGCTAGCCAACAGCACCAGCTGTGACCCCC...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCAGCAGCTGTGGCCCCGTaGTCAGTCACCTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHAAAVAP*SVTWTP
Trigger: TGGCGTCCAGGTGACTGAGCACGGGGCCACAGCTGC...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATAGGGTGTCCGGGTCCTaGTGTCCGTGGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHRVSGS*CPWGQR
Trigger: CCTCTGGCCCCACGGACAGCAGGACCCGGACACCCT...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTTTCCCAAACCTGGGACACGCGGGATaGGGGCACCGCAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QGPLHLPSSPLAISSFPNLGHAG*GHRSAG
Trigger: GCCTGCGCTGCGGTGCCCCCATCCCGCGTGTCCCAG...GTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp AGCTTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATGCCACATCCTGGACCTGGGTGTGGCTGACTaGGGTGGGGATGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFSLRPGVLHPPECHILDLGVAD*GGDEAG
Trigger: CCCTGCCTCATCCCCACCCCAGTCAGCCACACCCAG...GTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACTGGGTGTGGCTGACTaGGGTGGGGATGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRLGVAD*GGDEAG
Trigger: CCCTGCCTCATCCCCACCCCAGTCAGCCACACCCAG...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCAGCAGGCCTGTCATGTTaGCCAGGTCGCGGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSAGLSC*PGRGGA
Trigger: TGCGCCGCCGCGACCTGGCCAACATGACAGGCCTGC...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCCCTAGCAGCCGGCCCTaGGGTGACACCCAACGCACA +
Preference number: 4 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRAPSSRP*GDTQRT
Trigger: TGTGCGTTGGGTGTCACCCCAGGGCCGGCTGCTAGG...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATGGCTCGCAGTCCAGCTaGACCACGGTGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHGSQSS*TTVWAL
Trigger: CAGGGCCCACACCGTGGTCCAGCTGGACTGCGAGCC...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAAGGTCCCACAGGTTCGTaGCCGGGCCCCCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKGPTGS*PGPQGS
Trigger: CGAGCCCTGGGGGCCCGGCCACGAACCTGTGGGACC...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGACTCTGGGTCCCCCACTaGCCGGCAGCGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGLWVPH*PAAQGS
Trigger: GCTGCCCTGCGCTGCCGGGCAGTGGGGGACCCAGAG...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTGGGCACGGCTTGAGTTaGCTAGCAGCCGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSGHGLS*LAAGPG
Trigger: CCCAGGGCCGGCTGCTAGGCAACTCAAGCCGTGCCC...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCAGAAGCCAGCAGGTTGTaGTCGAGGCCCAACGTGTTG +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPEASRL*SRPNVL
Trigger: CAACACGTTGGGCCTCGACCACAACCTGCTGGCTTC...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTTTCCCAAACGCTCCAGCGTCCCATTaGGGAAGGCGCGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: QGPLHLPSSPLAISSFPNAPASH*GRRGHG
Trigger: GCCGTGCCCGCGCCTTCCCCAATGGGACGCTGGAGC...GTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGGCTCCACAGCAGCTGTaGCCTCGCCAGCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTAPQQL*PRQLHW
Trigger: CCAATGCAGCTGGCGAGGCCACAGCTGCTGTGGAGC...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCACACAGCTGGTGCTGTTaGCTAGCTGAGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPHSWCC*LAEEVV
Trigger: CACCACCTCCTCAGCTAGCCAACAGCACCAGCTGTG...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGAGTCCTCAGACTGAACTaGGCGGGGAGGGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRVLRLN*AGRGCL
Trigger: GAGACACCCCCTCCCCGCCCAGTTCAGTCTGAGGAC...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGTCTTGGTTAGGTTTTTCTTTGGCTGCGGCGGAGGCTaGCTGGGAGGGAGGGGACCG +
Preference number: 4 (lower is better)
Translates to: SPCPSACWSCLVLVRFFFGCGGG*LGGRGP
Trigger: CGGTCCCCTCCCTCCCAGTCAGCCTCCGCCGCAGCC...AAAGAAAAACCTAACCAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp TGGAATCATCCCCCACAAGAAGCCGTCTTAACCCCAGCAGCGTCAGTTCCCATCCATCACCCGGCTCGGTaGCCAGCAGCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: WNHPPQEAVLTPAASVPIHHPAR*PAAPAS
Trigger: GGACGCTGGAGCTGCTGGTCACCGAGCCGGGTGATG...GATGGGAACTGACGCTGCTGGGGTTAAGACGGCTTCTTGTGGGGGATGATTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp GGTCCCACAGGGTGTCCGGGTCCTGCTGTCCGTGGGGCCAGAGGACCCTTAGAGTTAGCAGCACGAAGATaGAGACCAGTACCGAGGCTA +
Preference number: 4 (lower is better)
Translates to: GPTGCPGPAVRGARGPLELAARR*RPVPRL
Trigger: TAGCCTCGGTACTGGTCTTCATCTTCGTGCTGCTAA...CTCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCCGGACACCCTGTGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGGACCACACCTGGGGCTaGGCAAGGGTACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTDHTWG*ARVPLL
Trigger: CAGAAGAGGTACCCTTGCTCAGCCCCAGGTGTGGTC...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TCTGAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCGGTCCTGCACCCTCCTaGATGCCACATCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: SELLSLEVLDPAQPSCLTGPAPS*MPHPGH
Trigger: ATGTCCAGGATGTGGCATTCAGGAGGGTGCAGGACC...GGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTAGCCGGGCCAGCTTGTaGAGGCGGGAAAAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSSRASL*RREKAP
Trigger: CGGCGCTTTTTCCCGCCTGCACAAGCTGGCCCGGCT...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp CACAAGAGTTTCTTGGGTCTGAATTGCTTGGTCTTCTTCCCCCTGTCCCTCTGCGGCAGCCGGCCGACCTaGGGGCACAGCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HKSFLGLNCLVFFPLSLCGSRPT*GHSQRW
Trigger: CCACCTCTGGCTGTGCCCGCAGGTCGGCCGGCTGCC...GCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TCTGAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCCGGGTTCAGGCCCCTTaGAATCCCACAGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SELLSLEVLDPAQPSCLTRVQAP*NPTVQI
Trigger: GATCTGGACTGTGGGATTCCAAGGGGCCTGAACCCG...GGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCCGGGTTCAGGCCCCTTaGAATCCCACAGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCARVQAP*NPTVQI
Trigger: GATCTGGACTGTGGGATTCCAAGGGGCCTGAACCCG...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCACTCGGCTCAAATCTGTaGCAACGGAGTCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPLGSNL*QRSLQT
Trigger: GGTCTGGAGACTCCGTTGCCACAGATTTGAGCCGAG...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCTGAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCCAGAGGTCAGGGCTCTaGAGGGAGCATCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: SELLSLEVLDPAQPSCLTQRSGL*REHLVM
Trigger: CATGACCAGATGCTCCCTCCAGAGCCCTGACCTCTG...GGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTGCGGTCCAGCGAGGGTaGCACGAACAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSAVQRG*HEQEAC
Trigger: GCAGGCCTCCTGTTCGTGCCACCCTCGCTGGACCGC...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCAGGGCGCCGTTGGTCTaGGAGCAAACGCTGCTAACA +
Preference number: 4 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCARAPLV*EQTLLT
Trigger: TGTTAGCAGCGTTTGCTCCCAGACCAACGGCGCCCT...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCTCTCCTGCTCCTCCTCCCTaGTCCTATATGAGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: ELLSLEVLDPAQPSCLTSPAPPP*SYMRAV
Trigger: GACTGCCCTCATATAGGACCAGGGAGGAGGAGCAGG...AGAGGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp GGTCCCACAGGGTGTCCGGGTCCTGCTGTCCGTGGGGCCAGAGGACCCTTAGAGATTCCCGATTCAATCTaGCCATGCCCAGCAATAGGC +
Preference number: 4 (lower is better)
Translates to: GPTGCPGPAVRGARGPLEIPDSI*PCPAIG
Trigger: GCCTATTGCTGGGCATGGCCAGATTGAATCGGGAAT...CTCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCCGGACACCCTGTGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588831.5
CDS-3UTR TCA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGTGGGGTTTAGAGTCTaGGATCCGATCCCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRAVGFRV*DPIPGF
Trigger: GAACCCCGGGATCGGATCTCAGACTCTAAACCCCAC...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTGGCGCACGGAGGCGATaGAGTTGTCTGCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSGARRR*SCLPAA
Trigger: TGCGGCTGGCAGACAACTTCATCGCCTCCGTGCGCC...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATTGGCCGCAATGCAGGTaGAGATGCCACCATCACCCG +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHWPQCR*RCHHHP
Trigger: CGGGTGATGGTGGCATCTTCACCTGCATTGCGGCCA...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TGGAATCATCCCCCACAAGAAGCCGTCTTAACCCCAGCAGCGTCAGTTCCCATCCAGCGGAGGGTGGGGTaGGAGCATCAGGATCCCCGT +
Preference number: 4 (lower is better)
Translates to: WNHPPQEAVLTPAASVPIQRRVG*EHQDPR
Trigger: ACGGGGATCCTGATGCTCTCACCCCACCCTCCGCTG...GATGGGAACTGACGCTGCTGGGGTTAAGACGGCTTCTTGTGGGGGATGATTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp CGCCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTATCGTAGGTCCGGCCTaGCGCCAGGTCCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLSFPQFPECLCQPTPFSIVGPA*RQVRQQ
Trigger: CTGCTGACGGACCTGGCGTCAGGCCGGACCTACGAT...AGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAAATCGTAGGTCCGGCCTaGCGCCAGGTCCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKIVGPA*RQVRQQ
Trigger: CTGCTGACGGACCTGGCGTCAGGCCGGACCTACGAT...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCGATTCAATCTGGGGGTaGAGGCCCCCGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFDSIWG*RPPRWR
Trigger: CCTCCACCTCGGGGGCCTGCACCCCCAGATTGAATC...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCATTAAGCACTCAGGTCTaGAGCAAGGACTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPLSTQV*SKDFRP
Trigger: GGGCCTGAAGTCCTTGCTGCAGACCTGAGTGCTTAA...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TGGAATCATCCCCCACAAGAAGCCGTCTTAACCCCAGCAGCGTCAGTTCCCATCCACGAACAGGAGGCCTaGCCCTGGGCACAGCACGCT +
Preference number: 4 (lower is better)
Translates to: WNHPPQEAVLTPAASVPIHEQEA*PWAQHA
Trigger: AGCGTGCTGTGCCCAGGGGCAGGCCTCCTGTTCGTG...GATGGGAACTGACGCTGCTGGGGTTAAGACGGCTTCTTGTGGGGGATGATTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCCGCGACAGGCTCAGATaGAGCAGGCCTGTCATGTTG +
Preference number: 4 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRARDRLR*SRPVML
Trigger: CAACATGACAGGCCTGCTGCATCTGAGCCTGTCGCG...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCATCCCTGGTCACTCTGTaGTATCACTGTCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPSLVTL*YHCLGM
Trigger: CATCCCCAGACAGTGATAGCACAGAGTGACCAGGGA...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp GAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCTCTCCACCACCTTGCTTGTaGTGTGCCCTCTGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: ELLSLEVLDPAQPSCLTSPPPCL*CALCLK
Trigger: TTTCAGGCAGAGGGCACAGCACAAGCAAGGTGGTGG...AGAGGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATATTCCCGATTCAATCTaGGGGTGCAGGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHIPDSI*GCRPPR
Trigger: CCTCGGGGGCCTGCACCCCCAGATTGAATCGGGAAT...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCATCCAGCCCCATATACTaGGGTTCAGGCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPSSPIY*GSGSRS
Trigger: AGATCTGGAGCCTGAACCCCAGTATATGGGGCTGGA...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACAGCTGGTGCTGTTaGCTAGCTGAGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRHSWCC*LAEEVV
Trigger: CACCACCTCCTCAGCTAGCCAACAGCACCAGCTGTG...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCCCCAGTGACCGATGTTaGGATTCCAGCCCCATATAC +
Preference number: 4 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCAPSDRC*DSSPIY
Trigger: GTATATGGGGCTGGAATCTCAACATCGGTCACTGGG...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCCGATCCCGGGGTTCTaGATTCAGATATTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTPIPGF*IQILGC
Trigger: GCACCCCAATATCTGAATGCAGAACCCCGGGATCGG...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAAGCCGGGCCAGCTTGTaGAGGCGGGAAAAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGSRASL*RREKAP
Trigger: CGGCGCTTTTTCCCGCCTGCACAAGCTGGCCCGGCT...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGAGGACTTTCTTGTTTTaGCCCGGTGTCCCCGACACC +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTRTFLF*PGVPDT
Trigger: GGTGTCGGGGACACCGGGGCAAAACAAGAAAGTCCT...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCACCACCACCTTGCTTGTaGTGTGCCCTCTGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHAPPPCL*CALCLK
Trigger: TTTCAGGCAGAGGGCACAGCACAAGCAAGGTGGTGG...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACTGCACCCTCCTGAATaGCACATCCTGGACATCCTC +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRLHPPE*HILDIL
Trigger: GAGGATGTCCAGGATGTGGCATTCAGGAGGGTGCAG...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGTCTTGGTTAGGTTTTTCTTTTGCAGGCCCCCGAGGTaGAGGTTAGGGCGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SPCPSACWSCLVLVRFFFCRPPR*RLGRGV
Trigger: GACCCCGCGCCCTAACCTCCACCTCGGGGGCCTGCA...AAAGAAAAACCTAACCAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp GGTCCCACAGGGTGTCCGGGTCCTGCTGTCCGTGGGGCCAGAGGACCCTTAGAGTCCAGGGTACAGTACTaGAAATCCAGTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: GPTGCPGPAVRGARGPLESRVQY*KSSPRF
Trigger: AAATCTGGGACTGGATTTCCAGTACTGTACCCTGGA...CTCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCCGGACACCCTGTGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTCAGCCACGTGGCGGATaGTGTTCCGCGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSQPRGG*CSATGS
Trigger: TGAGCCTGTCGCGGAACACCATCCGCCACGTGGCTG...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTCAGTGTCGGCCACCTTaGCAGAAGCAGAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSQCRPP*QKQRQR
Trigger: CCGCTGCCTCTGCTTCTGCCAAGGTGGCCGACACTG...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCTGAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCCTTCAGTCTTCCCCTTaGGTCCACCCTACTCATAGC +
Preference number: 4 (lower is better)
Translates to: SELLSLEVLDPAQPSCLTLQSSP*VHPTHS
Trigger: GCTATGAGTAGGGTGGACCCAAGGGGAAGACTGAAG...GGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCATCCGGCTCCAAATATTaGGGTCCCAGTGACCGATGT +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHASGSKY*GPSDRC
Trigger: ACATCGGTCACTGGGACCTCAATATTTGGAGCCGGA...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGATTGGAATTTGAGGCCTaGATCCCAGGGTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRLEFEA*IPGFRS
Trigger: GGACCTGAACCCTGGGATTCAGGCCTCAAATTCCAA...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAATGGCCGCAATGCAGGTaGAGATGCCACCATCACCCG +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKWPQCR*RCHHHP
Trigger: CGGGTGATGGTGGCATCTTCACCTGCATTGCGGCCA...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CGCCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTGACCACACCTGGGGCTaGGCAAGGGTACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLSFPQFPECLCQPTPFSDHTWG*ARVPLL
Trigger: CAGAAGAGGTACCCTTGCTCAGCCCCAGGTGTGGTC...AGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAGGCCGGATCTCGGGGTaGTGGTCCCAGATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGGRISG*WSQIRV
Trigger: AACCCTGATCTGGGACCAGCACCCCGAGATCCGGCC...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGATTAAGCACTCAGGTCTaGAGCAAGGACTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRLSTQV*SKDFRP
Trigger: GGGCCTGAAGTCCTTGCTGCAGACCTGAGTGCTTAA...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGGTGAGGTCAGCCGGTTaGCATCCAGGTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLVRSAG*HPGAGH
Trigger: GTGCCCTGCACCTGGATGGCAACCGGCTGACCTCAC...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATAGGACTTTCTTGTTTTaGCCCGGTGTCCCCGACACC +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHRTFLF*PGVPDT
Trigger: GGTGTCGGGGACACCGGGGCAAAACAAGAAAGTCCT...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCTGTCCCTCTGCCTaGTGGTCCTGTTTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHPCPSA*WSCLVL
Trigger: CAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGG...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TGGAATCATCCCCCACAAGAAGCCGTCTTAACCCCAGCAGCGTCAGTTCCCATCCGGATCTCGGGGTGCTaGTCCCAGATCAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: WNHPPQEAVLTPAASVPIRISGC*SQIRVP
Trigger: TGGAACCCTGATCTGGGACCAGCACCCCGAGATCCG...GATGGGAACTGACGCTGCTGGGGTTAAGACGGCTTCTTGTGGGGGATGATTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp AGCTTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATGCCACATCCTGGACTCAGGTCCCCAAGAGTaGGTTCCAGGGTACAGTACT +
Preference number: 4 (lower is better)
Translates to: SFSLRPGVLHPPECHILDSGPQE*VPGYST
Trigger: AGTACTGTACCCTGGAACCCACTCTTGGGGACCTGA...GTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTCAGGCGGGAGAAGAGTaGGTCGGGTGGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSQAGEE*VGWDCG
Trigger: ACCACAATCCCACCCGACCCACTCTTCTCCCGCCTG...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTAGAGGCAGCGGAGGGTaGGGTGAGAGCATCAGGATC +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSRGSGG*GESIRI
Trigger: GATCCTGATGCTCTCACCCCACCCTCCGCTGCCTCT...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CAA 72 bp AGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATaGTCTGAATGGATCGCCATCCTCAGCCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RACSEPTRREHL*SEWIAILSLLR
Trigger: CCGGAGGAGGCTGAGGATGGCGATCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACCAGATCTTGGAATTTaGGGCCTGAATCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RAIWITTASPNPGHAQSRPDLGI*GLNPRV
Trigger: AACCCTGGGATTCAGGCCTCAAATTCCAAGATCTGG...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CGCCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTCTCCCTGGTCCTATATaGGGGCAGTCCCCACCATCT +
Preference number: 4 (lower is better)
Translates to: RLSFPQFPECLCQPTPFSLPGPI*GQSPPS
Trigger: AGATGGTGGGGACTGCCCTCATATAGGACCAGGGAG...AGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp CCTTGGGTCCACCCTACTCATAGCACTAGAAGGATCTTCCTGAAGCCCCAAACTGGCCGGATCTCGGGGTaGTGGTCCCAGATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PWVHPTHSTRRIFLKPQTGRISG*WSQIRV
Trigger: AACCCTGATCTGGGACCAGCACCCCGAGATCCGGCC...AGTTTGGGGCTTCAGGAAGATCCTTCTAGTGCTATGAGTAGGGTGGACCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGTTGACTTTAGGCCCCTaGGGGCAGGGCTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLLTLGP*GQGSGL
Trigger: TAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGGTGGGGCGAGGCCTaGGAGCGGAGGGACGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPGWGEA*ERRDGQ
Trigger: CTGACCGTCCCTCCGCTCCCAGGCCTCGCCCCACCC...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTTCAGGCTCCAGATCTTaGGGTTCCACGGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSSGSRS*GSTAGS
Trigger: AGATCCGGCCGTGGAACCCCAAGATCTGGAGCCTGA...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCAGTGCTGAGTCAAGATTaGGAGGTCTCAAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSVLSQD*EVSSPR
Trigger: TCTGGGGCTTGAGACCTCCCAATCTTGACTCAGCAC...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCATTTACGGGTCCAGTTTaGGTTGTTCAGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHAFTGPV*VVQGQG
Trigger: ACCCTGACCCTGAACAACCCAAACTGGACCCGTAAA...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGCCGCCCAGAGCAGGTaGGGACGCGCAGGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLAAQSR*GRAGLE
Trigger: CTCGAGGCCTGCGCGTCCCCACCTGCTCTGGGCGGC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGGGACAAGAGCAGCTGTaGCCCCGTGCTCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLGQEQL*PRAQSP
Trigger: AGGTGACTGAGCACGGGGCCACAGCTGCTCTTGTCC...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAGGACAAGAGCAGCTGTaGCCCCGTGCTCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGGQEQL*PRAQSP
Trigger: AGGTGACTGAGCACGGGGCCACAGCTGCTCTTGTCC...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAAAGGGCGCCGTTGGTCTaGGAGCAAACGCTGCTAACA +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKRAPLV*EQTLLT
Trigger: TGTTAGCAGCGTTTGCTCCCAGACCAACGGCGCCCT...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCAGCTGGACCACGGTGTaGGCCCTGAGCGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSSWTTV*ALSAAG
Trigger: GCCCGCGGCGCTCAGGGCCCACACCGTGGTCCAGCT...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCAAGGGTACCTCTTCTaGACTGTCACAATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHQGYLF*TVTIPQ
Trigger: CTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTG...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCTTGGAATTTGAGGCCTaGATCCCAGGGTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFLEFEA*IPGFRS
Trigger: GGACCTGAACCCTGGGATTCAGGCCTCAAATTCCAA...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGCAGCGGAGGGTGGGGTaGGAGCATCAGGATCCCCGT +
Preference number: 4 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRQRRVG*EHQDPR
Trigger: ACGGGGATCCTGATGCTCTCACCCCACCCTCCGCTG...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAACCGATCCCGGGGTTCTaGATTCAGATATTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKPIPGF*IQILGC
Trigger: GCACCCCAATATCTGAATGCAGAACCCCGGGATCGG...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCCGGTTGCCATCCAGGTaGAGGGCACGCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSRLPSR*RARRAR
Trigger: GCGGGCCCTGCGTGCCCTGCACCTGGATGGCAACCG...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCTTCTTGGGTCTGAATTaGTTGGTCTTCTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRAFLGLN*LVFFPL
Trigger: CAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAA...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCAGCTCCTTTCTCTGCCTaGAAGAGGGAAAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSAPFSA*KRENLC
Trigger: GCACAAGTTTTCCCTCTTGCAGGCAGAGAAAGGAGC...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588831.5
CDS-3UTR CCA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCAGACCCCTAAATATTaGGCCTCTAGGGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTQTPKY*ASRVQF
Trigger: AAACTGGACCCTAGAGGCCCAATATTTAGGGGTCTG...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CGCCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTCTCGGCTCAAATCTGTaGCAACGGAGTCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: RLSFPQFPECLCQPTPFSLGSNL*QRSLQT
Trigger: GGTCTGGAGACTCCGTTGCCACAGATTTGAGCCGAG...AGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CACAAGAGTTTCTTGGGTCTGAATTGCTTGGTCTTCTTCCCCCTGTCCCTCTGCCAGGCGGGAGAAGAGTaGGTCGGGTGGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: HKSFLGLNCLVFFPLSLCQAGEE*VGWDCG
Trigger: ACCACAATCCCACCCGACCCACTCTTCTCCCGCCTG...GCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGCCTAGCAGCCGGCCCTaGGGTGACACCCAACGCACA +
Preference number: 4 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRPSSRP*GDTQRT
Trigger: TGTGCGTTGGGTGTCACCCCAGGGCCGGCTGCTAGG...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTTGGGTCCACCCTACTCATAGCACTAGAAGGATCTTCCTGAAGCCCCAAACTAGAGGCAGCGGAGGGTaGGGTGAGAGCATCAGGATC +
Preference number: 4 (lower is better)
Translates to: PWVHPTHSTRRIFLKPQTRGSGG*GESIRI
Trigger: GATCCTGATGCTCTCACCCCACCCTCCGCTGCCTCT...AGTTTGGGGCTTCAGGAAGATCCTTCTAGTGCTATGAGTAGGGTGGACCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGCAGCGCAGGTTCGGTaGAGAAGCGGGCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQAAQVR*RSGRSP
Trigger: TGGGCTGCGCCCGCTTCTCCACCGAACCTGCGCTGC...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCACACTTGAGGCCAGTTTaGGATCAGCCTGGGCAATAT +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSHLRPV*DQPGQY
Trigger: ATATTGCCCAGGCTGATCCCAAACTGGCCTCAAGTG...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCAATATTGAGGTCCCAGTaGCCGATGTTGAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSILRSQ*PMLRFQ
Trigger: CTGGAATCTCAACATCGGTCACTGGGACCTCAATAT...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCAGATCTTGGAATTTaGGGCCTGAATCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFPDLGI*GLNPRV
Trigger: AACCCTGGGATTCAGGCCTCAAATTCCAAGATCTGG...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAAGAGGGACTGTGTCCTaGCTCGGCTCAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGRGTVS*LGSNLW
Trigger: CCACAGATTTGAGCCGAGTCAGGACACAGTCCCTCT...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCCTGGCCCTCGCCCAGTaGGGTCAGCCGGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSLALAQ*GQPVAI
Trigger: GATGGCAACCGGCTGACCTCACTGGGCGAGGGCCAG...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGCCCGGGATAGGCCGCTaGTCCGGCCACTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQPGIGR*SGHWTR
Trigger: TCTTGTCCAGTGGCCGGATCAGCGGCCTATCCCGGG...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp AGCTTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATGCCACATCCTGGACAGTTCCCATCTCTGCTaGCAAAGCCCTCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: SFSLRPGVLHPPECHILDSSHLC*QSPHFY
Trigger: ATAGAAATGAGGGCTTTGTCAGCAGAGATGGGAACT...GTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp AGCTTCAGCCTCAGACCAGGGGTCCTGCACCCTCCTGAATGCCACATCCTGGACAGAGTTTCTTGGGTCTaGATTGCTTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SFSLRPGVLHPPECHILDRVSWV*IAWSSS
Trigger: GGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCT...GTCCAGGATGTGGCATTCAGGAGGGTGCAGGACCCCTGGTCTGAGGCTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGGGCACGGCTTGAGTTaGCTAGCAGCCGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLGHGLS*LAAGPG
Trigger: CCCAGGGCCGGCTGCTAGGCAACTCAAGCCGTGCCC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGTTCCCCCTGTCCCTCTaGCTGCTGGTCCTGTTTAGT +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLFPLSL*LLVLFS
Trigger: ACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGAA...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCAAGGCTCCTTTCTCTaGCTGCAAGAGGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHQGSFL*LQEGKL
Trigger: AAGTTTTCCCTCTTGCAGGCAGAGAAAGGAGCCTTG...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588831.5
CDS-3UTR CCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCACTGTGTTCCAAATTGTaGGGTTCCGGCTCCAAATAT +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHALCSKL*GSGSKY
Trigger: ATATTTGGAGCCGGAACCCCACAATTTGGAACACAG...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCATCCAGGGTACAGTACTaGAAATCCAGTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: IWITTASPNPGHAQSRHASRVQY*KSSPRF
Trigger: AAATCTGGGACTGGATTTCCAGTACTGTACCCTGGA...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAATCAGGTCCCCAAGAGTaGGTTCCAGGGTACAGTACT +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKSGPQE*VPGYST
Trigger: AGTACTGTACCCTGGAACCCACTCTTGGGGACCTGA...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTTCCCAGGTCCAGTCTTaGGATGCTAAGCAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSSQVQS*DAKQPN
Trigger: GTTTGGCTGCTTAGCATCCCAAGACTGGACCTGGGA...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTTTCCCAAACTCTGGAGGGAGCATCTaGTCATGCTTTTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QGPLHLPSSPLAISSFPNSGGSI*SCFSCP
Trigger: GGGACAGGAAAAGCATGACCAGATGCTCCCTCCAGA...GTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCGGAGCAACGGGAGGATaGCCATCGCGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSGATGG*PSRAGV
Trigger: CACCCCTGCCCGCGATGGCCATCCTCCCGTTGCTCC...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGAGCAACGGGAGGATaGCCATCGCGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPGATGG*PSRAGV
Trigger: CACCCCTGCCCGCGATGGCCATCCTCCCGTTGCTCC...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTACCAGGCCGCGCAGCTaGCCCTCGCCCAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPTRPRS*PSPSEV
Trigger: GACCTCACTGGGCGAGGGCCAGCTGCGCGGCCTGGT...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGGCTCCACAGCAGCTGTaGCCTCGCCAGCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRAPQQL*PRQLHW
Trigger: CCAATGCAGCTGGCGAGGCCACAGCTGCTGTGGAGC...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGCCGTGCTCAGTCACCTaGACGCCACGGTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQPCSVT*TPRSVG
Trigger: CCCTACCGACCGTGGCGTCCAGGTGACTGAGCACGG...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGCAGCGCAGGTTCGGTaGAGAAGCGGGCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLAAQVR*RSGRSP
Trigger: TGGGCTGCGCCCGCTTCTCCACCGAACCTGCGCTGC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCGGCCCAGGGCGCCGTTaGTCTGGGAGCAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSGPGRR*SGSKRC
Trigger: GCAGCGTTTGCTCCCAGACCAACGGCGCCCTGGGCC...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTCAAGGGTACCTCTTCTaGACTGTCACAATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSQGYLF*TVTIPQ
Trigger: CTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTG...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
3UTR CAA 72 bp GTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTaGTTCCCTAGCCCAGCTGGTCCAACTTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSRVSLSTHSLF*FPSPAGPTSSS
Trigger: TGAGGACGAAGTTGGACCAGCTGGGCTAGGGAACAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCAGTTCAGCTCCAGGCTTaGGGTTTTAGATGTCAAATC +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSVQLQA*GFRCQI
Trigger: GATTTGACATCTAAAACCTCAAGCCTGGAGCTGAAC...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGAGGCCCAACGTGTTaGCGTTGCCCAGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPRGPTC*RCPGGP
Trigger: TGGGCCGCCTGGGCAACGTCAACACGTTGGGCCTCG...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAATTAGCAGCACGAAGATaGAGACCAGTACCGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKLAARR*RPVPRL
Trigger: TAGCCTCGGTACTGGTCTTCATCTTCGTGCTGCTAA...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGCTAGAAGGATCTTCCTaGAGCCCCAAACTGACCCCA +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLLEGSS*SPKLTP
Trigger: TGGGGTCAGTTTGGGGCTTCAGGAAGATCCTTCTAG...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCACAAATCTTGGGGTTCTaGTCCAAATATTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSQILGF*SKYWGL
Trigger: CAGACCCCAATATTTGGAGCAGAACCCCAAGATTTG...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCCACGAACAGGAGGCCTaGCCCTGGGCACAGCACGCT +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSHEQEA*PWAQHA
Trigger: AGCGTGCTGTGCCCAGGGGCAGGCCTCCTGTTCGTG...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTGCCGGCCGCCAGCGCTaGCAGCTGGTTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPAGRQR*QLVVAE
Trigger: CTCAGCAACAACCAGCTGGCAGCGCTGGCGGCCGGC...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGCAGCTGTGGCCCCGTaGTCAGTCACCTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLAAVAP*SVTWTP
Trigger: TGGCGTCCAGGTGACTGAGCACGGGGCCACAGCTGC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGGGCACACCACCACCTTaGTTGTGCTGTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRGTPPP*LCCALC
Trigger: GCAGAGGGCACAGCACAAGCAAGGTGGTGGTGTGCC...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCCGTGCTCAGTCACCTaGACGCCACGGTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLPCSVT*TPRSVG
Trigger: CCCTACCGACCGTGGCGTCCAGGTGACTGAGCACGG...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTGGCTCGCAGTCCAGCTaGACCACGGTGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPGSQSS*TTVWAL
Trigger: CAGGGCCCACACCGTGGTCCAGCTGGACTGCGAGCC...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGTCTTCGCCCAAGCTTaGAAAAATAGGACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRAVFAQA*KNRTFL
Trigger: CAAGAAAGTCCTATTTTTCCAAGCTTGGGCGAAGAC...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGTCTTGGTTAGGTTTTTCTTTAGAGGGACTGTGTCCTaGCTCGGCTCAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPCPSACWSCLVLVRFFFRGTVS*LGSNLW
Trigger: CCACAGATTTGAGCCGAGTCAGGACACAGTCCCTCT...AAAGAAAAACCTAACCAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCACAGCCAGAGGTGGTaGGCGGTGAGTCACCACGGG +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPHSQRW*AVSHHG
Trigger: CCCGTGGTGACTCACCGCTCACCACCTCTGGCTGTG...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGTGAGGTCAGCCGGTTaGCATCCAGGTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPVRSAG*HPGAGH
Trigger: GTGCCCTGCACCTGGATGGCAACCGGCTGACCTCAC...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCCCAACCCAGGGCATaGTCAGAGCCGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPPQPRA*SEPTRR
Trigger: CCTGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGG...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGGCACACCACCACCTTaGTTGTGCTGTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQGTPPP*LCCALC
Trigger: GCAGAGGGCACAGCACAAGCAAGGTGGTGGTGTGCC...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTGACGGTCAGACAGACTaGGACACGCGGGATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPDGQTD*DTRDGG
Trigger: GCCCCCATCCCGCGTGTCCCAGTCTGTCTGACCGTC...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGCGGATCTCGGGGTGCTaGTCCCAGATCAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQRISGC*SQIRVP
Trigger: TGGAACCCTGATCTGGGACCAGCACCCCGAGATCCG...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGTTTACGGGTCCAGTTTaGGTTGTTCAGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLFTGPV*VVQGQG
Trigger: ACCCTGACCCTGAACAACCCAAACTGGACCCGTAAA...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGCCACGTGGCGGATaGTGTTCCGCGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLQPRGG*CSATGS
Trigger: TGAGCCTGTCGCGGAACACCATCCGCCACGTGGCTG...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCCAGTGTCGGCCACCTTaGCAGAAGCAGAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSQCRPP*QKQRQR
Trigger: CCGCTGCCTCTGCTTCTGCCAAGGTGGCCGACACTG...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCATGCCCCAGCTTCCCCTaGGGCTCCCAGCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPCPSFP*GSQLQS
Trigger: AGACTGAAGCTGGGAGCCCCAGGGGAAGCTGGGGCA...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp CCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTGATATTGAGGTCCCAGTaGCCGATGTTGAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: PQLPTVSRVSLSTHSLFLILRSQ*PMLRFQ
Trigger: CTGGAATCTCAACATCGGTCACTGGGACCTCAATAT...CAAGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp TCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGTCTTGGTTAGGTTTTTCTTTTCCGGCTCCAAATATTaGGGTCCCAGTGACCGATGT +
Preference number: 4 (lower is better)
Translates to: SPCPSACWSCLVLVRFFFSGSKY*GPSDRC
Trigger: ACATCGGTCACTGGGACCTCAATATTTGGAGCCGGA...AAAGAAAAACCTAACCAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAAGTTCAGCTCCAGGCTTaGGGTTTTAGATGTCAAATC +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKVQLQA*GFRCQI
Trigger: GATTTGACATCTAAAACCTCAAGCCTGGAGCTGAAC...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGGGGGTCACAGCTGGTaGTGTTGGCTAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLGGHSW*CWLAEE
Trigger: CTCCTCAGCTAGCCAACAGCACCAGCTGTGACCCCC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCATTTCCTTCTGCTCTTTaGCCAGTTATCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSFPSAL*PVISFI
Trigger: TATGAAGGAGATAACTGGGCAAAGAGCAGAAGGAAA...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTGGGTCCTGCTGTCCGTaGGGCCAGAGGACCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPGSCCP*GQRTLR
Trigger: TCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCC...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGCCCAGTGACCGATGTTaGGATTCCAGCCCCATATAC +
Preference number: 4 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRPSDRC*DSSPIY
Trigger: GTATATGGGGCTGGAATCTCAACATCGGTCACTGGG...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCCCTGAAGCCCCAAACTaGCCCCATTCCTCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSPEAPN*PHSSLA
Trigger: TGCAAGGGAGGAATGGGGTCAGTTTGGGGCTTCAGG...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTTTGACTTTAGGCCCCTaGGGGCAGGGCTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPLTLGP*GQGSGL
Trigger: TAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCAGGCTCCAGATCTTaGGGTTCCACGGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSSGSRS*GSTAGS
Trigger: AGATCCGGCCGTGGAACCCCAAGATCTGGAGCCTGA...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGGTGCTGAGTCAAGATTaGGAGGTCTCAAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRVLSQD*EVSSPR
Trigger: TCTGGGGCTTGAGACCTCCCAATCTTGACTCAGCAC...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAATCTGCATTCAGATATTaGGGTGCTGAGTCAAGATTG +
Preference number: 4 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKSAFRY*GAESRL
Trigger: CAATCTTGACTCAGCACCCCAATATCTGAATGCAGA...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCCAGAGGTCAGGGCTCTaGAGGGAGCATCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSQRSGL*REHLVM
Trigger: CATGACCAGATGCTCCCTCCAGAGCCCTGACCTCTG...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCGAAGCCAGCAGGTTGTaGTCGAGGCCCAACGTGTTG +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSEASRL*SRPNVL
Trigger: CAACACGTTGGGCCTCGACCACAACCTGCTGGCTTC...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGAAGAGTGGGTCGGGTaGGATTGTGGTCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPEEWVG*DCGQAV
Trigger: AACCGCCTGACCACAATCCCACCCGACCCACTCTTC...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGAAGAGTGGGTCGGGTaGGATTGTGGTCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLEEWVG*DCGQAV
Trigger: AACCGCCTGACCACAATCCCACCCGACCCACTCTTC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTGTGGGGTTTAGAGTCTaGGATCCGATCCCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPVGFRV*DPIPGF
Trigger: GAACCCCGGGATCGGATCTCAGACTCTAAACCCCAC...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp CCTTGGGTCCACCCTACTCATAGCACTAGAAGGATCTTCCTGAAGCCCCAAACTCAAATCTTGGGGTTCTaGTCCAAATATTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PWVHPTHSTRRIFLKPQTQILGF*SKYWGL
Trigger: CAGACCCCAATATTTGGAGCAGAACCCCAAGATTTG...AGTTTGGGGCTTCAGGAAGATCCTTCTAGTGCTATGAGTAGGGTGGACCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGGAGCATCTGGTCATaGTTTTCCTGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPGSIWS*FSCPQG
Trigger: GCCTTGGGGACAGGAAAAGCATGACCAGATGCTCCC...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGCATACAACCCTCCATaGCTCCCTGGTATCATCAGG +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQAYNPP*LPGIIR
Trigger: CCTGATGATACCAGGGAGCCATGGAGGGTTGTATGC...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCTGAATGCCACATCCTaGACATCCTCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPLNATS*TSSGPP
Trigger: AGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAG...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
3UTR CAA 72 bp TCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGTCTaGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATG +
Preference number: 4 (lower is better)
Translates to: SPCPSACWSCLV*VRFFFASPLNM
Trigger: CATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR TCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGCAGATATTGGGGTGCTaGGTCAAGATTGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQQILGC*VKIGRS
Trigger: AGACCTCCCAATCTTGACTCAGCACCCCAATATCTG...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGCCACAGTCCAGATCTTaGAATTTGAGGCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRPQSRS*NLRPES
Trigger: GGATTCAGGCCTCAAATTCCAAGATCTGGACTGTGG...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCCAGGTCCAGTCTTaGGATGCTAAGCAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSSQVQS*DAKQPN
Trigger: GTTTGGCTGCTTAGCATCCCAAGACTGGACCTGGGA...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCTGGAGGGAGCATCTaGTCATGCTTTTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSSGGSI*SCFSCP
Trigger: GGGACAGGAAAAGCATGACCAGATGCTCCCTCCAGA...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR TCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCACAGATATTGGGGTGCTaGGTCAAGATTGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPQILGC*VKIGRS
Trigger: AGACCTCCCAATCTTGACTCAGCACCCCAATATCTG...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCGGGAGCATCTGGTCATaGTTTTCCTGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLVLVRFFFASPLNMESPGSIWS*FSCPQG
Trigger: GCCTTGGGGACAGGAAAAGCATGACCAGATGCTCCC...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCACAGACCCCTAAATATTaGGCCTCTAGGGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPQTPKY*ASRVQF
Trigger: AAACTGGACCCTAGAGGCCCAATATTTAGGGGTCTG...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCTCCCTGGTCACTCTGTaGTATCACTGTCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: CLVLVRFFFASPLNMESPSLVTL*YHCLGM
Trigger: CATCCCCAGACAGTGATAGCACAGAGTGACCAGGGA...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGAAAGAGCTTTCCTTCTaGTCTTTGCCCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: CPVISFICHSQITCVLLQKELSF*SLPSYL
Trigger: GAGATAACTGGGCAAAGAGCAGAAGGAAAGCTCTTT...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTGATTCAATCTGGCCATaGCCAGCAATAGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPDSIWP*PAIGLI
Trigger: GATCAAGCCTATTGCTGGGCATGGCCAGATTGAATC...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588831.5
CDS-3UTR CCA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCTCCAGCCCCATATACTaGGGTTCAGGCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: CLVLVRFFFASPLNMESPSSPIY*GSGSRS
Trigger: AGATCTGGAGCCTGAACCCCAGTATATGGGGCTGGA...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCACTGTGTTCCAAATTGTaGGGTTCCGGCTCCAAATAT +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPLCSKL*GSGSKY
Trigger: ATATTTGGAGCCGGAACCCCACAATTTGGAACACAG...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCTGCATTCAGATATTaGGGTGCTGAGTCAAGATTG +
Preference number: 4 (lower is better)
Translates to: LFAQLSPSYVILRSHVSSSAFRY*GAESRL
Trigger: CAATCTTGACTCAGCACCCCAATATCTGAATGCAGA...GGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCGTCTTCGCCCAAGCTTaGAAAAATAGGACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LCPVISFICHSQITCVLLVFAQA*KNRTFL
Trigger: CAAGAAAGTCCTATTTTTCCAAGCTTGGGCGAAGAC...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR GCA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCATTTCCTTCTGCTCTTTaGCCAGTTATCTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPFPSAL*PVISFI
Trigger: TATGAAGGAGATAACTGGGCAAAGAGCAGAAGGAAA...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CCA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCCCACAGTCCAGATCTTaGAATTTGAGGCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: CLVLVRFFFASPLNMESPPQSRS*NLRPES
Trigger: GGATTCAGGCCTCAAATTCCAAGATCTGGACTGTGG...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR GCA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCAAAGAGCTTTCCTTCTaGTCTTTGCCCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: CLVLVRFFFASPLNMESPKELSF*SLPSYL
Trigger: GAGATAACTGGGCAAAGAGCAGAAGGAAAGCTCTTT...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS CCA 90 bp GCGGGCGGGGCGGGCGTGGGCGTGGGGCCCAGGGCGCCGTTGGTCTaGGAGCAAACGCTGCTAACAGGCGCGGGAATCTTGGCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: AGGAGVGVGPRAPLV*EQTLLTGAGILALP
Trigger: CGGCAAGGCCAAGATTCCCGCGCCTGTTAGCAGCGTTTGCTCCCAGACCAACGGCGCCCTGGGCCCCACGCCCACGCCCGCCCCGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 90 bp GATGATCATCGTGCCGCCCAGGAAGGGAGCGTGCGGCGCCCCGCATaGCCGCAGCGCAGGTTCGGTGGAGAAGCGGGCGCAGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: DDHRAAQEGSVRRPA*PQRRFGGEAGAAHR
Trigger: CCTGTGGGCTGCGCCCGCTTCTCCACCGAACCTGCGCTGCGGCCATGCGGGGCGCCGCACGCTCCCTTCCTGGGCGGCACGATGATCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp GGTCCCACAGGGTGTCCGGGTCCTGCTGTCCGTGGGGCCAGAGGACCCTTAGAGCCCAACGTGTTGACGTaGCCCAGGCGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GPTGCPGPAVRGARGPLEPNVLT*PRRPRA
Trigger: GGCCCTGGGCCGCCTGGGCAACGTCAACACGTTGGG...CTCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCCGGACACCCTGTGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp GGTCCCACAGGGTGTCCGGGTCCTGCTGTCCGTGGGGCCAGAGGACCCTTAGAGAGCTCCAGCGTCCCATaGGGGAAGGCGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: GPTGCPGPAVRGARGPLESSSVP*GKARAR
Trigger: CCGTGCCCGCGCCTTCCCCAATGGGACGCTGGAGCT...CTCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCCGGACACCCTGTGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 90 bp TCCGGCCACTGGACAAGAGCAGCTGTGGCCCCGTGCTCAGTCACCTaGACGCCACGGTCGGTAGGGGGCCCAGTGTCGGCCACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SGHWTRAAVAPCSVT*TPRSVGGPVSATLA
Trigger: TGCCAAGGTGGCCGACACTGGGCCCCCTACCGACCGTGGCGTCCAGGTGACTGAGCACGGGGCCACAGCTGCTCTTGTCCAGTGGCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 90 bp GCTGTCCTCATACACGGCGAGCACGCACAGATCGTAGGTCCGGCCTaGCGCCAGGTCCGTCAGCAGGAACGAGCGGCTCTCCGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: AVLIHGEHAQIVGPA*RQVRQQERAALRRD
Trigger: ATCCCGGCGGAGAGCCGCTCGTTCCTGCTGACGGACCTGGCGTCAGGCCGGACCTACGATCTGTGCGTGCTCGCCGTGTATGAGGACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCCCCAACGTGTTGACGTaGCCCAGGCGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRAPNVLT*PRRPRA
Trigger: GGCCCTGGGCCGCCTGGGCAACGTCAACACGTTGGG...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACGGGCACGGCTTGAGTaGCCTAGCAGCCGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RAIWITTASPNPGHAQSRRARLE*PSSRPW
Trigger: CCAGGGCCGGCTGCTAGGCAACTCAAGCCGTGCCCG...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGAAGCTCCAGCGTCCCATaGGGGAAGGCGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: RAIWITTASPNPGHAQSRSSSVP*GKARAR
Trigger: CCGTGCCCGCGCCTTCCCCAATGGGACGCTGGAGCT...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGGGGCCCAGGGCGCCGTaGGTCTGGGAGCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTGPRAP*VWEQTL
Trigger: CAGCGTTTGCTCCCAGACCAACGGCGCCCTGGGCCC...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCAAGTGAGGTCAGCCGGTaGCCATCCAGGTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPSEVSR*PSRCRA
Trigger: TGCCCTGCACCTGGATGGCAACCGGCTGACCTCACT...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCATGAGGTGGCGCAAGTaGACCAGGCCGCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCAMRWRK*TRPRSW
Trigger: CCAGCTGCGCGGCCTGGTCAACTTGCGCCACCTCAT...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp ATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCATCGAGGCCCAACGTGTaGACGTTGCCCAGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: IWITTASPNPGHAQSRHASRPNV*TLPRRP
Trigger: GGGCCGCCTGGGCAACGTCAACACGTTGGGCCTCGA...TGCGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TCTGAGCTCCTCAGCCTGGAGGTCCTAGACCCTGCTCAACCCTCCTGCCTCACCTCCAGCCGGGCCAGCTaGTGCAGGCGGGAAAAAGCG +
Preference number: 5 (lower is better)
Translates to: SELLSLEVLDPAQPSCLTSSRAS*CRREKA
Trigger: CGCTTTTTCCCGCCTGCACAAGCTGGCCCGGCTGGA...GGTGAGGCAGGAGGGTTGAGCAGGGTCTAGGACCTCCAGGCTGAGGAGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS GCA 90 bp GGGTTCAGGCTCCAGATCTTGGGGTTCCACGGCCGGATCTCGGGGTaGTGGTCCCAGATCAGGGTTCCAGGCTCGGGTTTCCGGAATTCC +
Preference number: 5 (lower is better)
Translates to: GFRLQILGFHGRISG*WSQIRVPGSGFRNS
Trigger: GGAATTCCGGAAACCCGAGCCTGGAACCCTGATCTGGGACCAGCACCCCGAGATCCGGCCGTGGAACCCCAAGATCTGGAGCCTGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246529.4
ENST00000587257.1
ENST00000588831.5
CDS-3UTR CAA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGATCCAGCCGGGCCAGCTaGTGCAGGCGGGAAAAAGCG +
Preference number: 5 (lower is better)
Translates to: RAIWITTASPNPGHAQSRSSRAS*CRREKA
Trigger: CGCTTTTTCCCGCCTGCACAAGCTGGCCCGGCTGGA...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACCAGTGTCGGCCACCTaGGCAGAAGCAGAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: RAIWITTASPNPGHAQSRPVSAT*AEAEAA
Trigger: CGCTGCCTCTGCTTCTGCCAAGGTGGCCGACACTGG...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCGGGCCCAGGGCGCCGTaGGTCTGGGAGCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFGPRAP*VWEQTL
Trigger: CAGCGTTTGCTCCCAGACCAACGGCGCCCTGGGCCC...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS CCA 90 bp TTCAGGCTCCAGATCTTGGGGTTCCACGGCCGGATCTCGGGGTGCTaGTCCCAGATCAGGGTTCCAGGCTCGGGTTTCCGGAATTCCCGA +
Preference number: 5 (lower is better)
Translates to: FRLQILGFHGRISGC*SQIRVPGSGFRNSR
Trigger: TCGGGAATTCCGGAAACCCGAGCCTGGAACCCTGATCTGGGACCAGCACCCCGAGATCCGGCCGTGGAACCCCAAGATCTGGAGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246529.4
ENST00000587257.1
ENST00000588831.5
CDS-3UTR CAA 90 bp CAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTTTCCCAAACCGGGCACGGCTTGAGTaGCCTAGCAGCCGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: QGPLHLPSSPLAISSFPNRARLE*PSSRPW
Trigger: CCAGGGCCGGCTGCTAGGCAACTCAAGCCGTGCCCG...GTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGTTCAGGCTCCAGATCTaGGGGTTCCACGGCCGGATC +
Preference number: 5 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTFRLQI*GFHGRI
Trigger: GATCCGGCCGTGGAACCCCAAGATCTGGAGCCTGAA...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TACCATAGCACCCCCAGTGCCCAGGGCACACCACCACCTTGCTTGTGCTGTGCCTCGGGTTCAGGCCCCTaGGAATCCCACAGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: YHSTPSAQGTPPPCLCCASGSGP*ESHSPD
Trigger: ATCTGGACTGTGGGATTCCAAGGGGCCTGAACCCGA...GGCACAGCACAAGCAAGGTGGTGGTGTGCCCTGGGCACTGGGGGTGCTATGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAAGCAGGCCTGTCATGTaGGCCAGGTCGCGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGSRPVM*ARSRRR
Trigger: GCGCCGCCGCGACCTGGCCAACATGACAGGCCTGCT...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGACACCACCACCTTGCTaGTGCTGTGCCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTTPPPC*CCALCL
Trigger: CAGGCAGAGGGCACAGCACAAGCAAGGTGGTGGTGT...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCATGCCCAGCAATAGGCTaGATCTTTCAGGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPCPAIG*IFQARG
Trigger: CCCTCTGGCCTGAAAGATCAAGCCTATTGCTGGGCA...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588831.5
CDS-3UTR CAA 90 bp TCAGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCAGCGATTTGGTGAGTTaGAGGCCAGGTCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: SGLSGSPQHPPTQGMLRASDLVS*RPGPTG
Trigger: CCCTGTGGGACCTGGCCTCAAACTCACCAAATCGCT...GGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCATCGGGTTCAGGCCCCTaGGAATCCCACAGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSSGSGP*ESHSPD
Trigger: ATCTGGACTGTGGGATTCCAAGGGGCCTGAACCCGA...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TTGACTTTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATGGTGCTGAGTCAAGATaGGGAGGTCTCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LTLGPCGQGSGLSGSPQHGAESR*GGLKPQ
Trigger: CTGGGGCTTGAGACCTCCCAATCTTGACTCAGCACC...ATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAAAGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCGGGTCCAGTTTGGGTaGTTCAGGGTCAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFRVQFG*FRVRVS
Trigger: GGAGACCCTGACCCTGAACAACCCAAACTGGACCCG...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp CACAAGAGTTTCTTGGGTCTGAATTGCTTGGTCTTCTTCCCCCTGTCCCTCTGCTCGAGGCCCAACGTGTaGACGTTGCCCAGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: HKSFLGLNCLVFFPLSLCSRPNV*TLPRRP
Trigger: GGGCCGCCTGGGCAACGTCAACACGTTGGGCCTCGA...GCAGAGGGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAACTCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAGTGGGTCGGGTGGGATaGTGGTCAGGCGGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGVGRVG*WSGGWR
Trigger: CCTCCAACCGCCTGACCACAATCCCACCCGACCCAC...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp GGACATCCTCAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTGGTGCTGAGTCAAGATaGGGAGGTCTCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GHPQGPLHLPSSPLAISSGAESR*GGLKPQ
Trigger: CTGGGGCTTGAGACCTCCCAATCTTGACTCAGCACC...AGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAACGGGTCCAGTTTGGGTaGTTCAGGGTCAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKRVQFG*FRVRVS
Trigger: GGAGACCCTGACCCTGAACAACCCAAACTGGACCCG...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAAGTGAGGTCAGCCGGTaGCCATCCAGGTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGSEVSR*PSRCRA
Trigger: TGCCCTGCACCTGGATGGCAACCGGCTGACCTCACT...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp GCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGAGGCGCGGGCACGGCTaGAGTTGCCTAGCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: AQLSPSYVILRSHVSSSRRRGHG*SCLAAG
Trigger: GCCGGCTGCTAGGCAACTCAAGCCGTGCCCGCGCCT...CCTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TTAGGCCCCTGCGGGCAGGGCTCAGGGCTATCTGGATCACCACAGCATCCCCCAAAAACCATGAGCGATTaGGTGAGTTTGAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LGPCGQGSGLSGSPQHPPKTMSD*VSLRPG
Trigger: ACCTGGCCTCAAACTCACCAAATCGCTCATGGTTTT...TGGGGGATGCTGTGGTGATCCAGATAGCCCTGAGCCCTGCCCGCAGGGGCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 90 bp CAGGCCCCTTGGAATCCCACAGTCCAGATCTTGGAATTTGAGGCCTaGATCCCAGGGTTCAGGTCCCCAAGAGTGGGTTCCAGGGTACAG +
Preference number: 5 (lower is better)
Translates to: QAPWNPTVQILEFEA*IPGFRSPRVGSRVQ
Trigger: CTGTACCCTGGAACCCACTCTTGGGGACCTGAACCCTGGGATTCAGGCCTCAAATTCCAAGATCTGGACTGTGGGATTCCAAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 90 bp CCCAAACTCGGGTTCAGGCCCCTTGGAATCCCACAGTCCAGATCTTaGAATTTGAGGCCTGAATCCCAGGGTTCAGGTCCCCAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: PKLGFRPLGIPQSRS*NLRPESQGSGPQEW
Trigger: CCACTCTTGGGGACCTGAACCCTGGGATTCAGGCCTCAAATTCCAAGATCTGGACTGTGGGATTCCAAGGGGCCTGAACCCGAGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGATTCAGGCTCCAGATCTaGGGGTTCCACGGCCGGATC +
Preference number: 5 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGFRLQI*GFHGRI
Trigger: GATCCGGCCGTGGAACCCCAAGATCTGGAGCCTGAA...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAACAGAAGCCAGCAGGTaGTGGTCGAGGCCCAACGTG +
Preference number: 5 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGTEASR*WSRPNV
Trigger: CACGTTGGGCCTCGACCACAACCTGCTGGCTTCTGT...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AGGGCTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGATCATCAGCCGAGCTGTaGTACTGGATCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: RAIWITTASPNPGHAQSRSSAEL*YWIWYM
Trigger: CATGTACCAGATCCAGTACAACAGCTCGGCTGATGA...TCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 90 bp CCCCTAAATATTGGGCCTCTAGGGTCCAGTTTTACGGGTCCAGTTTaGGTTGTTCAGGGTCAGGGTCTCCCAGGTCCAGTCTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: PLNIGPLGSSFTGPV*VVQGQGLPGPVLGC
Trigger: GCATCCCAAGACTGGACCTGGGAGACCCTGACCCTGAACAACCCAAACTGGACCCGTAAAACTGGACCCTAGAGGCCCAATATTTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCGGTCTGTGTTCCAAATaGTGGGGTTCCGGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFGLCSK*WGSGSK
Trigger: TTTGGAGCCGGAACCCCACAATTTGGAACACAGACC...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp GGTCCCACAGGGTGTCCGGGTCCTGCTGTCCGTGGGGCCAGAGGACCCTTAGAGTTTAGATGTCAAATCTaGGGGTTCTGCTCCAAATAT +
Preference number: 5 (lower is better)
Translates to: GPTGCPGPAVRGARGPLEFRCQI*GFCSKY
Trigger: ATATTTGGAGCAGAACCCCAAGATTTGACATCTAAA...CTCTAAGGGTCCTCTGGCCCCACGGACAGCAGGACCCGGACACCCTGTGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS GCA 90 bp TCTTTCAGGCCAGAGGGGCTCCTTCCCAAGGCTCCTTTCTCTGCCTaGAAGAGGGAAAACTTGTGCCATCTGGGATTAGGGAAAGACCTC +
Preference number: 5 (lower is better)
Translates to: SFRPEGLLPKAPFSA*KRENLCHLGLGKDL
Trigger: GAGGTCTTTCCCTAATCCCAGATGGCACAAGTTTTCCCTCTTGCAGGCAGAGAAAGGAGCCTTGGGAAGGAGCCCCTCTGGCCTGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585876.1
ENST00000588831.5
CDS CCA 90 bp ATCCCAGGGTTCAGGTCCCCAAGAGTGGGTTCCAGGGTACAGTACTaGAAATCCAGTCCCAGATTTCAAGGTCCCAGGCCCAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: IPGFRSPRVGSRVQY*KSSPRFQGPRPRIQ
Trigger: CTGAATTCTGGGCCTGGGACCTTGAAATCTGGGACTGGATTTCCAGTACTGTACCCTGGAACCCACTCTTGGGGACCTGAACCCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAATTTTACGGGTCCAGTTaGGGTTGTTCAGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKFYGSS*GCSGSG
Trigger: CCCTGACCCTGAACAACCCAAACTGGACCCGTAAAA...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTAGCAGGCCTGTCATGTaGGCCAGGTCGCGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPSRPVM*ARSRRR
Trigger: GCGCCGCCGCGACCTGGCCAACATGACAGGCCTGCT...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGGTGGGTCGGGTGGGATaGTGGTCAGGCGGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: CPVISFICHSQITCVLLQVGRVG*WSGGWR
Trigger: CCTCCAACCGCCTGACCACAATCCCACCCGACCCAC...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTATCTGGATCACCACAGCATCCCCCAACCCAGGGCATGCTCAGAGCCGACACGCTTTCCTTCTGCTCTTaGCCCAGTTATCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LSGSPQHPPTQGMLRADTLSFCS*PSYLLH
Trigger: ATGAAGGAGATAACTGGGCAAAGAGCAGAAGGAAAG...CGTGTCGGCTCTGAGCATGCCCTGGGTTGGGGGATGCTGTGGTGATCCAGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TGGAATCATCCCCCACAAGAAGCCGTCTTAACCCCAGCAGCGTCAGTTCCCATCTCCCATAGTGGGGACTaGGAATCATCCCCCACAAGA +
Preference number: 5 (lower is better)
Translates to: WNHPPQEAVLTPAASVPISHSGD*ESSPTR
Trigger: TCTTGTGGGGGATGATTCCAAGTCCCCACTATGGGA...GATGGGAACTGACGCTGCTGGGGTTAAGACGGCTTCTTGTGGGGGATGATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp CCTCATCCCCACATCCCTGGTCACTCTGTGCTATCACTGTCTGGGGATGTGTCTTTGGGTCTGAATTGCTaGGTCTTCTTCCCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: PHPHIPGHSVLSLSGDVSLGLNC*VFFPLS
Trigger: GGACAGGGGGAAGAAGACCAAGCAATTCAGACCCAA...AGACACATCCCCAGACAGTGATAGCACAGAGTGACCAGGGATGTGGGGATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCACCAGTGTCGGCCACCTaGGCAGAAGCAGAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPPVSAT*AEAEAA
Trigger: CGCTGCCTCTGCTTCTGCCAAGGTGGCCGACACTGG...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp GGGCTGAGCAAGGGTACCTCTTCTGGACTGTCACAATCCCCCAGGCTTCCCTCAGAACACAAGAGTTTCTaGGGTCTGAATTGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GLSKGTSSGLSQSPRLPSEHKSF*GLNCLV
Trigger: GACCAAGCAATTCAGACCCAAGAAACTCTTGTGTTC...TGAGGGAAGCCTGGGGGATTGTGACAGTCCAGAAGAGGTACCCTTGCTCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS GCA 90 bp TTGATCTTTCAGGCCAGAGGGGCTCCTTCCCAAGGCTCCTTTCTCTaGCTGCAAGAGGGAAAACTTGTGCCATCTGGGATTAGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: LIFQARGAPSQGSFL*LQEGKLVPSGIRER
Trigger: TCTTTCCCTAATCCCAGATGGCACAAGTTTTCCCTCTTGCAGGCAGAGAAAGGAGCCTTGGGAAGGAGCCCCTCTGGCCTGAAAGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585876.1
ENST00000588831.5
CDS-3UTR CAA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTATGAGGTGGCGCAAGTaGACCAGGCCGCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPMRWRK*TRPRSW
Trigger: CCAGCTGCGCGGCCTGGTCAACTTGCGCCACCTCAT...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CCAACCCCCATAGACAGAGACGAGGGCAAGGGTCTTCGCCCAAGCTTGGAAAAAAAAACCATGAGCGATTaGGTGAGTTTGAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: PTPIDRDEGKGLRPSLEKKTMSD*VSLRPG
Trigger: ACCTGGCCTCAAACTCACCAAATCGCTCATGGTTTT...TTTTTCCAAGCTTGGGCGAAGACCCTTGCCCTCGTCTCTGTCTATGGGGGTTGG
52% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TCCCCCTGTCCCTCTGCCTGCTGGTCCTGTTTAGTCTTGGTTAGGTTTTTCTTTACCCACTCCCTTTTCTaGTTCCCTAGCCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SPCPSACWSCLVLVRFFFTHSLF*FPSPAG
Trigger: ACCAGCTGGGCTAGGGAACAAGAAAAGGGAGTGGGT...AAAGAAAAACCTAACCAAGACTAAACAGGACCAGCAGGCAGAGGGACAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp CGCCTCAGCTTCCCACAGTTTCCCGAGTGTCTCTGTCAACCCACTCCCTTTTCTTTTCTTGGGTCTGAATaGCTTGGTCTTCTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: RLSFPQFPECLCQPTPFSFLGSE*LGLLPP
Trigger: AGGGGGAAGAAGACCAAGCAATTCAGACCCAAGAAA...AGAAAAGGGAGTGGGTTGACAGAGACACTCGGGAAACTGTGGGAAGCTGAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS CCA 90 bp TCTTGGAATTTGAGGCCTGAATCCCAGGGTTCAGGTCCCCAAGAGTaGGTTCCAGGGTACAGTACTGGAAATCCAGTCCCAGATTTCAAG +
Preference number: 5 (lower is better)
Translates to: SWNLRPESQGSGPQE*VPGYSTGNPVPDFK
Trigger: CTTGAAATCTGGGACTGGATTTCCAGTACTGTACCCTGGAACCCACTCTTGGGGACCTGAACCCTGGGATTCAGGCCTCAAATTCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAACAGAAGCCAGCAGGTaGTGGTCGAGGCCCAACGTG +
Preference number: 5 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPTEASR*WSRPNV
Trigger: CACGTTGGGCCTCGACCACAACCTGCTGGCTTCTGT...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTCCTGAATGCCACATCCTGGACATCCTCAGGGCCCCCTACACCTACCAAGTTCTGGTCCTGTTTAGTCTaGGTTAGGTTTTTCTTTGCG +
Preference number: 5 (lower is better)
Translates to: LLNATSWTSSGPPTPTKFWSCLV*VRFFFA
Trigger: CGCAAAGAAAAACCTAACCAAGACTAAACAGGACCA...GAACTTGGTAGGTGTAGGGGGCCCTGAGGATGTCCAGGATGTGGCATTCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp TTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAAGCGATTTGGTGAGTTaGAGGCCAGGTCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: LPSYLLHMSFSDHMCPPPSDLVS*RPGPTG
Trigger: CCCTGTGGGACCTGGCCTCAAACTCACCAAATCGCT...TGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTACACCACCACCTTGCTaGTGCTGTGCCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPTPPPC*CCALCL
Trigger: CAGGCAGAGGGCACAGCACAAGCAAGGTGGTGGTGT...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp AACCCAGGGCATGCTCAGAGCCGACACGCAGGGAACATCTATTGTCTGAATGGAGTTCTGCTCCAAATATaGGGGTCTGTGTTCCAAATT +
Preference number: 5 (lower is better)
Translates to: NPGHAQSRHAGNIYCLNGVLLQI*GSVFQI
Trigger: AATTTGGAACACAGACCCCAATATTTGGAGCAGAAC...TCCATTCAGACAATAGATGTTCCCTGCGTGTCGGCTCTGAGCATGCCCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CAGGGCCCCCTACACCTACCAAGTTCCCCACTGGCCATATCATCTTTCCCAAACTTTAGATGTCAAATCTaGGGGTTCTGCTCCAAATAT +
Preference number: 5 (lower is better)
Translates to: QGPLHLPSSPLAISSFPNFRCQI*GFCSKY
Trigger: ATATTTGGAGCAGAACCCCAAGATTTGACATCTAAA...GTTTGGGAAAGATGATATGGCCAGTGGGGAACTTGGTAGGTGTAGGGGGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCTTTTACGGGTCCAGTTaGGGTTGTTCAGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LCPVISFICHSQITCVLLFYGSS*GCSGSG
Trigger: CCCTGACCCTGAACAACCCAAACTGGACCCGTAAAA...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTGGTCTGTGTTCCAAATaGTGGGGTTCCGGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPGLCSK*WGSGSK
Trigger: TTTGGAGCCGGAACCCCACAATTTGGAACACAGACC...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp CTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCTCATCAGCCGAGCTGTaGTACTGGATCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: LCPVISFICHSQITCVLLSSAEL*YWIWYM
Trigger: CATGTACCAGATCCAGTACAACAGCTCGGCTGATGA...GAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTCCAGCTTTCCTTCTGCTCTTaGCCCAGTTATCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: CPVISFICHSQITCVLLQLSFCS*PSYLLH
Trigger: ATGAAGGAGATAACTGGGCAAAGAGCAGAAGGAAAG...CTGGAGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS-3UTR CAA 90 bp TGTTTAGTCTTGGTTAGGTTTTTCTTTGCGTCACCCTTAAATATGGAAAGTCCCAGACGGGAGGATCACTaGAGGCCAGTTTGGGATCAG +
Preference number: 5 (lower is better)
Translates to: CLVLVRFFFASPLNMESPRREDH*RPVWDQ
Trigger: CTGATCCCAAACTGGCCTCAAGTGATCCTCCCGTCT...GGGACTTTCCATATTTAAGGGTGACGCAAAGAAAAACCTAACCAAGACTAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246529.4
CDS-3UTR CAA 90 bp TCTTTGCCCAGTTATCTCCTTCATATGTCATTCTCAGATCACATGTGTCCTCCTTGCAAGAGGGAAAACTaGTGCCATCTGGGATTAGGG +
Preference number: 5 (lower is better)
Translates to: SLPSYLLHMSFSDHMCPPCKREN*CHLGLG
Trigger: CCCTAATCCCAGATGGCACAAGTTTTCCCTCTTGCA...AGGAGGACACATGTGATCTGAGAATGACATATGAAGGAGATAACTGGGCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588831.5
CDS CCA 72 bp CGTGCGGCGCCCCGCATGGCCGCAGCGCAGGTTCGGTaGAGAAGCGGGCGCAGCCCACAGGCCGCGTGGCCG +
Preference number: 6 (lower is better)
Translates to: RAAPRMAAAQVR*RSGRSPQAAWP
Trigger: CGGCCACGCGGCCTGTGGGCTGCGCCCGCTTCTCCACCGAACCTGCGCTGCGGCCATGCGGGGCGCCGCACG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 72 bp TGGAGAAGCGGGCGCAGCCCACAGGCCGCGTGGCCGTaGGCCCCGTGGCGCTGTCCTCATACACGGCGAGCA +
Preference number: 6 (lower is better)
Translates to: WRSGRSPQAAWP*APWRCPHTRRA
Trigger: TGCTCGCCGTGTATGAGGACAGCGCCACGGGGCTCACGGCCACGCGGCCTGTGGGCTGCGCCCGCTTCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 72 bp GCGCGGGCACGGCTTGAGTTGCCTAGCAGCCGGCCCTaGGGTGACACCCAACGCACACGGGGCTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: ARARLELPSSRP*GDTQRTRGSGS
Trigger: GGACCCAGAGCCCCGTGTGCGTTGGGTGTCACCCCAGGGCCGGCTGCTAGGCAACTCAAGCCGTGCCCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CAA 90 bp ATGCCACCATCACCCGGCTCGGTGACCAGCAGCTCCAGCGTCCCATaGGGGAAGGCGCGGGCACGGCTTGAGTTGCCTAGCAGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: MPPSPGSVTSSSSVP*GKARARLELPSSRP
Trigger: GGGCCGGCTGCTAGGCAACTCAAGCCGTGCCCGCGCCTTCCCCAATGGGACGCTGGAGCTGCTGGTCACCGAGCCGGGTGATGGTGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 72 bp GGCCGACCTGCGGGCACAGCCAGAGGTGGTGAGCGGTaGGTCACCACGGGCGGCTCGCAGACAAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: GRPAGTARGGER*VTTGGSQTNSS
Trigger: GGAGGAGTTTGTCTGCGAGCCGCCCGTGGTGACTCACCGCTCACCACCTCTGGCTGTGCCCGCAGGTCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS GCA 72 bp GCGTCCCATTGGGGAAGGCGCGGGCACGGCTTGAGTTaGCTAGCAGCCGGCCCTGGGGTGACACCCAACGCA +
Preference number: 6 (lower is better)
Translates to: ASHWGRRGHGLS*LAAGPGVTPNA
Trigger: TGCGTTGGGTGTCACCCCAGGGCCGGCTGCTAGGCAACTCAAGCCGTGCCCGCGCCTTCCCCAATGGGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 72 bp TGGACAAGAGCAGCTGTGGCCCCGTGCTCAGTCACCTaGACGCCACGGTCGGTAGGGGGCCCAGTGTCGGCC +
Preference number: 6 (lower is better)
Translates to: WTRAAVAPCSVT*TPRSVGGPVSA
Trigger: GGCCGACACTGGGCCCCCTACCGACCGTGGCGTCCAGGTGACTGAGCACGGGGCCACAGCTGCTCTTGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CAA 72 bp AGCGTCCCATTGGGGAAGGCGCGGGCACGGCTTGAGTaGCCTAGCAGCCGGCCCTGGGGTGACACCCAACGC +
Preference number: 6 (lower is better)
Translates to: SVPLGKARARLE*PSSRPWGDTQR
Trigger: GCGTTGGGTGTCACCCCAGGGCCGGCTGCTAGGCAACTCAAGCCGTGCCCGCGCCTTCCCCAATGGGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CAA 72 bp TCACCCGGCTCGGTGACCAGCAGCTCCAGCGTCCCATaGGGGAAGGCGCGGGCACGGCTTGAGTTGCCTAGC +
Preference number: 6 (lower is better)
Translates to: SPGSVTSSSSVP*GKARARLELPS
Trigger: GCTAGGCAACTCAAGCCGTGCCCGCGCCTTCCCCAATGGGACGCTGGAGCTGCTGGTCACCGAGCCGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CAA 90 bp TTGTGCAGGCGGGAAAAAGCGCCGGCGGGCACAGAAGCCAGCAGGTaGTGGTCGAGGCCCAACGTGTTGACGTTGCCCAGGCGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LCRREKAPAGTEASR*WSRPNVLTLPRRPR
Trigger: CCTGGGCCGCCTGGGCAACGTCAACACGTTGGGCCTCGACCACAACCTGCTGGCTTCTGTGCCCGCCGGCGCTTTTTCCCGCCTGCACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 72 bp TGGATCTGGTACATGCGGATGCCCGGGATAGGCCGCTaGTCCGGCCACTGGACAAGAGCAGCTGTGGCCCCG +
Preference number: 6 (lower is better)
Translates to: WIWYMRMPGIGR*SGHWTRAAVAP
Trigger: CGGGGCCACAGCTGCTCTTGTCCAGTGGCCGGATCAGCGGCCTATCCCGGGCATCCGCATGTACCAGATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 72 bp ATACACGGCGAGCACGCACAGATCGTAGGTCCGGCCTaGCGCCAGGTCCGTCAGCAGGAACGAGCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: IHGEHAQIVGPA*RQVRQQERAAL
Trigger: GAGAGCCGCTCGTTCCTGCTGACGGACCTGGCGTCAGGCCGGACCTACGATCTGTGCGTGCTCGCCGTGTAT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 72 bp CAGATCTTGGGGTTCCACGGCCGGATCTCGGGGTGCTaGTCCCAGATCAGGGTTCCAGGCTCGGGTTTCCGG +
Preference number: 6 (lower is better)
Translates to: QILGFHGRISGC*SQIRVPGSGFR
Trigger: CCGGAAACCCGAGCCTGGAACCCTGATCTGGGACCAGCACCCCGAGATCCGGCCGTGGAACCCCAAGATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246529.4
ENST00000587257.1
ENST00000588831.5
CDS CAA 72 bp CGGGAAAAAGCGCCGGCGGGCACAGAAGCCAGCAGGTaGTGGTCGAGGCCCAACGTGTTGACGTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: REKAPAGTEASR*WSRPNVLTLPR
Trigger: CCTGGGCAACGTCAACACGTTGGGCCTCGACCACAACCTGCTGGCTTCTGTGCCCGCCGGCGCTTTTTCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CAA 72 bp GGGTGGGGCGAGGCCTGGCCATGCCCAGCAATAGGCTaGATCTTTCAGGCCAGAGGGGCTCCTTCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: GWGEAWPCPAIG*IFQARGAPSQG
Trigger: GCCTTGGGAAGGAGCCCCTCTGGCCTGAAAGATCAAGCCTATTGCTGGGCATGGCCAGGCCTCGCCCCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587257.1
CDS CCA 72 bp TTCCAGGCTCGGGTTTCCGGAATTCCCGATTCAATCTaGGGGTGCAGGCCCCCGAGGTGGAGGTTAGGGCGC +
Preference number: 6 (lower is better)
Translates to: FQARVSGIPDSI*GCRPPRWRLGR
Trigger: GCGCCCTAACCTCCACCTCGGGGGCCTGCACCCCCAGATTGAATCGGGAATTCCGGAAACCCGAGCCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246529.4
ENST00000585876.1
ENST00000587257.1
CDS CAA 72 bp GCGGCGGAGGCTGACTGGCCATGCCCAGCAATAGGCTaGATCTTTCAGGCCAGAGGGGCTCCTTCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: AAEADWPCPAIG*IFQARGAPSQG
Trigger: GCCTTGGGAAGGAGCCCCTCTGGCCTGAAAGATCAAGCCTATTGCTGGGCATGGCCAGTCAGCCTCCGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585876.1
CDS TCA 72 bp TCCTGTCCCCAAGGCTTCTGTAGAGGGACTGTGTCCTaGCTCGGCTCAAATCTGTGGCAACGGAGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: SCPQGFCRGTVS*LGSNLWQRSLQ
Trigger: CTGGAGACTCCGTTGCCACAGATTTGAGCCGAGTCAGGACACAGTCCCTCTACAGAAGCCTTGGGGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS GCA 72 bp GGGAGGTCTCAAGCCCCAGATTTAAGCACTCAGGTCTaGAGCAAGGACTTCAGGCCCAAACTCGGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: GRSQAPDLSTQV*SKDFRPKLGFR
Trigger: CCTGAACCCGAGTTTGGGCCTGAAGTCCTTGCTGCAGACCTGAGTGCTTAAATCTGGGGCTTGAGACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS GCA 72 bp GTCAGAGGTCAGGGCTCTGGAGGGAGCATCTGGTCATaGTTTTCCTGTCCCCAAGGCTTCTGTAGAGGGACT +
Preference number: 6 (lower is better)
Translates to: VRGQGSGGSIWS*FSCPQGFCRGT
Trigger: AGTCCCTCTACAGAAGCCTTGGGGACAGGAAAAGCATGACCAGATGCTCCCTCCAGAGCCCTGACCTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 72 bp GGGTTCAGGCCCCTTGGAATCCCACAGTCCAGATCTTaGAATTTGAGGCCTGAATCCCAGGGTTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GFRPLGIPQSRS*NLRPESQGSGP
Trigger: GGGACCTGAACCCTGGGATTCAGGCCTCAAATTCCAAGATCTGGACTGTGGGATTCCAAGGGGCCTGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 72 bp ATTGGGCCTCTAGGGTCCAGTTTTACGGGTCCAGTTTaGGTTGTTCAGGGTCAGGGTCTCCCAGGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: IGPLGSSFTGPV*VVQGQGLPGPV
Trigger: GACTGGACCTGGGAGACCCTGACCCTGAACAACCCAAACTGGACCCGTAAAACTGGACCCTAGAGGCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CAA 72 bp TATTGGGCCTCTAGGGTCCAGTTTTACGGGTCCAGTTaGGGTTGTTCAGGGTCAGGGTCTCCCAGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: YWASRVQFYGSS*GCSGSGSPRSS
Trigger: ACTGGACCTGGGAGACCCTGACCCTGAACAACCCAAACTGGACCCGTAAAACTGGACCCTAGAGGCCCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CAA 72 bp ATTCCCGATTCAATCTGGCCATGCCCAGCAATAGGCTaGATCTTTCAGGCCAGAGGGGCTCCTTCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: IPDSIWPCPAIG*IFQARGAPSQG
Trigger: GCCTTGGGAAGGAGCCCCTCTGGCCTGAAAGATCAAGCCTATTGCTGGGCATGGCCAGATTGAATCGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588831.5
CDS CAA 90 bp ACCCCTAAATATTGGGCCTCTAGGGTCCAGTTTTACGGGTCCAGTTaGGGTTGTTCAGGGTCAGGGTCTCCCAGGTCCAGTCTTGGGATG +
Preference number: 6 (lower is better)
Translates to: TPKYWASRVQFYGSS*GCSGSGSPRSSLGM
Trigger: CATCCCAAGACTGGACCTGGGAGACCCTGACCCTGAACAACCCAAACTGGACCCGTAAAACTGGACCCTAGAGGCCCAATATTTAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 72 bp TGGAATCCCACAGTCCAGATCTTGGAATTTGAGGCCTaGATCCCAGGGTTCAGGTCCCCAAGAGTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: WNPTVQILEFEA*IPGFRSPRVGS
Trigger: GGAACCCACTCTTGGGGACCTGAACCCTGGGATTCAGGCCTCAAATTCCAAGATCTGGACTGTGGGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 72 bp TCTGAGATCCGATCCCGGGGTTCTGCATTCAGATATTaGGGTGCTGAGTCAAGATTGGGAGGTCTCAAGCCC +
Preference number: 6 (lower is better)
Translates to: SEIRSRGSAFRY*GAESRLGGLKP
Trigger: GGGCTTGAGACCTCCCAATCTTGACTCAGCACCCCAATATCTGAATGCAGAACCCCGGGATCGGATCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS TCA 72 bp ATTGTGGGGTTCCGGCTCCAAATATTGAGGTCCCAGTaGCCGATGTTGAGATTCCAGCCCCATATACTGGGG +
Preference number: 6 (lower is better)
Translates to: IVGFRLQILRSQ*PMLRFQPHILG
Trigger: CCCCAGTATATGGGGCTGGAATCTCAACATCGGTCACTGGGACCTCAATATTTGGAGCCGGAACCCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246529.4
ENST00000587257.1
ENST00000588831.5
CDS TCA 72 bp GGGATGCTAAGCAGCCAAACGGTGGGGTTTAGAGTCTaGGATCCGATCCCGGGGTTCTGCATTCAGATATTG +
Preference number: 6 (lower is better)
Translates to: GMLSSQTVGFRV*DPIPGFCIQIL
Trigger: CAATATCTGAATGCAGAACCCCGGGATCGGATCTCAGACTCTAAACCCCACCGTTTGGCTGCTTAGCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5
CDS CCA 72 bp GTTCTGCATTCAGATATTGGGGTGCTGAGTCAAGATTaGGAGGTCTCAAGCCCCAGATTTAAGCACTCAGGT +
Preference number: 6 (lower is better)
Translates to: VLHSDIGVLSQD*EVSSPRFKHSG
Trigger: ACCTGAGTGCTTAAATCTGGGGCTTGAGACCTCCCAATCTTGACTCAGCACCCCAATATCTGAATGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246529.4
ENST00000588831.5