RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRCH4 (Homo sapiens)

Ensembl gene IDs: ENSG00000077454

Ensembl transcript IDs: ENST00000310300.11, ENST00000467201.5, ENST00000470184.1, ENST00000476881.2, ENST00000485554.5, ENST00000485583.1, ENST00000487697.1, ENST00000490359.2, ENST00000497245.2, ENST00000498539.1, ENST00000619071.4

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGCCGGCATCTCAGGAGGGAGATGCTGGTGGGCACAGAGCCATaGCCACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCA +
Preference number: 1 (lower is better)
Translates to: RGRHLRREMLVGTEP*PQPPTRGADARARA
Trigger: TGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTGGCCATGGCTCTGTGCCCACCAGCATCTCCCTCCTGAGATGCCGGCCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
3UTR-3UTR CCA 90 bp GCGGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTTCTTCCAGGATGTGGTaGGGCTGGCACAGTGACTCC +
Preference number: 2 (lower is better)
Translates to: AEPRRVFCSRGPGRGGPCSSRMW*GWHSDS
Trigger: GGAGTCACTGTGCCAGCCCCACCACATCCTGGAAGA...ACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
3UTR-3UTR TCA 90 bp AGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGCACCACGTGCTTCTCTaGGAGCGCGGAGCCCAGGCG +
Preference number: 2 (lower is better)
Translates to: RASGFCLLRLTRHLRHPRHHVLL*ERGAQA
Trigger: CGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTG...CCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
3UTR-3UTR TCA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGTCTTTGGTTGGGGCTaGAGGCACCGCAGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GHEGTVSTERWGLVGLLEVFGWG*RHRRWG
Trigger: ACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGAC...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
3UTR-3UTR CCA 90 bp CAGGCAGGGCGGCCACGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCGACTCGTGGGGCTACTaGAGGGAGGCCAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: QAGRPRSVQFIHRDRDPADSWGY*REARGW
Trigger: CCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTC...GGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCGTGGCCGCCCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
3UTR-3UTR CCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCAGAGGTGGGGACTCGTaGGGCTACTGGAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPRGGDS*GYWREA
Trigger: GGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCT...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
3UTR-3UTR TCA 90 bp TTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTAGGCACCGTCAGCACTaGGAGGTGGGGACTCGTGGG +
Preference number: 2 (lower is better)
Translates to: FWLLFIAADTTPATPAVLRHRQH*EVGTRG
Trigger: CCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCT...AAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
3UTR-3UTR GCA 90 bp CCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCCACCCTCACCACGTaGTTCTCTGAGAGCGCGGAG +
Preference number: 2 (lower is better)
Translates to: PEGFWLLFIAADTTPATPATLTT*FSESAE
Trigger: CTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGC...GGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
3UTR-3UTR CCA 90 bp TTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTGTGGGCACAGAGCCATaGCCACAGCCACCAACACGC +
Preference number: 2 (lower is better)
Translates to: FWLLFIAADTTPATPAVLVGTEP*PQPPTR
Trigger: GCGTGTTGGTGGCTGTGGCCATGGCTCTGTGCCCAC...AAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
3UTR-3UTR TCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATAGGCACCGTCAGCACTaGGAGGTGGGGACTCGTGGG +
Preference number: 2 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDRHRQH*EVGTRG
Trigger: CCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCT...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
3UTR-3UTR CCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATGACTCGTGGGGCTACTaGAGGGAGGCCAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDDSWGY*REARGW
Trigger: CCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTC...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
3UTR-3UTR CCA 90 bp ACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCGCAGGTGGGGTCGGGTaGAGCAGGGACCTTATAAAT +
Preference number: 2 (lower is better)
Translates to: TEIGTRPGPRTPTNIDPLAGGVG*SRDLIN
Trigger: ATTTATAAGGTCCCTGCTCCACCCGACCCCACCTGC...GAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
3UTR GCA 72 bp TGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTaGTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: CFSESAEPRRVF*SRGPGRGGPCA
Trigger: GGCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
3UTR TCA 72 bp CCACCCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTaGCACGACACCTGCGACACCCGCGGTCCTTCCACC +
Preference number: 3 (lower is better)
Translates to: PPRGLLASVYCG*HDTCDTRGPST
Trigger: GGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
3UTR-3UTR CAA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGTGCACTAGTGTCTTaGGTTGGGGCTGAAGGCACC +
Preference number: 3 (lower is better)
Translates to: GHEGTVSTERWGLVGLLEGALVS*VGAEGT
Trigger: GGTGCCTTCAGCCCCAACCAAAGACACTAGTGCACC...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
3UTR TCA 72 bp CCGAGCATCACCGTGCGCTCGGGGCTCGGCGACAAATaGGACGCAAGAAAGCTGTCAGCGATAACAGAAGGG +
Preference number: 3 (lower is better)
Translates to: PSITVRSGLGDK*DARKLSAITEG
Trigger: CCCTTCTGTTATCGCTGACAGCTTTCTTGCGTCTCATTTGTCGCCGAGCCCCGAGCGCACGGTGATGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
3UTR-3UTR CAA 90 bp ACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCGGTGCACTAGTGTCTTaGGTTGGGGCTGAAGGCACC +
Preference number: 3 (lower is better)
Translates to: TEIGTRPGPRTPTNIDPLGALVS*VGAEGT
Trigger: GGTGCCTTCAGCCCCAACCAAAGACACTAGTGCACC...GAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
3UTR CCA 72 bp TTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTaGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: LVGAEGTAGGVG*SRDLINREEGK
Trigger: TTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCCCGCTCCTGCCACAGCTaGAAGGTGTCCGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: EPRRVFCSRGPGRGGPCARSCHS*KVSGRR
Trigger: GCGGCGCCCGGACACCTTGCAGCTGTGGCAGGAGCG...GGCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCGTCTTTGGTTGGGGCTaGAGGCACCGCAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GAQARLLLPGSRAGWALCVFGWG*RHRRWG
Trigger: ACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGAC...GCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GCGGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTAGCCTGGGTGATGTCTaGCAGGTCGTAGCTACGGGC +
Preference number: 4 (lower is better)
Translates to: AEPRRVFCSRGPGRGGPCSLGDV*QVVATG
Trigger: GCCCGTAGCTACGACCTGTCAGACATCACCCAGGCT...ACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCGGGCCCGCTCTGCACTaGGTCTCCCCGGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: ATNTRSRRARARTHTHTGGPALH*VSPADL
Trigger: CAGGTCTGCCGGGGAGACGCAGTGCAGAGCGGGCCC...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCTCCAGGGACACCAGCTaGCACGCCGCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: ATNTRSRRARARTHTHTGSRDTS*HAASGT
Trigger: GGTGCCCGAGGCGGCGTGCCAGCTGGTGTCCCTGGA...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCAGCTGGTTGGCCAGCTaGCACAGGATGACCCCACTG +
Preference number: 4 (lower is better)
Translates to: GAQARLLLPGSRAGWALCSWLAS*HRMTPL
Trigger: CAGTGGGGTCATCCTGTGCCAGCTGGCCAACCAGCT...GCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp GAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCCAGGATGTGGTGGGGCTaGCACAGTGACTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EPRRVFCSRGPGRGGPCARMWWG*HSDSSG
Trigger: GCCTGAGGAGTCACTGTGCCAGCCCCACCACATCCT...GGCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485554.5
CDS-3UTR GCA 90 bp CCATGGCCACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACCGCCTGCTGCTTGGTaGCCTCTCCCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PWPQPPTRGADARARAHTPPAAW*PLPVPC
Trigger: GCAGGGGACAGGGAGAGGGCACCAAGCAGCAGGCGG...TGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTGGCCATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GGCAGGGCCGGCGGGGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGCCGGCTCCTCCCGCCTaGTGCTTGGTGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRAGGDMKAPSALRGGDSPAPPA*CLVPSP
Trigger: GGGAGAGGGCACCAAGCAGCAGGCGGGAGGAGCCGG...CGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCCCCGCCGGCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp GCCCAGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCGGTTCAGGGTCCCGGTaGCCACGGCCTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: AQATLTTCFSESAEPRRVGSGSR*PRPPLG
Trigger: CCCTAGAGGAGGCCGTGGCCACCGGGACCCTGAACC...GACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCGGCAGCGTACTGAGCTaGTTCCTCCGGACATTGAGG +
Preference number: 4 (lower is better)
Translates to: GAQARLLLPGSRAGWALCGSVLS*FLRTLR
Trigger: CCTCAATGTCCGGAGGAACCAGCTCAGTACGCTGCC...GCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp CACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACCCGTTGTGCATGGCTTaGGTGGACACGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HSHQHAEQTRARAHTHTHPLCMA*VDTAAA
Trigger: GGCCGCCGCCGTGTCCACTCAAGCCATGCACAACGG...GTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp CCATGGCCACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACCAGCTGGCACAGGATaGCCCCACTGGCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PWPQPPTRGADARARAHTPAGTG*PHWPEP
Trigger: AGGCTCTGGCCAGTGGGGTCATCCTGTGCCAGCTGG...TGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTGGCCATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCCTCTGTTTATTGCGGCTaGCACGACACCTGCGACACC +
Preference number: 4 (lower is better)
Translates to: EPRRVFCSRGPGRGGPCASVYCG*HDTCDT
Trigger: GGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGA...GGCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR GCA 90 bp TGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCGGCTCCCTGCCCCGCTaGAGCCCCTGCTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CLWLGLKAPQVGSGGAGTGSLPR*SPCLGG
Trigger: GCCTCCCAAGCAGGGGCTGCAGCGGGGCAGGGAGCC...GGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp CACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACTCAGGCAGGGGCCGCTaGAGCCGGGACTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: HSHQHAEQTRARAHTHTHSGRGR*SRDSRT
Trigger: GGTCCTTGAGTCCCGGCTGCAGCGGCCCCTGCCTGA...GTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGGCAGCCCCCGGGCAGTaGCCTGGAGGAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: STERWGLVGLLEGGQRLGAAPGQ*PGGDPR
Trigger: CCTCGGATCTCCTCCAGGGCACTGCCCGGGGGCTGC...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCCCTCCTTGCGTTCTCTaGGTCCCCGGGGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PSALRGGDSWGYWREARGPPCVL*VPGAPG
Trigger: CCCGGGAGCCCCGGGGACCCAGAGAACGCAAGGAGG...GCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp GGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCTCCTCCCCGGGGACATaGCTGTCGATGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: GAQARLLLPGSRAGWALCSSPGT*LSMKSI
Trigger: GATTGACTTCATCGACAGCCATGTCCCCGGGGAGGA...GCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CCATGGCCACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACATGTGCATGGCTTGAGTaGACACGGCGGCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PWPQPPTRGADARARAHTCAWLE*TRRRPL
Trigger: GAGGGGCCGCCGCCGTGTCCACTCAAGCCATGCACA...TGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTGGCCATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GCGGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTATTGGAGCTCGTTGCTaGTCACGTCAAGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: AEPRRVFCSRGPGRGGPCIGARC*SRQAVA
Trigger: TGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAAT...ACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp CACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGGCCGACCCACGCTaGCCGGCCTCTGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: HSHQHAEQTRARAHTHTHRADPR*PASVDK
Trigger: TTTGTCCACAGAGGCCGGGCAGCGTGGGTCGGCCCT...GTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCCTGAGCCATCCTCCTTaGGTTCTCTGGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ATNTRSRRARARTHTHTGLSHPP*VLWVPG
Trigger: CCCGGGGACCCAGAGAACGCAAGGAGGATGGCTCAG...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGCGGGCACGGAGGTCGTaGCTGCCGCCTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: LVSLVGAEGTAGGVGWSRRARRS*LPPPHP
Trigger: GGGGTGAGGAGGCGGCAGCCACGACCTCCGTGCCCG...CCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACACTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CAGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTCTCCCCGGCAGACCTaGAGACCCGGGCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: QATLTTCFSESAEPRRVFSPRQT*RPGHGG
Trigger: ACCTCCGTGCCCGGGTCTCCAGGTCTGCCGGGGAGA...GAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CACAGCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACGACTCGTGGGGCTACTaGAGGGAGGCCAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HSHQHAEQTRARAHTHTHDSWGY*REARGW
Trigger: CCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTC...GTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCCCACCCAGAGGGCTTCTaGCTTCTGTTTATTGCGGCT +
Preference number: 4 (lower is better)
Translates to: EPRRVFCSRGPGRGGPCAHPEGF*LLFIAA
Trigger: AGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTG...GGCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR GCA 90 bp CTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGCCGGCTCCTCCCGCCTaGTGCTTGGTGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVSLVGAEGTAGGVGWSRPAPPA*CLVPSP
Trigger: GGGAGAGGGCACCAAGCAGCAGGCGGGAGGAGCCGG...CCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACACTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GCCCAGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTGGCCGTGGAGCAGGTaGTGTCGCTGGTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: AQATLTTCFSESAEPRRVWPWSR*CRWSSY
Trigger: ATAGCTGGACCAGCGACAGCACCTGCTCCACGGCCA...GACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR GCA 90 bp AGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTTCAGGCAGGGGCCGCTaGAGCCGGGACTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: RPPSPRASLRARSPGASSSGRGR*SRDSRT
Trigger: GGTCCTTGAGTCCCGGCTGCAGCGGCCCCTGCCTGA...AGAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGGGAGCCAAGTGGCCGTaGAGCAGGTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: STERWGLVGLLEGGQRLGGAKWP*SRCCRW
Trigger: CCAGCGACAGCACCTGCTCCACGGCCACTTGGCTCC...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp AGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTGAGCGCGGCCGTAGCTaGTTGGCCAGCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RPPSPRASLRARSPGASSERGRS*LASWHR
Trigger: CCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTC...AGAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCAGAGGTGGGGACTCGTaGGGCTACTGGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSALRGGDSWGYWREARGRGGDS*GYWREA
Trigger: GGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCT...GCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp GGCAGGGCCGGCGGGGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGGTGGGCACAGAGCCATaGCCACAGCCACCAACACGC +
Preference number: 4 (lower is better)
Translates to: GRAGGDMKAPSALRGGDSVGTEP*PQPPTR
Trigger: GCGTGTTGGTGGCTGTGGCCATGGCTCTGTGCCCAC...CGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCCCCGCCGGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCACAGGTCAGCCTGGGTaGTGTCTGACAGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: ATNTRSRRARARTHTHTGTGQPG*CLTGRS
Trigger: GCTACGACCTGTCAGACATCACCCAGGCTGACCTGT...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCAACGCTGTGGAAGCCTaGGTCCAGCCCACCATCGTA +
Preference number: 4 (lower is better)
Translates to: ATNTRSRRARARTHTHTGNAVEA*VQPTIV
Trigger: TACGATGGTGGGCTGGACTCAGGCTTCCACAGCGTT...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp TGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCACGGAGGTCGTGGCTaGCGCCTCCTCACCCCCGGC +
Preference number: 4 (lower is better)
Translates to: CLLRLTRHLRHPRSFHPDHGGRG*RLLTPG
Trigger: GCCGGGGGTGAGGAGGCGGCAGCCACGACCTCCGTG...GTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp TGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCGCGCCCCGGGGGAAGTaGTTCAAGCGCCGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: CLWLGLKAPQVGSGGAGTAPRGK*FKRRLD
Trigger: GTCTAACCGGCGCTTGAAGCACTTCCCCCGGGGCGC...GGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp TGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCCCCCGCTGCAGCCCCTaGTTGGGAGGCACTGGACTT +
Preference number: 4 (lower is better)
Translates to: CLWLGLKAPQVGSGGAGTPRCSP*LGGTGL
Trigger: AAGTCCAGTGCCTCCCAAGCAGGGGCTGCAGCGGGG...GGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GGCAGGGCCGGCGGGGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGCCGTGGAGCAGGTaGTGTCGCTGGTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GRAGGDMKAPSALRGGDSWPWSR*CRWSSY
Trigger: ATAGCTGGACCAGCGACAGCACCTGCTCCACGGCCA...CGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCCCCGCCGGCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp AGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGGGGGCGGTAGGGCCTTaGCCCCCACCCGCTTCACGG +
Preference number: 4 (lower is better)
Translates to: RASGFCLLRLTRHLRHPRGAVGP*PPPASR
Trigger: CCGTGAAGCGGGTGGGGGGCAAGGCCCTACCGCCCC...CCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGGCGAGCCGTTGTGCATaGCTTGAGTGGACACGGCGG +
Preference number: 4 (lower is better)
Translates to: STERWGLVGLLEGGQRLGASRCA*LEWTRR
Trigger: CCGCCGTGTCCACTCAAGCCATGCACAACGGCTCGC...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGGCTGCAGCCCCTGCTTaGGAGGCACTGGACTTAGGC +
Preference number: 4 (lower is better)
Translates to: STERWGLVGLLEGGQRLGAAAPA*EALDLG
Trigger: GCCTAAGTCCAGTGCCTCCCAAGCAGGGGCTGCAGC...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp TTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCTCGAGGAGCCAAGTGGCCGTaGAGCAGGTGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LRLTRHLRHPRSFHPDPRGAKWP*SRCCRW
Trigger: CCAGCGACAGCACCTGCTCCACGGCCACTTGGCTCC...TCGAGGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp TGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCGACTCGTGGGGCTACTaGAGGGAGGCCAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLWLGLKAPQVGSGGAGTDSWGY*REARGW
Trigger: CCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTC...GGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGGATAGGGACCCGGCCTaGGCCCCGAACCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: STERWGLVGLLEGGQRLGDRDPA*APNPYK
Trigger: TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATC...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp TCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCCCCACGGTGCCCCCTaGGGCTTCCGGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGFCLLRLTRHLRHPRSFPHGAP*GFRPVA
Trigger: TGCCACAGGCCGGAAGCCGCAGGGGGCACCGTGGGG...GAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp AGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTGCCACCCTCACCACGTaGTTCTCTGAGAGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: RPPSPRASLRARSPGASSATLTT*FSESAE
Trigger: CTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGC...AGAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp GGCAGGGCCGGCGGGGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGCTGGCAGATGTAGGGTaGCAGCAGCGACAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GRAGGDMKAPSALRGGDSLADVG*QQRQLV
Trigger: AACCAGCTGTCGCTGCTGCCACCCTACATCTGCCAG...CGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCCCCGCCGGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGAGCAGGTGCTGTCGCTaGTCCAGCTATGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: STERWGLVGLLEGGQRLGSRCCR*SSYGKG
Trigger: CCCCTTCCCATAGCTGGACCAGCGACAGCACCTGCT...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCAGGGAGGGCCGATTTTaGGGCCTAGGAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSALRGGDSWGYWREARGREGRF*GLGTQE
Trigger: CTCCTGGGTTCCTAGGCCCCAAAATCGGCCCTCCCT...GCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCGCAGGTGGGGTCGGGTaGAGCAGGGACCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: ATNTRSRRARARTHTHTGAGGVG*SRDLIN
Trigger: ATTTATAAGGTCCCTGCTCCACCCGACCCCACCTGC...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GAGGGCCACCCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGGCTTCCGGCCTGTaGCAGGGGGTCGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: EGHPEGFWLLFIAADTTPAASGL*QGVGGR
Trigger: TCTGCCCCCGACCCCCTGCCACAGGCCGGAAGCCGC...AGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGCTGCAGGGCAGGGACTaGAACTCGGGGGCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: GHEGTVSTERWGLVGLLELQGRD*NSGAEK
Trigger: CTTCTCGGCCCCCGAGTTTCAGTCCCTGCCCTGCAG...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGAACGCTGTGGAAGCCTaGGTCCAGCCCACCATCGTA +
Preference number: 4 (lower is better)
Translates to: STERWGLVGLLEGGQRLGNAVEA*VQPTIV
Trigger: TACGATGGTGGGCTGGACTCAGGCTTCCACAGCGTT...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp TCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCTTAGGGTCTCCGTCCGCTaGGCCATCCTCCTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: SLVGAEGTAGGVGWSRDLRVSVR*AILLAF
Trigger: GAACGCAAGGAGGATGGCTCAGCGGACGGAGACCCT...AAGGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp TTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCAGGCACCGTCAGCACTaGGAGGTGGGGACTCGTGGG +
Preference number: 4 (lower is better)
Translates to: FIAADTTPATPAVLPPRPRHRQH*EVGTRG
Trigger: CCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCT...GGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGAGGCACCGTCAGCACTaGGAGGTGGGGACTCGTGGG +
Preference number: 4 (lower is better)
Translates to: GHEGTVSTERWGLVGLLERHRQH*EVGTRG
Trigger: CCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCT...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGCTCCTCCCGCCTGCTaGTTGGTGCCCTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GHEGTVSTERWGLVGLLEAPPAC*LVPSPC
Trigger: ACAGGGAGAGGGCACCAAGCAGCAGGCGGGAGGAGC...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGGGGGCGGTAGGGCCTTaGCCCCCACCCGCTTCACGG +
Preference number: 4 (lower is better)
Translates to: GGVGWSRDLINREEGKGVGAVGP*PPPASR
Trigger: CCGTGAAGCGGGTGGGGGGCAAGGCCCTACCGCCCC...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp ACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTGCTCCGCAGACCTGGGCAGGTaGACTCTGCAGAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TLTTCFSESAEPRRVFCSADLGR*TLQRVA
Trigger: AGCAACCCTCTGCAGAGTCCACCTGCCCAGGTCTGC...GGAGCAGAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp TTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCTCGAAGCAGGTGCTGTCGCTaGTCCAGCTATGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LRLTRHLRHPRSFHPDPRSRCCR*SSYGKG
Trigger: CCCCTTCCCATAGCTGGACCAGCGACAGCACCTGCT...TCGAGGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp TTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCTCGAAGCTGGTTGGCCAGCTaGCACAGGATGACCCCACTG +
Preference number: 4 (lower is better)
Translates to: LRLTRHLRHPRSFHPDPRSWLAS*HRMTPL
Trigger: CAGTGGGGTCATCCTGTGCCAGCTGGCCAACCAGCT...TCGAGGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CAGGCAGGGCGGCCACGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCGAGCGCGGCCGTAGCTaGTTGGCCAGCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QAGRPRSVQFIHRDRDPAERGRS*LASWHR
Trigger: CCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTC...GGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCGTGGCCGCCCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCCACCCAGAGGGCTTCTaGCTTCTGTTTATTGCGGCT +
Preference number: 4 (lower is better)
Translates to: ATNTRSRRARARTHTHTGHPEGF*LLFIAA
Trigger: AGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTG...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp TTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCCTCCCACAACAGCCCTaGGCCCTGGCTTCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FIAADTTPATPAVLPPRPLPQQP*ALASRG
Trigger: GCCTCTTGAAGCCAGGGCTCAGGGCTGTTGTGGGAG...GGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGGCCTGAGCCACTCTaGGAGGAGGAACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GHEGTVSTERWGLVGLLEGPEPL*EEERKR
Trigger: CCTCTTCCGTTCCTCCTCTCAGAGTGGCTCAGGCCC...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp CCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCGGGCTCGGCGACAAATaGGACGCAAGAAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PSALRGGDSWGYWREARGGLGDK*DARKLS
Trigger: TGACAGCTTTCTTGCGTCTCATTTGTCGCCGAGCCC...GCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp CAGGCAGGGCGGCCACGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCCCCCGCTGCAGCCCCTaGTTGGGAGGCACTGGACTT +
Preference number: 4 (lower is better)
Translates to: QAGRPRSVQFIHRDRDPAPRCSP*LGGTGL
Trigger: AAGTCCAGTGCCTCCCAAGCAGGGGCTGCAGCGGGG...GGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCGTGGCCGCCCTGCCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAGGCTCCCTGCCCCGCTaGAGCCCCTGCTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKGSLPR*SPCLGG
Trigger: GCCTCCCAAGCAGGGGCTGCAGCGGGGCAGGGAGCC...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGGCAGCCCCCGGGCAGTaGCCTGGAGGAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: GGVGWSRDLINREEGKGVAAPGQ*PGGDPR
Trigger: CCTCGGATCTCCTCCAGGGCACTGCCCGGGGGCTGC...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GAGGGCCACCCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTTTAGCTTCCCCACGGTaGCCCCTGCGGCTTCCGGCC +
Preference number: 4 (lower is better)
Translates to: EGHPEGFWLLFIAADTTPLASPR*PLRLPA
Trigger: GGCCGGAAGCCGCAGGGGGCACCGTGGGGAAGCTAA...AGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp TCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCTTGCAGACCTGGGCAGGTaGACTCTGCAGAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLVGAEGTAGGVGWSRDLADLGR*TLQRVA
Trigger: AGCAACCCTCTGCAGAGTCCACCTGCCCAGGTCTGC...AAGGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CAGGCAGGGCGGCCACGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCGCAGGGGAGGGCACATaGATGAAGGGCACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QAGRPRSVQFIHRDRDPAAGEGT*MKGTER
Trigger: GCGCTCCGTGCCCTTCATCCATGTGCCCTCCCCTGC...GGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCGTGGCCGCCCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CAGGCAGGGCGGCCACGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCAGAGGTGGGGACTCGTaGGGCTACTGGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QAGRPRSVQFIHRDRDPARGGDS*GYWREA
Trigger: GGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCT...GGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCGTGGCCGCCCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp TTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCTCGATCTTCCAGGATGTGGTaGGGCTGGCACAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: LRLTRHLRHPRSFHPDPRSSRMW*GWHSDS
Trigger: GGAGTCACTGTGCCAGCCCCACCACATCCTGGAAGA...TCGAGGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGAGCTGGTTGGCCAGCTaGCACAGGATGACCACTGGC +
Preference number: 4 (lower is better)
Translates to: LVSLVGAEGTAGGVGWSRSWLAS*HRMTTG
Trigger: GCCAGTGGTCATCCTGTGCCAGCTGGCCAACCAGCT...CCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619071.4
CDS-3UTR TCA 90 bp CAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCTGCAGGGCAGGGACTaGAACTCGGGGGCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: QRASGFCLLRLTRHLRHPLQGRD*NSGAEK
Trigger: CTTCTCGGCCCCCGAGTTTCAGTCCCTGCCCTGCAG...CGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCAGGGTCTCCGTCCGCTaGGCCATCCTCCTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPRVSVR*AILLAF
Trigger: GAACGCAAGGAGGATGGCTCAGCGGACGGAGACCCT...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp TCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCCAGCTGGCACAGGATaGCCCCACTGGCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SGFCLLRLTRHLRHPRSFPAGTG*PHWPEP
Trigger: AGGCTCTGGCCAGTGGGGTCATCCTGTGCCAGCTGG...GAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR GCA 90 bp TGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCGGGATTGGAGCTCGTTaGTGCTCACGTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: CLWLGLKAPQVGSGGAGTGIGAR*CSRQAV
Trigger: GACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCC...GGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp CCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTCGATGAAGTCAATCTaGACAGGGTCTCCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: PSALRGGDSWGYWREARGSMKSI*TGSPSA
Trigger: AGCGGACGGAGACCCTGTGCAGATTGACTTCATCGA...GCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp ACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTGCTCCCCACTATCAACGCTGTaGAAGCCTGAGTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TLTTCFSESAEPRRVFCSPLSTL*KPESSP
Trigger: TGGGCTGGACTCAGGCTTCCACAGCGTTGATAGTGG...GGAGCAGAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp TCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCTTTTCTCATCTGGAACCTaGGGGTACCGCCGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLVGAEGTAGGVGWSRDLFSSGT*GYRRGL
Trigger: GAGACCTCGGCGGTACCCCCAGGTTCCAGATGAGAA...AAGGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCAGGGGAGGGCACATaGATGAAGGGCACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PEGFWLLFIAADTTPATPAGEGT*MKGTER
Trigger: GCGCTCCGTGCCCTTCATCCATGTGCCCTCCCCTGC...GGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CAGGCAGGGCGGCCACGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCGATAGGGACCCGGCCTaGGCCCCGAACCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: QAGRPRSVQFIHRDRDPADRDPA*APNPYK
Trigger: TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATC...GGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCGTGGCCGCCCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp CTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAGACGCTCCGGGAGCATaGGAGGCCGGCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LYSLYTEIGTRPGPRTPTDAPGA*EAGISG
Trigger: TCCTGAGATGCCGGCCTCTCATGCTCCCGGAGCGTC...TGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp TCCGGGAGCATGAGAGGCCGGCATCTCAGGAGGGAGATGCTGGTGGGCACAGAGTCTGTTTATTGCGGCTaGCACGACACCTGCGACACC +
Preference number: 4 (lower is better)
Translates to: SGSMRGRHLRREMLVGTESVYCG*HDTCDT
Trigger: GGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGA...CTCTGTGCCCACCAGCATCTCCCTCCTGAGATGCCGGCCTCTCATGCTCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTCCAGCAGAATGACCTaGAGGTGCCTCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPSSRMT*RCLRRQ
Trigger: CTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGA...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp AGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCTCAGACCACCTCTTGCTaGCACTATCAACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RPPSPRASLRARSPGASSQTTSC*HYQRCG
Trigger: TCCACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTG...AGAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAACCGCCTGCTGCTTGGTaGCCTCTCCCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKPPAAW*PLPVPC
Trigger: GCAGGGGACAGGGAGAGGGCACCAAGCAGCAGGCGG...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGGCTCCTCCCGCCTGCTaGTTGGTGCCCTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GGVGWSRDLINREEGKGVAPPAC*LVPSPC
Trigger: ACAGGGAGAGGGCACCAAGCAGCAGGCGGGAGGAGC...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp TGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACTGGCCGTGGAGCAGGTaGTGTCGCTGGTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: CLLRLTRHLRHPRSFHPDWPWSR*CRWSSY
Trigger: ATAGCTGGACCAGCGACAGCACCTGCTCCACGGCCA...GTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR GCA 90 bp GAGGGCCACCCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGGAGACTCCAGCTCCTaGCACCCCTCACGGGGTACA +
Preference number: 4 (lower is better)
Translates to: EGHPEGFWLLFIAADTTPGDSSS*HPSRGT
Trigger: TGTACCCCGTGAGGGGTGGCAGGAGCTGGAGTCTCC...AGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAACCCGAGCATCACCGTaGGCTCGGGGCTCGGCGACA +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKTRASP*ARGSAT
Trigger: TGTCGCCGAGCCCCGAGCGCACGGTGATGCTCGGGT...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp CAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGGCCACCCTCACCACGTaGTTCTCTGAGAGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: QRASGFCLLRLTRHLRHPATLTT*FSESAE
Trigger: CTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGC...CGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp GGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCGGGACAGGTCAGCCTaGGTGATGTCTGACAGGTCG +
Preference number: 4 (lower is better)
Translates to: GFCLLRLTRHLRHPRSFHRDRSA*VMSDRS
Trigger: CGACCTGTCAGACATCACCCAGGCTGACCTGTCCCG...GTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCCCCTTCAGGCAGACCTaGGCAGGTGGACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPPFRQT*AGGLCR
Trigger: TCTGCAGAGTCCACCTGCCCAGGTCTGCCTGAAGGG...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp TCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCTTTCCTCCCCGGGGACATaGCTGTCGATGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: SLVGAEGTAGGVGWSRDLSSPGT*LSMKSI
Trigger: GATTGACTTCATCGACAGCCATGTCCCCGGGGAGGA...AAGGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp TTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCTCGAAACAGCCCTGAGCCCTaGCTTCAAGAGGCTATCCTT +
Preference number: 4 (lower is better)
Translates to: LRLTRHLRHPRSFHPDPRNSPEP*LQEAIL
Trigger: AAGGATAGCCTCTTGAAGCCAGGGCTCAGGGCTGTT...TCGAGGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACTCGCTGGTCCAGCTATaGGAAGGGGCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GFCLLRLTRHLRHPRSFHSLVQL*EGALGR
Trigger: CCTCCCAAGAGCCCCTTCCCATAGCTGGACCAGCGA...GTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTCGCTGGTCCAGCTATaGGAAGGGGCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPSLVQL*EGALGR
Trigger: CCTCCCAAGAGCCCCTTCCCATAGCTGGACCAGCGA...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAGAGCGCGGCCGTAGCTaGTTGGCCAGCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKERGRS*LASWHR
Trigger: CCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTC...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCAGGGAGGGCCGATTTTaGGGCCTAGGAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPREGRF*GLGTQE
Trigger: CTCCTGGGTTCCTAGGCCCCAAAATCGGCCCTCCCT...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp GAGGGCCACCCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGGTTCCTCCGGACATTaGGGTCCCGCAGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EGHPEGFWLLFIAADTTPGSSGH*GPAGKR
Trigger: TCTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACC...AGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp TTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTGGGCCTGAGCCACTCTaGGAGGAGGAACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FWLLFIAADTTPATPAVLGPEPL*EEERKR
Trigger: CCTCTTCCGTTCCTCCTCTCAGAGTGGCTCAGGCCC...AAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR GCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAAGGGCCGACCCACGCTaGCCGGCCTCTGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKRADPR*PASVDK
Trigger: TTTGTCCACAGAGGCCGGGCAGCGTGGGTCGGCCCT...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp CTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGCAGACCACCTCTTGCTaGCACTATCAACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVSLVGAEGTAGGVGWSRQTTSC*HYQRCG
Trigger: TCCACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTG...CCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCGCTCCTGCCACAGCTaGAAGGTGTCCGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDRSCHS*KVSGRR
Trigger: GCGGCGCCCGGACACCTTGCAGCTGTGGCAGGAGCG...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp ATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTACAAATCAGGCAGGGGCCGCTaGAGCCGGGACTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: IGTRPGPRTPTNIDPLYKSGRGR*SRDSRT
Trigger: GGTCCTTGAGTCCCGGCTGCAGCGGCCCCTGCCTGA...TTTGTAGAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp CTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAGGAGACTCCAGCTCCTaGCACCCCTCACGGGGTACA +
Preference number: 4 (lower is better)
Translates to: LYSLYTEIGTRPGPRTPTGDSSS*HPSRGT
Trigger: TGTACCCCGTGAGGGGTGGCAGGAGCTGGAGTCTCC...TGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp TGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCTGGCAGATGTAGGGTaGCAGCAGCGACAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: CLLRLTRHLRHPRSFHPDLADVG*QQRQLV
Trigger: AACCAGCTGTCGCTGCTGCCACCCTACATCTGCCAG...GTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCTCCGAGGGCAGGGATTaGAGCTCGTTGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: PEGFWLLFIAADTTPATPSEGRD*SSLLLT
Trigger: CGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGA...GGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CGGCGACAAATGAGACGCAAGAAAGCTGTCAGCGATAACAGAAGGGAGGTGACACCTCCTTGCGTTCTCTaGGTCCCCGGGGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RRQMRRKKAVSDNRREVTPPCVL*VPGAPG
Trigger: CCCGGGAGCCCCGGGGACCCAGAGAACGCAAGGAGG...TGTCACCTCCCTTCTGTTATCGCTGACAGCTTTCTTGCGTCTCATTTGTCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp CAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGTCGCTGGTCCAGCTATaGGAAGGGGCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRASGFCLLRLTRHLRHPSLVQL*EGALGR
Trigger: CCTCCCAAGAGCCCCTTCCCATAGCTGGACCAGCGA...CGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCAGCAGGTGCTGTCGCTaGTCCAGCTATGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PEGFWLLFIAADTTPATPSRCCR*SSYGKG
Trigger: CCCCTTCCCATAGCTGGACCAGCGACAGCACCTGCT...GGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCCTGAATGGAGCCAAGTaGCCGTGGAGCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPLNGAK*PWSRCC
Trigger: ACAGCACCTGCTCCACGGCCACTTGGCTCCATTCAG...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp AGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGCTGAATGGAGCCAAGTaGCCGTGGAGCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RASGFCLLRLTRHLRHPRLNGAK*PWSRCC
Trigger: ACAGCACCTGCTCCACGGCCACTTGGCTCCATTCAG...CCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGTCAGGAGGGAGATGCTaGTGGGCACAGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: QRASGFCLLRLTRHLRHPSGGRC*WAQSHG
Trigger: GCCATGGCTCTGTGCCCACCAGCATCTCCCTCCTGA...CGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp ACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCGGTTCCTCCGGACATTaGGGTCCCGCAGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TEIGTRPGPRTPTNIDPLGSSGH*GPAGKR
Trigger: TCTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACC...GAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGAAGCTGTTTGGTCTCTaGATGGAGCCAAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: GHEGTVSTERWGLVGLLEKLFGL*MEPSGR
Trigger: ACGGCCACTTGGCTCCATTCAGAGACCAAACAGCTT...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAGTCTTTGGTTGGGGCTaGAGGCACCGCAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKVFGWG*RHRRWG
Trigger: ACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGAC...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCACCACGTGCTTCTCTaGGAGCGCGGAGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDHHVLL*ERGAQA
Trigger: CGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTG...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAACTGAGCCATCCTCCTTaGGTTCTCTGGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKLSHPP*VLWVPG
Trigger: CCCGGGGACCCAGAGAACGCAAGGAGGATGGCTCAG...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACATCCGAGGGCAGGGATTaGAGCTCGTTGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: LYSLYTEIGTRPGPRTPTSEGRD*SSLLLT
Trigger: CGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGA...TGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGCCCTTCAGGCAGACCTaGGCAGGTGGACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GGVGWSRDLINREEGKGVPFRQT*AGGLCR
Trigger: TCTGCAGAGTCCACCTGCCCAGGTCTGCCTGAAGGG...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp TTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCTGTTTGGTCTCTGAATaGAGCCAAGTGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: FIAADTTPATPAVLPPRPCLVSE*SQVAVE
Trigger: CTCCACGGCCACTTGGCTCCATTCAGAGACCAAACA...GGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp CCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCTTCTCATCTGGAACCTaGGGGTACCGCCGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PEGFWLLFIAADTTPATPFSSGT*GYRRGL
Trigger: GAGACCTCGGCGGTACCCCCAGGTTCCAGATGAGAA...GGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp TCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCTCTTCCAGGATGTGGTaGGGCTGGCACAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SGFCLLRLTRHLRHPRSFSSRMW*GWHSDS
Trigger: GGAGTCACTGTGCCAGCCCCACCACATCCTGGAAGA...GAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR TCA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCAAGCTGTTTGGTCTCTaGATGGAGCCAAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPKLFGL*MEPSGR
Trigger: ACGGCCACTTGGCTCCATTCAGAGACCAAACAGCTT...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp ATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTACAAAGGGCCTGAGCCACTCTaGGAGGAGGAACGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IGTRPGPRTPTNIDPLYKGPEPL*EEERKR
Trigger: CCTCTTCCGTTCCTCCTCTCAGAGTGGCTCAGGCCC...TTTGTAGAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp AGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGCATAGAGCAGCAGCATaGGGACCACGTAGAAGACGA +
Preference number: 4 (lower is better)
Translates to: RASGFCLLRLTRHLRHPRHRAAA*GPRRRR
Trigger: TCGTCTTCTACGTGGTCCTCATGCTGCTGCTCTATG...CCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATCCAGCAGAATGACCTaGAGGTGCCTCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKSSRMT*RCLRRQ
Trigger: CTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGA...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAGGCAGCGTACTGAGCTaGTTCCTCCGGACATTGAGG +
Preference number: 4 (lower is better)
Translates to: LYSLYTEIGTRPGPRTPTGSVLS*FLRTLR
Trigger: CCTCAATGTCCGGAGGAACCAGCTCAGTACGCTGCC...TGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGCTGAATGGAGCCAAGTaGCCGTGGAGCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGVGWSRDLINREEGKGVLNGAK*PWSRCC
Trigger: ACAGCACCTGCTCCACGGCCACTTGGCTCCATTCAG...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp TGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACTGTTTGGTCTCTGAATaGAGCCAAGTGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: CLLRLTRHLRHPRSFHPDCLVSE*SQVAVE
Trigger: CTCCACGGCCACTTGGCTCCATTCAGAGACCAAACA...GTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CCA 90 bp TTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGAGCAGGGGAGGGCACATaGATGAAGGGCACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FIHRDRDPAWAPNPYKYRAGEGT*MKGTER
Trigger: GCGCTCCGTGCCCTTCATCCATGTGCCCTCCCCTGC...TCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp TCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCGGACATGGCTGTCGATaGAGTCAATCTGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: SGFCLLRLTRHLRHPRSFGHGCR*SQSAQG
Trigger: ACCCTGTGCAGATTGACTTCATCGACAGCCATGTCC...GAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp CAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGAAGCTGTTTGGTCTCTaGATGGAGCCAAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: QRASGFCLLRLTRHLRHPKLFGL*MEPSGR
Trigger: ACGGCCACTTGGCTCCATTCAGAGACCAAACAGCTT...CGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR TCA 90 bp CCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCAGGACCTGGCGCAGCTaGGTCATTAAGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PEGFWLLFIAADTTPATPRTWRS*VIKSFS
Trigger: TGAGAAGGACTTAATGACTCAGCTGCGCCAGGTCCT...GGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR GCA 90 bp GCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCAGACCACCTCTTaGTGCCACTATCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: ASGFCLLRLTRHLRHPRSFQTTS*CHYQRC
Trigger: ACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAA...GGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR GCA 90 bp CAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGTCGATGAAGTCAATCTaGACAGGGTCTCCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: QRASGFCLLRLTRHLRHPSMKSI*TGSPSA
Trigger: AGCGGACGGAGACCCTGTGCAGATTGACTTCATCGA...CGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp ACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCGAGATTCCCCAAGGCTaGGTTCAGGCATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TEIGTRPGPRTPTNIDPLEIPQG*VQASQA
Trigger: TGCCTGAGATGCCTGAACCCAGCCTTGGGGAATCTC...GAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGCCACTATCAACGCTGTaGAAGCCTGAGTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGVGWSRDLINREEGKGVPLSTL*KPESSP
Trigger: TGGGCTGGACTCAGGCTTCCACAGCGTTGATAGTGG...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CGGCGACAAATGAGACGCAAGAAAGCTGTCAGCGATAACAGAAGGGAGGTGACAGCTGCAGCCCCTGCTTaGGAGGCACTGGACTTAGGC +
Preference number: 4 (lower is better)
Translates to: RRQMRRKKAVSDNRREVTAAAPA*EALDLG
Trigger: GCCTAAGTCCAGTGCCTCCCAAGCAGGGGCTGCAGC...TGTCACCTCCCTTCTGTTATCGCTGACAGCTTTCTTGCGTCTCATTTGTCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGGCAGGTGGGGTCGGGTaGAGCAGGGACCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: GGVGWSRDLINREEGKGVAGGVG*SRDLIN
Trigger: ATTTATAAGGTCCCTGCTCCACCCGACCCCACCTGC...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp CGGCGACAAATGAGACGCAAGAAAGCTGTCAGCGATAACAGAAGGGAGGTGACACTTCGGGCAGCGTACTaGGCTGGTTCCTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: RRQMRRKKAVSDNRREVTLRAAY*AGSSGH
Trigger: ATGTCCGGAGGAACCAGCTCAGTACGCTGCCCGAAG...TGTCACCTCCCTTCTGTTATCGCTGACAGCTTTCTTGCGTCTCATTTGTCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp TCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCTTCTGTGGACAAATACTTaGAGATGTGAAGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLVGAEGTAGGVGWSRDLLWTNT*RCEVSP
Trigger: AGGGGAAACTTCACATCTTCAAGTATTTGTCCACAG...AAGGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp CGGCGACAAATGAGACGCAAGAAAGCTGTCAGCGATAACAGAAGGGAGGTGACAGCGGCAGAAGGAGACTaGGATTCGGGAGACGCGGTT +
Preference number: 4 (lower is better)
Translates to: RRQMRRKKAVSDNRREVTAAEGD*DSGDAV
Trigger: AACCGCGTCTCCCGAATCCCAGTCTCCTTCTGCCGC...TGTCACCTCCCTTCTGTTATCGCTGACAGCTTTCTTGCGTCTCATTTGTCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATGCGGCAGAAGGAGACTaGGATTCGGGAGACGCGGTT +
Preference number: 4 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDAAEGD*DSGDAV
Trigger: AACCGCGTCTCCCGAATCCCAGTCTCCTTCTGCCGC...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp ACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTGTTTGGTCTCTGAATaGAGCCAAGTGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: TEIGTRPGPRTPTNIDPLCLVSE*SQVAVE
Trigger: CTCCACGGCCACTTGGCTCCATTCAGAGACCAAACA...GAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CCA 90 bp ATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTACAAATTCTCATCTGGAACCTaGGGGTACCGCCGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: IGTRPGPRTPTNIDPLYKFSSGT*GYRRGL
Trigger: GAGACCTCGGCGGTACCCCCAGGTTCCAGATGAGAA...TTTGTAGAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAAGGACCTGGCGCAGCTaGGTCATTAAGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKRTWRS*VIKSFS
Trigger: TGAGAAGGACTTAATGACTCAGCTGCGCCAGGTCCT...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp ATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTACAAAGGACATGGCTGTCGATaGAGTCAATCTGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: IGTRPGPRTPTNIDPLYKGHGCR*SQSAQG
Trigger: ACCCTGTGCAGATTGACTTCATCGACAGCCATGTCC...TTTGTAGAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATGGGATTGGAGCTCGTTaGTGCTCACGTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDGIGAR*CSRQAV
Trigger: GACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCC...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp CCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCAAATACTTGAAGATGTaGAGTTTCCCCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PEGFWLLFIAADTTPATPKYLKM*SFPFRQ
Trigger: CTGCCTGAAGGGGAAACTTCACATCTTCAAGTATTT...GGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp GAGGGCCACCCAGAGGGCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTCTGTGGACAAATACTTaGAGATGTGAAGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: EGHPEGFWLLFIAADTTPLWTNT*RCEVSP
Trigger: AGGGGAAACTTCACATCTTCAAGTATTTGTCCACAG...AGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGCCCTCTGGGTGGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR TCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATAGGACCTGGCGCAGCTaGGTCATTAAGTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDRTWRS*VIKSFS
Trigger: TGAGAAGGACTTAATGACTCAGCTGCGCCAGGTCCT...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCATAGAGCAGCAGCATaGGGACCACGTAGAAGACGA +
Preference number: 4 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDHRAAA*GPRRRR
Trigger: TCGTCTTCTACGTGGTCCTCATGCTGCTGCTCTATG...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp TTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGAATTGGAGCTCGTTGCTaGTCACGTCAAGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: FIHRDRDPAWAPNPYKYRIGARC*SRQAVA
Trigger: TGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAAT...TCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR GCA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATTTCCAGACCACCTCTTaGTGCCACTATCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDFQTTS*CHYQRC
Trigger: ACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAA...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR TCA 90 bp TTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGAAAATACTTGAAGATGTaGAGTTTCCCCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FIHRDRDPAWAPNPYKYRKYLKM*SFPFRQ
Trigger: CTGCCTGAAGGGGAAACTTCACATCTTCAAGTATTT...TCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS GCA 90 bp GCGTCTCCCCGGCAGACCTGGAGACCCGGGCACGGAGGTCGTGGCTaGCGCCTCCTCACCCCCGGCGGCGAGTGGAGCCGCTACGGCCGC +
Preference number: 5 (lower is better)
Translates to: ASPRQTWRPGHGGRG*RLLTPGGEWSRYGR
Trigger: GCGGCCGTAGCGGCTCCACTCGCCGCCGGGGGTGAGGAGGCGGCAGCCACGACCTCCGTGCCCGGGTCTCCAGGTCTGCCGGGGAGACGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485583.1
CDS CCA 90 bp CACTGCGTCTCCCCGGCAGACCTGGAGACCCGGGCACGGAGGTCGTaGCTGCCGCCTCCTCACCCCCGGCGGCGAGTGGAGCCGCTACGG +
Preference number: 5 (lower is better)
Translates to: HCVSPADLETRARRS*LPPPHPRRRVEPLR
Trigger: CCGTAGCGGCTCCACTCGCCGCCGGGGGTGAGGAGGCGGCAGCCACGACCTCCGTGCCCGGGTCTCCAGGTCTGCCGGGGAGACGCAGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485583.1
CDS-3UTR CAA 90 bp GCGGAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTCGCGGCCGTAGCTGGTaGGCCAGCTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: AEPRRVFCSRGPGRGGPCRGRSW*ASWHRM
Trigger: CATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCG...ACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS GCA 90 bp TCAGGGTCCCGGTGGCCACGGCCTCCTCTAGGGCCCGCTCTGCACTaGGTCTCCCCGGCAGACCTGGAGACCCGGGCACGGAGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: SGSRWPRPPLGPALH*VSPADLETRARRSW
Trigger: CCACGACCTCCGTGCCCGGGTCTCCAGGTCTGCCGGGGAGACGCAGTGCAGAGCGGGCCCTAGAGGAGGCCGTGGCCACCGGGACCCTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485583.1
CDS GCA 90 bp CCACCCGCTTCACGGCCTCCAGCGCGGTCCGCAGCCCCCGGGCAGTaGCCTGGAGGAGATCCGAGGGCGAGCACAGGTCAGCCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: PPASRPPARSAAPGQ*PGGDPRASTGQPQA
Trigger: TGCCTGAGGCTGACCTGTGCTCGCCCTCGGATCTCCTCCAGGGCACTGCCCGGGGGCTGCGGACCGCGCTGGAGGCCGTGAAGCGGGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000476881.2
ENST00000497245.2
ENST00000619071.4
CDS TCA 90 bp AGGGCACGGAGCGCGGCCGTAGCTGGTTGGCCAGCTGGCACAGGATaGCCCCACTGGCCAGAGCCTCGGCCAGGTCCTCAGGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: RARSAAVAGWPAGTG*PHWPEPRPGPQAGA
Trigger: GGCCCCTGCCTGAGGACCTGGCCGAGGCTCTGGCCAGTGGGGTCATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTCCGTGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000476881.2
ENST00000485554.5
ENST00000497245.2
CDS-3UTR CAA 90 bp GAGCCCAGGCGCGTCTTCTGCTCCCGGGGTCCCGGGCGGGGTGGGCCCTGTGCCGCTCCCAGCTTGTTGTaGCTGACGATGAGGACCCTC +
Preference number: 5 (lower is better)
Translates to: EPRRVFCSRGPGRGGPCAAPSLL*LTMRTL
Trigger: GAGGGTCCTCATCGTCAGCAACAACAAGCTGGGAGC...GGCACAGGGCCCACCCCGCCCGGGACCCCGGGAGCAGAAGACGCGCCTGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CAA 90 bp CAGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCCCTCCCGCCTGCTGCTaGGTGCCCTCTCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QATLTTCFSESAEPRRVFPPACC*VPSPCP
Trigger: GGGACAGGGAGAGGGCACCAAGCAGCAGGCGGGAGG...GAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS CCA 90 bp GCAGGGGAGGGCACATGGATGAAGGGCACGGAGCGCGGCCGTAGCTaGTTGGCCAGCTGGCACAGGATGACCACTGGCCAGAGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AGEGTWMKGTERGRS*LASWHRMTTGQSLA
Trigger: GGCCAGGCTCTGGCCAGTGGTCATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTCCGTGCCCTTCATCCATGTGCCCTCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619071.4
CDS-3UTR CAA 90 bp CCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCGCCGTTGTGCATGGCTaGAGTGGACACGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PSALRGGDSWGYWREARGAVVHG*SGHGGG
Trigger: GCCGCCGCCGTGTCCACTCAAGCCATGCACAACGGC...GCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CAA 90 bp CTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGCCTCCCGCCTGCTGCTaGGTGCCCTCTCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: LVSLVGAEGTAGGVGWSRPPACC*VPSPCP
Trigger: GGGACAGGGAGAGGGCACCAAGCAGCAGGCGGGAGG...CCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACACTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp TGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCCGCGGCCGTAGCTGGTaGGCCAGCTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: CLWLGLKAPQVGSGGAGTRGRSW*ASWHRM
Trigger: CATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCG...GGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp GGCAGGGCCGGCGGGGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGGAGGGAGGGCCGATTTaGGGGCCTAGGAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: GRAGGDMKAPSALRGGDSEGGPI*GPRNPG
Trigger: TCCTGGGTTCCTAGGCCCCAAAATCGGCCCTCCCTC...CGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCCCCGCCGGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS CCA 90 bp ACATGGATGAAGGGCACGGAGCGCGGCCGTAGCTGGTTGGCCAGCTaGCACAGGATGACCCCACTGGCCAGAGCCTCGGCCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TWMKGTERGRSWLAS*HRMTPLARASARSS
Trigger: TGAGGACCTGGCCGAGGCTCTGGCCAGTGGGGTCATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTCCGTGCCCTTCATCCATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000476881.2
ENST00000485554.5
ENST00000497245.2
CDS CCA 90 bp CTCGTGCTCACTCCCTCACCCTTGGCTCCAGCTGGCCAGTCACCCTaGGCCCAGCACAGCCTCTCCCCTGGGTGGCTCAAGTCATTCCCC +
Preference number: 5 (lower is better)
Translates to: LVLTPSPLAPAGQSP*AQHSLSPGWLKSFP
Trigger: GGGGAATGACTTGAGCCACCCAGGGGAGAGGCTGTGCTGGGCCCAGGGTGACTGGCCAGCTGGAGCCAAGGGTGAGGGAGTGAGCACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS-3UTR CAA 90 bp GCCACCAACACGCGGAGCAGACGCGCGCGCGCGCGCACACACACACACACAGGCGGACTCTGCAGAGGGTaGCTGTCCAGCAGAATGACC +
Preference number: 5 (lower is better)
Translates to: ATNTRSRRARARTHTHTGGLCRG*LSSRMT
Trigger: GGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCC...GCCTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTGCTCCGCGTGTTGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS GCA 90 bp TTGTGGCCGCCCGGGAGTCCCCTTTCCCCAGCACGGGCCCAGCACTaGACCCTGCATGAAATGCTGCCTGCCCACAGGGAAAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LWPPGSPLSPARAQH*TLHEMLPAHRERCL
Trigger: AAGGCACCTTTCCCTGTGGGCAGGCAGCATTTCATGCAGGGTGCAGTGCTGGGCCCGTGCTGGGGAAAGGGGACTCCCGGGCGGCCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 90 bp TCTGCACAGGGTCTCCGTCCGCTGAGCCATCCTCCTTGCGTTCTCTaGGTCCCCGGGGCTCCCGGGCCAGCTCTGAGATCCGGAATGACA +
Preference number: 5 (lower is better)
Translates to: SAQGLRPLSHPPCVL*VPGAPGPALRSGMT
Trigger: TGTCATTCCGGATCTCAGAGCTGGCCCGGGAGCCCCGGGGACCCAGAGAACGCAAGGAGGATGGCTCAGCGGACGGAGACCCTGTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000497245.2
ENST00000619071.4
CDS CCA 90 bp ACCTCCTGTGACATGCAACCAGGGCTGCAGATGTTGAGCGGATTGTaGCCGCCCGGGAGTCCCCTTTCCCCAGCACGGGCCCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: TSCDMQPGLQMLSGL*PPGSPLSPARAQHC
Trigger: GCAGTGCTGGGCCCGTGCTGGGGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 90 bp GAAGCTGTTTGGTCTCTGAATGGAGCCAAGTGGCCGTGGAGCAGGTaGTGTCGCTGGGGCCGGAACCAGGGACACAGCGACAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: EAVWSLNGAKWPWSR*CRWGRNQGHSDRGR
Trigger: CCTGCCCCTGTCGCTGTGTCCCTGGTTCCGGCCCCAGCGACAGCACCTGCTCCACGGCCACTTGGCTCCATTCAGAGACCAAACAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467201.5
ENST00000476881.2
ENST00000490359.2
CDS CCA 90 bp GATTCTGGTCCACGGTCTAAGCGAGCCTCCCTGAGAGGGCCCATCTaGACGTCAGCTCAGCTTCCCCGGGAAGGCCCATCCGGACGTCAG +
Preference number: 5 (lower is better)
Translates to: DSGPRSKRASLRGPI*TSAQLPREGPSGRQ
Trigger: CTGACGTCCGGATGGGCCTTCCCGGGGAAGCTGAGCTGACGTCCAGATGGGCCCTCTCAGGGAGGCTCGCTTAGACCGTGGACCAGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS-3UTR CAA 90 bp GCTTCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCCGCGGCCGTAGCTGGTaGGCCAGCTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: ASGFCLLRLTRHLRHPRSRGRSW*ASWHRM
Trigger: CATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCG...GGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS CCA 90 bp AGGTCCCGCAGGGAAGAGAGGCCACACAGTTCCGAGGGCAGGGATTaGAGCTCGTTGCTGCTCACGTCAAGCTGTCGCAGGCTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: RSRREERPHSSEGRD*SSLLLTSSCRRLPR
Trigger: CCTGGGAAGCCTGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGAACTGTGTGGCCTCTCTTCCCTGCGGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000497245.2
ENST00000619071.4
CDS-3UTR CAA 90 bp GCCCAGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCGGAAGAGGAAGCTGTTaGGTCTCTGAATGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: AQATLTTCFSESAEPRRVGRGSC*VSEWSQ
Trigger: TTGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCC...GACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS-3UTR CAA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGAGGGAGGGCCGATTTaGGGGCCTAGGAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: GHEGTVSTERWGLVGLLEEGGPI*GPRNPG
Trigger: TCCTGGGTTCCTAGGCCCCAAAATCGGCCCTCCCTC...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp TGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGACCGGTGCACTAGTGTCTTaGGTTGGGGCTGAAGGCACC +
Preference number: 5 (lower is better)
Translates to: CLWLGLKAPQVGSGGAGTGALVS*VGAEGT
Trigger: GGTGCCTTCAGCCCCAACCAAAGACACTAGTGCACC...GGTCCCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS TCA 90 bp AGACCTGGGCAGGTGGACTCTGCAGAGGGTTGCTGTCCAGCAGAATaGCCTGCAGGTGCCTCAGGCGGCAGAAGGAGACTGGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: RPGQVDSAEGCCPAE*PAGASGGRRRLGFG
Trigger: CCCGAATCCCAGTCTCCTTCTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCCACCTGCCCAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000487697.1
ENST00000497245.2
ENST00000619071.4
CDS TCA 90 bp CCGCGTTTCCCACCTCACTGCCCACCCCTCCGGGCCCTCAGCTTCTaGGCCTTCCCAGGTGCTGTTTGCTCAGCTGGGAGAACTCCATTT +
Preference number: 5 (lower is better)
Translates to: PRFPPHCPPLRALSF*AFPGAVCSAGRTPF
Trigger: AAATGGAGTTCTCCCAGCTGAGCAAACAGCACCTGGGAAGGCTCAGAAGCTGAGGGCCCGGAGGGGTGGGCAGTGAGGTGGGAAACGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS TCA 90 bp CCTGTTCAAACACCTCCTGTGACATGCAACCAGGGCTGCAGATGTTaGGCGGATTGTGGCCGCCCGGGAGTCCCCTTTCCCCAGCACGGG +
Preference number: 5 (lower is better)
Translates to: PVQTPPVTCNQGCRC*ADCGRPGVPFPQHG
Trigger: CCCGTGCTGGGGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGTGTTTGAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS TCA 90 bp TCCTCTCTCCACATGATTCTGGTCCACGGTCTAAGCGAGCCTCCCTaGGAGGGCCCATCTGGACGTCAGCTCAGCTTCCCCGGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SSLHMILVHGLSEPP*EGPSGRQLSFPGKA
Trigger: GGCCTTCCCGGGGAAGCTGAGCTGACGTCCAGATGGGCCCTCTCAGGGAGGCTCGCTTAGACCGTGGACCAGAATCATGTGGAGAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS TCA 90 bp TCACCTGGGCAGGTGGACTCTGCAGAGGGTTGCTGTCCAGCAGAATaGCCTGCAGGTGCCTCAGGCGGCAGAAGGAGACTGGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: SPGQVDSAEGCCPAE*PAGASGGRRRLGFG
Trigger: CCCGAATCCCAGTCTCCTTCTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCCACCTGCCCAGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 90 bp TGGGCAGGTGGACTCTGCAGAGGGTTGCTGTCCAGCAGAATGACCTaGAGGTGCCTCAGGCGGCAGAAGGAGACTGGGATTCGGGAGACG +
Preference number: 5 (lower is better)
Translates to: WAGGLCRGLLSSRMT*RCLRRQKETGIRET
Trigger: CGTCTCCCGAATCCCAGTCTCCTTCTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCCACCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000497245.2
ENST00000619071.4
CDS GCA 90 bp GCCTCTGCCTGGCACCCTGCAATTTGGAGGTCCCCAGTTCAGAGGTaGTCTCCCAGGGCTGACACCCTCAATCACCCATGGACAGGACGC +
Preference number: 5 (lower is better)
Translates to: ASAWHPAIWRSPVQR*SPRADTLNHPWTGR
Trigger: GCGTCCTGTCCATGGGTGATTGAGGGTGTCAGCCCTGGGAGAGCACCTCTGAACTGGGGACCTCCAAATTGCAGGGTGCCAGGCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS GCA 90 bp CCATCCACAGACACCAGGGTGGAGGGTGCATGGTTGGACAGATCCTaGGGGTGGAGGCGTGGAAGGACAGTCTCTAGCTGGCCAGCACTC +
Preference number: 5 (lower is better)
Translates to: PSTDTRVEGAWLDRS*GWRRGRTVSSWPAL
Trigger: GAGTGCTGGCCAGCTAGAGACTGTCCTTCCACGCCTCCACCCGCAGGATCTGTCCAACCATGCACCCTCCACCCTGGTGTCTGTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497245.2
CDS CCA 90 bp CGCTGCTCCTCCACAGTGCCTCGCTCTTCATCCTCCCCGGGGACATaGCTGTCGATGAAGTCAATCTGCACAGGGTCTCCGTCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: RCSSTVPRSSSSPGT*LSMKSICTGSPSAE
Trigger: CTCAGCGGACGGAGACCCTGTGCAGATTGACTTCATCGACAGCCATGTCCCCGGGGAGGATGAAGAGCGAGGCACTGTGGAGGAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000497245.2
ENST00000619071.4
CDS CCA 90 bp GCCCACCATCGTACCGATGTCCCGGAAATAGATCCTCTGCAGGGCTaGGGCCAGCCAGGCGGATCTGGTCAGCCTGATGCTGGACAACAG +
Preference number: 5 (lower is better)
Translates to: AHHRTDVPEIDPLQG*GQPGGSGQPDAGQQ
Trigger: CTGTTGTCCAGCATCAGGCTGACCAGATCCGCCTGGCTGGCCCCAGCCCTGCAGAGGATCTATTTCCGGGACATCGGTACGATGGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS CCA 90 bp ACAGACACCAGGGTGGAGGGTGCATGGTTGGACAGATCCTGCGGGTaGAGGCGTGGAAGGACAGTCTCTAGCTGGCCAGCACTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TDTRVEGAWLDRSCG*RRGRTVSSWPALPA
Trigger: AGCTGGGAGTGCTGGCCAGCTAGAGACTGTCCTTCCACGCCTCCACCCGCAGGATCTGTCCAACCATGCACCCTCCACCCTGGTGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497245.2
CDS CCA 90 bp CCCACCCCCTACCATCCACAGACACCAGGGTGGAGGGTGCATGGTTaGACAGATCCTGCGGGTGGAGGCGTGGAAGGACAGTCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: PTPYHPQTPGWRVHG*TDPAGGGVEGQSLA
Trigger: AGCTAGAGACTGTCCTTCCACGCCTCCACCCGCAGGATCTGTCCAACCATGCACCCTCCACCCTGGTGTCTGTGGATGGTAGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497245.2
CDS-3UTR CAA 90 bp AGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGACATTCTTCCGAGCCTaGAGGGCACTGAGTTTTGGC +
Preference number: 5 (lower is better)
Translates to: STERWGLVGLLEGGQRLGTFFRA*RALSFG
Trigger: GCCAAAACTCAGTGCCCTCAAGGCTCGGAAGAATGT...CCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS GCA 90 bp GGTGGACTCTGCAGAGGGTTGCTGTCCAGCAGAATGACCTGCAGGTaGCTCAGGCGGCAGAAGGAGACTGGGATTCGGGAGACGCGGTTA +
Preference number: 5 (lower is better)
Translates to: GGLCRGLLSSRMTCR*LRRQKETGIRETRL
Trigger: TAACCGCGTCTCCCGAATCCCAGTCTCCTTCTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000497245.2
ENST00000619071.4
CDS CCA 90 bp GTTGCTGACGATGAGGACCCTCAGGGGCAGCTGGCAGATGTAGGGTaGCAGCAGCGACAGCTGGTTTCGGCTGAGGTTGAGGTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: VADDEDPQGQLADVG*QQRQLVSAEVEVGE
Trigger: CTCACCTACCTCAACCTCAGCCGAAACCAGCTGTCGCTGCTGCCACCCTACATCTGCCAGCTGCCCCTGAGGGTCCTCATCGTCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310300.11
ENST00000497245.2
ENST00000619071.4
CDS CCA 90 bp GTCCAGCAGAATGACCTGCAGGTGCCTCAGGCGGCAGAAGGAGACTaGGATTCGGGAGACGCGGTTACAGGAGAAATCCAGGCGGACCAG +
Preference number: 5 (lower is better)
Translates to: VQQNDLQVPQAAEGD*DSGDAVTGEIQADQ
Trigger: CTGGTCCGCCTGGATTTCTCCTGTAACCGCGTCTCCCGAATCCCAGTCTCCTTCTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000497245.2
ENST00000619071.4
CDS CCA 90 bp GTTGCTGACGATGAGGACCCTCAGGGGCAGCTGGCAGATGTAGGGTaGCAGCAGCGACAGCTGGTTTCGGCTGTGGAAGGGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: VADDEDPQGQLADVG*QQRQLVSAVEGRKA
Trigger: TGCCTTTCTCCCTTCCACAGCCGAAACCAGCTGTCGCTGCTGCCACCCTACATCTGCCAGCTGCCCCTGAGGGTCCTCATCGTCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470184.1
CDS CCA 90 bp TGGAACAGGTGGGCAAGGGAAAAGTCAGGAACATGCTCAGGGCTGTaGCCTCGTGCTCACTCCCTCACCCTTGGCTCCAGCTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: WNRWAREKSGTCSGL*PRAHSLTLGSSWPV
Trigger: GACTGGCCAGCTGGAGCCAAGGGTGAGGGAGTGAGCACGAGGCCACAGCCCTGAGCATGTTCCTGACTTTTCCCTTGCCCACCTGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 90 bp GCTCTCACCTCCACAGTGCCTCGCTCTTCATCCTCCCCGGGGACATaGCTGTCGATGAAGTCAATCTGCACAGGGTCTCCGTCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALTSTVPRSSSSPGT*LSMKSICTGSPSAE
Trigger: CTCAGCGGACGGAGACCCTGTGCAGATTGACTTCATCGACAGCCATGTCCCCGGGGAGGATGAAGAGCGAGGCACTGTGGAGGTGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498539.1
CDS GCA 90 bp CCTCTCCCCTGGGTGGCTCAAGTCATTCCCCGGGAGAAACCTCCCTaGTCCTCTCTCCACATGATTCTGGTCCACGGTCTAAGCGAGCCT +
Preference number: 5 (lower is better)
Translates to: PLPWVAQVIPREKPP*SSLHMILVHGLSEP
Trigger: AGGCTCGCTTAGACCGTGGACCAGAATCATGTGGAGAGAGGAGCAGGGAGGTTTCTCCCGGGGAATGACTTGAGCCACCCAGGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 90 bp GGGCTGCCTCCACTGCTCACCACTGACTCTGTAGCTGGGTCCCAGTaGCCTGGCACCTACACCTCCTGCCTCTCTGCTTGTGGGATTTTT +
Preference number: 5 (lower is better)
Translates to: GLPPLLTTDSVAGSQ*PGTYTSCLSACGIF
Trigger: AAAAATCCCACAAGCAGAGAGGCAGGAGGTGTAGGTGCCAGGCCACTGGGACCCAGCTACAGAGTCAGTGGTGAGCAGTGGAGGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476881.2
CDS-3UTR CAA 90 bp TCTGGCTTCTGTTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCTGGTTCCTCCGGACATaGAGGTCCCGCAGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SGFCLLRLTRHLRHPRSFWFLRT*RSRREE
Trigger: CTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACCA...GAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAACAGAAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CAA 90 bp CTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGACATTCTTCCGAGCCTaGAGGGCACTGAGTTTTGGC +
Preference number: 5 (lower is better)
Translates to: LVSLVGAEGTAGGVGWSRTFFRA*RALSFG
Trigger: GCCAAAACTCAGTGCCCTCAAGGCTCGGAAGAATGT...CCTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCGGTGCACTAGTGTCTTaGGTTGGGGCTGAAGGCACC +
Preference number: 5 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPGALVS*VGAEGT
Trigger: GGTGCCTTCAGCCCCAACCAAAGACACTAGTGCACC...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS CCA 90 bp TCGGCTGAGGTTGAGGTAGGTGAGGGCTGTGAGATTCCCCAAGGCTaGGTTCAGGCATCTCAGGCAATTGTGGTAGAGGCTCAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SAEVEVGEGCEIPQG*VQASQAIVVEAQAL
Trigger: GAGGGCCTGAGCCTCTACCACAATTGCCTGAGATGCCTGAACCCAGCCTTGGGGAATCTCACAGCCCTCACCTACCTCAACCTCAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000497245.2
CDS CCA 90 bp CCAGTTCAGAGGTGCTCTCCCAGGGCTGACACCCTCAATCACCCATaGACAGGACGCCCTTACCTCATTTCCAGACCACCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PVQRCSPRADTLNHP*TGRPYLISRPPLAA
Trigger: GGCAGCAAGAGGTGGTCTGGAAATGAGGTAAGGGCGTCCTGTCCATGGGTGATTGAGGGTGTCAGCCCTGGGAGAGCACCTCTGAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS-3UTR CAA 90 bp CGGTCTGTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCAGGGATTGGAGCTCGTaGCTGCTCACGTCAAGCTGT +
Preference number: 5 (lower is better)
Translates to: RSVQFIHRDRDPAWAPNPRDWSS*LLTSSC
Trigger: ACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCT...GGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTACAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp ATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTACAAACGCTGCAGCCCCTGCTaGGGAGGCACTGGACTTAGG +
Preference number: 5 (lower is better)
Translates to: IGTRPGPRTPTNIDPLYKRCSPC*GGTGLR
Trigger: CCTAAGTCCAGTGCCTCCCAAGCAGGGGCTGCAGCG...TTTGTAGAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp TTTATTGCGGCTGACACGACACCTGCGACACCCGCGGTCCTTCCACCCAGACCCACATTCTTCCGAGCCTaGAGGGCACTGAGTTTTGGC +
Preference number: 5 (lower is better)
Translates to: FIAADTTPATPAVLPPRPTFFRA*RALSFG
Trigger: GCCAAAACTCAGTGCCCTCAAGGCTCGGAAGAATGT...GGGTCTGGGTGGAAGGACCGCGGGTGTCGCAGGTGTCGTGTCAGCCGCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485554.5
CDS TCA 90 bp CCCTGCAATTTGGAGGTCCCCAGTTCAGAGGTGCTCTCCCAGGGCTaGCACCCTCAATCACCCATGGACAGGACGCCCTTACCTCATTTC +
Preference number: 5 (lower is better)
Translates to: PCNLEVPSSEVLSQG*HPQSPMDRTPLPHF
Trigger: GAAATGAGGTAAGGGCGTCCTGTCCATGGGTGATTGAGGGTGTCAGCCCTGGGAGAGCACCTCTGAACTGGGGACCTCCAAATTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS CCA 90 bp CTACCTGAGGTTGAGGTAGGTGAGGGCTGTGAGATTCCCCAAGGCTaGGTTCAGGCATCTCAGGCAATTGTGGTAGAGGCTCAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LPEVEVGEGCEIPQG*VQASQAIVVEAQAL
Trigger: GAGGGCCTGAGCCTCTACCACAATTGCCTGAGATGCCTGAACCCAGCCTTGGGGAATCTCACAGCCCTCACCTACCTCAACCTCAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470184.1
ENST00000485583.1
CDS CCA 90 bp CTCTCCAGTTCTTCATTCTTCTCACCTTCGGGCAGCGTACTGAGCTaGTTCCTCCGGACATTGAGGTCCCGCAGGGAAGAGAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: LSSSSFFSPSGSVLS*FLRTLRSRREERPH
Trigger: GTGTGGCCTCTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACCAGCTCAGTACGCTGCCCGAAGGTGAGAAGAATGAAGAACTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470184.1
CDS-3UTR CAA 90 bp CAGGCCACCCTCACCACGTGCTTCTCTGAGAGCGCGGAGCCCAGGCGCGTCTTCCTGAAAATTCATCTGTaGACTCATTTCCAGACCACC +
Preference number: 5 (lower is better)
Translates to: QATLTTCFSESAEPRRVFLKIHL*THFQTT
Trigger: GGTGGTCTGGAAATGAGTCAACAGATGAATTTTCAG...GAAGACGCGCCTGGGCTCCGCGCTCTCAGAGAAGCACGTGGTGAGGGTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CAA 90 bp CGGCGACAAATGAGACGCAAGAAAGCTGTCAGCGATAACAGAAGGGAGGTGACAGCTGAGCCATCCTCCTaGCGTTCTCTGGGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: RRQMRRKKAVSDNRREVTAEPSS*RSLGPR
Trigger: CCGGGGACCCAGAGAACGCAAGGAGGATGGCTCAGC...TGTCACCTCCCTTCTGTTATCGCTGACAGCTTTCTTGCGTCTCATTTGTCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CAA 90 bp TTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATGCTGAGCCATCCTCCTaGCGTTCTCTGGGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: LYTEIGTRPGPRTPTNIDAEPSS*RSLGPR
Trigger: CCGGGGACCCAGAGAACGCAAGGAGGATGGCTCAGC...ATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp CGGCGACAAATGAGACGCAAGAAAGCTGTCAGCGATAACAGAAGGGAGGTGACACGCTGCAGCCCCTGCTaGGGAGGCACTGGACTTAGG +
Preference number: 5 (lower is better)
Translates to: RRQMRRKKAVSDNRREVTRCSPC*GGTGLR
Trigger: CCTAAGTCCAGTGCCTCCCAAGCAGGGGCTGCAGCG...TGTCACCTCCCTTCTGTTATCGCTGACAGCTTTCTTGCGTCTCATTTGTCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310300.11
CDS-3UTR CAA 90 bp GGACATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAAGAGGAAGCTGTTaGGTCTCTGAATGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GHEGTVSTERWGLVGLLEGRGSC*VSEWSQ
Trigger: TTGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCC...CTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGACGGTGCCTTCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS GCA 90 bp CAGCACTGCACCCTGCATGAAATGCTGCCTGCCCACAGGGAAAGGTaGCTTTTGCTCATCTTAAAAAGGCACAGTCTGGGACCGGCACGG +
Preference number: 5 (lower is better)
Translates to: QHCTLHEMLPAHRER*LLLILKRHSLGPAR
Trigger: CCGTGCCGGTCCCAGACTGTGCCTTTTTAAGATGAGCAAAAGGCACCTTTCCCTGTGGGCAGGCAGCATTTCATGCAGGGTGCAGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 90 bp TCACCCATGGACAGGACGCCCTTACCTCATTTCCAGACCACCTCTTaGTGCCACTATCAACGCTGTGGAAGCCTGAGTCCAGCCCACCAT +
Preference number: 5 (lower is better)
Translates to: SPMDRTPLPHFQTTS*CHYQRCGSLSPAHH
Trigger: ATGGTGGGCTGGACTCAGGCTTCCACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAAATGAGGTAAGGGCGTCCTGTCCATGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS-3UTR CAA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGAGGGATTGGAGCTCGTaGCTGCTCACGTCAAGCTGT +
Preference number: 5 (lower is better)
Translates to: GGVGWSRDLINREEGKGVRDWSS*LLTSSC
Trigger: ACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCT...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAGGACTCTGCAGAGGGTaGCTGTCCAGCAGAATGACC +
Preference number: 5 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKGLCRG*LSSRMT
Trigger: GGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCC...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS GCA 90 bp CTGGCTCACCTTCCTAACCCCATGCTTTGCACATGCTGGGTCCTCTaGCTGGATGCAGAAGGCTGGGGAATTCTCCTTCAATGTTCGGCT +
Preference number: 5 (lower is better)
Translates to: LAHLPNPMLCTCWVL*LDAEGWGILLQCSA
Trigger: AGCCGAACATTGAAGGAGAATTCCCCAGCCTTCTGCATCCAGGCAGAGGACCCAGCATGTGCAAAGCATGGGGTTAGGAAGGTGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 90 bp CTCACCTTCCTAACCCCATGCTTTGCACATGCTGGGTCCTCTGCCTaGATGCAGAAGGCTGGGGAATTCTCCTTCAATGTTCGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LTFLTPCFAHAGSSA*MQKAGEFSFNVRLP
Trigger: TGGGAGCCGAACATTGAAGGAGAATTCCCCAGCCTTCTGCATCCAGGCAGAGGACCCAGCATGTGCAAAGCATGGGGTTAGGAAGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 90 bp CCGGGCCCTCAGCTTCTGAGCCTTCCCAGGTGCTGTTTGCTCAGCTaGGAGAACTCCATTTTCCCCATCCATGCATCTTTCAAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: PGPQLLSLPRCCLLS*ENSIFPIHASFKVQ
Trigger: CTGAACCTTGAAAGATGCATGGATGGGGAAAATGGAGTTCTCCCAGCTGAGCAAACAGCACCTGGGAAGGCTCAGAAGCTGAGGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS-3UTR CAA 90 bp ATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTACAAAGCTCCCAGCTTGTTGTaGCTGACGATGAGGACCCTC +
Preference number: 5 (lower is better)
Translates to: IGTRPGPRTPTNIDPLYKAPSLL*LTMRTL
Trigger: GAGGGTCCTCATCGTCAGCAACAACAAGCTGGGAGC...TTTGTAGAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS-3UTR CAA 90 bp ACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATATAGATCCTCTCTTTCCAGACCACCTCTaGCTGCCACTATCAACGCTG +
Preference number: 5 (lower is better)
Translates to: TEIGTRPGPRTPTNIDPLFPDHL*LPLSTL
Trigger: CAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAAA...GAGAGGATCTATATTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS CCA 90 bp CATCACCACCTCCTCGGTGGATCGTTCCAGACATCCCAGATTGGATaGAACTCATTGCTCTTGCCTCTGTCCCCAGGACATCTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: HHHLLGGSFQTSQIG*NSLLLPLSPGHLAW
Trigger: CCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCACCGAGGAGGTGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 90 bp CAAGCATCACCACCTCCTCGGTGGATCGTTCCAGACATCCCAGATTaGATGGAACTCATTGCTCTTGCCTCTGTCCCCAGGACATCTTGC +
Preference number: 5 (lower is better)
Translates to: QASPPPRWIVPDIPD*MELIALASVPRTSC
Trigger: GCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCACCGAGGAGGTGGTGATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS-3UTR CAA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAATTTCCAGACCACCTCTaGCTGCCACTATCAACGCTG +
Preference number: 5 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKFPDHL*LPLSTL
Trigger: CAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAAA...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS TCA 90 bp TCAAATGATCAGCACAAGGCACAAACCCTGTTCAAACACCTCCTGTaGCATGCAACCAGGGCTGCAGATGTTGAGCGGATTGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: SNDQHKAQTLFKHLL*HATRAADVERIVAA
Trigger: GGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGTGTTTGAACAGGGTTTGTGCCTTGTGCTGATCATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS-3UTR CAA 90 bp GTACAGTTTATACACAGAGATAGGGACCCGGCCTGGGCCCCGAACCCCTACAAAGGAAGAGGAAGCTGTTaGGTCTCTGAATGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: VQFIHRDRDPAWAPNPYKGRGSC*VSEWSQ
Trigger: TTGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCC...TTTGTAGGGGTTCGGGGCCCAGGCCGGGTCCCTATCTCTGTGTATAAACTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS TCA 90 bp CCATGTATAAGCTACCCGGTCTGCAGTGTTTTCGTTACCGCAGCCTaGGCCAACTGGGACGCACATACAAACACCTCCTCTCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: PCISYPVCSVFVTAA*ANWDAHTNTSSPVL
Trigger: AAGAACTGGAGAGGAGGTGTTTGTATGTGCGTCCCAGTTGGCTCAGGCTGCGGTAACGAAAACACTGCAGACCGGGTAGCTTATACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470184.1
CDS GCA 90 bp GATTGGATGGAACTCATTGCTCTTGCCTCTGTCCCCAGGACATCTTaGTTGGATTTCTTTTTATGGCCCAGAGAGAGCCCTTCCTACCCC +
Preference number: 5 (lower is better)
Translates to: DWMELIALASVPRTS*LDFFLWPRESPSYP
Trigger: GGGGTAGGAAGGGCTCTCTCTGGGCCATAAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS-3UTR CAA 90 bp GGTGGGGTCGGGTGGAGCAGGGACCTTATAAATAGAGAGGAAGGGAAAGGGGTGCTGAAAATTCATCTGTaGACTCATTTCCAGACCACC +
Preference number: 5 (lower is better)
Translates to: GGVGWSRDLINREEGKGVLKIHL*THFQTT
Trigger: GGTGGTCTGGAAATGAGTCAACAGATGAATTTTCAG...CACCCCTTTCCCTTCCTCTCTATTTATAAGGTCCCTGCTCCACCCGACCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000619071.4
CDS GCA 90 bp GTGGATCGTTCCAGACATCCCAGATTGGATGGAACTCATTGCTCTTaGCTCTGTCCCCAGGACATCTTGCTTGGATTTCTTTTTATGGCC +
Preference number: 5 (lower is better)
Translates to: VDRSRHPRLDGTHCS*LCPQDILLGFLFMA
Trigger: GGCCATAAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 90 bp TCCTCGGTGGATCGTTCCAGACATCCCAGATTGGATGGAACTCATTaGTCTTGCCTCTGTCCCCAGGACATCTTGCTTGGATTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SSVDRSRHPRLDGTH*SCLCPQDILLGFLF
Trigger: AAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCACCGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 72 bp CGGCAGACCTGGAGACCCGGGCACGGAGGTCGTGGCTaGCGCCTCCTCACCCCCGGCGGCGAGTGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: RQTWRPGHGGRG*RLLTPGGEWSR
Trigger: GCGGCTCCACTCGCCGCCGGGGGTGAGGAGGCGGCAGCCACGACCTCCGTGCCCGGGTCTCCAGGTCTGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485583.1
CDS CCA 72 bp TCCCCGGCAGACCTGGAGACCCGGGCACGGAGGTCGTaGCTGCCGCCTCCTCACCCCCGGCGGCGAGTGGAG +
Preference number: 6 (lower is better)
Translates to: SPADLETRARRS*LPPPHPRRRVE
Trigger: CTCCACTCGCCGCCGGGGGTGAGGAGGCGGCAGCCACGACCTCCGTGCCCGGGTCTCCAGGTCTGCCGGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485583.1
CDS GCA 72 bp CGGTGGCCACGGCCTCCTCTAGGGCCCGCTCTGCACTaGGTCTCCCCGGCAGACCTGGAGACCCGGGCACGG +
Preference number: 6 (lower is better)
Translates to: RWPRPPLGPALH*VSPADLETRAR
Trigger: CCGTGCCCGGGTCTCCAGGTCTGCCGGGGAGACGCAGTGCAGAGCGGGCCCTAGAGGAGGCCGTGGCCACCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485583.1
CDS TCA 72 bp AGCGCGGCCGTAGCTGGTTGGCCAGCTGGCACAGGATaGCCCCACTGGCCAGAGCCTCGGCCAGGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: SAAVAGWPAGTG*PHWPEPRPGPQ
Trigger: CTGAGGACCTGGCCGAGGCTCTGGCCAGTGGGGTCATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000476881.2
ENST00000485554.5
ENST00000497245.2
CDS CCA 72 bp GGCACATGGATGAAGGGCACGGAGCGCGGCCGTAGCTaGTTGGCCAGCTGGCACAGGATGACCCCACTGGCC +
Preference number: 6 (lower is better)
Translates to: GTWMKGTERGRS*LASWHRMTPLA
Trigger: GGCCAGTGGGGTCATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTCCGTGCCCTTCATCCATGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000476881.2
ENST00000485554.5
ENST00000497245.2
CDS TCA 72 bp AAACCGGTTCCGGGACAGGTCAGCCTGGGTGATGTCTaGCAGGTCGTAGCTACGGGCCGCGCCCCGGGGGAA +
Preference number: 6 (lower is better)
Translates to: KPVPGQVSLGDV*QVVATGRAPGE
Trigger: TTCCCCCGGGGCGCGGCCCGTAGCTACGACCTGTCAGACATCACCCAGGCTGACCTGTCCCGGAACCGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310300.11
ENST00000485583.1
CDS CCA 72 bp GACATGCAACCAGGGCTGCAGATGTTGAGCGGATTGTaGCCGCCCGGGAGTCCCCTTTCCCCAGCACGGGCC +
Preference number: 6 (lower is better)
Translates to: DMQPGLQMLSGL*PPGSPLSPARA
Trigger: GGCCCGTGCTGGGGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp GTGGGAGGATCGGGCAGTGGCGTCAGTTTGGGGGCTTaGGGTACCTGCTGCTTGGTGCCCTCTCCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: VGGSGSGVSLGA*GTCCLVPSPCP
Trigger: GGGACAGGGAGAGGGCACCAAGCAGCAGGTACCCCAAGCCCCCAAACTGACGCCACTGCCCGATCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498539.1
CDS CCA 72 bp GGCACATGGATGAAGGGCACGGAGCGCGGCCGTAGCTaGTTGGCCAGCTGGCACAGGATGACCACTGGCCAG +
Preference number: 6 (lower is better)
Translates to: GTWMKGTERGRS*LASWHRMTTGQ
Trigger: CTGGCCAGTGGTCATCCTGTGCCAGCTGGCCAACCAGCTACGGCCGCGCTCCGTGCCCTTCATCCATGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619071.4
CDS CAA 72 bp GGTGGGAGGATCGGGCAGTGGCGTCAGTTTGGGGGCTaGGGGTACCTGCTGCTTGGTGCCCTCTCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: GGRIGQWRQFGG*GYLLLGALSLS
Trigger: GGACAGGGAGAGGGCACCAAGCAGCAGGTACCCCAAGCCCCCAAACTGACGCCACTGCCCGATCCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498539.1
CDS GCA 72 bp GTCCCCTTTCCCCAGCACGGGCCCAGCACTGCACCCTaGATGAAATGCTGCCTGCCCACAGGGAAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: VPFPQHGPSTAP*MKCCLPTGKGA
Trigger: GGCACCTTTCCCTGTGGGCAGGCAGCATTTCATGCAGGGTGCAGTGCTGGGCCCGTGCTGGGGAAAGGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp GGGAGGTCCCCCAGCTCTTCGGGCAGCGTACTGAGCTaGTTCCTCCGGACATTGAGGTCCCGCAGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GRSPSSSGSVLS*FLRTLRSRREE
Trigger: CTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACCAGCTCAGTACGCTGCCCGAAGAGCTGGGGGACCTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310300.11
ENST00000497245.2
ENST00000619071.4
CDS CAA 90 bp TCCCCCAGCTCTTCGGGCAGCGTACTGAGCTGGTTCCTCCGGACATaGAGGTCCCGCAGGGAAGAGAGGCCACACAGTTCCGAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SPSSSGSVLSWFLRT*RSRREERPHSSEGR
Trigger: CCTGCCCTCGGAACTGTGTGGCCTCTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACCAGCTCAGTACGCTGCCCGAAGAGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310300.11
ENST00000497245.2
ENST00000619071.4
CDS CAA 90 bp AACACCTCCTGTGACATGCAACCAGGGCTGCAGATGTTGAGCGGATaGTGGCCGCCCGGGAGTCCCCTTTCCCCAGCACGGGCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: NTSCDMQPGLQMLSG*WPPGSPLSPARAQH
Trigger: GTGCTGGGCCCGTGCTGGGGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS TCA 72 bp AGGGGATGCTGGCAGGAAACCTACTTGTGCATGGCTTaGGTGGACACGGCGGCGGCCCCTCCCACAACAGCC +
Preference number: 6 (lower is better)
Translates to: RGCWQETYLCMA*VDTAAAPPTTA
Trigger: GGCTGTTGTGGGAGGGGCCGCCGCCGTGTCCACTCAAGCCATGCACAAGTAGGTTTCCTGCCAGCATCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498539.1
CDS GCA 72 bp TGCTGCTCACGTCAAGCTGTCGCAGGCTTCCCAGGGTaGCGATGTCAGGGGGCAGGGCTCCCAGCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: CCSRQAVAGFPG*RCQGAGLPACC
Trigger: ACAACAAGCTGGGAGCCCTGCCCCCTGACATCGGCACCCTGGGAAGCCTGCGACAGCTTGACGTGAGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000497245.2
ENST00000619071.4
CDS GCA 72 bp GGCCACACAGTTCCGAGGGCAGGGATTGGAGCTCGTTaGTGCTCACGTCAAGCTGTCGCAGGCTTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GHTVPRAGIGAR*CSRQAVAGFPG
Trigger: CCCTGGGAAGCCTGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGAACTGTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000497245.2
ENST00000619071.4
CDS CAA 72 bp TGTGACATGCAACCAGGGCTGCAGATGTTGAGCGGATaGTGGCCGCCCGGGAGTCCCCTTTCCCCAGCACGG +
Preference number: 6 (lower is better)
Translates to: CDMQPGLQMLSG*WPPGSPLSPAR
Trigger: CCGTGCTGGGGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 72 bp GAGGGGATGCTGGCAGGAAACCTACTTGTGCATGGCTaGAGTGGACACGGCGGCGGCCCCTCCCACAACAGC +
Preference number: 6 (lower is better)
Translates to: EGMLAGNLLVHG*SGHGGGPSHNS
Trigger: GCTGTTGTGGGAGGGGCCGCCGCCGTGTCCACTCAAGCCATGCACAAGTAGGTTTCCTGCCAGCATCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498539.1
CDS CAA 90 bp GAGGTCCCGCAGGGAAGAGAGGCCACACAGTTCCGAGGGCAGGGATaGGAGCTCGTTGCTGCTCACGTCAAGCTGTCGCAGGCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: EVPQGREATQFRGQG*ELVAAHVKLSQASQ
Trigger: CTGGGAAGCCTGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGAACTGTGTGGCCTCTCTTCCCTGCGGGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000497245.2
ENST00000619071.4
CDS CAA 90 bp CCCCACCCCCTACCATCCACAGACACCAGGGTGGAGGGTGCATGGTaGGACAGATCCTGCGGGTGGAGGCGTGGAAGGACAGTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: PHPLPSTDTRVEGAW*DRSCGWRRGRTVSS
Trigger: GCTAGAGACTGTCCTTCCACGCCTCCACCCGCAGGATCTGTCCAACCATGCACCCTCCACCCTGGTGTCTGTGGATGGTAGGGGGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497245.2
CDS CAA 90 bp CCCTGTTCAAACACCTCCTGTGACATGCAACCAGGGCTGCAGATGTaGAGCGGATTGTGGCCGCCCGGGAGTCCCCTTTCCCCAGCACGG +
Preference number: 6 (lower is better)
Translates to: PCSNTSCDMQPGLQM*SGLWPPGSPLSPAR
Trigger: CCGTGCTGGGGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGTGTTTGAACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS TCA 72 bp ACACCTCCTGTGACATGCAACCAGGGCTGCAGATGTTaGGCGGATTGTGGCCGCCCGGGAGTCCCCTTTCCC +
Preference number: 6 (lower is better)
Translates to: TPPVTCNQGCRC*ADCGRPGVPFP
Trigger: GGGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 72 bp CCCCAGCACGGGCCCAGCACTGCACCCTGCATGAAATaGTGCCTGCCCACAGGGAAAGGTGCCTTTTGCTCA +
Preference number: 6 (lower is better)
Translates to: PQHGPSTAPCMK*CLPTGKGAFCS
Trigger: TGAGCAAAAGGCACCTTTCCCTGTGGGCAGGCAGCATTTCATGCAGGGTGCAGTGCTGGGCCCGTGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp CGTACCGATGTCCCGGAAATAGATCCTCTGCAGGGCTaGGGCCAGCCAGGCGGATCTGGTCAGCCTGATGCT +
Preference number: 6 (lower is better)
Translates to: RTDVPEIDPLQG*GQPGGSGQPDA
Trigger: AGCATCAGGCTGACCAGATCCGCCTGGCTGGCCCCAGCCCTGCAGAGGATCTATTTCCGGGACATCGGTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS CCA 72 bp AGGGTGGAGGGTGCATGGTTGGACAGATCCTGCGGGTaGAGGCGTGGAAGGACAGTCTCTAGCTGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: RVEGAWLDRSCG*RRGRTVSSWPA
Trigger: TGCTGGCCAGCTAGAGACTGTCCTTCCACGCCTCCACCCGCAGGATCTGTCCAACCATGCACCCTCCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497245.2
CDS CAA 72 bp AGGCCACACAGTTCCGAGGGCAGGGATTGGAGCTCGTaGCTGCTCACGTCAAGCTGTCGCAGGCTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: RPHSSEGRDWSS*LLTSSCRRLPR
Trigger: CCTGGGAAGCCTGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGAACTGTGTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000497245.2
ENST00000619071.4
CDS CAA 90 bp TTCTTCTCACCTTCGGGCAGCGTACTGAGCTGGTTCCTCCGGACATaGAGGTCCCGCAGGGAAGAGAGGCCACACAGTTCCGAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FFSPSGSVLSWFLRT*RSRREERPHSSEGR
Trigger: CCTGCCCTCGGAACTGTGTGGCCTCTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACCAGCTCAGTACGCTGCCCGAAGGTGAGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470184.1
CDS TCA 72 bp CACATGATTCTGGTCCACGGTCTAAGCGAGCCTCCCTaGGAGGGCCCATCTGGACGTCAGCTCAGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: HMILVHGLSEPP*EGPSGRQLSFP
Trigger: GGGGAAGCTGAGCTGACGTCCAGATGGGCCCTCTCAGGGAGGCTCGCTTAGACCGTGGACCAGAATCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 72 bp TGCAGAGGGTTGCTGTCCAGCAGAATGACCTGCAGGTaGCTCAGGCGGCAGAAGGAGACTGGGATTCGGGAG +
Preference number: 6 (lower is better)
Translates to: CRGLLSSRMTCR*LRRQKETGIRE
Trigger: CTCCCGAATCCCAGTCTCCTTCTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000487697.1
ENST00000497245.2
ENST00000619071.4
CDS GCA 72 bp TCCTCCCCGGGGACATGGCTGTCGATGAAGTCAATCTaGACAGGGTCTCCGTCCGCTGAGCCATCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SSPGTWLSMKSI*TGSPSAEPSSL
Trigger: CAAGGAGGATGGCTCAGCGGACGGAGACCCTGTGCAGATTGACTTCATCGACAGCCATGTCCCCGGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000497245.2
ENST00000498539.1
ENST00000619071.4
CDS CCA 72 bp AGGGAAGAGAGGCCACACAGTTCCGAGGGCAGGGATTaGAGCTCGTTGCTGCTCACGTCAAGCTGTCGCAGG +
Preference number: 6 (lower is better)
Translates to: REERPHSSEGRD*SSLLLTSSCRR
Trigger: CCTGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGAACTGTGTGGCCTCTCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000497245.2
ENST00000619071.4
CDS CCA 72 bp TGGGCAAGGGAAAAGTCAGGAACATGCTCAGGGCTGTaGCCTCGTGCTCACTCCCTCACCCTTGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: WAREKSGTCSGL*PRAHSLTLGSS
Trigger: GCTGGAGCCAAGGGTGAGGGAGTGAGCACGAGGCCACAGCCCTGAGCATGTTCCTGACTTTTCCCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp GAAGAGGAAGCTGTTTGGTCTCTGAATGGAGCCAAGTaGCCGTGGAGCAGGTGCTGTCGCTGGGGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: EEEAVWSLNGAK*PWSRCCRWGRN
Trigger: GTTCCGGCCCCAGCGACAGCACCTGCTCCACGGCCACTTGGCTCCATTCAGAGACCAAACAGCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467201.5
ENST00000476881.2
ENST00000490359.2
CDS CCA 72 bp CCACTGCTCACCACTGACTCTGTAGCTGGGTCCCAGTaGCCTGGCACCTACACCTCCTGCCTCTCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: PLLTTDSVAGSQ*PGTYTSCLSAC
Trigger: ACAAGCAGAGAGGCAGGAGGTGTAGGTGCCAGGCCACTGGGACCCAGCTACAGAGTCAGTGGTGAGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476881.2
CDS CAA 72 bp CAGGGAAGAGAGGCCACACAGTTCCGAGGGCAGGGATaGGAGCTCGTTGCTGCTCACGTCAAGCTGTCGCAG +
Preference number: 6 (lower is better)
Translates to: QGREATQFRGQG*ELVAAHVKLSQ
Trigger: CTGCGACAGCTTGACGTGAGCAGCAACGAGCTCCAATCCCTGCCCTCGGAACTGTGTGGCCTCTCTTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000497245.2
ENST00000619071.4
CDS CAA 72 bp TTCAGGCAGACCTGGGCAGGTGGACTCTGCAGAGGGTaGCTGTCCAGCAGAATGACCTGCAGGTGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: FRQTWAGGLCRG*LSSRMTCRCLR
Trigger: CCTGAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCCACCTGCCCAGGTCTGCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000487697.1
ENST00000497245.2
ENST00000619071.4
CDS CAA 72 bp AACACCTCCTGTGACATGCAACCAGGGCTGCAGATGTaGAGCGGATTGTGGCCGCCCGGGAGTCCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: NTSCDMQPGLQM*SGLWPPGSPLS
Trigger: GGAAAGGGGACTCCCGGGCGGCCACAATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 72 bp GGACTCTGCAGAGGGTTGCTGTCCAGCAGAATGACCTaGAGGTGCCTCAGGCGGCAGAAGGAGACTGGGATT +
Preference number: 6 (lower is better)
Translates to: GLCRGLLSSRMT*RCLRRQKETGI
Trigger: AATCCCAGTCTCCTTCTGCCGCCTGAGGCACCTGCAGGTCATTCTGCTGGACAGCAACCCTCTGCAGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000487697.1
ENST00000497245.2
ENST00000619071.4
CDS GCA 72 bp CTGCCATGCCTGGCTCACCTTCCTAACCCCATGCTTTaGACATGCTGGGTCCTCTGCCTGGATGCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: LPCLAHLPNPML*TCWVLCLDAEG
Trigger: GCCTTCTGCATCCAGGCAGAGGACCCAGCATGTGCAAAGCATGGGGTTAGGAAGGTGAGCCAGGCATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp TCCACAGTGCCTCGCTCTTCATCCTCCCCGGGGACATaGCTGTCGATGAAGTCAATCTGCACAGGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: STVPRSSSSPGT*LSMKSICTGSP
Trigger: CGGAGACCCTGTGCAGATTGACTTCATCGACAGCCATGTCCCCGGGGAGGATGAAGAGCGAGGCACTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310300.11
ENST00000467201.5
ENST00000497245.2
ENST00000498539.1
ENST00000619071.4
CDS TCA 72 bp CCGACCCACGCTGCCCGGCCTCTGTGGACAAATACTTaGAGATGTGAAGTTTCCCCTTCAGGCAGACCTGGG +
Preference number: 6 (lower is better)
Translates to: PTHAARPLWTNT*RCEVSPSGRPG
Trigger: CCCAGGTCTGCCTGAAGGGGAAACTTCACATCTTCAAGTATTTGTCCACAGAGGCCGGGCAGCGTGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000487697.1
ENST00000497245.2
ENST00000619071.4
CDS CCA 72 bp GAAGCTGTTTGGTCTCTGAATGGAGCCAAGTGGCCGTaGAGCAGGTGCTGTCGCTGGTCCAGCTATGGGAAG +
Preference number: 6 (lower is better)
Translates to: EAVWSLNGAKWP*SRCCRWSSYGK
Trigger: CTTCCCATAGCTGGACCAGCGACAGCACCTGCTCCACGGCCACTTGGCTCCATTCAGAGACCAAACAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000485554.5
ENST00000497245.2
ENST00000619071.4
CDS CCA 72 bp TGCACATGCTGGGTCCTCTGCCTGGATGCAGAAGGCTaGGGAATTCTCCTTCAATGTTCGGCTCCCACTGCG +
Preference number: 6 (lower is better)
Translates to: CTCWVLCLDAEG*GILLQCSAPTA
Trigger: CGCAGTGGGAGCCGAACATTGAAGGAGAATTCCCCAGCCTTCTGCATCCAGGCAGAGGACCCAGCATGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp TATGGCCCAGAGAGAGCCCTTCCTACCCCTTTTGACTaGGAAGGAAGAGGGCAGGTGCAGAAAGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: YGPERALPTPFD*EGRGQVQKGSG
Trigger: CCCTGACCCTTTCTGCACCTGCCCTCTTCCTTCCCAGTCAAAAGGGGTAGGAAGGGCTCTCTCTGGGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp AGGTGCTCTCCCAGGGCTGACACCCTCAATCACCCATaGACAGGACGCCCTTACCTCATTTCCAGACCACCT +
Preference number: 6 (lower is better)
Translates to: RCSPRADTLNHP*TGRPYLISRPP
Trigger: AGGTGGTCTGGAAATGAGGTAAGGGCGTCCTGTCCATGGGTGATTGAGGGTGTCAGCCCTGGGAGAGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS CAA 72 bp CCGGGCCCTCAGCTTCTGAGCCTTCCCAGGTGCTGTTaGCTCAGCTGGGAGAACTCCATTTTCCCCATCCAT +
Preference number: 6 (lower is better)
Translates to: PGPQLLSLPRCC*LSWENSIFPIH
Trigger: ATGGATGGGGAAAATGGAGTTCTCCCAGCTGAGCAAACAGCACCTGGGAAGGCTCAGAAGCTGAGGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 90 bp ATCACCCATGGACAGGACGCCCTTACCTCATTTCCAGACCACCTCTaGCTGCCACTATCAACGCTGTGGAAGCCTGAGTCCAGCCCACCA +
Preference number: 6 (lower is better)
Translates to: ITHGQDALTSFPDHL*LPLSTLWKPESSPP
Trigger: TGGTGGGCTGGACTCAGGCTTCCACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAAATGAGGTAAGGGCGTCCTGTCCATGGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS TCA 72 bp CCGACCCACGCTGCCCGGCCTCTGTGGACAAATACTTaGAGATGTGAAGTTTCCCCTTCAGGCAGACCTGTG +
Preference number: 6 (lower is better)
Translates to: PTHAARPLWTNT*RCEVSPSGRPV
Trigger: CACAGGTCTGCCTGAAGGGGAAACTTCACATCTTCAAGTATTTGTCCACAGAGGCCGGGCAGCGTGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp GAAGAGGAAGCTGTTTGGTCTCTGAATGGAGCCAAGTaGCCGTGGAGCAGGTGCTGTCGCTGGTCCAGCTAT +
Preference number: 6 (lower is better)
Translates to: EEEAVWSLNGAK*PWSRCCRWSSY
Trigger: ATAGCTGGACCAGCGACAGCACCTGCTCCACGGCCACTTGGCTCCATTCAGAGACCAAACAGCTTCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000485554.5
ENST00000497245.2
ENST00000619071.4
CDS CCA 72 bp TCTTCATTCTTCTCACCTTCGGGCAGCGTACTGAGCTaGTTCCTCCGGACATTGAGGTCCCGCAGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: SSFFSPSGSVLS*FLRTLRSRREE
Trigger: CTCTTCCCTGCGGGACCTCAATGTCCGGAGGAACCAGCTCAGTACGCTGCCCGAAGGTGAGAAGAATGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470184.1
CDS CAA 72 bp GGACAGGACGCCCTTACCTCATTTCCAGACCACCTCTaGCTGCCACTATCAACGCTGTGGAAGCCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: GQDALTSFPDHL*LPLSTLWKPES
Trigger: GGACTCAGGCTTCCACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAAATGAGGTAAGGGCGTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS TCA 72 bp AGCTACCCGGTCTGCAGTGTTTTCGTTACCGCAGCCTaGGCCAACTGGGACGCACATACAAACACCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SYPVCSVFVTAA*ANWDAHTNTSS
Trigger: AGAGGAGGTGTTTGTATGTGCGTCCCAGTTGGCTCAGGCTGCGGTAACGAAAACACTGCAGACCGGGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470184.1
CDS GCA 72 bp AGTTCACACTTGAGCATGGCACAGGCCTTCCTGCCATaGCTGGCTCACCTTCCTAACCCCATGCTTTGCACA +
Preference number: 6 (lower is better)
Translates to: SSHLSMAQAFLP*LAHLPNPMLCT
Trigger: TGTGCAAAGCATGGGGTTAGGAAGGTGAGCCAGGCATGGCAGGAAGGCCTGTGCCATGCTCAAGTGTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 72 bp GACAGGACGCCCTTACCTCATTTCCAGACCACCTCTTaGTGCCACTATCAACGCTGTGGAAGCCTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: DRTPLPHFQTTS*CHYQRCGSLSP
Trigger: TGGACTCAGGCTTCCACAGCGTTGATAGTGGCAGCAAGAGGTGGTCTGGAAATGAGGTAAGGGCGTCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467201.5
ENST00000487697.1
CDS CCA 72 bp GTTGAGGTAGGTGAGGGCTGTGAGATTCCCCAAGGCTaGGTTCAGGCATCTCAGGCAATTGTGGTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VEVGEGCEIPQG*VQASQAIVVEA
Trigger: AGCCTCTACCACAATTGCCTGAGATGCCTGAACCCAGCCTTGGGGAATCTCACAGCCCTCACCTACCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310300.11
ENST00000470184.1
ENST00000485583.1
ENST00000497245.2
CDS GCA 72 bp CTTCCTAACCCCATGCTTTGCACATGCTGGGTCCTCTaGCTGGATGCAGAAGGCTGGGGAATTCTCCTTCAA +
Preference number: 6 (lower is better)
Translates to: LPNPMLCTCWVL*LDAEGWGILLQ
Trigger: TTGAAGGAGAATTCCCCAGCCTTCTGCATCCAGGCAGAGGACCCAGCATGTGCAAAGCATGGGGTTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp CTCCTCGGTGGATCGTTCCAGACATCCCAGATTGGATaGAACTCATTGCTCTTGCCTCTGTCCCCAGGACAT +
Preference number: 6 (lower is better)
Translates to: LLGGSFQTSQIG*NSLLLPLSPGH
Trigger: ATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCACCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 90 bp TCAAGCATCACCACCTCCTCGGTGGATCGTTCCAGACATCCCAGATaGGATGGAACTCATTGCTCTTGCCTCTGTCCCCAGGACATCTTG +
Preference number: 6 (lower is better)
Translates to: SSITTSSVDRSRHPR*DGTHCSCLCPQDIL
Trigger: CAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCACCGAGGAGGTGGTGATGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS TCA 72 bp CAGCACAAGGCACAAACCCTGTTCAAACACCTCCTGTaGCATGCAACCAGGGCTGCAGATGTTGAGCGGATT +
Preference number: 6 (lower is better)
Translates to: QHKAQTLFKHLL*HATRAADVERI
Trigger: AATCCGCTCAACATCTGCAGCCCTGGTTGCATGTCACAGGAGGTGTTTGAACAGGGTTTGTGCCTTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 72 bp GGATCGTTCCAGACATCCCAGATTGGATGGAACTCATaGCTCTTGCCTCTGTCCCCAGGACATCTTGCTTGG +
Preference number: 6 (lower is better)
Translates to: GSFQTSQIGWNS*LLPLSPGHLAW
Trigger: CCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 72 bp GATCGTTCCAGACATCCCAGATTGGATGGAACTCATTaGTCTTGCCTCTGTCCCCAGGACATCTTGCTTGGA +
Preference number: 6 (lower is better)
Translates to: DRSRHPRLDGTH*SCLCPQDILLG
Trigger: TCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS GCA 72 bp ACCCTGCATGAAATGCTGCCTGCCCACAGGGAAAGGTaGCTTTTGCTCATCTTAAAAAGGCACAGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: TLHEMLPAHRER*LLLILKRHSLG
Trigger: TCCCAGACTGTGCCTTTTTAAGATGAGCAAAAGGCACCTTTCCCTGTGGGCAGGCAGCATTTCATGCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 72 bp CTCATTGCTCTTGCCTCTGTCCCCAGGACATCTTGCTaGGATTTCTTTTTATGGCCCAGAGAGAGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: LIALASVPRTSC*DFFLWPRESPS
Trigger: GGAAGGGCTCTCTCTGGGCCATAAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 72 bp GGAACTCATTGCTCTTGCCTCTGTCCCCAGGACATCTaGCTTGGATTTCTTTTTATGGCCCAGAGAGAGCCC +
Preference number: 6 (lower is better)
Translates to: GTHCSCLCPQDI*LGFLFMAQREP
Trigger: GGGCTCTCTCTGGGCCATAAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 90 bp AGATTGGATGGAACTCATTGCTCTTGCCTCTGTCCCCAGGACATCTaGCTTGGATTTCTTTTTATGGCCCAGAGAGAGCCCTTCCTACCC +
Preference number: 6 (lower is better)
Translates to: RLDGTHCSCLCPQDI*LGFLFMAQREPFLP
Trigger: GGGTAGGAAGGGCTCTCTCTGGGCCATAAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 90 bp CTCCTCGGTGGATCGTTCCAGACATCCCAGATTGGATGGAACTCATaGCTCTTGCCTCTGTCCCCAGGACATCTTGCTTGGATTTCTTTT +
Preference number: 6 (lower is better)
Translates to: LLGGSFQTSQIGWNS*LLPLSPGHLAWISF
Trigger: AAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCACCGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CCA 72 bp TCATTGCTCTTGCCTCTGTCCCCAGGACATCTTGCTTaGATTTCTTTTTATGGCCCAGAGAGAGCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: SLLLPLSPGHLA*ISFYGPERALP
Trigger: AGGAAGGGCTCTCTCTGGGCCATAAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5
CDS CAA 90 bp GGTGGATCGTTCCAGACATCCCAGATTGGATGGAACTCATTGCTCTaGCCTCTGTCCCCAGGACATCTTGCTTGGATTTCTTTTTATGGC +
Preference number: 6 (lower is better)
Translates to: GGSFQTSQIGWNSLL*PLSPGHLAWISFYG
Trigger: GCCATAAAAAGAAATCCAAGCAAGATGTCCTGGGGACAGAGGCAAGAGCAATGAGTTCCATCCAATCTGGGATGTCTGGAACGATCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467201.5