RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPP (Homo sapiens)

Ensembl gene IDs: ENSG00000145012

Ensembl transcript IDs: ENST00000414139.5, ENST00000415906.1, ENST00000416784.5, ENST00000420410.5, ENST00000426274.5, ENST00000430340.5, ENST00000443217.5, ENST00000448637.5, ENST00000454789.5, ENST00000457242.1, ENST00000459897.1, ENST00000462758.1, ENST00000471917.1, ENST00000474472.5, ENST00000483938.1, ENST00000484468.1, ENST00000487347.1, ENST00000494044.1, ENST00000494233.5, ENST00000617246.4, ENST00000617246.5, ENST00000618621.4, ENST00000640853.1

Found 1574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCTTTCGCCCAGGCCGGACTGCAGTGGCGCTATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: ALSPRPDCSGAISAH*KLRFPGSRHSPASA
Trigger: GGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTTCAGTGAGCCGAGATAGCGCCACTGCAGTCCGGCCTGGGCGAAAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp AGGTGGCACATATACACCATGGAGGTGAGGCACTTTTCTAGTCTGTaGACGTGCATCTCAACCAAAGCCACCACTCTCCCGCTCCCATTA +
Preference number: 1 (lower is better)
Translates to: RWHIYTMEVRHFSSL*TCISTKATTLPLPL
Trigger: TAATGGGAGCGGGAGAGTGGTGGCTTTGGTTGAGATGCACGTTCACAGACTAGAAAAGTGCCTCACCTCCATGGTGTATATGTGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TCTAAGGTGTTCTCAGCTGTGAGCGTGGCTACTTGGAGACAGCACTaGACTTGCAAGACCTGGTTATATCCCCAAATCTGCCACTTCCCA +
Preference number: 1 (lower is better)
Translates to: SKVFSAVSVATWRQH*TCKTWLYPQICHFP
Trigger: TGGGAAGTGGCAGATTTGGGGATATAACCAGGTCTTGCAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp AGAAAGTTACCTCCAGGTCCTGCCCAGGAGACTGATGGCAGTTTCTaGTTACAGTGCTCTCTCATTCAAAGTTGGGGTAGAAGAAGCCAC +
Preference number: 1 (lower is better)
Translates to: RKLPPGPAQETDGSF*LQCSLIQSWGRRSH
Trigger: GTGGCTTCTTCTACCCCAACTTTGAATGAGAGAGCACTGTAAGCAGAAACTGCCATCAGTCTCCTGGGCAGGACCTGGAGGTAACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp TCATGCACTGTCTACCTCGTCCTATTTACATGGACCCTCTCCTATTaGCACCTCTGGGTAAGAATGCATCACTCTAGGCTATGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SCTVYLVLFTWTLSY*HLWVRMHHSRLCCC
Trigger: GCAGCAGCATAGCCTAGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAGGTAGACAGTGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp GTCTACCTCGTCCTATTTACATGGACCCTCTCCTATTGCCACCTCTaGGTAAGAATGCATCACTCTAGGCTATGCTGCTGCTCCATCAAC +
Preference number: 1 (lower is better)
Translates to: VYLVLFTWTLSYCHL*VRMHHSRLCCCSIN
Trigger: GTTGATGGAGCAGCAGCATAGCCTAGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAGGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp ACAGAAAGGAAGAGAAGACTTTATCGCTCTTGGGTCAGGCCCTGCTaGTGCAAACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGC +
Preference number: 1 (lower is better)
Translates to: TERKRRLYRSWVRPC*CKHTAMYSFRSSSG
Trigger: GCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGTTTGCATCAGCAGGGCCTGACCCAAGAGCGATAAAGTCTTCTCTTCCTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR TCA 90 bp TCTCCCACGAGAGTGCACCAAACGAGCGATCCCAAGAAATGGACTTaGGGCACATTTTGCAGAGGTGTCTTTTTCAGTTTGCTGGTTTCC +
Preference number: 1 (lower is better)
Translates to: SPTRVHQTSDPKKWT*GTFCRGVFFSLLVS
Trigger: GGAAACCAGCAAACTGAAAAAGACACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp GGATGCTCAGGGAATGTGTTTGCAGCCCGTTTCACGGTAGCCGCTTaGGAGGGGATATTGGAAGTGAGTGACTTTCTTTCATTTGGCAAA +
Preference number: 1 (lower is better)
Translates to: GCSGNVFAARFTVAA*EGILEVSDFLSFGK
Trigger: TTTGCCAAATGAAAGAAAGTCACTCACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAAACGGGCTGCAAACACATTCCCTGAGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp AAGACTTTATCGCTCTTGGGTCAGGCCCTGCTGATGCAAACACACTaGTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTC +
Preference number: 1 (lower is better)
Translates to: KTLSLLGQALLMQTH*YVFFPLILRQTYGL
Trigger: GAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGTTTGCATCAGCAGGGCCTGACCCAAGAGCGATAAAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CCA 90 bp TCGATATTGTCCTCTAAGGTGTTCTCAGCTGTGAGCGTGGCTACTTaGAGACAGCACTGGACTTGCAAGACCTGGTTATATCCCCAAATC +
Preference number: 1 (lower is better)
Translates to: SILSSKVFSAVSVAT*RQHWTCKTWLYPQI
Trigger: GATTTGGGGATATAACCAGGTCTTGCAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCTTAGAGGACAATATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp AGTCTCGCAAAGAGGCCGGAGTCGGCAAATGGCTATATTCAGAGCTaGGGAAGTCTTGCCAACTTAACTGTAGCTGTTAAAAAGGCAGAC +
Preference number: 1 (lower is better)
Translates to: SLAKRPESANGYIQS*GSLANLTVAVKKAD
Trigger: GTCTGCCTTTTTAACAGCTACAGTTAAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGCCTCTTTGCGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp ATCACAGATTTGAGTCAGTCTCGCAAAGAGGCCGGAGTCGGCAAATaGCTATATTCAGAGCTGGGGAAGTCTTGCCAACTTAACTGTAGC +
Preference number: 1 (lower is better)
Translates to: ITDLSQSRKEAGVGK*LYSELGKSCQLNCS
Trigger: GCTACAGTTAAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGCCTCTTTGCGAGACTGACTCAAATCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp GCTGTTCCAACCTCACCCGTAGCTTATGTAATGGGGCTCCTTATATaGAAAAGAGAATGGTGGCTGACTGCAATGGCATGGAGTCCATCT +
Preference number: 1 (lower is better)
Translates to: AVPTSPVAYVMGLLI*KREWWLTAMAWSPS
Trigger: AGATGGACTCCATGCCATTGCAGTCAGCCACCATTCTCTTTTCCATATAAGGAGCCCCATTACATAAGCTACGGGTGAGGTTGGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp TATTTTACAGCTCAGAAAGTTACCTCCAGGTCCTGCCCAGGAGACTaGTGGCAGTTTCTGCTTACAGTGCTCTCTCATTCAAAGTTGGGG +
Preference number: 1 (lower is better)
Translates to: YFTAQKVTSRSCPGD*WQFLLTVLSHSKLG
Trigger: CCCCAACTTTGAATGAGAGAGCACTGTAAGCAGAAACTGCCATCAGTCTCCTGGGCAGGACCTGGAGGTAACTTTCTGAGCTGTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp AATATAAAGAAGCTGTATCAGCAAGGGATGCTCAGGGAATGTGTTTaGAGCCCGTTTCACGGTAGCCGCTTGAGAGGGGATATTGGAAGT +
Preference number: 1 (lower is better)
Translates to: NIKKLYQQGMLRECV*SPFHGSRLRGDIGS
Trigger: ACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAAACGGGCTGCAAACACATTCCCTGAGCATCCCTTGCTGATACAGCTTCTTTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp ACCCTTCTCCTACAATCATGCACTGTCTACCTCGTCCTATTTACATaGACCCTCTCCTATTGCCACCTCTGGGTAAGAATGCATCACTCT +
Preference number: 1 (lower is better)
Translates to: TLLLQSCTVYLVLFT*TLSYCHLWVRMHHS
Trigger: AGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAGGTAGACAGTGCATGATTGTAGGAGAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp CTAGAGGTTTCCCACAAGAAGACACAGATGTGTGCAAGCTCTAAATaGTCTCTAAAGACCGCAGTACACATGTGGATTTGCCACCTGGCA +
Preference number: 1 (lower is better)
Translates to: LEVSHKKTQMCASSK*SLKTAVHMWICHLA
Trigger: TGCCAGGTGGCAAATCCACATGTGTACTGCGGTCTTTAGAGATCATTTAGAGCTTGCACACATCTGTGTCTTCTTGTGGGAAACCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp AGAGGAAATAAAAAGTGGAAAGCACACCCTAAAGGTACAGCTTCCTaGGGGACGCAGCTCAAGAGAAGGAACACTTGCTTGCTGAACTGT +
Preference number: 1 (lower is better)
Translates to: RGNKKWKAHPKGTAS*GTQLKRRNTCLLNC
Trigger: ACAGTTCAGCAAGCAAGTGTTCCTTCTCTTGAGCTGCGTCCCTCAGGAAGCTGTACCTTTAGGGTGTGCTTTCCACTTTTTATTTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp AGCCCGTTTCACGGTAGCCGCTTGAGAGGGGATATTGGAAGTGAGTaGCTTTCTTTCATTTGGCAAAGTTTCCTTATCTCAGCACCTACT +
Preference number: 1 (lower is better)
Translates to: SPFHGSRLRGDIGSE*LSFIWQSFLISAPT
Trigger: AGTAGGTGCTGAGATAAGGAAACTTTGCCAAATGAAAGAAAGTCACTCACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAAACGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp CTCTCCTATTGCCACCTCTGGGTAAGAATGCATCACTCTAGGCTATaGTGCTGCTCCATCAACAGTATTGACAGTTTTGTCAGTGATGGA +
Preference number: 1 (lower is better)
Translates to: LSYCHLWVRMHHSRL*CCSINSIDSFVSDG
Trigger: TCCATCACTGACAAAACTGTCAATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp GAGACTGATGGCAGTTTCTGCTTACAGTGCTCTCTCATTCAAAGTTaGGGTAGAAGAAGCCACAATCATGGTCTTCCCCATGACAAAGGT +
Preference number: 1 (lower is better)
Translates to: ETDGSFCLQCSLIQS*GRRSHNHGLPHDKG
Trigger: ACCTTTGTCATGGGGAAGACCATGATTGTGGCTTCTTCTACCCCAACTTTGAATGAGAGAGCACTGTAAGCAGAAACTGCCATCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp GATACTCCTCAGTTCAGACTTCTCCATTATGCTAGAAGGATGGCATaGTCCCATGTTAGTTTCAATTTGCTGCCTACAGAGGGAGGACCA +
Preference number: 1 (lower is better)
Translates to: DTPQFRLLHYARRMA*SHVSFNLLPTEGGP
Trigger: TGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGCATAATGGAGAAGTCTGAACTGAGGAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp CTTCTCACTTTGCTGATGTGTATGCTGAACAGAAGATCACAGATTTaGGTCAGTCTCGCAAAGAGGCCGGAGTCGGCAAATGGCTATATT +
Preference number: 1 (lower is better)
Translates to: LLTLLMCMLNRRSQI*VSLAKRPESANGYI
Trigger: AATATAGCCATTTGCCGACTCCGGCCTCTTTGCGAGACTGACTCAAATCTGTGATCTTCTGTTCAGCATACACATCAGCAAAGTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp TGCTTTGCCCAAACAGAGGCATATTCAAGTGAATATGGAGCCAACTaGCTTAGAAGGAAAGGGAACGACTTGGCAAGTGTAATCTGCCAG +
Preference number: 1 (lower is better)
Translates to: CFAQTEAYSSEYGAN*LRRKGNDLASVICQ
Trigger: CTGGCAGATTACACTTGCCAAGTCGTTCCCTTTCCTTCTAAGTCAGTTGGCTCCATATTCACTTGAATATGCCTCTGTTTGGGCAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp GAGGCTTTGAGGTTACATCAGTGTTTCCCTGATCTCCCTAGCAGCTaGCATAATTTCCCCAACACCCTTCAAAACTTGATAATGGAAGGA +
Preference number: 1 (lower is better)
Translates to: EALRLHQCFPDLPSS*HNFPNTLQNLIMEG
Trigger: TCCTTCCATTATCAAGTTTTGAAGGGTGTTGGGGAAATTATGGCAGCTGCTAGGGAGATCAGGGAAACACTGATGTAACCTCAAAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp TCCTATTGCCACCTCTGGGTAAGAATGCATCACTCTAGGCTATGCTaGTGCTCCATCAACAGTATTGACAGTTTTGTCAGTGATGGAACT +
Preference number: 1 (lower is better)
Translates to: SYCHLWVRMHHSRLC*CSINSIDSFVSDGT
Trigger: AGTTCCATCACTGACAAAACTGTCAATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TCAACAAGTCAGATAAAAGGGGTGTACTGTTCATGGGTTAGTTACTaGGGAAGGCATGAAGCTACACAACAACTGTCAGAACGGTCTGTC +
Preference number: 1 (lower is better)
Translates to: STSQIKGVYCSWVSY*GRHEATQQLSERSV
Trigger: GACAGACCGTTCTGACAGTTGTTGTGTAGCTTCATGCCTTCCCCAGTAACTAACCCATGAACAGTACACCCCTTTTATCTGACTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp AGGTGCTGGAGAGGATGTGGAGAAATAAGAACACTTTTACACTGTTaGTGGGACTGTGAACTAGTTCAACCATTGTGGAAGTCAGTGTGG +
Preference number: 1 (lower is better)
Translates to: RCWRGCGEIRTLLHC*WDCELVQPLWKSVW
Trigger: CCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGTTCTTATTTCTCCACATCCTCTCCAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TCACCCGTAGCTTATGTAATGGGGCTCCTTATATGGAAAAGAGAATaGTGGCTGACTGCAATGGCATGGAGTCCATCTTCCATAGTTTGT +
Preference number: 1 (lower is better)
Translates to: SPVAYVMGLLIWKRE*WLTAMAWSPSSIVC
Trigger: ACAAACTATGGAAGATGGACTCCATGCCATTGCAGTCAGCCACCATTCTCTTTTCCATATAAGGAGCCCCATTACATAAGCTACGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp AGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTaGAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCAT +
Preference number: 1 (lower is better)
Translates to: SSVLGKRYHTGRVQS*RSSAKIWTVNTAWH
Trigger: ATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
3UTR GCA 90 bp ATAAGGCACAAGTATATGTTGTTCTCTGATTGTCTCCCACGAGAGTaGACCAAACGAGCGATCCCAAGAAATGGACTTGAGGCACATTTT +
Preference number: 1 (lower is better)
Translates to: IRHKYMLFSDCLPRE*TKRAIPRNGLEAHF
Trigger: AAAATGTGCCTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGACAATCAGAGAACAACATATACTTGTGCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp TCCATTATGCTAGAAGGATGGCATGGTCCCATGTTAGTTTCAATTTaGTGCCTACAGAGGGAGGACCAAGGCACTTTAACTATTTTTGGC +
Preference number: 1 (lower is better)
Translates to: SIMLEGWHGPMLVSI*CLQREDQGTLTIFG
Trigger: GCCAAAAATAGTTAAAGTGCCTTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGCATAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TCAGCCCTATTGTCAAATAGTCAGTGCTACTTGAGGTCATCAGCATaGTCTGGCTTCAATTTGGAAGACAGGAATTCAGAGACACAGTTG +
Preference number: 1 (lower is better)
Translates to: SALLSNSQCYLRSSA*SGFNLEDRNSETQL
Trigger: CAACTGTGTCTCTGAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAATAGGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TGTTGGTGGGACTGTGAACTAGTTCAACCATTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA +
Preference number: 1 (lower is better)
Translates to: CWWDCELVQPLWKSV*RFLRDLELEIPFDP
Trigger: TGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TGCTGGAGAGGATGTGGAGAAATAAGAACACTTTTACACTGTTGGTaGGACTGTGAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGA +
Preference number: 1 (lower is better)
Translates to: CWRGCGEIRTLLHCW*DCELVQPLWKSVWR
Trigger: TCTCCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGTTCTTATTTCTCCACATCCTCTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TCAAAGATACTCCTCAGTTCAGACTTCTCCATTATGCTAGAAGGATaGCATGGTCCCATGTTAGTTTCAATTTGCTGCCTACAGAGGGAG +
Preference number: 1 (lower is better)
Translates to: SKILLSSDFSIMLEG*HGPMLVSICCLQRE
Trigger: CTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGCATAATGGAGAAGTCTGAACTGAGGAGTATCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp TTCTTTCATTTGGCAAAGTTTCCTTATCTCAGCACCTACTCTTTCTaGTGGTATGTTTTTGAAGGCTGCACAGTACGACTCTGGGTACCG +
Preference number: 1 (lower is better)
Translates to: FFHLAKFPYLSTYSF*WYVFEGCTVRLWVP
Trigger: CGGTACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATACCATCAGAAAGAGTAGGTGCTGAGATAAGGAAACTTTGCCAAATGAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp ATGTCCTGCTTGTTCTTTTGTGGAGGGTCAAAGGACATGTACCCTTaGTGCAAGAATAGAAGATGTAGCTGTGGATCAATAAGAATGCTC +
Preference number: 1 (lower is better)
Translates to: MSCLFFCGGSKDMYP*CKNRRCSCGSIRML
Trigger: GAGCATTCTTATTGATCCACAGCTACATCTTCTATTCTTGCAGCAAGGGTACATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp ATTATGCTAGAAGGATGGCATGGTCCCATGTTAGTTTCAATTTGCTaGCTACAGAGGGAGGACCAAGGCACTTTAACTATTTTTGGCACT +
Preference number: 1 (lower is better)
Translates to: IMLEGWHGPMLVSIC*LQREDQGTLTIFGT
Trigger: AGTGCCAAAAATAGTTAAAGTGCCTTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGCATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TTTATTGCAATGTGCTTCCTTCTGCCCATTGTTTGTTCTTATCAGTaGCCTTTTCCCACCAACTTCCTCACAGTGCTGATCAGACAGAAT +
Preference number: 1 (lower is better)
Translates to: FIAMCFLLPIVCSYQ*PFPTNFLTVLIRQN
Trigger: ATTCTGTCTGATCAGCACTGTGAGGAAGTTGGTGGGAAAAGGCCACTGATAAGAACAAACAATGGGCAGAAGGAAGCACATTGCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp AGCCGATTACATTATCAGCCCTATTGTCAAATAGTCAGTGCTACTTaGGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATT +
Preference number: 1 (lower is better)
Translates to: SRLHYQPYCQIVSAT*GHQHGLASIWKTGI
Trigger: AATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAATAGGGCTGATAATGTAATCGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp GCAACTGTAACTCTCTATAGTGGTGTAGAACACAAGATGACATGGTaGTGCTTCTCTTTCTTGGTAGAACATTCCATTCGTAGGGTAGAG +
Preference number: 1 (lower is better)
Translates to: ATVTLYSGVEHKMTW*CFSFLVEHSIRRVE
Trigger: CTCTACCCTACGAATGGAATGTTCTACCAAGAAAGAGAAGCATCACCATGTCATCTTGTGTTCTACACCACTATAGAGAGTTACAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp AAAGTTTCCTTATCTCAGCACCTACTCTTTCTGATGGTATGTTTTTaGAGGCTGCACAGTACGACTCTGGGTACCGTGTGTACATACATA +
Preference number: 1 (lower is better)
Translates to: KVSLSQHLLFLMVCF*RLHSTTLGTVCTYI
Trigger: TATGTATGTACACACGGTACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATACCATCAGAAAGAGTAGGTGCTGAGATAAGGAAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp AGTTTGCTGGTTTCCCACAGATGGCTAAAGCAGGGGTATGGAACATaGTGTCATATTTCATTCATAACACACATGTACTATAGCTCTAGG +
Preference number: 1 (lower is better)
Translates to: SLLVSHRWLKQGYGT*CHISFITHMYYSSR
Trigger: CCTAGAGCTATAGTACATGTGTGTTATGAATGAAATATGACAGCATGTTCCATACCCCTGCTTTAGCCATCTGTGGGAAACCAGCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp TCCTGCTTGTTCTTTTGTGGAGGGTCAAAGGACATGTACCCTTGCTaGAAGAATAGAAGATGTAGCTGTGGATCAATAAGAATGCTCATA +
Preference number: 1 (lower is better)
Translates to: SCLFFCGGSKDMYPC*KNRRCSCGSIRMLI
Trigger: TATGAGCATTCTTATTGATCCACAGCTACATCTTCTATTCTTGCAGCAAGGGTACATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp CTTTCTAATAATGGACTCAGACTCAATAGGAAAATAGAGATGTCCTaGTTGTTCTTTTGTGGAGGGTCAAAGGACATGTACCCTTGCTGC +
Preference number: 1 (lower is better)
Translates to: LSNNGLRLNRKIEMS*LFFCGGSKDMYPCC
Trigger: GCAGCAAGGGTACATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGACATCTCTATTTTCCTATTGAGTCTGAGTCCATTATTAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp ACACTTTTACACTGTTGGTGGGACTGTGAACTAGTTCAACCATTGTaGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAAATA +
Preference number: 1 (lower is better)
Translates to: TLLHCWWDCELVQPL*KSVWRFLRDLELEI
Trigger: TATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TTACTGCTATGCCTCGGGATAAAGCACAGCAGGCACCATACAAAGTaGCAACACAATACATCAATAATGACCAAGAATAGTTCTTTACCC +
Preference number: 1 (lower is better)
Translates to: LLLCLGIKHSRHHTK*QHNTSIMTKNSSLP
Trigger: GGGTAAAGAACTATTCTTGGTCATTATTGATGTATTGTGTTGCCACTTTGTATGGTGCCTGCTGTGCTTTATCCCGAGGCATAGCAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp GTTATAAGAATGCATAATAAAGATTGTAAGCAAGCAGTATTCTGCTaGCGATGCCACAGGGATGGGTCTGTGACAGCATTTTCTTACAGC +
Preference number: 1 (lower is better)
Translates to: VIRMHNKDCKQAVFC*RCHRDGSVTAFSYS
Trigger: GCTGTAAGAAAATGCTGTCACAGACCCATCCCTGTGGCATCGTCAGCAGAATACTGCTTGCTTACAATCTTTATTATGCATTCTTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp TCAAAACTTGATAATGGAAGGATCAGGGGGCAGCCGACACAGATTTaGCAAGAGAAGCCCAAACCATATCCAATAGAAATAACACTGTTA +
Preference number: 1 (lower is better)
Translates to: SKLDNGRIRGQPTQI*QEKPKPYPIEITLL
Trigger: TAACAGTGTTATTTCTATTGGATATGGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTGCCCCCTGATCCTTCCATTATCAAGTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp GGGAGAGAGGCTTCTTTTAGGAATCGAGTCACCTCTACATGCCAATaGATTCTAAATGATATGGTCTTGGTTGATATTCTGAACCTGACA +
Preference number: 1 (lower is better)
Translates to: GREASFRNRVTSTCQ*ILNDMVLVDILNLT
Trigger: TGTCAGGTTCAGAATATCAACCAAGACCATATCATTTAGAATTCATTGGCATGTAGAGGTGACTCGATTCCTAAAAGAAGCCTCTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp AAATTCAAGCCGATTACATTATCAGCCCTATTGTCAAATAGTCAGTaGTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGAC +
Preference number: 1 (lower is better)
Translates to: KFKPITLSALLSNSQ*YLRSSAWSGFNLED
Trigger: GTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAATAGGGCTGATAATGTAATCGGCTTGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp TCTGTGATAATAAAGTTCATGGAGGGCTGCTTCCTGTCCATACTGTaGATGCTGGGTTATATTTTGGCAGATCATCTTCTCTTCCAATTA +
Preference number: 1 (lower is better)
Translates to: SVIIKFMEGCFLSIL*MLGYILADHLLFQL
Trigger: TAATTGGAAGAGAAGATGATCTGCCAAAATATAACCCAGCATGCACAGTATGGACAGGAAGCAGCCCTCCATGAACTTTATTATCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp ATTGGGAGGAAAATGGTCTTCTACCACAGAAAATGTGAAAGGCACTaGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTTTACCAAA +
Preference number: 1 (lower is better)
Translates to: IGRKMVFYHRKCERH*FKGLRFKCHQFFTK
Trigger: TTTGGTAAAGAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGAAGACCATTTTCCTCCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CCA 90 bp CTGAGAAGTGCTCAAATTGTGTCTTCTATTAATCCATTCCTGGGGTaGGAATACTCTGTCTATTCGACAAGAATCATTTTCCACTCACTG +
Preference number: 1 (lower is better)
Translates to: LRSAQIVSSINPFLG*EYSVYSTRIIFHSL
Trigger: CAGTGAGTGGAAAATGATTCTTGTCGAATAGACAGAGTATTCCCACCCCAGGAATGGATTAATAGAAGACACAATTTGAGCACTTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp GTAAATAGATTCTTTGAAAATAAGGCACAAGTATATGTTGTTCTCTaGTTGTCTCCCACGAGAGTGCACCAAACGAGCGATCCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: VNRFFENKAQVYVVL*LSPTRVHQTSDPKK
Trigger: TTTCTTGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGACAATCAGAGAACAACATATACTTGTGCCTTATTTTCAAAGAATCTATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp GCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATaGGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGT +
Preference number: 1 (lower is better)
Translates to: AHHHWPSEKCKSKPL*DTISHQLEWQSLKS
Trigger: ACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 90 bp CACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTaGCACCAATTCTTTACCAAAGTATTCCGGATGCTCCTAATAAAT +
Preference number: 1 (lower is better)
Translates to: HRKCERHWFKGLRFK*HQFFTKVFRMLLIN
Trigger: ATTTATTAGGAGCATCCGGAATACTTTGGTAAAGAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CCA 90 bp TCCAAAGCTAATCTCCACCATAAACACTCTTCTAAATATGTAGCCTaGCTAGCTTTCCCCATCTTTTACAGTGTGGTGTGTAAATGTACA +
Preference number: 1 (lower is better)
Translates to: SKANLHHKHSSKYVA*LAFPIFYSVVCKCT
Trigger: TGTACATTTACACACCACACTGTAAAAGATGGGGAAAGCTAGCCAGGCTACATATTTAGAAGAGTGTTTATGGTGGAGATTAGCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR GCA 90 bp GCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTaGTATAAAGACACATGCACACTTATGTTTATTGCGGCACTATTC +
Preference number: 1 (lower is better)
Translates to: AIPLLGIYPKDYKSC*YKDTCTLMFIAALF
Trigger: GAATAGTGCCGCAATAAACATAAGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGGGTATATACCCAGTAATGGGATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp ACCTACTACTTGAACCTTATTTCCCAATATTTGCTACTTCTCACGTaGACACTTCACTCCAGTGGTTTTATTCCCTGTTATGTCAAAAAC +
Preference number: 1 (lower is better)
Translates to: TYYLNLISQYLLLLT*TLHSSGFIPCYVKN
Trigger: GTTTTTGACATAACAGGGAATAAAACCACTGGAGTGAAGTGTCCACGTGAGAAGTAGCAAATATTGGGAAATAAGGTTCAAGTAGTAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR TCA 90 bp CACAGGGATGGGTCTGTGACAGCATTTTCTTACAGCTTTTCCTCTTaGCATGTAAACATTCAGTTACACAAGGATTTAAATGTAATAAGC +
Preference number: 1 (lower is better)
Translates to: HRDGSVTAFSYSFSS*HVNIQLHKDLNVIS
Trigger: GCTTATTACATTTAAATCCTTGTGTAACTGAATGTTTACATGTCAAGAGGAAAAGCTGTAAGAAAATGCTGTCACAGACCCATCCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp TATTCTGAAGAAGACAAGGATAAAAGGAAAAGGTTGAATGGAATATaGACTGACCCAGAAGTGGGAATCTCATGGATGGCATATGCATTA +
Preference number: 1 (lower is better)
Translates to: YSEEDKDKRKRLNGI*TDPEVGISWMAYAL
Trigger: TAATGCATATGCCATCCATGAGATTCCCACTTCTGGGTCAGTTCATATTCCATTCAACCTTTTCCTTTTATCCTTGTCTTCTTCAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTTTTaGAGACAATACAATTGTATGATCCCTAAATATGGGAGAACATAT +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVYVCVCVF*RQYNCMIPKYGRTY
Trigger: ATATGTTCTCCCATATTTAGGGATCATACAATTGTATTGTCTTCAAAACACACACACACACACATACACACACACACACACACACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TATAAAGCAAGAGAAGAATATCCTCTTCAATACATGGGAAAAGAATaGCTACTCTTTACAGTCACAGGCAAAACGGAAATGATAGGATGG +
Preference number: 1 (lower is better)
Translates to: YKAREEYPLQYMGKE*LLFTVTGKTEMIGW
Trigger: CCATCCTATCATTTCCGTTTTGCCTGTGACTGTAAAGAGTAGCCATTCTTTTCCCATGTATTGAAGAGGATATTCTTCTCTTGCTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp TTCCTGATGTCACATTCCTTCCTATTGAGTAAGTACAGATTTAAGTaGTTGGATCTTATTACAGTTGGCCAGAATCAAAGTTACTTAGGG +
Preference number: 1 (lower is better)
Translates to: FLMSHSFLLSKYRFK*LDLITVGQNQSYLG
Trigger: CCCTAAGTAACTTTGATTCTGGCCAACTGTAATAAGATCCAACCACTTAAATCTGTACTTACTCAATAGGAAGGAATGTGACATCAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 90 bp AAAAATCACAAAATGACAGCATCCTGGGAAGCAAAGTCTATCAAATaGCAAAGGCCAAATCTCAGAAATGCCAACAGTTCCATAACATTT +
Preference number: 1 (lower is better)
Translates to: KNHKMTASWEAKSIK*QRPNLRNANSSITF
Trigger: AAATGTTATGGAACTGTTGGCATTTCTGAGATTTGGCCTTTGCCATTTGATAGACTTTGCTTCCCAGGATGCTGTCATTTTGTGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 90 bp CCATTTTTCCAAATTCTCAAATGGTTATTCATCCCCATTTGGCAATaGTTACTTACCAGTGACATACGTTCTATTGTTGCTAGGAACTTA +
Preference number: 1 (lower is better)
Translates to: PFFQILKWLFIPIWQ*LLTSDIRSIVARNL
Trigger: TAAGTTCCTAGCAACAATAGAACGTATGTCACTGGTAAGTAATCATTGCCAAATGGGGATGAATAACCATTTGAGAATTTGGAAAAATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCACAACCACAGCTCACTaGGCCACAGCTCACTGCAGC +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPTTTAH*ATAHCS
Trigger: GCTGCAGTGAGCTGTGGCTCAGTGAGCTGTGGTTGT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCTTGTCCAGGCTGGAGTaGAGTGGCACAACCACAGCT +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPLSRLE*SGTTTA
Trigger: AGCTGTGGTTGTGCCACTGCACTCCAGCCTGGACAA...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGATCTCCTGACCTCGTaGTCGGCCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVDLLTS*SARLGL
Trigger: GAGGCCAAGGCGGGCCGATCACGAGGTCAGGAGATC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGATCTCCTGACCTCGTaGTCGGCCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRADLLTS*SARLGL
Trigger: GAGGCCAAGGCGGGCCGATCACGAGGTCAGGAGATC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATGGTCTCGATCTCCTaGCCTCGTGATCGGCCCGCC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVMVSIS*PRDRPA
Trigger: GGCGGGCCGATCACGAGGTCAGGAGATCGAGACCAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATTAGCTGGGCGCGGTaGCGGGCGTCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVISWAR*RASVVP
Trigger: TGGGACTACAGACGCCCGCCACCGCGCCCAGCTAAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCTGAGACAGGAGAATaGCGTGAACCTGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVAETGE*REPGRR
Trigger: CCGCCTCCCAGGTTCACGCCATTCTCCTGTCTCAGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCCCAGCCTCAGCCTTCTaGGTAGCTGGGACTGCAGGC +
Preference number: 2 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFPASAF*VAGTAG
Trigger: GCCTGCAGTCCCAGCTACTCAGAAGGCTGAGGCTGG...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCCTCCCAGGCTCAGGTaGTTCTCCAGCCTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: STTENVKGTGLKGSDSSAPPRLR*FSSLSL
Trigger: AAGGCTGAGGCTGGAGAATCACCTGAGCCTGGGAGG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTCGGCCTCCCAAAGTaGTGGATTACAGGCACGAGC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLGLPK*WITGTS
Trigger: GCTCGTGCCTGTAATCCAGCACTTTGGGAGGCCGAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCTGAGGCAGGAGAATaGCGTGAACCCGAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAAEAGE*REPEKR
Trigger: CCGCTTCTCGGGTTCACGCCATTCTCCTGCCTCAGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp TTTCCCTGGATGACTGGGGGCTTGGTAGTCTGTAAGAAGTCGATATaGTCCTCTAAGGTGTTCTCAGCTGTGAGCGTGGCTACTTGGAGA +
Preference number: 2 (lower is better)
Translates to: FPWMTGGLVVCKKSI*SSKVFSAVSVATWR
Trigger: TCTCCAAGTAGCCACGCTCACAGCTGAGAACACCTTAGAGGACAATATCGACTTCTTACAGACTACCAAGCCCCCAGTCATCCAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp TCTAAAGACCGCAGTACACATGTGGATTTGCCACCTGGCAGTCAATaGGTCTCTGAATTTCCCTGGATGACTGGGGGCTTGGTAGTCTGT +
Preference number: 2 (lower is better)
Translates to: SKDRSTHVDLPPGSQ*VSEFPWMTGGLVVC
Trigger: ACAGACTACCAAGCCCCCAGTCATCCAGGGAAATTCAGAGACCAATTGACTGCCAGGTGGCAAATCCACATGTGTACTGCGGTCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCAAAAACTCCCCTCATaGGAAATGACTTCACTTCTC +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPQKLPS*EMTSLL
Trigger: GAGAAGTGAAGTCATTTCTCATGAGGGGAGTTTTTG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATGGTCTCGATCTCCTaGCCTCGTGATCGGCCCGCC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSMVSIS*PRDRPA
Trigger: GGCGGGCCGATCACGAGGTCAGGAGATCGAGACCAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCTTGTCCTTAAAGCAGTaGCACTCAAAAAGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPLSLKQ*HSKSGP
Trigger: TGGACCACTTTTTGAGTGGCACTGCTTTAAGGACAA...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGTCTCCCACGAGAGTaGACCAAACGAGCGATCCCA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVCLPRE*TKRAIP
Trigger: TGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGACA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGTGAGAGGAGATCGTaGCATTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSERRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCACGATCTCCTCTCACT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCACTCAACAAAAATACTaGTCTCCAACAGATTGGGAG +
Preference number: 2 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGTQQKY*SPTDWE
Trigger: CTCCCAATCTGTTGGAGACCAGTATTTTTGTTGAGT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGTTTTTGGACTGGTGTaGTCAGTTGACCTGTCATTA +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPVFGLV*SVDLSL
Trigger: TAATGACAGGTCAACTGACCACACCAGTCCAAAAAC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CAA 90 bp GTCTCCCACGAGAGTGCACCAAACGAGCGATCCCAAGAAATGGACTaGAGGCACATTTTGCAGAGGTGTCTTTTTCAGTTTGCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: VSHESAPNERSQEMD*RHILQRCLFQFAGF
Trigger: GAAACCAGCAAACTGAAAAAGACACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGAATCTTTAGACCAGTaGGAAATGGGAACATACACA +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPESLDQ*EMGTYT
Trigger: TGTGTATGTTCCCATTTCTCACTGGTCTAAAGATTC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCAGCTACTCGGGAGGCTaGGGCAGGAGAATTGCTCAA +
Preference number: 2 (lower is better)
Translates to: STTENVKGTGLKGSDSSASYSGG*GRRIAQ
Trigger: TTGAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGCTTATCACCCTGGATaGGATAAATACAGGAACAAA +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPAYHPG*DKYRNK
Trigger: TTTGTTCCTGTATTTATCTCATCCAGGGTGATAAGC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGTGAGACTCCATGTTaGGTCAGTATGGTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSETPC*VSMVWG
Trigger: CCCCCAGACCATACTGACTCAACATGGAGTCTCACT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGACAGGAGAATGGCGTaGACCTGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSDRRMA*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGGTGTTCTCAGCTGTaGGCGTGGCTACTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRARCSQL*AWLLGD
Trigger: GTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCCATCTATGGCAGTCTTaGAAATGCAAATCCTACAAT +
Preference number: 2 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGHLWQS*KCKSYN
Trigger: ATTGTAGGATTTGCATTTGCAAGACTGCCATAGATG...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGTCTCCCACGAGAGTaGACCAAACGAGCGATCCCA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRACLPRE*TKRAIP
Trigger: TGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGACA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTGGGAGGCGGAGCTTaGAGTGAGAGGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLGGGA*SERRSC
Trigger: GCACGATCTCCTCTCACTGCAAGCTCCGCCTCCCAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp AGTGCACCAAACGAGCGATCCCAAGAAATGGACTTGAGGCACATTTaGCAGAGGTGTCTTTTTCAGTTTGCTGGTTTCCCACAGATGGCT +
Preference number: 2 (lower is better)
Translates to: SAPNERSQEMDLRHI*QRCLFQFAGFPQMA
Trigger: AGCCATCTGTGGGAAACCAGCAAACTGAAAAAGACACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp CCTGGCAGTCAATTGGTCTCTGAATTTCCCTGGATGACTGGGGGCTaGGTAGTCTGTAAGAAGTCGATATTGTCCTCTAAGGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: PGSQLVSEFPWMTGG*VVCKKSILSSKVFS
Trigger: TGAGAACACCTTAGAGGACAATATCGACTTCTTACAGACTACCAAGCCCCCAGTCATCCAGGGAAATTCAGAGACCAATTGACTGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCTGTCTTACCTCTTTCTaGACAATTTTAACCTCACTG +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPCLTSF*TILTSL
Trigger: CAGTGAGGTTAAAATTGTTCAGAAAGAGGTAAGACA...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGGCGGAGCTTGCAGTaGGAGGAGATCGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRRSLQ*EEIVPL
Trigger: CAATGGCACGATCTCCTCTCACTGCAAGCTCCGCCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACTGAGGCAGGAGAATTaGTCAAAATCCGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: THCYVFFPLILRQTYGLSLRQEN*SKSGGG
Trigger: TCCACCTCCGGATTTTGAGCAATTCTCCTGCCTCAG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCACAGTGCTAATATCTaGACTAAAATCCTTGACATC +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPHSANI*TKILDI
Trigger: GATGTCAAGGATTTTAGTGCAGATATTAGCACTGTG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGATCTCCCTAGCAGCTaGCATAATTTCCCCAACACC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVDLPSS*HNFPNT
Trigger: GGTGTTGGGGAAATTATGGCAGCTGCTAGGGAGATC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCAGCCTTCTGAGTAGCTaGGACTGCAGGCACATGCCA +
Preference number: 2 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFSLLSS*DCRHMP
Trigger: TGGCATGTGCCTGCAGTCCCAGCTACTCAGAAGGCT...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCCATCTTTTACAGTGTaGTGTGTAAATGTACAGATC +
Preference number: 2 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPPSFTV*CVNVQI
Trigger: GATCTGTACATTTACACACCACACTGTAAAAGATGG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACCGCAGTACACATGTaGATTTGCCACCTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRATAVHM*ICHLAV
Trigger: GACTGCCAGGTGGCAAATCCACATGTGTACTGCGGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATAGTCAGTGCTACTTaGGGTCATCAGCATGGTCTG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVIVSAT*GHQHGL
Trigger: CAGACCATGCTGATGACCTCAAGTAGCACTGACTAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACCCAAGAAATGGACTTaGGGCACATTTTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVPKKWT*GTFCRG
Trigger: ACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTACTGGGGAAGGCATaGAGCTACACAACAACTGTC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLLGKA*SYTTTV
Trigger: GACAGTTGTTGTGTAGCTTCATGCCTTCCCCAGTAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGATCTCTTGACCTCATaGTCCGCTCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDDLLTS*SARLGL
Trigger: GAGGCCGAGGCGAGCGGATCATGAGGTCAAGAGATC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGGTGTTCTCAGCTGTaGGCGTGGCTACTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRCSQL*AWLLGD
Trigger: GTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAACTGAGGACAGGTTATaGGTCCACAGAACCTCACAA +
Preference number: 2 (lower is better)
Translates to: THCYVFFPLILRQTYGLSTEDRL*VHRTSQ
Trigger: TTGTGAGGTTCTGTGGACGCATAACCTGTCCTCAGT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGATCTCCCTAGCAGCTaGCATAATTTCCCCAACACC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRADLPSS*HNFPNT
Trigger: GGTGTTGGGGAAATTATGGCAGCTGCTAGGGAGATC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAACCAAAGAGAACATATaGCCCAAAGGCTGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVTKENI*PKGWLC
Trigger: ACAGAGCCAGCCTTTGGGGCATATGTTCTCTTTGGT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTACACATGTGGATTTaGCACCTGGCAGTCAATTGG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVHMWI*HLAVNW
Trigger: CCAATTGACTGCCAGGTGGCAAATCCACATGTGTAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAAGCACCTGTGAGTTaGCAGACTCACCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKAPVS*QTHPGK
Trigger: TTTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTATGGCTTGGCAGTTaGCAAGCAAGTGTTTCACTG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVWLGS*QASVSL
Trigger: CAGTGAAACACTTGCTTGCCAACTGCCAAGCCATAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGGGTGTACTGTTCATaGGTTAGTTACTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGVYCS*VSYWGR
Trigger: CCTTCCCCAGTAACTAACCCATGAACAGTACACCCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTCTCTGAATTTCCCTaGATGACTGGGGGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVSEFP*MTGGLV
Trigger: TACCAAGCCCCCAGTCATCCAGGGAAATTCAGAGAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTGGAACGTACATCGTaGTTCATGGGAGAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVERTS*FMGERL
Trigger: AAGCCTCTCTCCCATGAACCACGATGTACGTTCCAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACGGTTTCTGCCTCTGTaGAACGTACATCGTGGTTCA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRARFLPL*NVHRGS
Trigger: TGAACCACGATGTACGTTCCACAGAGGCAGAAACCG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp GCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGAGACACAGTaGACATTGCCTCCCAAAACTAACATGCTGCCCCTAAGTGAATCT +
Preference number: 2 (lower is better)
Translates to: AWSGFNLEDRNSETQ*TLPPKTNMLPLSES
Trigger: AGATTCACTTAGGGGCAGCATGTTAGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAATTCCTGTCTTCCAAATTGAAGCCAGACCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAACTGGTGTGGTCAGTTaGCCTGTCATTACATATTCC +
Preference number: 2 (lower is better)
Translates to: THCYVFFPLILRQTYGLSTGVVS*PVITYS
Trigger: GGAATATGTAATGACAGGTCAACTGACCACACCAGT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAACAGGAATGCAGAAGTaGATGGGATGGAGCATAATC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVTGMQK*MGWSII
Trigger: GATTATGCTCCATCCCATTCACTTCTGCATTCCTGT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAATTTTCTTGGCCAGTaGGACTCCATGTTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVNFLGQ*DSMLSQ
Trigger: CTGACTCAACATGGAGTCTCACTGGCCAAGAAAATT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAATGGTGAGAGGCTTTaGGGTTACATCAGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVNGERL*GYISVS
Trigger: GGAAACACTGATGTAACCTCAAAGCCTCTCACCATT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTATATGTTGTTCTCTaGTTGTCTCCCACGAGAGTG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVYVVL*LSPTRV
Trigger: CACTCTCGTGGGAGACAATCAGAGAACAACATATAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCTGCCTGTAGTCTGTaGTCTAAGAAAAACTGGTGC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSACSL*SKKNWC
Trigger: GCACCAGTTTTTCTTAGATCACAGACTACAGGCAGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACATTCAGTGCCAAGTTaGCTGAATGCGATTGTGGCT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAHSVPS*LNAIVA
Trigger: AGCCACAATCGCATTCAGTCAACTTGGCACTGAATG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAAGGTACAGCTTCCTaGGGGACGCAGCTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKGTAS*GTQLKR
Trigger: TCTCTTGAGCTGCGTCCCTCAGGAAGCTGTACCTTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTGTCTTTTTCAGTTTaGTGGTTTCCCACAGATGGC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVSFSV*WFPTDG
Trigger: GCCATCTGTGGGAAACCAGCAAACTGAAAAAGACAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTCGGCCTCCCAAAGTaGTGGATTACAGGCACGAGC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLGLPK*WITGTS
Trigger: GCTCGTGCCTGTAATCCAGCACTTTGGGAGGCCGAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCCTGTTGCAGCAACATaGACGTGGTGTGCTCTCAGT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSPVAAT*TWCALS
Trigger: ACTGAGAGCACACCACGTGCATGTTGCTGCAACAGG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAAATGTGGAAGTCCTTaGGAACAAAGGCCCATCAAG +
Preference number: 2 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFKCGSP*EQRPIK
Trigger: CTTGATGGGCCTTTGTTCCCAAGGACTTCCACATTT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCTCTAGGCAACAGATaGACAATCGCTTGTTTGAAC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVALGNR*TIACLN
Trigger: GTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATATGCCCCAAAGGCTaGCTCTGTTTTAAAGTCGTG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVICPKG*LCFKVV
Trigger: CACGACTTTAAAACAGAGCCAGCCTTTGGGGCATAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACACCTGGCAGTCAATTaGTCTCTGAATTTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAHLAVN*SLNFPG
Trigger: TCCAGGGAAATTCAGAGACCAATTGACTGCCAGGTG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp AAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTaGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: KFCLGQEIPHRESAK*KVFSKNLDCKHSLA
Trigger: TGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
3UTR CAA 90 bp CTCCATTATGCTAGAAGGATGGCATGGTCCCATGTTAGTTTCAATTaGCTGCCTACAGAGGGAGGACCAAGGCACTTTAACTATTTTTGG +
Preference number: 2 (lower is better)
Translates to: LHYARRMAWSHVSFN*LPTEGGPRHFNYFW
Trigger: CCAAAAATAGTTAAAGTGCCTTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGCATAATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp CACCAAGAGCTTCCTTGGATAAAGGTTAAGTGGAGGTATCTTGCTTaGCCCAAACAGAGGCATATTCAAGTGAATATGGAGCCAACTGAC +
Preference number: 2 (lower is better)
Translates to: HQELPWIKVKWRYLA*PKQRHIQVNMEPTD
Trigger: GTCAGTTGGCTCCATATTCACTTGAATATGCCTCTGTTTGGGCAAAGCAAGATACCTCCACTTAACCTTTATCCAAGGAAGCTCTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATTCAGAGACACAGTTaGCATTGCCTCCCAAAACTA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVIQRHS*HCLPKL
Trigger: TAGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAAGCAGTATTCTGCTaGCGATGCCACAGGGATGGG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQAVFC*RCHRDG
Trigger: CCCATCCCTGTGGCATCGTCAGCAGAATACTGCTTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAATTTTCTTGGCCAGTaGGACTCCATGTTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRANFLGQ*DSMLSQ
Trigger: CTGACTCAACATGGAGTCTCACTGGCCAAGAAAATT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCAGCATCTAACAACCTaGTGCCTTATGCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSQHLTT*CLMLGH
Trigger: GTGTCCCAGCATAAGGCATCAGGTTGTTAGATGCTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAGAACCCACATCTTTaGGCTGCAGAGATGCCAGCA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKNPHL*AAEMPA
Trigger: TGCTGGCATCTCTGCAGCTCAAAGATGTGGGTTCTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCAGCCGACACAGATTTaGCAAGAGAAGCCCAAACCA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSQPTQI*QEKPKP
Trigger: TGGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAATGGTGAGAGGCTTTaGGGTTACATCAGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRANGERL*GYISVS
Trigger: GGAAACACTGATGTAACCTCAAAGCCTCTCACCATT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTATATGTTGTTCTCTaGTTGTCTCCCACGAGAGTG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVYVVL*LSPTRV
Trigger: CACTCTCGTGGGAGACAATCAGAGAACAACATATAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTGAATAACTTGGCCTaGAATATTCATGGTTGCACC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVNNLA*NIHGCT
Trigger: GGTGCAACCATGAATATTTCAGGCCAAGTTATTCAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCCTGGCTAACACTGTaGAACTCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSWLTL*NSISTK
Trigger: TTTAGTAGAGATGGAGTTTCACAGTGTTAGCCAGGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGGTTGAATGGAATATaGACTGACCCAGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRARLNGI*TDPEVG
Trigger: TCCCACTTCTGGGTCAGTTCATATTCCATTCAACCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTAATGTCACTGGAATaGCTCTTCCTGATGTCACAT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLMSLE*LFLMSH
Trigger: ATGTGACATCAGGAAGAGTCATTCCAGTGACATTAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGATCTCCCTAGCAGCTaGCATAATTTCCCCAACACC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSDLPSS*HNFPNT
Trigger: GGTGTTGGGGAAATTATGGCAGCTGCTAGGGAGATC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAACTGATGGCAGTTTCTaGTTACAGTGCTCTCTCATT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVTDGSF*LQCSLI
Trigger: AATGAGAGAGCACTGTAAGCAGAAACTGCCATCAGT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTATATCCCCAAATCTaGCACTTCCCAGCTATGTCA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLYPQI*HFPAMS
Trigger: TGACATAGCTGGGAAGTGGCAGATTTGGGGATATAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCGGCTCTATCGGAAATaGCTGTTGCAGCAACATGCA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRLYRK*LLQQHA
Trigger: TGCATGTTGCTGCAACAGGCATTTCCGATAGAGCCG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAATGTGGAAGTCCTTaGGAACAAAGGCCCATCAAG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKCGSP*EQRPIK
Trigger: CTTGATGGGCCTTTGTTCCCAAGGACTTCCACATTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTGAGGTCATCAGCATaGTCTGGCTTCAATTTGGAA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLRSSA*SGFNLE
Trigger: TTCCAAATTGAAGCCAGACCATGCTGATGACCTCAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCTACTATAGCCCCATaGAAAAAGCCCTCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSTIAP*KKPSLS
Trigger: AGAAAGAGAGGGCTTTTTCCATGGGGCTATAGTAGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCTCTAGGCAACAGATaGACAATCGCTTGTTTGAAC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAALGNR*TIACLN
Trigger: GTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGAATCCATGATATTTTaGCCAATGCAGAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVESMIF*PMQRVF
Trigger: GAAGACCCTCTGCATTGGCCAAAATATCATGGATTC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCATGGGTTAGTTACTaGGGAAGGCATGAAGCTACA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRASWVSY*GRHEAT
Trigger: TGTAGCTTCATGCCTTCCCCAGTAACTAACCCATGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGGGGTGTACTGTTCATaGGTTAGTTACTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSGVYCS*VSYWGR
Trigger: CCTTCCCCAGTAACTAACCCATGAACAGTACACCCC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTTTGTTCTTATCAGTaGCCTTTTCCCACCAACTTC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVCSYQ*PFPTNF
Trigger: GAAGTTGGTGGGAAAAGGCCACTGATAAGAACAAAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGTGGAACGTACATCGTaGTTCATGGGAGAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSVERTS*FMGERL
Trigger: AAGCCTCTCTCCCATGAACCACGATGTACGTTCCAC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCGGTTTCTGCCTCTGTaGAACGTACATCGTGGTTCA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRFLPL*NVHRGS
Trigger: TGAACCACGATGTACGTTCCACAGAGGCAGAAACCG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCCGGAGTCGGCAAATaGCTATATTCAGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDAGVGK*LYSELG
Trigger: CCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp CTCTCATTAGTCCCAAGGAATAAGCAGGTGGATGATGATACTGGCTaGATGGATGATAACACTCCAGGGAGGGAAATGCATAAAACACTT +
Preference number: 2 (lower is better)
Translates to: LSLVPRNKQVDDDTG*MDDNTPGREMHKTL
Trigger: AAGTGTTTTATGCATTTCCCTCCCTGGAGTGTTATCATCCATCAAGCCAGTATCATCATCCACCTGCTTATTCCTTGGGACTAATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp AGAACACTTTTACACTGTTGGTGGGACTGTGAACTAGTTCAACCATaGTGGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAA +
Preference number: 2 (lower is better)
Translates to: RTLLHCWWDCELVQP*WKSVWRFLRDLELE
Trigger: TTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp CAAAGTTTCCTTATCTCAGCACCTACTCTTTCTGATGGTATGTTTTaGAAGGCTGCACAGTACGACTCTGGGTACCGTGTGTACATACAT +
Preference number: 2 (lower is better)
Translates to: QSFLISAPTLSDGMF*KAAQYDSGYRVYIH
Trigger: ATGTATGTACACACGGTACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATACCATCAGAAAGAGTAGGTGCTGAGATAAGGAAACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGCCAAGAGGAATGGTaGGAGGCTTTGAGGTTACAT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSQEEW*EALRLH
Trigger: ATGTAACCTCAAAGCCTCTCACCATTCCTCTTGGCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAACTGAGAACAAGTTTTaGACTTGTCTGGACCACTAT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVTENKF*TCLDHY
Trigger: ATAGTGGTCCAGACAAGTTCAAAACTTGTTCTCAGT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCCTGGCTAACACTGTaGAACTCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRASWLTL*NSISTK
Trigger: TTTAGTAGAGATGGAGTTTCACAGTGTTAGCCAGGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCATTCAGTGCCAAGTTaGCTGAATGCGATTGTGGCT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHSVPS*LNAIVA
Trigger: AGCCACAATCGCATTCAGTCAACTTGGCACTGAATG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGGAATGACTCTTCCTaGTGTCACATTCCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAWNDSS*CHIPSY
Trigger: ATAGGAAGGAATGTGACATCAGGAAGAGTCATTCCA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTAATGTCACTGGAATaGCTCTTCCTGATGTCACAT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRALMSLE*LFLMSH
Trigger: ATGTGACATCAGGAAGAGTCATTCCAGTGACATTAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGTCATCCAGAGCAATaGGGAAAGCATTTGTACATT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSHPEQ*GKHLYI
Trigger: AATGTACAAATGCTTTCCTCATTGCTCTGGATGACT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCCTGCCCAGGAGACTaGTGGCAGTTTCTGCTTACA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSCPGD*WQFLLT
Trigger: TGTAAGCAGAAACTGCCATCAGTCTCCTGGGCAGGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCAGTCAATTGGTCTCTaGATTTCCCTGGATGACTGG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSQSIGL*ISLDDW
Trigger: CCAGTCATCCAGGGAAATTCAGAGACCAATTGACTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTCACGGTAGCCGCTTaGGAGGGGATATTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDFTVAA*EGILEV
Trigger: CACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAAATAGAGATGTCCTaGTTGTTCTTTTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKIEMS*LFFCGG
Trigger: CCCTCCACAAAAGAACAAGCAGGACATCTCTATTTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACCAAAGAGAACATATaGCCCAAAGGCTGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTKENI*PKGWLC
Trigger: ACAGAGCCAGCCTTTGGGGCATATGTTCTCTTTGGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTATATCCCCAAATCTaGCACTTCCCAGCTATGTCA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRALYPQI*HFPAMS
Trigger: TGACATAGCTGGGAAGTGGCAGATTTGGGGATATAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGACAGCACTGGACTTaGAAGACCTGGTTATATCCC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRQHWT*KTWLYP
Trigger: GGGATATAACCAGGTCTTGCAAGTCCAGTGCTGTCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTCAGGGAATGTGTTTaGAGCCCGTTTCACGGTAGC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLRECV*SPFHGS
Trigger: GCTACCGTGAAACGGGCTGCAAACACATTCCCTGAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAAAATGTGAAAGGCACTaGTTTAAAGGGCTCAGATTC +
Preference number: 2 (lower is better)
Translates to: THCYVFFPLILRQTYGLSKCERH*FKGLRF
Trigger: GAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATCTGTGCAAAAATGTaGAAGTCCTTGGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVICAKM*KSLGTK
Trigger: CTTTGTTCCCAAGGACTTCCACATTTTTGCACAGAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAAGCACCTGTGAGTTaGCAGACTCACCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKAPVS*QTHPGK
Trigger: TTTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTGAGTCACCACACCTaGCCTTATTTTCGAGTTTTA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVSHHT*PYFRVL
Trigger: TAAAACTCGAAAATAAGGCCAGGTGTGGTGACTCAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGGACTAAGAAGATATaGGATGGTGATTCATCAGGA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRTKKI*DGDSSG
Trigger: TCCTGATGAATCACCATCCCATATCTTCTTAGTCCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGAATCCATGATATTTTaGCCAATGCAGAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAESMIF*PMQRVF
Trigger: GAAGACCCTCTGCATTGGCCAAAATATCATGGATTC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACTTGGAGACAGCACTaGACTTGCAAGACCTGGTTA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTWRQH*TCKTWL
Trigger: TAACCAGGTCTTGCAAGTCCAGTGCTGTCTCCAAGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCACCTGGCAGTCAATTaGTCTCTGAATTTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHLAVN*SLNFPG
Trigger: TCCAGGGAAATTCAGAGACCAATTGACTGCCAGGTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTTTGTTCTTATCAGTaGCCTTTTCCCACCAACTTC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVCSYQ*PFPTNF
Trigger: GAAGTTGGTGGGAAAAGGCCACTGATAAGAACAAAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp CCTAGATTGGTCCTAACCTACTACTTGAACCTTATTTCCCAATATTaGCTACTTCTCACGTGGACACTTCACTCCAGTGGTTTTATTCCC +
Preference number: 2 (lower is better)
Translates to: PRLVLTYYLNLISQY*LLLTWTLHSSGFIP
Trigger: GGGAATAAAACCACTGGAGTGAAGTGTCCACGTGAGAAGTAGCAAATATTGGGAAATAAGGTTCAAGTAGTAGGTTAGGACCAATCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CAA 90 bp AAGCCGATTACATTATCAGCCCTATTGTCAAATAGTCAGTGCTACTaGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAAT +
Preference number: 2 (lower is better)
Translates to: KPITLSALLSNSQCY*RSSAWSGFNLEDRN
Trigger: ATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAATAGGGCTGATAATGTAATCGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp TCTAATAATGGACTCAGACTCAATAGGAAAATAGAGATGTCCTGCTaGTTCTTTTGTGGAGGGTCAAAGGACATGTACCCTTGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: SNNGLRLNRKIEMSC*FFCGGSKDMYPCCK
Trigger: CTTGCAGCAAGGGTACATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGACATCTCTATTTTCCTATTGAGTCTGAGTCCATTATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAAAAATTTGCAACAATTaGCCTAAGCCTTCTCATGTC +
Preference number: 2 (lower is better)
Translates to: THCYVFFPLILRQTYGLSKICNN*PKPSHV
Trigger: GACATGAGAAGGCTTAGGTCAATTGTTGCAAATTTT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTCAGTGATTGTCTTTaGAAGTGTGGTGTAAATGTC +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVFSDCL*KCGVNV
Trigger: GACATTTACACCACACTTTCAAAGACAATCACTGAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTGTCTCTCCTTAAGTaGAACATGTTCGAACTTAAT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVSLLK*NMFELN
Trigger: ATTAAGTTCGAACATGTTTCACTTAAGGAGAGACAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATAGTCAGTGCTACTTaGGGTCATCAGCATGGTCTG +
Preference number: 2 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIVSAT*GHQHGL
Trigger: CAGACCATGCTGATGACCTCAAGTAGCACTGACTAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAGCATCTAACAACCTaGTGCCTTATGCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQHLTT*CLMLGH
Trigger: GTGTCCCAGCATAAGGCATCAGGTTGTTAGATGCTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAGCCGACACAGATTTaGCAAGAGAAGCCCAAACCA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQPTQI*QEKPKP
Trigger: TGGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAATGGTGAGAGGCTTTaGGGTTACATCAGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSNGERL*GYISVS
Trigger: GGAAACACTGATGTAACCTCAAAGCCTCTCACCATT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGTATATGTTGTTCTCTaGTTGTCTCCCACGAGAGTG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSVYVVL*LSPTRV
Trigger: CACTCTCGTGGGAGACAATCAGAGAACAACATATAC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCATTTAAAGACCTATaGGATACTTCCAAGACAAGG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSFKDL*DTSKTR
Trigger: CCTTGTCTTGGAAGTATCTCATAGGTCTTTAAATGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCTGCCTGTAGTCTGTaGTCTAAGAAAAACTGGTGC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSACSL*SKKNWC
Trigger: GCACCAGTTTTTCTTAGATCACAGACTACAGGCAGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCCTTTCAACCTAGCCTaGCTCATGGTGAACTGCCAA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDPFNLA*LMVNCQ
Trigger: TTGGCAGTTCACCATGAGTCAGGCTAGGTTGAAAGG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGAATGGAATATGAACTaGCCCAGAAGTGGGAATCTC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSEWNMN*PRSGNL
Trigger: GAGATTCCCACTTCTGGGTCAGTTCATATTCCATTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATATGGACTCCTAAATaGTTAGAGAAAGAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVIWTPK*LEKEAA
Trigger: AGCAGCTTCTTTCTCTAATCATTTAGGAGTCCATAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAGTTACTTAGGGGCTaGTTCTCTAACAGTGATTAT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKLLRG*FSNSDY
Trigger: ATAATCACTGTTAGAGAATCAGCCCCTAAGTAACTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACTTCCTCACAGTGCTaGTCAGACAGAATACCTAGA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTSSQC*SDRIPR
Trigger: TCTAGGTATTCTGTCTGATCAGCACTGTGAGGAAGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAGATTCCACCCATGTaGGTCTCTACTCAGGCATAC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQIPPM*VSTQAY
Trigger: GTATGCCTGAGTAGAGACTCACATGGGTGGAATCTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAATCTGCCAGCTGGTTaGGTCAGACGACACATTGAG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDNLPAG*VRRHIE
Trigger: CTCAATGTGTCGTCTGACTCAACCAGCTGGCAGATT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAGAGAATGGTGGCTaGCTGCAATGGCATGGAGTC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKENGG*LQWHGV
Trigger: GACTCCATGCCATTGCAGTCAGCCACCATTCTCTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCATTAGCTAAGCTAAACTaGCACCCCAACACAAATAAA +
Preference number: 2 (lower is better)
Translates to: THCYVFFPLILRQTYGLSLAKLN*HPNTNK
Trigger: TTTATTTGTGTTGGGGTGGCAGTTTAGCTTAGCTAA...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTGTATGCTCTGATTTaGAATTGTCAGGCAAAATGG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLYALI*NCQAKW
Trigger: CCATTTTGCCTGACAATTGCAAATCAGAGCATACAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATATAAAGGAATTAGCTaGAGTGTTTCACCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAYKGIS*SVSPLS
Trigger: AGAGAGGGGTGAAACACTGCAGCTAATTCCTTTATA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTCAGGCTTCCTCTATaGCTTTTTCTTCCCATTCAG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLRLPL*LFLPIQ
Trigger: CTGAATGGGAAGAAAAAGGCATAGAGGAAGCCTGAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTCCTGTCCATACTGTaGATGCTGGGTTATATTTTG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAFLSIL*MLGYIL
Trigger: CAAAATATAACCCAGCATGCACAGTATGGACAGGAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAGTTCATGGAGGGCTaGTTCCTGTCCATACTGTGC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKFMEG*FLSILC
Trigger: GCACAGTATGGACAGGAAGCAGCCCTCCATGAACTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACAATGTGCTTCCTTCTaGCCATTGTTTGTTCTTATC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAQCASF*PLFVLI
Trigger: GATAAGAACAAACAATGGGCAGAAGGAAGCACATTG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGGACCCTCTCCTATTaGCACCTCTGGGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDWTLSY*HLWVRM
Trigger: CATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCAACTCTCATGCATCTaGACTCAAATACTTTACCAG +
Preference number: 2 (lower is better)
Translates to: STTENVKGTGLKGSDSSAQLSCI*TQILYQ
Trigger: CTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAATGTGGAAGTCCTTaGGAACAAAGGCCCATCAAG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKCGSP*EQRPIK
Trigger: CTTGATGGGCCTTTGTTCCCAAGGACTTCCACATTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATCTGTGCAAAAATGTaGAAGTCCTTGGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAICAKM*KSLGTK
Trigger: CTTTGTTCCCAAGGACTTCCACATTTTTGCACAGAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTACATGGGAAAAGAATaGCTACTCTTTACAGTCACA +
Preference number: 2 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFYMGKE*LLFTVT
Trigger: TGTGACTGTAAAGAGTAGCCATTCTTTTCCCATGTA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGTATGGCTTGGCAGTTaGCAAGCAAGTGTTTCACTG +
Preference number: 2 (lower is better)
Translates to: TCTIALGNRWTIACLNYKVWLGS*QASVSL
Trigger: CAGTGAAACACTTGCTTGCCAACTGCCAAGCCATAC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTAATAAGTATGGCTTaGCAGTTGGCAAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRALISMA*QLASKC
Trigger: ACACTTGCTTGCCAACTGCCAAGCCATACTTATTAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGTCATCAGCATGGTCTaGCTTCAATTTGGAAGACAG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSVISMV*LQFGRQ
Trigger: CTGTCTTCCAAATTGAAGCCAGACCATGCTGATGAC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATATCCCTCAATAAATTaGACTCTCTGCTTTGTCCTA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVYPSIN*TLCFVL
Trigger: TAGGACAAAGCAGAGAGTCCAATTTATTGAGGGATA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCATGCCACCATGTCTaGCTAATTTGGTTTTTATTT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVACHHV*LIWFLF
Trigger: AAATAAAAACCAAATTAGCCAGACATGGTGGCATGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATATGCCCCAAAGGCTaGCTCTGTTTTAAAGTCGTG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSICPKG*LCFKVV
Trigger: CACGACTTTAAAACAGAGCCAGCCTTTGGGGCATAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACAAATTCTAATGTCTaGCCCTCAGAACATCCTTCA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRATNSNV*PSEHPS
Trigger: TGAAGGATGTTCTGAGGGCCAGACATTAGAATTTGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLWKSV*RFLRDL
Trigger: TAGATCCCTGAGGAATCTCCACACTGACTTCCACAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp ATAACGTTCTTAGCCTTTAGCCGGACATTGACAGCCTTCCCTAGATaGGTCCTAACCTACTACTTGAACCTTATTTCCCAATATTTGCTA +
Preference number: 2 (lower is better)
Translates to: ITFLAFSRTLTAFPR*VLTYYLNLISQYLL
Trigger: TAGCAAATATTGGGAAATAAGGTTCAAGTAGTAGGTTAGGACCAATCTAGGGAAGGCTGTCAATGTCCGGCTAAAGGCTAAGAACGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAGGTTAATAGCAGATaGAGAACAGAGACTATCGCG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKVNSR*RTETIA
Trigger: CGCGATAGTCTCTGTTCTTCATCTGCTATTAACCTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGTCACTATAGATTCTaGATTCTGATGGTTGCAAAT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGHYRF*ILMVAN
Trigger: ATTTGCAACCATCAGAATTCAGAATCTATAGTGACC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTGTCTCTCCTTAAGTaGAACATGTTCGAACTTAAT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVSLLK*NMFELN
Trigger: ATTAAGTTCGAACATGTTTCACTTAAGGAGAGACAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATTCAGAGACACAGTTaGCATTGCCTCCCAAAACTA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSIQRHS*HCLPKL
Trigger: TAGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATAGTCAGTGCTACTTaGGGTCATCAGCATGGTCTG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDIVSAT*GHQHGL
Trigger: CAGACCATGCTGATGACCTCAAGTAGCACTGACTAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTATGCTGGGACACATaGCTTATTTTTGAGTCGATT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRALCWDT*LIFESI
Trigger: AATCGACTCAAAAATAAGTCATGTGTCCCAGCATAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCCCAAGAAATGGACTTaGGGCACATTTTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDPKKWT*GTFCRG
Trigger: ACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCACAAGATGACATGGTaGTGCTTCTCTTTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHKMTW*CFSFLV
Trigger: TACCAAGAAAGAGAAGCATCACCATGTCATCTTGTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGAAGATATGGGATGGTaGTTCATCAGGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAEDMGW*FIRKIT
Trigger: TGTTATTTTCCTGATGAATCACCATCCCATATCTTC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAGTTACTTAGGGGCTaGTTCTCTAACAGTGATTAT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKLLRG*FSNSDY
Trigger: ATAATCACTGTTAGAGAATCAGCCCCTAAGTAACTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGGAATGACTCTTCCTaGTGTCACATTCCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSWNDSS*CHIPSY
Trigger: ATAGGAAGGAATGTGACATCAGGAAGAGTCATTCCA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTACTGGGGAAGGCATaGAGCTACACAACAACTGTC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLLGKA*SYTTTV
Trigger: GACAGTTGTTGTGTAGCTTCATGCCTTCCCCAGTAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAGTCAATTGGTCTCTaGATTTCCCTGGATGACTGG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQSIGL*ISLDDW
Trigger: CCAGTCATCCAGGGAAATTCAGAGACCAATTGACTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACCTCTACATGCCAATaGATTCTAAATGATATGGTC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRATSTCQ*ILNDMV
Trigger: GACCATATCATTTAGAATTCATTGGCATGTAGAGGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATGATGATACTGGCTTaGTGGATGATAACACTCCAG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSMMILA*WMITLQ
Trigger: CTGGAGTGTTATCATCCATCAAGCCAGTATCATCAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCACTTTTCTAGTCTGTaGACGTGCATCTCAACCAAA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHFSSL*TCISTK
Trigger: TTTGGTTGAGATGCACGTTCACAGACTAGAAAAGTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATGGAGCATAATCTGTaGAAAAATGTGGAAGTCCTT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAMEHNL*KNVEVL
Trigger: AAGGACTTCCACATTTTTGCACAGATTATGCTCCAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTGTATGCTCTGATTTaGAATTGTCAGGCAAAATGG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRALYALI*NCQAKW
Trigger: CCATTTTGCCTGACAATTGCAAATCAGAGCATACAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATATTTTGATATGTTCTaGAGAGCCCATGATATAGTG +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVYFDMF*RAHDIV
Trigger: CACTATATCATGGGCTCTGCAGAACATATCAAAATA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGTATGTTACATAAATaGCCACCAGAGTTAAATGAA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGMLHK*PPELNE
Trigger: TTCATTTAACTCTGGTGGGCATTTATGTAACATACC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACATGTTTCCCTGTTGTaGCTTAAATACTCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAHVSLL*LKYSFL
Trigger: GAGAAAAGAGTATTTAAGGCACAACAGGGAAACATG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGACATGTACCCTTGCTaGAAGAATAGAAGATGTAGC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSDMYPC*KNRRCS
Trigger: GCTACATCTTCTATTCTTGCAGCAAGGGTACATGTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGACAGCACTGGACTTaGAAGACCTGGTTATATCCC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRQHWT*KTWLYP
Trigger: GGGATATAACCAGGTCTTGCAAGTCCAGTGCTGTCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGTATACATGTGCCATaGTGGTGTGCTGCACCCATT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDCIHVP*WCAAPI
Trigger: AATGGGTGCAGCACACCAGCATGGCACATGTATACA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGAGCTGGGGAAGTCTTaGCAACTTAACTGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDELGKS*QLNCSC
Trigger: ACAGCTACAGTTAAGTTGGCAAGACTTCCCCAGCTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCATCACTCTAGGCTATaGTGCTGCTCCATCAACAGT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHHSRL*CCSINS
Trigger: ACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGATG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTGAGGTCATCAGCATaGTCTGGCTTCAATTTGGAA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLRSSA*SGFNLE
Trigger: TTCCAAATTGAAGCCAGACCATGCTGATGACCTCAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATATCCCTCAATAAATTaGACTCTCTGCTTTGTCCTA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAYPSIN*TLCFVL
Trigger: TAGGACAAAGCAGAGAGTCCAATTTATTGAGGGATA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCTACTATAGCCCCATaGAAAAAGCCCTCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSTIAP*KKPSLS
Trigger: AGAAAGAGAGGGCTTTTTCCATGGGGCTATAGTAGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGCGCAACTACATACTaGCCAGGACTAAGAAGATAT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSATTY*PGLRRY
Trigger: ATATCTTCTTAGTCCTGGCCAGTATGTAGTTGCGCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTAAGACTTGTTTTGTaGAGCTACAGAGCTAGAATA +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLRLVL*SYRARI
Trigger: TATTCTAGCTCTGTAGCTCCACAAAACAAGTCTTAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGGGGAAATTCTCTTTaGGTGATTCCAATTTCGTTT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAWGNSL*VIPISF
Trigger: AAACGAAATTGGAATCACCCAAAGAGAATTTCCCCA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGATCTTATTACAGTTaGCCAGAATCAAAGTTACTT +
Preference number: 2 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGSYYS*PESKLL
Trigger: AAGTAACTTTGATTCTGGCCAACTGTAATAAGATCC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCCATACTGTGCATGCTaGGTTATATTTTGGCAGATC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSPYCAC*VIFWQI
Trigger: GATCTGCCAAAATATAACCCAGCATGCACAGTATGG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTGCTTGTTCTTTTGTaGAGGGTCAAAGGACATGTA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLLVLL*RVKGHV
Trigger: TACATGTCCTTTGACCCTCCACAAAAGAACAAGCAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCACCTGGCAGTCAATTaGTCTCTGAATTTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHLAVN*SLNFPG
Trigger: TCCAGGGAAATTCAGAGACCAATTGACTGCCAGGTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGAGGTTTTTGGTGAATaGAATGTAAAGGAACTCTCT +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAEVFGE*NVKELS
Trigger: AGAGAGTTCCTTTACATTCCATTCACCAAAAACCTC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCAGCAACATGCACGTaGTGTGCTCTCAGTAAATGT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDAATCT*CALSKC
Trigger: ACATTTACTGAGAGCACACCACGTGCATGTTGCTGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATACATGTGCCATGCTaGTGTGCTGCACCCATTAAC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDIHVPC*CAAPIN
Trigger: GTTAATGGGTGCAGCACACCAGCATGGCACATGTAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTCGTCCTATTTACATaGACCCTCTCCTATTGCCAC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLVLFT*TLSYCH
Trigger: GTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp GGGTTTTCATATCCTAATACCTCCTACTTCATCTACTGTGTGTTTTaGGACTGGTGTGGTCAGTTGACCTGTCATTACATATTCCCATAT +
Preference number: 2 (lower is better)
Translates to: GFSYPNTSYFIYCVF*DWCGQLTCHYIFPY
Trigger: ATATGGGAATATGTAATGACAGGTCAACTGACCACACCAGTCCAAAAACACACAGTAGATGAAGTAGGAGGTATTAGGATATGAAAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACAGGAATGCAGAAGTaGATGGGATGGAGCATAATC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTGMQK*MGWSII
Trigger: GATTATGCTCCATCCCATTCACTTCTGCATTCCTGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATACAGGAATGCAGAAGTaGATGGGATGGAGCATAATC +
Preference number: 2 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYTGMQK*MGWSII
Trigger: GATTATGCTCCATCCCATTCACTTCTGCATTCCTGT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATTCAGAGACACAGTTaGCATTGCCTCCCAAAACTA +
Preference number: 2 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIQRHS*HCLPKL
Trigger: TAGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGGTTGAATGGAATATaGACTGACCCAGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRLNGI*TDPEVG
Trigger: TCCCACTTCTGGGTCAGTTCATATTCCATTCAACCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGTCACTTAATGGCTTaGGCCTCAGCTTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSHLMA*ASAFSS
Trigger: AGAAGAGAAAGCTGAGGCTCAAGCCATTAAGTGACT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTCAATTCCCACCTGTaGGTGAGAACATGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDFNSHL*VRTCGV
Trigger: AACACCACATGTTCTCACTCACAGGTGGGAATTGAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTGATGGTATGTTTTTaGAGGCTGCACAGTACGACT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLMVCF*RLHSTT
Trigger: AGTCGTACTGTGCAGCCTTCAAAAACATACCATCAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTGAATTCTGATGGTTaGAAATTAAATTTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRALNSDG*KLNLGL
Trigger: CAAGCCCAAATTTAATTTGCAACCATCAGAATTCAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGTGTCTTTTTCAGTTTaGTGGTTTCCCACAGATGGC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDVSFSV*WFPTDG
Trigger: GCCATCTGTGGGAAACCAGCAAACTGAAAAAGACAC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGAGATATTTATTCGTaGATCAAGAGACTTCTGTCA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRARDIYS*IKRLLS
Trigger: TGACAGAAGTCTCTTGATGCACGAATAAATATCTCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGTATGTTACATAAATaGCCACCAGAGTTAAATGAA +
Preference number: 2 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGMLHK*PPELNE
Trigger: TTCATTTAACTCTGGTGGGCATTTATGTAACATACC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTCAGGCTTCCTCTATaGCTTTTTCTTCCCATTCAG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLRLPL*LFLPIQ
Trigger: CTGAATGGGAAGAAAAAGGCATAGAGGAAGCCTGAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTCCTGTCCATACTGTaGATGCTGGGTTATATTTTG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSFLSIL*MLGYIL
Trigger: CAAAATATAACCCAGCATGCACAGTATGGACAGGAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAAATAGAGATGTCCTaGTTGTTCTTTTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKIEMS*LFFCGG
Trigger: CCCTCCACAAAAGAACAAGCAGGACATCTCTATTTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAGAGAAGGAACACTTaGTTGCTGAACTGTTACGTA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKRRNT*LLNCYV
Trigger: TACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCACTCTAGGCTATGCTaGTGCTCCATCAACAGTATT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHSRLC*CSINSI
Trigger: AATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTTCTCCTACAATCATaGACTGTCTACCTCGTCCTA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLLLQS*TVYLVL
Trigger: TAGGACGAGGTAGACAGTGCATGATTGTAGGAGAAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGTCATCAGCATGGTCTaGCTTCAATTTGGAAGACAG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDVISMV*LQFGRQ
Trigger: CTGTCTTCCAAATTGAAGCCAGACCATGCTGATGAC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTGAGGTCATCAGCATaGTCTGGCTTCAATTTGGAA +
Preference number: 2 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLRSSA*SGFNLE
Trigger: TTCCAAATTGAAGCCAGACCATGCTGATGACCTCAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCTCTAGGCAACAGATaGACAATCGCTTGTTTGAAC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDALGNR*TIACLN
Trigger: GTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGGACTAAGAAGATATaGGATGGTGATTCATCAGGA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRTKKI*DGDSSG
Trigger: TCCTGATGAATCACCATCCCATATCTTCTTAGTCCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACAAATTCTAATGTCTaGCCCTCAGAACATCCTTCA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTNSNV*PSEHPS
Trigger: TGAAGGATGTTCTGAGGGCCAGACATTAGAATTTGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCATGGGTTAGTTACTaGGGAAGGCATGAAGCTACA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSWVSY*GRHEAT
Trigger: TGTAGCTTCATGCCTTCCCCAGTAACTAACCCATGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCAAAGTCTATCAAATaGCAAAGGCCAAATCTCAGA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAKSIK*QRPNLR
Trigger: TCTGAGATTTGGCCTTTGCCATTTGATAGACTTTGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTTTTACACTGTTGGTaGGACTGTGAACTAGTTCAA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLLHCW*DCELVQ
Trigger: TTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACACTTTTACACTGTTaGTGGGACTGTGAACTAGTT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTLLHC*WDCELV
Trigger: AACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGCTATATTCAGAGCTaGGGAAGTCTTGCCAACTTA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGYIQS*GSLANL
Trigger: TAAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp CTGATGTCACATTCCTTCCTATTGAGTAAGTACAGATTTAAGTGGTaGGATCTTATTACAGTTGGCCAGAATCAAAGTTACTTAGGGGCT +
Preference number: 2 (lower is better)
Translates to: LMSHSFLLSKYRFKW*DLITVGQNQSYLGA
Trigger: AGCCCCTAAGTAACTTTGATTCTGGCCAACTGTAATAAGATCCAACCACTTAAATCTGTACTTACTCAATAGGAAGGAATGTGACATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp ATCACTCTAGGCTATGCTGCTGCTCCATCAACAGTATTGACAGTTTaGTCAGTGATGGAACTATGGAAACAAAAGCCATCAAATAACATA +
Preference number: 2 (lower is better)
Translates to: ITLGYAAAPSTVLTV*SVMELWKQKPSNNI
Trigger: TATGTTATTTGATGGCTTTTGTTTCCATAGTTCCATCACTGACAAAACTGTCAATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAGGTTAATAGCAGATaGAGAACAGAGACTATCGCG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKVNSR*RTETIA
Trigger: CGCGATAGTCTCTGTTCTTCATCTGCTATTAACCTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTCAGTGATTGTCTTTaGAAGTGTGGTGTAAATGTC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSFSDCL*KCGVNV
Trigger: GACATTTACACCACACTTTCAAAGACAATCACTGAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCATTTAAAGACCTATaGGATACTTCCAAGACAAGG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSFKDL*DTSKTR
Trigger: CCTTGTCTTGGAAGTATCTCATAGGTCTTTAAATGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCACAAGATGACATGGTaGTGCTTCTCTTTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHKMTW*CFSFLV
Trigger: TACCAAGAAAGAGAAGCATCACCATGTCATCTTGTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGAAGATATGGGATGGTaGTTCATCAGGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSEDMGW*FIRKIT
Trigger: TGTTATTTTCCTGATGAATCACCATCCCATATCTTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAATTTCCAGAATCCATaGTATTTTGGCCAATGCAGA +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSNFQNP*YFGQCR
Trigger: TCTGCATTGGCCAAAATATCATGGATTCTGGAAATT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGGACTAGGAAGGGGTaGGAAGTCATTTGCTATTTA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRTRKG*EVICYL
Trigger: TAAATAGCAAATGACTTCTCACCCCTTCCTAGTCCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCACTTTTCTAGTCTGTaGACGTGCATCTCAACCAAA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHFSSL*TCISTK
Trigger: TTTGGTTGAGATGCACGTTCACAGACTAGAAAAGTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAGCCAAGAAACACATaGAAAAATGCTCACCATCAC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQPRNT*KNAHHH
Trigger: GTGATGGTGAGCATTTTTTCATGTGTTTCTTGGCTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGAGGCATATTCAAGTaGATATGGAGCCAACTGACT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRGIFK*IWSQLT
Trigger: AGTCAGTTGGCTCCATATTCACTTGAATATGCCTCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTCATGGATGGCATATaGATTAGCTTGCTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLMDGI*ISLLPV
Trigger: AACAGGAAGCAAGCTAATGCATATGCCATCCATGAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTATATCCCCAAATCTaGCACTTCCCAGCTATGTCA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLYPQI*HFPAMS
Trigger: TGACATAGCTGGGAAGTGGCAGATTTGGGGATATAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTCCAGGGAGGGAAATaGATAAAACACTTATCAGGT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLQGGK*IKHLSG
Trigger: ACCTGATAAGTGTTTTATGCATTTCCCTCCCTGGAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGTAAAATGCAAACTCTaGCCAAATACCAACTCCCCA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDVKCKL*PNTNSP
Trigger: TGGGGAGTTGGTATTTGGGCAGAGTTTGCATTTTAC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATGTTAGTTTCAATTTaGTGCCTACAGAGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDMLVSI*CLQRED
Trigger: GTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTATGTTTTTGAAGGCTaGACAGTACGACTCTGGGTA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYVFEG*TVRLWV
Trigger: TACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCTAAAGCAGGGGTATaGAACATGCTGTCATATTTC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDAKAGV*NMLSYF
Trigger: GAAATATGACAGCATGTTCCATACCCCTGCTTTAGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGGGGAAATTCTCTTTaGGTGATTCCAATTTCGTTT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSWGNSL*VIPISF
Trigger: AAACGAAATTGGAATCACCCAAAGAGAATTTCCCCA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGAAGTGGGAATCTCATaGATGGCATATGCATTAGCT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDEVGIS*MAYALA
Trigger: AGCTAATGCATATGCCATCCATGAGATTCCCACTTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACAGATTTAAGTGGTTaGATCTTATTACAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTDLSG*ILLQLA
Trigger: GGCCAACTGTAATAAGATCCAACCACTTAAATCTGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCCATACTGTGCATGCTaGGTTATATTTTGGCAGATC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDPYCAC*VIFWQI
Trigger: GATCTGCCAAAATATAACCCAGCATGCACAGTATGG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTGCTTGTTCTTTTGTaGAGGGTCAAAGGACATGTA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLLVLL*RVKGHV
Trigger: TACATGTCCTTTGACCCTCCACAAAAGAACAAGCAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGAGGTTTTTGGTGAATaGAATGTAAAGGAACTCTCT +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSEVFGE*NVKELS
Trigger: AGAGAGTTCCTTTACATTCCATTCACCAAAAACCTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGACATTGTTAGCTCATaGATCGGCTCTATCGGAAAT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDDIVSS*IGSIGN
Trigger: ATTTCCGATAGAGCCGATCCATGAGCTAACAATGTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCTAGAAGGATGGCATaGTCCCATGTTAGTTTCAAT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDARRMA*SHVSFN
Trigger: ATTGAAACTAACATGGGACCATGCCATCCTTCTAGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAAGCCTGTGTGCGTaGCTCAGGGAAAATTACTAT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKSLCA*LRENYY
Trigger: ATAGTAATTTTCCCTGAGCCACGCACACAGGCTTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 90 bp TTTAACCTTTACATAAGACTATCTTCCATGGTCATAATCATCAGATaGAAACTCAGAGCAAAGCCATGCTGTGTTTCTTCCCAGTCCATT +
Preference number: 2 (lower is better)
Translates to: FNLYIRLSSMVIIIR*KLRAKPCCVSSQSI
Trigger: AATGGACTGGGAAGAAACACAGCATGGCTTTGCTCTGAGTTTCAATCTGATGATTATGACCATGGAAGATAGTCTTATGTAAAGGTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTTTCCAAGAATCTATaGCCTCAGTCCCTGATGAAA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDFSKNL*PQSLMK
Trigger: TTTCATCAGGGACTGAGGTCATAGATTCTTGGAAAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGGCCTCCCAAAGCATaGTTCTATTTTATTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDWPPKA*FYFIWE
Trigger: TTCCCAAATAAAATAGAATCATGCTTTGGGAGGCCA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGTCATCCAGAGCAATaGGGAAAGCATTTGTACATT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSHPEQ*GKHLYI
Trigger: AATGTACAAATGCTTTCCTCATTGCTCTGGATGACT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTATTTTGATATGTTCTaGAGAGCCCATGATATAGTG +
Preference number: 2 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYFDMF*RAHDIV
Trigger: CACTATATCATGGGCTCTGCAGAACATATCAAAATA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAATGTGCTTCCTTCTaGCCATTGTTTGTTCTTATC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQCASF*PLFVLI
Trigger: GATAAGAACAAACAATGGGCAGAAGGAAGCACATTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATATCTGTGCAAAAATGTaGAAGTCCTTGGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYICAKM*KSLGTK
Trigger: CTTTGTTCCCAAGGACTTCCACATTTTTGCACAGAT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATACATGGGAAAAGAATaGCTACTCTTTACAGTCACA +
Preference number: 2 (lower is better)
Translates to: TCTIALGNRWTIACLNYKYMGKE*LLFTVT
Trigger: TGTGACTGTAAAGAGTAGCCATTCTTTTCCCATGTA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTAATAAGTATGGCTTaGCAGTTGGCAAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLISMA*QLASKC
Trigger: ACACTTGCTTGCCAACTGCCAAGCCATACTTATTAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTTAATAAGTATGGCTTaGCAGTTGGCAAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLISMA*QLASKC
Trigger: ACACTTGCTTGCCAACTGCCAAGCCATACTTATTAA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATATCCCTCAATAAATTaGACTCTCTGCTTTGTCCTA +
Preference number: 2 (lower is better)
Translates to: TCTIALGNRWTIACLNYKYPSIN*TLCFVL
Trigger: TAGGACAAAGCAGAGAGTCCAATTTATTGAGGGATA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGCCTGAAATATTCATaGTTGCACCATATTAATGCC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGLKYS*LHHINA
Trigger: GGCATTAATATGGTGCAACCATGAATATTTCAGGCC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGGACTAAGAAGATATaGGATGGTGATTCATCAGGA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRTKKI*DGDSSG
Trigger: TCCTGATGAATCACCATCCCATATCTTCTTAGTCCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACTACAGGTTTTGTGTaGCACCAAAGAGAACATATG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTTGFV*HQREHM
Trigger: CATATGTTCTCTTTGGTGCCACACAAAACCTGTAGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACAAATTCTAATGTCTaGCCCTCAGAACATCCTTCA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTNSNV*PSEHPS
Trigger: TGAAGGATGTTCTGAGGGCCAGACATTAGAATTTGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGTCACTATAGATTCTaGATTCTGATGGTTGCAAAT +
Preference number: 2 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGHYRF*ILMVAN
Trigger: ATTTGCAACCATCAGAATTCAGAATCTATAGTGACC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGTCACTATAGATTCTaGATTCTGATGGTTGCAAAT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGHYRF*ILMVAN
Trigger: ATTTGCAACCATCAGAATTCAGAATCTATAGTGACC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTCAGTGATTGTCTTTaGAAGTGTGGTGTAAATGTC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDFSDCL*KCGVNV
Trigger: GACATTTACACCACACTTTCAAAGACAATCACTGAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGTGTCTCTCCTTAAGTaGAACATGTTCGAACTTAAT +
Preference number: 2 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYVSLLK*NMFELN
Trigger: ATTAAGTTCGAACATGTTTCACTTAAGGAGAGACAC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTATGCTGGGACACATaGCTTATTTTTGAGTCGATT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLCWDT*LIFESI
Trigger: AATCGACTCAAAAATAAGTCATGTGTCCCAGCATAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGTAAAGAATCAAGTTaGAGTCTCTGTCCTCATTAT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGKESS*SLCPHY
Trigger: ATAATGAGGACAGAGACTTCAACTTGATTCTTTACC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAGTTACTTAGGGGCTaGTTCTCTAACAGTGATTAT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKLLRG*FSNSDY
Trigger: ATAATCACTGTTAGAGAATCAGCCCCTAAGTAACTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAATTTCCAGAATCCATaGTATTTTGGCCAATGCAGA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDNFQNP*YFGQCR
Trigger: TCTGCATTGGCCAAAATATCATGGATTCTGGAAATT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATATGGAGCATAATCTGTaGAAAAATGTGGAAGTCCTT +
Preference number: 2 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYMEHNL*KNVEVL
Trigger: AAGGACTTCCACATTTTTGCACAGATTATGCTCCAT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTTGTATGCTCTGATTTaGAATTGTCAGGCAAAATGG +
Preference number: 2 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLYALI*NCQAKW
Trigger: CCATTTTGCCTGACAATTGCAAATCAGAGCATACAA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATATTTTGATATGTTCTaGAGAGCCCATGATATAGTG +
Preference number: 2 (lower is better)
Translates to: TCTIALGNRWTIACLNYKYFDMF*RAHDIV
Trigger: CACTATATCATGGGCTCTGCAGAACATATCAAAATA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTACATGGGAAAAGAATaGCTACTCTTTACAGTCACA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYMGKE*LLFTVT
Trigger: TGTGACTGTAAAGAGTAGCCATTCTTTTCCCATGTA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCATGCCACCATGTCTaGCTAATTTGGTTTTTATTT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDACHHV*LIWFLF
Trigger: AAATAAAAACCAAATTAGCCAGACATGGTGGCATGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGGGGAAATTCTCTTTaGGTGATTCCAATTTCGTTT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDWGNSL*VIPISF
Trigger: AAACGAAATTGGAATCACCCAAAGAGAATTTCCCCA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACAGATTTAAGTGGTTaGATCTTATTACAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTDLSG*ILLQLA
Trigger: GGCCAACTGTAATAAGATCCAACCACTTAAATCTGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGAGGTTTTTGGTGAATaGAATGTAAAGGAACTCTCT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDEVFGE*NVKELS
Trigger: AGAGAGTTCCTTTACATTCCATTCACCAAAAACCTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAATGACAGCATCCTaGGAAGCAAAGTCTATCAAA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKMTAS*EAKSIK
Trigger: TTTGATAGACTTTGCTTCCCAGGATGCTGTCATTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTGAATTCTGATGGTTaGAAATTAAATTTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLNSDG*KLNLGL
Trigger: CAAGCCCAAATTTAATTTGCAACCATCAGAATTCAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTAAGACTTGTTTTGTaGAGCTACAGAGCTAGAATA +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLRLVL*SYRARI
Trigger: TATTCTAGCTCTGTAGCTCCACAAAACAAGTCTTAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCAGTGATGGAACTATaGAAACAAAAGCCATCAAAT +
Preference number: 2 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSVMEL*KQKPSN
Trigger: ATTTGATGGCTTTTGTTTCCATAGTTCCATCACTGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp CCCAGGCCGGACTGCAGTGGCGCTATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: PRPDCSGAISAH*KLRFPGSRHSP
Trigger: AGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTTCAGTGAGCCGAGATAGCGCCACTGCAGTCCGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp ACGGAGTCTCGCTCTTTCGCCCAGGCCGGACTGCAGTaGCGCTATCTCGGCTCACTGAAAGCTCCGCTTCCC +
Preference number: 3 (lower is better)
Translates to: TESRSFAQAGLQ*RYLGSLKAPLP
Trigger: GGGAAGCGGAGCTTTCAGTGAGCCGAGATAGCGCCACTGCAGTCCGGCCTGGGCGAAAGAGCGAGACTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp TATAGTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTaGCATGCCAGTATTGCTTGGCCAGCGAGGGACAGA +
Preference number: 3 (lower is better)
Translates to: YSEVGNGAQADG*HASIAWPARDR
Trigger: TCTGTCCCTCGCTGGCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCACTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR GCA 72 bp AAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTaGTTGGCCAGCGAGGGACAGAGAAGAGACCACAAC +
Preference number: 3 (lower is better)
Translates to: KWGSGRWVTCQY*LASEGQRRDHN
Trigger: GTTGTGGTCTCTTCTCTGTCCCTCGCTGGCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR GCA 72 bp AAGCTGTATCAGCAAGGGATGCTCAGGGAATGTGTTTaGAGCCCGTTTCACGGTAGCCGCTTGAGAGGGGAT +
Preference number: 3 (lower is better)
Translates to: KLYQQGMLRECV*SPFHGSRLRGD
Trigger: ATCCCCTCTCAAGCGGCTACCGTGAAACGGGCTGCAAACACATTCCCTGAGCATCCCTTGCTGATACAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp TCGCTCTTGGGTCAGGCCCTGCTGATGCAAACACACTaGTATGTATTCTTTCCGCTCATCCTCAGGCAGACT +
Preference number: 3 (lower is better)
Translates to: SLLGQALLMQTH*YVFFPLILRQT
Trigger: AGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGTTTGCATCAGCAGGGCCTGACCCAAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR GCA 72 bp CCTCCAGGTCCTGCCCAGGAGACTGATGGCAGTTTCTaGTTACAGTGCTCTCTCATTCAAAGTTGGGGTAGA +
Preference number: 3 (lower is better)
Translates to: PPGPAQETDGSF*LQCSLIQSWGR
Trigger: TCTACCCCAACTTTGAATGAGAGAGCACTGTAAGCAGAAACTGCCATCAGTCTCCTGGGCAGGACCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp CCTACGGCGGTTTCTGCCTCTGTGGAACGTACATCGTaGTTCATGGGAGAGAGGCTTCTTTTAGGAATCGAG +
Preference number: 3 (lower is better)
Translates to: PTAVSASVERTS*FMGERLLLGIE
Trigger: CTCGATTCCTAAAAGAAGCCTCTCTCCCATGAACCACGATGTACGTTCCACAGAGGCAGAAACCGCCGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCATCTACTGTGTGTTTTaGGACTGGTGTGGTCAGTTG +
Preference number: 3 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGIYCVF*DWCGQL
Trigger: CAACTGACCACACCAGTCCAAAAACACACAGTAGAT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR TCA 72 bp ACATGTGGATTTGCCACCTGGCAGTCAATTGGTCTCTaGATTTCCCTGGATGACTGGGGGCTTGGTAGTCTG +
Preference number: 3 (lower is better)
Translates to: TCGFATWQSIGL*ISLDDWGLGSL
Trigger: CAGACTACCAAGCCCCCAGTCATCCAGGGAAATTCAGAGACCAATTGACTGCCAGGTGGCAAATCCACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp AAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTaGAACGTACATCGTGGTTCATGGGAGAGAGGCTTC +
Preference number: 3 (lower is better)
Translates to: KCIANLRRFLPL*NVHRGSWERGF
Trigger: GAAGCCTCTCTCCCATGAACCACGATGTACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp TTGAGTCAGTCTCGCAAAGAGGCCGGAGTCGGCAAATaGCTATATTCAGAGCTGGGGAAGTCTTGCCAACTT +
Preference number: 3 (lower is better)
Translates to: LSQSRKEAGVGK*LYSELGKSCQL
Trigger: AAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGCCTCTTTGCGAGACTGACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGCTGAGGCAGGAGAATaGCTCAAAATCCGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: THCYVFFPLILRQTYGLSAEAGE*LKIRRW
Trigger: CCACCTCCGGATTTTGAGCAATTCTCCTGCCTCAGC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACGGGGTTTCACCATGTaGACCAGGATGGTCTCGATC +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRGFTM*TRMVSI
Trigger: GATCGAGACCATCCTGGTCAACATGGTGAAACCCCG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp AGAAGTCGATATTGTCCTCTAAGGTGTTCTCAGCTGTaGGCGTGGCTACTTGGAGACAGCACTGGACTTGCA +
Preference number: 3 (lower is better)
Translates to: RSRYCPLRCSQL*AWLLGDSTGLA
Trigger: TGCAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCTTAGAGGACAATATCGACTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp ATATACACCATGGAGGTGAGGCACTTTTCTAGTCTGTaGACGTGCATCTCAACCAAAGCCACCACTCTCCCG +
Preference number: 3 (lower is better)
Translates to: IYTMEVRHFSSL*TCISTKATTLP
Trigger: CGGGAGAGTGGTGGCTTTGGTTGAGATGCACGTTCACAGACTAGAAAAGTGCCTCACCTCCATGGTGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp GGGAATGTGTTTGCAGCCCGTTTCACGGTAGCCGCTTaGGAGGGGATATTGGAAGTGAGTGACTTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: GNVFAARFTVAA*EGILEVSDFLS
Trigger: TGAAAGAAAGTCACTCACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAAACGGGCTGCAAACACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp GGATCGGCTCTATCGGAAATGCCTGTTGCAGCAACATaGACGTGGTGTGCTCTCAGTAAATGTGAATGGAGA +
Preference number: 3 (lower is better)
Translates to: GSALSEMPVAAT*TWCALSKCEWR
Trigger: TCTCCATTCACATTTACTGAGAGCACACCACGTGCATGTTGCTGCAACAGGCATTTCCGATAGAGCCGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp TCCTCTAAGGTGTTCTCAGCTGTGAGCGTGGCTACTTaGAGACAGCACTGGACTTGCAAGACCTGGTTATAT +
Preference number: 3 (lower is better)
Translates to: SSKVFSAVSVAT*RQHWTCKTWLY
Trigger: ATATAACCAGGTCTTGCAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCTTAGAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp GTCCTATTTACATGGACCCTCTCCTATTGCCACCTCTaGGTAAGAATGCATCACTCTAGGCTATGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: VLFTWTLSYCHL*VRMHHSRLCCC
Trigger: GCAGCAGCATAGCCTAGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCATGTAAATAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGTGAGCGTGGCTACTaGGAGACAGCACTGGACTTG +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRACERGY*ETALDL
Trigger: CAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGATGACTGGGGGCTaGGTAGTCTGTAAGAAGTCG +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWMTGG*VVCKKS
Trigger: CGACTTCTTACAGACTACCAAGCCCCCAGTCATCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp CACTGGACTTGCAAGACCTGGTTATATCCCCAAATCTaGCACTTCCCAGCTATGTCACAGCTTTTGGCAAGT +
Preference number: 3 (lower is better)
Translates to: HWTCKTWLYPQI*HFPAMSQLLAS
Trigger: ACTTGCCAAAAGCTGTGACATAGCTGGGAAGTGGCAGATTTGGGGATATAACCAGGTCTTGCAAGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp GTCTACCTCGTCCTATTTACATGGACCCTCTCCTATTaGCACCTCTGGGTAAGAATGCATCACTCTAGGCTA +
Preference number: 3 (lower is better)
Translates to: VYLVLFTWTLSY*HLWVRMHHSRL
Trigger: TAGCCTAGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAGGTAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp CTTAGAAGGAAAGGGAACGACTTGGCAAGTGTAATCTaGCAGCTGGTTGAGTCAGACGACACATTGAGAACG +
Preference number: 3 (lower is better)
Translates to: LRRKGNDLASVI*QLVESDDTLRT
Trigger: CGTTCTCAATGTGTCGTCTGACTCAACCAGCTGGCAGATTACACTTGCCAAGTCGTTCCCTTTCCTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGTCCTAACCTACTACTaGAACCTTATTTCCCAATAT +
Preference number: 3 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPVLTYY*NLISQY
Trigger: ATATTGGGAAATAAGGTTCAAGTAGTAGGTTAGGAC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACTGGTCTCCAACAGATaGGGAGGAAAATGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: THCYVFFPLILRQTYGLSLVSNR*GGKWSS
Trigger: AGAAGACCATTTTCCTCCCAATCTGTTGGAGACCAG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGTATGGCTTGGCAGTaGGCAAGCAAGTGTTTCACT +
Preference number: 3 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSMAWQ*ASKCFT
Trigger: AGTGAAACACTTGCTTGCCAACTGCCAAGCCATACT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCGTGATCGGCCCGCCTaGGCCTCCCAAAGCATGATT +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRDRPA*ASQSMI
Trigger: AATCATGCTTTGGGAGGCCAAGGCGGGCCGATCACG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTCCTGCTTGTTCTTTaGTGGAGGGTCAAAGGACAT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVLLVL*WRVKGH
Trigger: ATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGTGAGCGTGGCTACTaGGAGACAGCACTGGACTTG +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSCERGY*ETALDL
Trigger: CAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCTTCCTTCTGCCCATaGTTTGTTCTTATCAGTGGC +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVASFCP*FVLISG
Trigger: GCCACTGATAAGAACAAACAATGGGCAGAAGGAAGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp CTAGAAGGATGGCATGGTCCCATGTTAGTTTCAATTTaGTGCCTACAGAGGGAGGACCAAGGCACTTTAACT +
Preference number: 3 (lower is better)
Translates to: LEGWHGPMLVSI*CLQREDQGTLT
Trigger: AGTTAAAGTGCCTTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp TGCCACCTCTGGGTAAGAATGCATCACTCTAGGCTATaGTGCTGCTCCATCAACAGTATTGACAGTTTTGTC +
Preference number: 3 (lower is better)
Translates to: CHLWVRMHHSRL*CCSINSIDSFV
Trigger: GACAAAACTGTCAATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGATGCATTCTTACCCAGAGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp AATCATGTCCTCCCTTCAACCCTTCTCCTACAATCATaGACTGTCTACCTCGTCCTATTTACATGGACCCTC +
Preference number: 3 (lower is better)
Translates to: NHVLPSTLLLQS*TVYLVLFTWTL
Trigger: GAGGGTCCATGTAAATAGGACGAGGTAGACAGTGCATGATTGTAGGAGAAGGGTTGAAGGGAGGACATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp GGAAGCAACACTGTATCATGTACTACAGGTTTTGTGTaGCACCAAAGAGAACATATGCCCCAAAGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: GSNTVSCTTGFV*HQREHMPQRLA
Trigger: AGCCAGCCTTTGGGGCATATGTTCTCTTTGGTGCCACACAAAACCTGTAGTACATGATACAGTGTTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp GGCAGTTTCTGCTTACAGTGCTCTCTCATTCAAAGTTaGGGTAGAAGAAGCCACAATCATGGTCTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: GSFCLQCSLIQS*GRRSHNHGLPH
Trigger: ATGGGGAAGACCATGATTGTGGCTTCTTCTACCCCAACTTTGAATGAGAGAGCACTGTAAGCAGAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp CACTGTTGGTGGGACTGTGAACTAGTTCAACCATTGTaGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAA +
Preference number: 3 (lower is better)
Translates to: HCWWDCELVQPL*KSVWRFLRDLE
Trigger: TTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp AAGAGGCCGGAGTCGGCAAATGGCTATATTCAGAGCTaGGGAAGTCTTGCCAACTTAACTGTAGCTGTTAAA +
Preference number: 3 (lower is better)
Translates to: KRPESANGYIQS*GSLANLTVAVK
Trigger: TTTAACAGCTACAGTTAAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp CTACAATCATGCACTGTCTACCTCGTCCTATTTACATaGACCCTCTCCTATTGCCACCTCTGGGTAAGAATG +
Preference number: 3 (lower is better)
Translates to: LQSCTVYLVLFT*TLSYCHLWVRM
Trigger: CATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAGGTAGACAGTGCATGATTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGTATGGCTTGGCAGTaGGCAAGCAAGTGTTTCACT +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRASMAWQ*ASKCFT
Trigger: AGTGAAACACTTGCTTGCCAACTGCCAAGCCATACT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGAGACACAGTTGACATaGCCTCCCAAAACTAACATG +
Preference number: 3 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFETQLT*PPKTNM
Trigger: CATGTTAGTTTTGGGAGGCAATGTCAACTGTGTCTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCAGCCGACACAGATTaGACAAGAGAAGCCCAAACC +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAADTD*TREAQT
Trigger: GGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGTGTCTTTTTCAGTTaGCTGGTTTCCCACAGATGG +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGVFFS*LVSHRW
Trigger: CCATCTGTGGGAAACCAGCAAACTGAAAAAGACACC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATAGAGATGTCCTGCTaGTTCTTTTGTGGAGGGTCA +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVIEMSC*FFCGGS
Trigger: TGACCCTCCACAAAAGAACAAGCAGGACATCTCTAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCTTCCTTCTGCCCATaGTTTGTTCTTATCAGTGGC +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAASFCP*FVLISG
Trigger: GCCACTGATAAGAACAAACAATGGGCAGAAGGAAGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp AGAGTGCACCAAACGAGCGATCCCAAGAAATGGACTTaGGGCACATTTTGCAGAGGTGTCTTTTTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: RVHQTSDPKKWT*GTFCRGVFFSL
Trigger: CAAACTGAAAAAGACACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp TCCCAAGGAATAAGCAGGTGGATGATGATACTGGCTTaGTGGATGATAACACTCCAGGGAGGGAAATGCATA +
Preference number: 3 (lower is better)
Translates to: SQGISRWMMILA*WMITLQGGKCI
Trigger: TATGCATTTCCCTCCCTGGAGTGTTATCATCCATCAAGCCAGTATCATCATCCACCTGCTTATTCCTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp TTATCTCAGCACCTACTCTTTCTGATGGTATGTTTTTaGAGGCTGCACAGTACGACTCTGGGTACCGTGTGT +
Preference number: 3 (lower is better)
Translates to: LSQHLLFLMVCF*RLHSTTLGTVC
Trigger: ACACACGGTACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATACCATCAGAAAGAGTAGGTGCTGAGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp GTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTaGAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTG +
Preference number: 3 (lower is better)
Translates to: VLSWARDTTQGE*KVEGLQQKFGL
Trigger: CAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
3UTR GCA 72 bp AAGTATATGTTGTTCTCTGATTGTCTCCCACGAGAGTaGACCAAACGAGCGATCCCAAGAAATGGACTTGAG +
Preference number: 3 (lower is better)
Translates to: KYMLFSDCLPRE*TKRAIPRNGLE
Trigger: CTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGACAATCAGAGAACAACATATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp GAAGGATGGCATGGTCCCATGTTAGTTTCAATTTGCTaGCTACAGAGGGAGGACCAAGGCACTTTAACTATT +
Preference number: 3 (lower is better)
Translates to: EGWHGPMLVSIC*LQREDQGTLTI
Trigger: AATAGTTAAAGTGCCTTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp CACCTCTGGGTAAGAATGCATCACTCTAGGCTATGCTaGTGCTCCATCAACAGTATTGACAGTTTTGTCAGT +
Preference number: 3 (lower is better)
Translates to: HLWVRMHHSRLC*CSINSIDSFVS
Trigger: ACTGACAAAACTGTCAATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGATGCATTCTTACCCAGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAAAGCACCTGTGAGTaGGCAGACTCACCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKSTCE*ADSPRK
Trigger: TTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTTAATAAGTATGGCTaGGCAGTTGGCAAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRALNKYG*AVGKQV
Trigger: CACTTGCTTGCCAACTGCCAAGCCATACTTATTAAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGAGACACAGTTGACATaGCCTCCCAAAACTAACATG +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAETQLT*PPKTNM
Trigger: CATGTTAGTTTTGGGAGGCAATGTCAACTGTGTCTC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAATTCAGAGACACAGTaGACATTGCCTCCCAAAACT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVNSETQ*TLPPKT
Trigger: AGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAATT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTATCCCTCAATAAATaGGACTCTCTGCTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLSLNK*DSLLCP
Trigger: AGGACAAAGCAGAGAGTCCAATTTATTGAGGGATAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGAGTCCACAATTTTTaGCACAAGGGCCAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRVHNF*HKGQEN
Trigger: ATTTTCCTGGCCCTTGTGCAAAAAATTGTGGACTCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCCCATGTTTCCCTGTaGTGCCTTAAATACTCTTTT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVAHVSL*CLKYSF
Trigger: AAAAGAGTATTTAAGGCACAACAGGGAAACATGGGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGAATCCATGATATTTaGGCCAATGCAGAGGGTCTT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRIHDI*ANAEGL
Trigger: AAGACCCTCTGCATTGGCCAAAATATCATGGATTCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAGTCACTTAATGGCTaGAGCCTCAGCTTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKSLNG*SLSFLF
Trigger: GAAGAGAAAGCTGAGGCTCAAGCCATTAAGTGACTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACCTTCTGCCCATTGTTaGTTCTTATCAGTGGCCTTT +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAPSAHC*FLSVAF
Trigger: AAAGGCCACTGATAAGAACAAACAATGGGCAGAAGG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTCTGGGGAAATTTATaGCAATGTGCTTCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRALWGNL*QCASFC
Trigger: GCAGAAGGAAGCACATTGCAATAAATTTCCCCAGAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTATCGGAAATGCCTGTaGCAGCAACATGCACGTGGT +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYRKCL*QQHARG
Trigger: ACCACGTGCATGTTGCTGCAACAGGCATTTCCGATA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp GCTATGTCACAGCTTTTGGCAAGTCACTTAATGGCTTaGGCCTCAGCTTTCTCTTCTAGAATAGGGGTACTA +
Preference number: 3 (lower is better)
Translates to: AMSQLLASHLMA*ASAFSSRIGVL
Trigger: TAGTACCCCTATTCTAGAAGAGAAAGCTGAGGCTCAAGCCATTAAGTGACTTGCCAAAAGCTGTGACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp TCCCACAAGAAGACACAGATGTGTGCAAGCTCTAAATaGTCTCTAAAGACCGCAGTACACATGTGGATTTGC +
Preference number: 3 (lower is better)
Translates to: SHKKTQMCASSK*SLKTAVHMWIC
Trigger: GCAAATCCACATGTGTACTGCGGTCTTTAGAGATCATTTAGAGCTTGCACACATCTGTGTCTTCTTGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp TGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTaGCACCAATTCTTTACCAAAGTATTCCGGATGCTC +
Preference number: 3 (lower is better)
Translates to: CERHWFKGLRFK*HQFFTKVFRML
Trigger: GAGCATCCGGAATACTTTGGTAAAGAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR GCA 72 bp AGGTTACATCAGTGTTTCCCTGATCTCCCTAGCAGCTaGCATAATTTCCCCAACACCCTTCAAAACTTGATA +
Preference number: 3 (lower is better)
Translates to: RLHQCFPDLPSS*HNFPNTLQNLI
Trigger: TATCAAGTTTTGAAGGGTGTTGGGGAAATTATGGCAGCTGCTAGGGAGATCAGGGAAACACTGATGTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp ATAAAGTTCATGGAGGGCTGCTTCCTGTCCATACTGTaGATGCTGGGTTATATTTTGGCAGATCATCTTCTC +
Preference number: 3 (lower is better)
Translates to: IKFMEGCFLSIL*MLGYILADHLL
Trigger: GAGAAGATGATCTGCCAAAATATAACCCAGCATGCACAGTATGGACAGGAAGCAGCCCTCCATGAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp AGAGGTGTCTTTTTCAGTTTGCTGGTTTCCCACAGATaGCTAAAGCAGGGGTATGGAACATGCTGTCATATT +
Preference number: 3 (lower is better)
Translates to: RGVFFSLLVSHR*LKQGYGTCCHI
Trigger: AATATGACAGCATGTTCCATACCCCTGCTTTAGCCATCTGTGGGAAACCAGCAAACTGAAAAAGACACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp CAGATAAAAGGGGTGTACTGTTCATGGGTTAGTTACTaGGGAAGGCATGAAGCTACACAACAACTGTCAGAA +
Preference number: 3 (lower is better)
Translates to: QIKGVYCSWVSY*GRHEATQQLSE
Trigger: TTCTGACAGTTGTTGTGTAGCTTCATGCCTTCCCCAGTAACTAACCCATGAACAGTACACCCCTTTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp CAGTTCAGACTTCTCCATTATGCTAGAAGGATGGCATaGTCCCATGTTAGTTTCAATTTGCTGCCTACAGAG +
Preference number: 3 (lower is better)
Translates to: QFRLLHYARRMA*SHVSFNLLPTE
Trigger: CTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGCATAATGGAGAAGTCTGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp CTCCTCAGTTCAGACTTCTCCATTATGCTAGAAGGATaGCATGGTCCCATGTTAGTTTCAATTTGCTGCCTA +
Preference number: 3 (lower is better)
Translates to: LLSSDFSIMLEG*HGPMLVSICCL
Trigger: TAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGCATAATGGAGAAGTCTGAACTGAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGTTATTCATCCCCATTaGGCAATGATTACTTACCAG +
Preference number: 3 (lower is better)
Translates to: THCYVFFPLILRQTYGLSVIHPH*AMITYQ
Trigger: CTGGTAAGTAATCATTGCCAAATGGGGATGAATAAC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAAAAGCACCTGTGAGTaGGCAGACTCACCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKKSTCE*ADSPRK
Trigger: TTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTTTTCCAATTAGCCTaGATCACTGGTCACTATAGA +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLFQLA*ITGHYR
Trigger: TCTATAGTGACCAGTGATCAAGGCTAATTGGAAAAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAAAATGGCTGGAAGTaGTGTTTTCAGAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKNGWK*CFQSPV
Trigger: GACAGGACTCTGAAAACACAACTTCCAGCCATTTTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCAGCCGACACAGATTaGACAAGAGAAGCCCAAACC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDAADTD*TREAQT
Trigger: GGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGAGTCCACAATTTTTaGCACAAGGGCCAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRARVHNF*HKGQEN
Trigger: ATTTTCCTGGCCCTTGTGCAAAAAATTGTGGACTCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGAAAAGCTGAATGAGTaGGTGATATCAGACATGAAG +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVEKLNE*VISDMK
Trigger: CTTCATGTCTGATATCACCAACTCATTCAGCTTTTC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTGGGGAAATTCTCTTaGGGTGATTCCAATTTCGTT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLGKFS*GDSNFV
Trigger: AACGAAATTGGAATCACCCAAAGAGAATTTCCCCAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGAATCCATGATATTTaGGCCAATGCAGAGGGTCTT +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRARIHDI*ANAEGL
Trigger: AAGACCCTCTGCATTGGCCAAAATATCATGGATTCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp TTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTaGAGGTCTTCAGCAAAAATTTGGACTGTAAACACA +
Preference number: 3 (lower is better)
Translates to: LGKRYHTGRVQS*RSSAKIWTVNT
Trigger: TGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
3UTR TCA 72 bp CATTATCAGCCCTATTGTCAAATAGTCAGTGCTACTTaGGGTCATCAGCATGGTCTGGCTTCAATTTGGAAG +
Preference number: 3 (lower is better)
Translates to: HYQPYCQIVSAT*GHQHGLASIWK
Trigger: CTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAATAGGGCTGATAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp ATGCATAATAAAGATTGTAAGCAAGCAGTATTCTGCTaGCGATGCCACAGGGATGGGTCTGTGACAGCATTT +
Preference number: 3 (lower is better)
Translates to: MHNKDCKQAVFC*RCHRDGSVTAF
Trigger: AAATGCTGTCACAGACCCATCCCTGTGGCATCGTCAGCAGAATACTGCTTGCTTACAATCTTTATTATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp GAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTaGCCCAGCCATCCCATTACTGGGTATATACCCAAA +
Preference number: 3 (lower is better)
Translates to: EIPQGSRTRNTI*PSHPITGYIPK
Trigger: TTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp CAAACAGAGGCATATTCAAGTGAATATGGAGCCAACTaGCTTAGAAGGAAAGGGAACGACTTGGCAAGTGTA +
Preference number: 3 (lower is better)
Translates to: QTEAYSSEYGAN*LRRKGNDLASV
Trigger: TACACTTGCCAAGTCGTTCCCTTTCCTTCTAAGTCAGTTGGCTCCATATTCACTTGAATATGCCTCTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp CCGATTACATTATCAGCCCTATTGTCAAATAGTCAGTaGTACTTGAGGTCATCAGCATGGTCTGGCTTCAAT +
Preference number: 3 (lower is better)
Translates to: PITLSALLSNSQ*YLRSSAWSGFN
Trigger: ATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAATAGGGCTGATAATGTAATCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp TTGTCAAATAGTCAGTGCTACTTGAGGTCATCAGCATaGTCTGGCTTCAATTTGGAAGACAGGAATTCAGAG +
Preference number: 3 (lower is better)
Translates to: LSNSQCYLRSSA*SGFNLEDRNSE
Trigger: CTCTGAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp GACTGTGAACTAGTTCAACCATTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTAGAACTAGAAATACCA +
Preference number: 3 (lower is better)
Translates to: DCELVQPLWKSV*RFLRDLELEIP
Trigger: TGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAACTGTTCTCCATGCATaGTTGTTAATCTCCATCAAT +
Preference number: 3 (lower is better)
Translates to: THCYVFFPLILRQTYGLSTVLHA*LLISIN
Trigger: ATTGATGGAGATTAACAACAATGCATGGAGAACAGT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAAATGTGGAAGTCCTaGGGAACAAAGGCCCATCAA +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKMWKS*GTKAHQ
Trigger: TTGATGGGCCTTTGTTCCCAAGGACTTCCACATTTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTTGTATGCTCTGATTaGCAATTGTCAGGCAAAATG +
Preference number: 3 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFFVCSD*QLSGKM
Trigger: CATTTTGCCTGACAATTGCAAATCAGAGCATACAAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTTAATAAGTATGGCTaGGCAGTTGGCAAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLNKYG*AVGKQV
Trigger: CACTTGCTTGCCAACTGCCAAGCCATACTTATTAAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATCTTTTTCTCTCTGTaGCAGGCAAAATTTCATGCA +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVIFFSL*QAKFHA
Trigger: TGCATGAAATTTTGCCTGCAACAGAGAGAAAAAGAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACCCAGAAAAGTAATTTaGATCAGAGAAGTTGCTCCT +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAPRKVI*IREVAP
Trigger: AGGAGCAACTTCTCTGATCAAAATTACTTTTCTGGG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGATCTTATTACAGTaGGCCAGAATCAAAGTTACT +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWILLQ*ARIKVT
Trigger: AGTAACTTTGATTCTGGCCAACTGTAATAAGATCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATACAGATTTAAGTGGTaGGATCTTATTACAGTTGGC +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVYRFKW*DLITVG
Trigger: GCCAACTGTAATAAGATCCAACCACTTAAATCTGTA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCATGTACTACAGGTTTaGTGTGGCACCAAAGAGAAC +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHVLQV*CGTKEN
Trigger: GTTCTCTTTGGTGCCACACAAAACCTGTAGTACATG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTTTTGACTTCTTCCTaGTTAGACATGGGGATTATA +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLLTSS*LDMGII
Trigger: TATAATCCCCATGTCTAACAAGGAAGAAGTCAAAAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGAGACAGCACTGGACTaGCAAGACCTGGTTATATCC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDETALD*QDLVIS
Trigger: GGATATAACCAGGTCTTGCAAGTCCAGTGCTGTCTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGTAAGAAGTCGATATaGTCCTCTAAGGTGTTCTCA +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRACKKSI*SSKVFS
Trigger: TGAGAACACCTTAGAGGACAATATCGACTTCTTACA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTAAATGATATGGTCTaGGTTGATATTCTGAACCTG +
Preference number: 3 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLNDMV*VDILNL
Trigger: CAGGTTCAGAATATCAACCAAGACCATATCATTTAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGAAGGATCAGCTTTCTaGGAAGGGGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDEGSAF*EGVCVC
Trigger: ACACACACACACCCCTTCCAAGAAAGCTGATCCTTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATGGACCCTCTCCTATaGCCACCTCTGGGTAAGAAT +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDMDPLL*PPLGKN
Trigger: ATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGGAAAGGGAACGACTaGGCAAGTGTAATCTGCCAG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRKGND*ASVICQ
Trigger: CTGGCAGATTACACTTGCCAAGTCGTTCCCTTTCCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp GAAGACAAGGATAAAAGGAAAAGGTTGAATGGAATATaGACTGACCCAGAAGTGGGAATCTCATGGATGGCA +
Preference number: 3 (lower is better)
Translates to: EDKDKRKRLNGI*TDPEVGISWMA
Trigger: TGCCATCCATGAGATTCCCACTTCTGGGTCAGTTCATATTCCATTCAACCTTTTCCTTTTATCCTTGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp AGAAATAAGAACACTTTTACACTGTTGGTGGGACTGTaGACTAGTTCAACCATTGTGGAAGTCAGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: RNKNTFTLLVGL*TSSTIVEVSVE
Trigger: CTCCACACTGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGTTCTTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp CACTGGCCATCAGAGAAATGCAAATCAAAACCACTATaGGATACCATCTCACACCAGTTAGAATGGCAATCA +
Preference number: 3 (lower is better)
Translates to: HWPSEKCKSKPL*DTISHQLEWQS
Trigger: TGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp AATGGACTCAGACTCAATAGGAAAATAGAGATGTCCTaGTTGTTCTTTTGTGGAGGGTCAAAGGACATGTAC +
Preference number: 3 (lower is better)
Translates to: NGLRLNRKIEMS*LFFCGGSKDMY
Trigger: GTACATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGACATCTCTATTTTCCTATTGAGTCTGAGTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp TGCATCAGCTATGTGATTTTATTTGAAGTTCTGTCTTaGGCAAGAGATACCACACAGGGAGAGTGCAAAGTT +
Preference number: 3 (lower is better)
Translates to: CISYVILFEVLS*ARDTTQGECKV
Trigger: AACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTCAAATAAAATCACATAGCTGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
3UTR CCA 72 bp AAAATGGTCTTCTACCACAGAAAATGTGAAAGGCACTaGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTC +
Preference number: 3 (lower is better)
Translates to: KMVFYHRKCERH*FKGLRFKCHQF
Trigger: GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGAAGACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CCA 72 bp TCTCTATTTGTCCTTAAAGCAGTGCCACTCAAAAAGTaGTCCATGGATGGGTGTCTAAGAAATGCTTATCAC +
Preference number: 3 (lower is better)
Translates to: SLFVLKAVPLKK*SMDGCLRNAYH
Trigger: GTGATAAGCATTTCTTAGACACCCATCCATGGACCACTTTTTGAGTGGCACTGCTTTAAGGACAAATAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CCA 72 bp GGATGTGGAGAAATAAGAACACTTTTACACTGTTGGTaGGACTGTGAACTAGTTCAACCATTGTGGAAGTCA +
Preference number: 3 (lower is better)
Translates to: GCGEIRTLLHCW*DCELVQPLWKS
Trigger: TGACTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGTTCTTATTTCTCCACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp AGAGGATGTGGAGAAATAAGAACACTTTTACACTGTTaGTGGGACTGTGAACTAGTTCAACCATTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: RGCGEIRTLLHC*WDCELVQPLWK
Trigger: CTTCCACAATGGTTGAACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGTTCTTATTTCTCCACATCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATGCTCTGATTTGCAATaGTCAGGCAAAATGGACCTG +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKCSDLQ*SGKMDL
Trigger: CAGGTCCATTTTGCCTGACAATTGCAAATCAGAGCA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGTATGGCTTGGCAGTaGGCAAGCAAGTGTTTCACT +
Preference number: 3 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYSMAWQ*ASKCFT
Trigger: AGTGAAACACTTGCTTGCCAACTGCCAAGCCATACT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAATAGTCAGTGCTACTaGAGGTCATCAGCATGGTCT +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKNSQCY*RSSAWS
Trigger: AGACCATGCTGATGACCTCAAGTAGCACTGACTATT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATCTTTTTCTCTCTGTaGCAGGCAAAATTTCATGCA +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAIFFSL*QAKFHA
Trigger: TGCATGAAATTTTGCCTGCAACAGAGAGAAAAAGAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTAAGAAATCCTATTTaGATATGTTCTGCAGAGCCC +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRALRNPI*ICSAEP
Trigger: GGGCTCTGCAGAACATATCAAAATAGGATTTCTTAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGTATGGTCTGGGGGTaGAAAAATTTAAGAAATCCT +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRASMVWG*KNLRNP
Trigger: AGGATTTCTTAAATTTTTCAACCCCCAGACCATACT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGTGTCTTTTTCAGTTaGCTGGTTTCCCACAGATGG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGVFFS*LVSHRW
Trigger: CCATCTGTGGGAAACCAGCAAACTGAAAAAGACACC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCCCAAGAAATGGACTaGAGGCACATTTTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSQEMD*RHILQR
Trigger: CCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGAGTCCACAATTTTTaGCACAAGGGCCAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRVHNF*HKGQEN
Trigger: ATTTTCCTGGCCCTTGTGCAAAAAATTGTGGACTCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACATTCAGTGCCAAGTaGACTGAATGCGATTGTGGC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTFSAK*TECDCG
Trigger: GCCACAATCGCATTCAGTCAACTTGGCACTGAATGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGGATCTTATTACAGTaGGCCAGAATCAAAGTTACT +
Preference number: 3 (lower is better)
Translates to: QEKEHLLAELLRRATSRAWILLQ*ARIKVT
Trigger: AGTAACTTTGATTCTGGCCAACTGTAATAAGATCCA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCCCATGTTTCCCTGTaGTGCCTTAAATACTCTTTT +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAHVSL*CLKYSF
Trigger: AAAAGAGTATTTAAGGCACAACAGGGAAACATGGGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTAAGTGGAGGTATCTaGCTTTGCCCAAACAGAGGC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLSGGI*LCPNRG
Trigger: GCCTCTGTTTGGGCAAAGCAAGATACCTCCACTTAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAATGTGGAAGTCCTaGGGAACAAAGGCCCATCAA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKMWKS*GTKAHQ
Trigger: TTGATGGGCCTTTGTTCCCAAGGACTTCCACATTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTTTTCCAATTAGCCTaGATCACTGGTCACTATAGA +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLFQLA*ITGHYR
Trigger: TCTATAGTGACCAGTGATCAAGGCTAATTGGAAAAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGCTCTGATTTGCAATaGTCAGGCAAAATGGACCTG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDCSDLQ*SGKMDL
Trigger: CAGGTCCATTTTGCCTGACAATTGCAAATCAGAGCA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTTAATAAGTATGGCTaGGCAGTTGGCAAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLNKYG*AVGKQV
Trigger: CACTTGCTTGCCAACTGCCAAGCCATACTTATTAAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAATAGTCAGTGCTACTaGAGGTCATCAGCATGGTCT +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDNSQCY*RSSAWS
Trigger: AGACCATGCTGATGACCTCAAGTAGCACTGACTATT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAAAAATGGCTGGAAGTaGTGTTTTCAGAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKKNGWK*CFQSPV
Trigger: GACAGGACTCTGAAAACACAACTTCCAGCCATTTTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAACACCCTTCAAAACTaGATAATGGAAGGATCAGGG +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKNTLQN*IMEGSG
Trigger: CCCTGATCCTTCCATTATCAAGTTTTGAAGGGTGTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATAGAGATGTCCTGCTaGTTCTTTTGTGGAGGGTCA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDIEMSC*FFCGGS
Trigger: TGACCCTCCACAAAAGAACAAGCAGGACATCTCTAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTCTGGGGAAATTTATaGCAATGTGCTTCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLWGNL*QCASFC
Trigger: GCAGAAGGAAGCACATTGCAATAAATTTCCCCAGAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGAAGGAACACTTGCTaGCTGAACTGTTACGTAGAG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRRNTC*LNCYVE
Trigger: CTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCATTTGCTATTTAACTaGGCTCTCATTAGTCCCAAG +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHLLFN*ALISPK
Trigger: CTTGGGACTAATGAGAGCCAAGTTAAATAGCAAATG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGGGTGAGAAGTCATTaGCTATTTAACTTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGVRSH*LFNLAL
Trigger: GAGAGCCAAGTTAAATAGCAAATGACTTCTCACCCC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCATGTTAGTTTCAATTaGCTGCCTACAGAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHVSFN*LPTEGG
Trigger: TCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAGAAGATCACAGATTaGAGTCAGTCTCGCAAAGAG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQKITD*SQSRKE
Trigger: CTCTTTGCGAGACTGACTCAAATCTGTGATCTTCTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCTGATGGTATGTTTTaGAAGGCTGCACAGTACGAC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSDGMF*KAAQYD
Trigger: GTCGTACTGTGCAGCCTTCAAAAACATACCATCAGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp TCATCTACTGTGTGTTTTTGGACTGGTGTGGTCAGTTaGCCTGTCATTACATATTCCCATATAGGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: SSTVCFWTGVVS*PVITYSHIGAK
Trigger: TTTTGCTCCTATATGGGAATATGTAATGACAGGTCAACTGACCACACCAGTCCAAAAACACACAGTAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR TCA 72 bp ACTCTCTATAGTGGTGTAGAACACAAGATGACATGGTaGTGCTTCTCTTTCTTGGTAGAACATTCCATTCGT +
Preference number: 3 (lower is better)
Translates to: TLYSGVEHKMTW*CFSFLVEHSIR
Trigger: ACGAATGGAATGTTCTACCAAGAAAGAGAAGCATCACCATGTCATCTTGTGTTCTACACCACTATAGAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp TTTCTGAACAATTTTAACCTCACTGAGGACAGGTTATaGGTCCACAGAACCTCACAATCGGCATATAATTCA +
Preference number: 3 (lower is better)
Translates to: FLNNFNLTEDRL*VHRTSQSAYNS
Trigger: TGAATTATATGCCGATTGTGAGGTTCTGTGGACGCATAACCTGTCCTCAGTGAGGTTAAAATTGTTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CCA 72 bp GTACTAATAACTGTCCTCCCTGCGCTATTTTCTGTGTaGAAGCAGTTTGTAAGCTCTCTTAGGAATTACTAT +
Preference number: 3 (lower is better)
Translates to: VLITVLPALFSV*KQFVSSLRNYY
Trigger: ATAGTAATTCCTAAGAGAGCTTACAAACTGCTTCCACACAGAAAATAGCGCAGGGAGGACAGTTATTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp TCTGAACCTGACAGTTCCAGAGAGGTTTTTGGTGAATaGAATGTAAAGGAACTCTCTCTGGGGAAATTTATT +
Preference number: 3 (lower is better)
Translates to: SEPDSSREVFGE*NVKELSLGKFI
Trigger: AATAAATTTCCCCAGAGAGAGTTCCTTTACATTCCATTCACCAAAAACCTCTCTGGAACTGTCAGGTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp AAATGTCCAACAATGATAGACTGGATTAAGAAAAGGTaGCACATATACACCATGGAGGTGAGGCACTTTTCT +
Preference number: 3 (lower is better)
Translates to: KCPTMIDWIKKR*HIYTMEVRHFS
Trigger: AGAAAAGTGCCTCACCTCCATGGTGTATATGTGCCACCTTTTCTTAATCCAGTCTATCATTGTTGGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp GAAGTGCTCAAATTGTGTCTTCTATTAATCCATTCCTaGGGTGGGAATACTCTGTCTATTCGACAAGAATCA +
Preference number: 3 (lower is better)
Translates to: EVLKLCLLLIHS*GGNTLSIRQES
Trigger: TGATTCTTGTCGAATAGACAGAGTATTCCCACCCCAGGAATGGATTAATAGAAGACACAATTTGAGCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGACTATCGCGTAGTTaGATGGCCTTTACTCTAGTA +
Preference number: 3 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRLSRS*MAFTLV
Trigger: TACTAGAGTAAAGGCCATCAAACTACGCGATAGTCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGACTATCGCGTAGTTaGATGGCCTTTACTCTAGTA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRLSRS*MAFTLV
Trigger: TACTAGAGTAAAGGCCATCAAACTACGCGATAGTCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTTTTCCAATTAGCCTaGATCACTGGTCACTATAGA +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLFQLA*ITGHYR
Trigger: TCTATAGTGACCAGTGATCAAGGCTAATTGGAAAAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAATTCAGAGACACAGTaGACATTGCCTCCCAAAACT +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDNSETQ*TLPPKT
Trigger: AGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAATT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACATTATCAGCCCTATaGTCAAATAGTCAGTGCTAC +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTLSAL*SNSQCY
Trigger: GTAGCACTGACTATTTGACAATAGGGCTGATAATGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTATCCCTCAATAAATaGGACTCTCTGCTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLSLNK*DSLLCP
Trigger: AGGACAAAGCAGAGAGTCCAATTTATTGAGGGATAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAAATGGCTGGAAGTaGTGTTTTCAGAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKNGWK*CFQSPV
Trigger: GACAGGACTCTGAAAACACAACTTCCAGCCATTTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAACACCCTTCAAAACTaGATAATGGAAGGATCAGGG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDNTLQN*IMEGSG
Trigger: CCCTGATCCTTCCATTATCAAGTTTTGAAGGGTGTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTTTTGACTTCTTCCTaGTTAGACATGGGGATTATA +
Preference number: 3 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLLTSS*LDMGII
Trigger: TATAATCCCCATGTCTAACAAGGAAGAAGTCAAAAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp GTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTTTTaGAGACAATACAATTGTATGATCCCTAAATATGGG +
Preference number: 3 (lower is better)
Translates to: VCVCVYVCVCVF*RQYNCMIPKYG
Trigger: CCCATATTTAGGGATCATACAATTGTATTGTCTTCAAAACACACACACACACACATACACACACACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp ATGGAATGTAAAGGAACTCTCTCTGGGGAAATTTATTaGAATGTGCTTCCTTCTGCCCATTGTTTGTTCTTA +
Preference number: 3 (lower is better)
Translates to: MECKGTLSGEIY*NVLPSAHCLFL
Trigger: TAAGAACAAACAATGGGCAGAAGGAAGCACATTGCAATAAATTTCCCCAGAGAGAGTTCCTTTACATTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CCA 72 bp GCTCAAATTGTGTCTTCTATTAATCCATTCCTGGGGTaGGAATACTCTGTCTATTCGACAAGAATCATTTTC +
Preference number: 3 (lower is better)
Translates to: AQIVSSINPFLG*EYSVYSTRIIF
Trigger: GAAAATGATTCTTGTCGAATAGACAGAGTATTCCCACCCCAGGAATGGATTAATAGAAGACACAATTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTTGTATGCTCTGATTaGCAATTGTCAGGCAAAATG +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKFVCSD*QLSGKM
Trigger: CATTTTGCCTGACAATTGCAAATCAGAGCATACAAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACATTATCAGCCCTATaGTCAAATAGTCAGTGCTAC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTLSAL*SNSQCY
Trigger: GTAGCACTGACTATTTGACAATAGGGCTGATAATGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGTATGGTCTGGGGGTaGAAAAATTTAAGAAATCCT +
Preference number: 3 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSMVWG*KNLRNP
Trigger: AGGATTTCTTAAATTTTTCAACCCCCAGACCATACT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGAAAAGCTGAATGAGTaGGTGATATCAGACATGAAG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDEKLNE*VISDMK
Trigger: CTTCATGTCTGATATCACCAACTCATTCAGCTTTTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATGCTGGGTTATATTTaGGCAGATCATCTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDMLGYI*ADHLLF
Trigger: GAAGAGAAGATGATCTGCCAAAATATAACCCAGCAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATTTGTTTTCAGACATaGTTAGCTCATGGATCGGCT +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDICFQT*LAHGSA
Trigger: AGCCGATCCATGAGCTAACAATGTCTGAAAACAAAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACAGTATTGACAGTTTaGTCAGTGATGGAACTATGG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTVLTV*SVMELW
Trigger: CCATAGTTCCATCACTGACAAAACTGTCAATACTGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp TATGTACTCCATAAAGTCTTACTAATGTCACTGGAATaGCTCTTCCTGATGTCACATTCCTTCCTATTGAGT +
Preference number: 3 (lower is better)
Translates to: YVLHKVLLMSLE*LFLMSHSFLLS
Trigger: ACTCAATAGGAAGGAATGTGACATCAGGAAGAGTCATTCCAGTGACATTAGTAAGACTTTATGGAGTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTTGTATGCTCTGATTaGCAATTGTCAGGCAAAATG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDFVCSD*QLSGKM
Trigger: CATTTTGCCTGACAATTGCAAATCAGAGCATACAAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTGAAATATTCATGGTaGCACCATATTAATGCCTCA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLKYSW*HHINAS
Trigger: TGAGGCATTAATATGGTGCAACCATGAATATTTCAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTACAGATTTAAGTGGTaGGATCTTATTACAGTTGGC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYRFKW*DLITVG
Trigger: GCCAACTGTAATAAGATCCAACCACTTAAATCTGTA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTAAAGTCGTGTAGCTaGGAACAAAATGTGCTGAAA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLKSCS*EQNVLK
Trigger: TTTCAGCACATTTTGTTCCAAGCTACACGACTTTAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTTTTGACTTCTTCCTaGTTAGACATGGGGATTATA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLLTSS*LDMGII
Trigger: TATAATCCCCATGTCTAACAAGGAAGAAGTCAAAAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTAAATGATATGGTCTaGGTTGATATTCTGAACCTG +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLNDMV*VDILNL
Trigger: CAGGTTCAGAATATCAACCAAGACCATATCATTTAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTATGGCTGCATAGTATaGAACAGACACTTCTCAAAA +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYGCIV*NRHFSK
Trigger: TTTTGAGAAGTGTCTGTTCAATACTATGCAGCCATA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGTGACTTTCTTTCATTaGGCAAAGTTTCCTTATCTC +
Preference number: 3 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDVTFFH*AKFPYL
Trigger: GAGATAAGGAAACTTTGCCAAATGAAAGAAAGTCAC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR TCA 72 bp CAAATTCTCAAATGGTTATTCATCCCCATTTGGCAATaGTTACTTACCAGTGACATACGTTCTATTGTTGCT +
Preference number: 3 (lower is better)
Translates to: QILKWLFIPIWQ*LLTSDIRSIVA
Trigger: AGCAACAATAGAACGTATGTCACTGGTAAGTAATCATTGCCAAATGGGGATGAATAACCATTTGAGAATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR GCA 72 bp CCATCTTTTACAGTGTGGTGTGTAAATGTACAGATCTaGATTCTAATTCAGTTCTGCAATGTATTAGCTGTT +
Preference number: 3 (lower is better)
Translates to: PSFTVWCVNVQI*ILIQFCNVLAV
Trigger: AACAGCTAATACATTGCAGAACTGAATTAGAATGCAGATCTGTACATTTACACACCACACTGTAAAAGATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR TCA 72 bp ATGGATGGGTGTCTAAGAAATGCTTATCACCCTGGATaGGATAAATACAGGAACAAAGGATTAATATTTAGA +
Preference number: 3 (lower is better)
Translates to: MDGCLRNAYHPG*DKYRNKGLIFR
Trigger: TCTAAATATTAATCCTTTGTTCCTGTATTTATCTCATCCAGGGTGATAAGCATTTCTTAGACACCCATCCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR TCA 72 bp ACTGATTTTAGAAGCTACATTCAGTGCCAAGTTGACTaGATGCGATTGTGGCTGTTTAATAACGTTTTTATT +
Preference number: 3 (lower is better)
Translates to: TDFRSYIQCQVD*MRLWLFNNVFI
Trigger: AATAAAAACGTTATTAAACAGCCACAATCGCATTCAGTCAACTTGGCACTGAATGTAGCTTCTAAAATCAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR GCA 72 bp AGAGATACAATCTATCCCTCAATAAATTGGACTCTCTaGTTTGTCCTAAAGAGAATTTCTCCGAAAGTATTA +
Preference number: 3 (lower is better)
Translates to: RDTIYPSINWTL*FVLKRISPKVL
Trigger: TAATACTTTCGGAGAAATTCTCTTTAGGACAAAGCAGAGAGTCCAATTTATTGAGGGATAGATTGTATCTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp GAACCCGTGAGCCCCATGAGGGCAGAGCCTCTGCATTaGGGTGTCCTGAACACCCAGCACAGTAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: EPVSPMRAEPLH*GVLNTQHSSRH
Trigger: GTGCCTGCTACTGTGCTGGGTGTTCAGGACACCCAAATGCAGAGGCTCTGCCCTCATGGGGCTCACGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCAGGCCCCAGTTGCCCTaGATGGCCACCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPRPQLP*MATLWL
Trigger: CAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCCCTCCCAGGCTCAGGTaGTTCTCCAGCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGPPRLR*FSSLSL
Trigger: AAGGCTGAGGCTGGAGAATCACCTGAGCCTGGGAGG...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCAGGGTTCTGGTTCCCTaGTCCAGGAGGAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGRVLVP*SRRSVP
Trigger: GGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGACGAAGGCCCCAGTTaGCCTGAATGGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGDEGPS*PEWPPF
Trigger: AAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCTCTCAGCGTCCAGGCTaGAGCGCCTCTCCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPSQRPG*SASPQV
Trigger: CACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAGA...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CAA 72 bp TGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTaGGCCAGCGAGGGACAGAGAAGAGACCACAACCAG +
Preference number: 4 (lower is better)
Translates to: WGSGRWVTCQYC*ASEGQRRDHNQ
Trigger: CTGGTTGTGGTCTCTTCTCTGTCCCTCGCTGGCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGCTGAGGCTGGGGTTTaGGTGTTCCGATTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPAEAGV*VFRLEP
Trigger: TGGCTCCAATCGGAACACTCAAACCCCAGCCTCAGC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCAAGAAGTGGAGGCCGTaGTGTAGGAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPKKWRP*CRRLGL
Trigger: CAGTCCCAGCCTCCTACACCACGGCCTCCACTTCTT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCAATAGCGTCCCTGGTTaGGGGCATACCCATACCCAG +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGNSVPG*GHTHTQ
Trigger: CTGGGTATGGGTATGCCCCCAACCAGGGACGCTATT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGGGTTTTGGCAGGGCTaGGAGGATAGTCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGGFWQG*EDSPAK
Trigger: TTTTGCAGGACTATCCTCTCAGCCCTGCCAAAACCC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGGCAGATGGGTGACATaGCAGTATTGCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPGRWVT*QYCLAS
Trigger: GCTGGCCAAGCAATACTGGCATGTCACCCATCTGCC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCTTTGAGTGTTCCGATTaGAGCCACAGGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGFECSD*SHRDGS
Trigger: GGACCCATCCCTGTGGCTCCAATCGGAACACTCAAA...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCCCAGTTGCCCTGAATaGCCACCCTTTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPPSCPE*PPFGCN
Trigger: ATTGCAGCCAAAGGGTGGCCATTCAGGGCAACTGGG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGGSWNG*LTQGSA
Trigger: GGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CAA 72 bp GAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATaGCTTGGCCAGCGAGGGACAGAGAAGAGACCACAA +
Preference number: 4 (lower is better)
Translates to: EMGLRQMGDMPV*LGQRGTEKRPQ
Trigger: TTGTGGTCTCTTCTCTGTCCCTCGCTGGCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp TTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCCATGCCTCCCCGTGTTaGAGGAGGTGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: FCLGQEIPHRESAKLKVFHASPC*RRWTLP
Trigger: GGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATG...GAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp GTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTAGGCCCCAGTTGCCCTaGATGGCCACCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLSWARDTTQGECKVEGLRPQLP*MATLWL
Trigger: CAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCT...AAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCTTCAGCCAACTGCAATaGAGGTGTCAGAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGFSQLQ*RCQSWQ
Trigger: TTGCCAGCTCTGACACCTTCATTGCAGTTGGCTGAA...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCCTTTAGCCGGACATTaGCAGCCTTCCCTAGATTGG +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPPLAGH*QPSLDW
Trigger: CCAATCTAGGGAAGGCTGTCAATGTCCGGCTAAAGG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTGGCCACCCTTTGGCTaGAATGGTGGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KFCLGQEIPHRESAKLKVWPPFG*NGGAQG
Trigger: CCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGCCA...GACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGGTGGTCTCCATCCGTaGAGGCACATGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFGGLHP*RHMAEG
Trigger: CCCCTCGGCCATGTGCCTGCACGGATGGAGACCACC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGTGGTCTCCATCCGTaGAGGCACATGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGGLHP*RHMAEG
Trigger: CCCCTCGGCCATGTGCCTGCACGGATGGAGACCACC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCGGGATGGGTCCAGCCTaGGGTGCAGGCTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: FCLGQEIPHRESAKLKVFGMGPA*GAGCGF
Trigger: GAAACCACAGCCTGCACCCCAGGCTGGACCCATCCC...GAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATCGTGGTGTAGGAGGCTaGGACTGGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNRGVGG*DWLRLG
Trigger: CCCCAGCCTCAGCCAGTCCCAGCCTCCTACACCACG...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACGTGGTGTAGGAGGCTaGGACTGGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRGVGG*DWLRLG
Trigger: CCCCAGCCTCAGCCAGTCCCAGCCTCCTACACCACG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCTCCGGCTGAAGTCCTaGTGGTGGAATGTAGGCATA +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPLRLKS*WWNVGI
Trigger: TATGCCTACATTCCACCACCAGGACTTCAGCCGGAG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCTTGTGTCCTGTGACTaGGGTCGAAACTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPLVSCD*GRNWRR
Trigger: TCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGCTGTTAGAGGGGGTTaGTTCGGGATGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPAVRGG*FGMTIL
Trigger: GAGAATGGTCATCCCGAACCAACCCCCTCTAACAGC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGTTGATATAGTGAGGTaGGAAATGGGGCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGVDIVR*EMGLRQ
Trigger: CTGCCTGAGCCCCATTTCCCACCTCACTATATCAAC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCATTAAAGGTAGGCCTTaGAGAAGTGGAGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPIKGRP*RSGGRG
Trigger: ACCACGGCCTCCACTTCTTCAAGGCCTACCTTTAAT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACATGCCTCCCCGTGTTaGAGGAGGTGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSHASPC*RRWTLP
Trigger: GGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCTGGGCTGACTTCACCTaGACATTAAAGGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGWADFT*TLKVGL
Trigger: AAGGCCTACCTTTAATGTGCAGGTGAAGTCAGCCCA...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGGGTCAGAGTCATTTCTaGCCCCATAGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSWARDTTQGECKVEGLQGQSHF*PHSLAL
Trigger: CAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACC...CTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGCCACCCTTTGGCTaGAATGGTGGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWPPFG*NGGAQG
Trigger: CCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCGGTGGTCTCCATCCGTaGAGGCACATGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAGGLHP*RHMAEG
Trigger: CCCCTCGGCCATGTGCCTGCACGGATGGAGACCACC...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATCCGTGCAGGCACATaGCCGAGGGGCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVIRAGT*PRGSPV
Trigger: CACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp CGCAGTACACATGTGGATTTGCCACCTGGCAGTCAATaGGTCTCTGAATTTCCCTGGATGACTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RSTHVDLPPGSQ*VSEFPWMTGGL
Trigger: CAAGCCCCCAGTCATCCAGGGAAATTCAGAGACCAATTGACTGCCAGGTGGCAAATCCACATGTGTACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCATACCCAGGCTCCGGCTaGAGTCCTGGTGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSYPGSG*SPGGGM
Trigger: CATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTA...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGACAGGAGAATGGCGTaGACCTGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFDRRMA*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCTGGCCACCCTTTGGCTaGAATGGTGGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAWPPFG*NGGAQG
Trigger: CCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGCCA...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGGCCACCCTTTGGCTaGAATGGTGGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAWPPFG*NGGAQG
Trigger: CCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGCCA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCGACGAAGGCCCCAGTTaGCCTGAATGGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: FCLGQEIPHRESAKLKVFDEGPS*PEWPPF
Trigger: AAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTC...GAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCACTGAGGACAGGTTATaGGTCCACAGAACCTCACAA +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPTEDRL*VHRTSQ
Trigger: TTGTGAGGTTCTGTGGACGCATAACCTGTCCTCAGT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATGTAGGAGGCTGGGACTaGCTGAGGCTGGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNVGGWD*LRLGFE
Trigger: CTCAAACCCCAGCCTCAGCCAGTCCCAGCCTCCTAC...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCCGTGGTGTAGGAGGCTaGGACTGGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFRGVGG*DWLRLG
Trigger: CCCCAGCCTCAGCCAGTCCCAGCCTCCTACACCACG...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCATCTGCCCCCATAGCCTaGCCCTGCTGCATAGTAGCC +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSSAPIA*PCCIVA
Trigger: GGCTACTATGCAGCAGGGCCAGGCTATGGGGGCAGA...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCTCAGCGTCCAGGCTaGAGCGCCTCTCCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSQRPG*SASPQV
Trigger: CACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCTTGCTACTTCTCACGTaGACACTTCACTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPLLLLT*TLHSSG
Trigger: ACCACTGGAGTGAAGTGTCCACGTGAGAAGTAGCAA...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCACAGAGCAGTTCTCATaGCATGTGATCTCAATGTGC +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGTEQFS*HVISMC
Trigger: GCACATTGAGATCACATGCCATGAGAACTGCTCTGT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTCCTGGCCCGGGGCTaGCATAATAGGCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLLARG*HNRLLA
Trigger: TGCAAGGAGCCTATTATGCCAGCCCCGGGCCAGGAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGCTGAGACAGGAGAATaGCGTGAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFAETGE*REPGRR
Trigger: CCGCCTCCCAGGTTCACGCCATTCTCCTGTCTCAGC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCTGAAACAGGATCTGTaGTATAGGTCTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPLKQDL*YRSSWD
Trigger: GTCCCAAGAAGACCTATATCACAGATCCTGTTTCAG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACGCCAGCATCCACAGTaGATGGGATCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARQHPQ*MGSHPG
Trigger: GCCTGGATGGGATCCCATTCACTGTGGATGCTGGCG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCCTCAATGCAGTGAATaGGCCCGCCAGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFPQCSE*ARQHPQ
Trigger: CTGTGGATGCTGGCGGGCTCATTCACTGCATTGAGG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGACATTTGGCCCCCTaGGCTTCCAATCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGHLAP*ASNPHS
Trigger: GCTGTGGGGATTGGAAGCTCAGGGGGCCAAATGTCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGGTCAGAGTCATTTCTaGCCCCATAGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSGQSHF*PHSLAL
Trigger: CAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGTCAGAGTCATTTCTaGCCCCATAGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGQSHF*PHSLAL
Trigger: CAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATAGGGTTCTGGTTCCCTaGTCCAGGAGGAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNRVLVP*SRRSVP
Trigger: GGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCT...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGACGAAGGCCCCAGTTaGCCTGAATGGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFDEGPS*PEWPPF
Trigger: AAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGCGAGGGGCTCACCAGTaGTTTTGGGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWRGAHQ*FWVAAK
Trigger: CTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCG...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACGAGGGGCTCACCAGTaGTTTTGGGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARGAHQ*FWVAAK
Trigger: CTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGGGCTCAGATTCAAGTaGCACCAATTCTTTACCAAA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGGLRFK*HQFFTK
Trigger: TTTGGTAAAGAATTGGTGGCACTTGAATCTGAGCCC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCTGGGTGTCTAAGAAATaGTTATCACCCTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGWVSKK*LSPWMR
Trigger: TCTCATCCAGGGTGATAAGCATTTCTTAGACACCCA...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCTTGTCCTTAAAGCAGTaGCACTCAAAAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGLSLKQ*HSKSGP
Trigger: TGGACCACTTTTTGAGTGGCACTGCTTTAAGGACAA...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGGAAGTGCTTGGCAATaGTATTTGCAGTCCAGAATA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGGSAWQ*YLQSRI
Trigger: TATTCTGGACTGCAAATAGCATTGCCAAGCACTTCC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGGTAGGAGGCTGGGACTaGCTGAGGCTGGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWVGGWD*LRLGFE
Trigger: CTCAAACCCCAGCCTCAGCCAGTCCCAGCCTCCTAC...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTAGGAGGCTGGGACTaGCTGAGGCTGGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVGGWD*LRLGFE
Trigger: CTCAAACCCCAGCCTCAGCCAGTCCCAGCCTCCTAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAGAAGTGGAGGCCGTaGTGTAGGAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKKWRP*CRRLGL
Trigger: CAGTCCCAGCCTCCTACACCACGGCCTCCACTTCTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTTGAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAATCTGCCCCCATAGCCTaGCCCTGCTGCATAGTAGCC +
Preference number: 4 (lower is better)
Translates to: FEVLSWARDTTQGECKVESAPIA*PCCIVA
Trigger: GGCTACTATGCAGCAGGGCCAGGCTATGGGGGCAGA...TTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCATCCGTGCAGGCACATaGCCGAGGGGCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFIRAGT*PRGSPV
Trigger: CACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGAT...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAACCAGTGGAGCTCTGTaGAGGCCGAGGCTTATAGGG +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSTSGAL*RPRLIG
Trigger: CCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTCCTGGCCCGGGGCTaGCATAATAGGCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALLARG*HNRLLA
Trigger: TGCAAGGAGCCTATTATGCCAGCCCCGGGCCAGGAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACGGACAGTCTCCTCCTaGCCCGGGGCTGGCATAATA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARTVSS*PGAGII
Trigger: TATTATGCCAGCCCCGGGCCAGGAGGAGACTGTCCG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATAGGGCTGGGCTGGGCTaGCTTCACCTGCACATTAAA +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNRAGLG*LHLHIK
Trigger: TTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCT...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp TTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCTCTTCTTGGGACCAGTaGCTGGATACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FCLGQEIPHRESAKLKVFSSWDQ*LDTSQE
Trigger: CTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGA...GAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp GAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTTGGCGCACAGGGGGCTaGAACAGGATCTGTGATATA +
Preference number: 4 (lower is better)
Translates to: EVLSWARDTTQGECKVEGWRTGG*NRICDI
Trigger: TATATCACAGATCCTGTTTCAGCCCCCTGTGCGCCA...ACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGGCCCCAGTTGCCCTaGATGGCCACCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRPQLP*MATLWL
Trigger: CAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAAGCTACTCGGGAGGCTaGGGCAGGAGAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSSYSGG*GRRIAQ
Trigger: TTGAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCATCCCCATTTGGCAATaGTTACTTACCAGTGACATA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGIPIWQ*LLTSDI
Trigger: TATGTCACTGGTAAGTAATCATTGCCAAATGGGGAT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCAGGAGATCTACAGCATaGAAGCACTTAATTACCTTC +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGRRSTA*KHLITF
Trigger: GAAGGTAATTAAGTGCTTTCATGCTGTAGATCTCCT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCCACGTGGAAGACCTaGTCCATGGCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSTWKT*SMAVHP
Trigger: AGGATGCACTGCCATGGATCAGGTCTTCCACGTGGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGGCGGTCAACACCCTaGTGCGGGCAGAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSWRSTP*CGQSCR
Trigger: CCTGCAACTCTGCCCGCATCAGGGTGTTGACCGCCA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGGCGGAGCTTGCAGTaGGAGGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARRSLQ*EEIVPL
Trigger: CAATGGCACGATCTCCTCTCACTGCAAGCTCCGCCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGGTGTTCTCAGCTGTaGGCGTGGCTACTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFRCSQL*AWLLGD
Trigger: GTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACGAAGGAGGTGGACACTaGCCAGAGACAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: EIPHRESAKLKVFSKNLDEGGGH*PETGTG
Trigger: GCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTC...GTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGTGACATGCCAGTATTaGTTGGCCAGCGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSVTCQY*LASEGQ
Trigger: CTGTCCCTCGCTGGCCAAGCAATACTGGCATGTCAC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGTGAGAGGAGATCGTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSERRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCACGATCTCCTCTCACT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCAGTGGCGCAATCTCTaGTCACTGCAACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFQWRNL*SLQPLP
Trigger: AGGCAGAGGTTGCAGTGAGCAGAGATTGCGCCACTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTTTTGAGTGTTCCGATTaGAGCCACAGGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: EVLSWARDTTQGECKVEGFECSD*SHRDGS
Trigger: GGACCCATCCCTGTGGCTCCAATCGGAACACTCAAA...ACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATAATAGCGTCCCTGGTTaGGGGCATACCCATACCCAG +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNNSVPG*GHTHTQ
Trigger: CTGGGTATGGGTATGCCCCCAACCAGGGACGCTATT...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAATAGCGTCCCTGGTTaGGGGCATACCCATACCCAG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVNSVPG*GHTHTQ
Trigger: CTGGGTATGGGTATGCCCCCAACCAGGGACGCTATT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAATAGCGTCCCTGGTTaGGGGCATACCCATACCCAG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFNSVPG*GHTHTQ
Trigger: CTGGGTATGGGTATGCCCCCAACCAGGGACGCTATT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATCCCAGGAGGGTTCTaGTTCCCTGCTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAIPGGF*FPAPGG
Trigger: TCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACCCAGTTGCCCTGAATaGCCACCCTTTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVPSCPE*PPFGCN
Trigger: ATTGCAGCCAAAGGGTGGCCATTCAGGGCAACTGGG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGTATTCGTCAGCAGGTaGATTTTCCATGTCATACAG +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPVFVSR*IFHVIQ
Trigger: CTGTATGACATGGAAAATCCACCTGCTGACGAATAC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGGGTTCCCAAAGGAATaGGTGGTCTCCATCCGTGCA +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSGFPKE*VVSIRA
Trigger: TGCACGGATGGAGACCACCCATTCCTTTGGGAACCC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGGTTCCCAAAGGAATaGGTGGTCTCCATCCGTGCA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGFPKE*VVSIRA
Trigger: TGCACGGATGGAGACCACCCATTCCTTTGGGAACCC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCTCCAGGTTGTTTGTATaGGTTGTACTTAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGSRLFV*VVLRFW
Trigger: CCAAAACCTAAGTACAACCCATACAAACAACCTGGA...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACCAGTGGAGCTCTGTaGAGGCCGAGGCTTATAGGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRATSGAL*RPRLIG
Trigger: CCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCAGGCTGTTGAACCAGTaGAGCTCTGTGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSARLLNQ*SSVEAE
Trigger: CTCGGCCTCCACAGAGCTCCACTGGTTCAACAGCCT...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCAAATGTGAAAGGCACTaGTTTAAAGGGCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGKCERH*FKGLRF
Trigger: GAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGCATCCACAGTGAATaGGATCCCATCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSIHSE*DPIQAA
Trigger: CGCAGCCTGGATGGGATCCCATTCACTGTGGATGCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGCATCCACAGTGAATaGGATCCCATCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSIHSE*DPIQAA
Trigger: CGCAGCCTGGATGGGATCCCATTCACTGTGGATGCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATTAGCTGGGCGCGGTaGCGGGCGTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSISWAR*RASVVP
Trigger: TGGGACTACAGACGCCCGCCACCGCGCCCAGCTAAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp ATGACTGGGGGCTTGGTAGTCTGTAAGAAGTCGATATaGTCCTCTAAGGTGTTCTCAGCTGTGAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: MTGGLVVCKKSI*SSKVFSAVSVA
Trigger: AGCCACGCTCACAGCTGAGAACACCTTAGAGGACAATATCGACTTCTTACAGACTACCAAGCCCCCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGAGGGCTGGGCTGGGCTaGCTTCACCTGCACATTAAA +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWRAGLG*LHLHIK
Trigger: TTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCT...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGGGCTGGGCTGGGCTaGCTTCACCTGCACATTAAA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARAGLG*LHLHIK
Trigger: TTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCATACCCAGGCTCCGGCTaGAGTCCTGGTGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: SAKLKVFSKNLDCKHSLAYPGSG*SPGGGM
Trigger: CATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTA...TGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTACCCAGGCTCCGGCTaGAGTCCTGGTGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYPGSG*SPGGGM
Trigger: CATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGCGCACAGGGGGCTaGAACAGGATCTGTGATATA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWRTGG*NRICDI
Trigger: TATATCACAGATCCTGTTTCAGCCCCCTGTGCGCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGGGGGTTGGTTCGGGATaGCCATTCTCTTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWGVGSG*PFSCVL
Trigger: CAGGACACAAGAGAATGGTCATCCCGAACCAACCCC...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGGGTTGGTTCGGGATaGCCATTCTCTTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGVGSG*PFSCVL
Trigger: CAGGACACAAGAGAATGGTCATCCCGAACCAACCCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCACAACCACAGCTCACTaGGCCACAGCTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFTTTAH*ATAHCS
Trigger: GCTGCAGTGAGCTGTGGCTCAGTGAGCTGTGGTTGT...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCCACGTGGAAGACCTaGTCCATGGCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRASTWKT*SMAVHP
Trigger: AGGATGCACTGCCATGGATCAGGTCTTCCACGTGGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGCACATCACGCAGGTaGAACAGTGAGGATGATAGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGTSRR*NSEDDR
Trigger: CCTATCATCCTCACTGTTTCACCTGCGTGATGTGCC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAGTCCTCAATGCAGTaGATGAGCCCGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKSSMQ*MSPPAS
Trigger: GGATGCTGGCGGGCTCATTCACTGCATTGAGGACTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACAAGCAGTATTCTGCTaGCGATGCCACAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAQAVFC*RCHRDG
Trigger: CCCATCCCTGTGGCATCGTCAGCAGAATACTGCTTG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGATCTCCTGACCTCGTaGTCGGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYDLLTS*SARLGL
Trigger: GAGGCCAAGGCGGGCCGATCACGAGGTCAGGAGATC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGATCTCTTGACCTCATaGTCCGCTCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSDLLTS*SARLGL
Trigger: GAGGCCGAGGCGAGCGGATCATGAGGTCAAGAGATC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTCCTGCCCAGGAGACTaGTGGCAGTTTCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSCPGD*WQFLLT
Trigger: TGTAAGCAGAAACTGCCATCAGTCTCCTGGGCAGGA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTCACGGTAGCCGCTTaGGAGGGGATATTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFFTVAA*EGILEV
Trigger: CACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGAAGGAGGTGGACACTaGCCAGAGACAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFEGGGH*PETGTG
Trigger: GCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACCCATAGCCTGGCCCTaGTGCATAGTAGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSPIAWP*CIVAFI
Trigger: TATGAAGGCTACTATGCAGCAGGGCCAGGCTATGGG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCCCATAGCCTGGCCCTaGTGCATAGTAGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFPIAWP*CIVAFI
Trigger: TATGAAGGCTACTATGCAGCAGGGCCAGGCTATGGG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCTTATAGGGGGAGCTaGACTCAAGGTCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVAYRGS*TQGQPR
Trigger: TCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCTTAGCTAAGCTAAACTaGCACCCCAACACAAATAAA +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGLAKLN*HPNTNK
Trigger: TTTATTTGTGTTGGGGTGGCAGTTTAGCTTAGCTAA...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCCTGATCCATGGCAGTaGATCCTGTACCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFPDPWQ*ILYLPQ
Trigger: TTGGGGAAGGTACAGGATGCACTGCCATGGATCAGG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGATCCCATCCAGGCTaGGGTGGCACATCACGCAGG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGSHPG*GGTSRR
Trigger: CCTGCGTGATGTGCCACCGCAGCCTGGATGGGATCC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGTGAGAGGAGATCGTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRASERRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCACGATCTCCTCTCACT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTTGAGTGTTCCGATTaGAGCCACAGGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFFECSD*SHRDGS
Trigger: GGACCCATCCCTGTGGCTCCAATCGGAACACTCAAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCGTGGTGTAGGAGGCTaGGACTGGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRGVGG*DWLRLG
Trigger: CCCCAGCCTCAGCCAGTCCCAGCCTCCTACACCACG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATCTCCGGCTGAAGTCCTaGTGGTGGAATGTAGGCATA +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNLRLKS*WWNVGI
Trigger: TATGCCTACATTCCACCACCAGGACTTCAGCCGGAG...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCTGCCCCCATAGCCTaGCCCTGCTGCATAGTAGCC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSAPIA*PCCIVA
Trigger: GGCTACTATGCAGCAGGGCCAGGCTATGGGGGCAGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTAGGAGGAGTGTACCCTaGTTCCCGTTTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: EVLSWARDTTQGECKVEGRRSVP*FPFPGI
Trigger: AATACCTGGAAACGGGAACCAGGGTACACTCCTCCT...ACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCATCCCAGGAGGGTTCTaGTTCCCTGCTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFIPGGF*FPAPGG
Trigger: TCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGAT...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACCCCAGTTGCCCTGAATaGCCACCCTTTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: EIPHRESAKLKVFSKNLDPSCPE*PPFGCN
Trigger: ATTGCAGCCAAAGGGTGGCCATTCAGGGCAACTGGG...GTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFTSAFG*QPRWVR
Trigger: TCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCTGTTAGAGGGGGTTaGTTCGGGATGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVAVRGG*FGMTIL
Trigger: GAGAATGGTCATCCCGAACCAACCCCCTCTAACAGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCTGGGGCTCAGGCAGATaGGTGACATGCCAGTATTGC +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAWGSGR*VTCQYC
Trigger: GCAATACTGGCATGTCACCCATCTGCCTGAGCCCCA...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCCCATCTTTTACAGTGTaGTGTGTAAATGTACAGATC +
Preference number: 4 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGPSFTV*CVNVQI
Trigger: GATCTGTACATTTACACACCACACTGTAAAAGATGG...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGACACTTCACTCCAGTaGTTTTATTCCCTGTTATGT +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPDTSLQ*FYSLLC
Trigger: ACATAACAGGGAATAAAACCACTGGAGTGAAGTGTC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCTGAGGCAGGAGAATaGCGTGAACCCGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAEAGE*REPEKR
Trigger: CCGCTTCTCGGGTTCACGCCATTCTCCTGCCTCAGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCCGGAGTCGGCAAATaGCTATATTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAAGVGK*LYSELG
Trigger: CCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp GCTAGAAGGATGGCATGGTCCCATGTTAGTTTCAATTaGCTGCCTACAGAGGGAGGACCAAGGCACTTTAAC +
Preference number: 4 (lower is better)
Translates to: ARRMAWSHVSFN*LPTEGGPRHFN
Trigger: GTTAAAGTGCCTTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATGGGACCATGCCATCCTTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCATGCCTCCCCGTGTTaGAGGAGGTGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYHASPC*RRWTLP
Trigger: GGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCTCTTCTTGGGACCAGTaGCTGGATACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSASSWDQ*LDTSQE
Trigger: CTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGA...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCTTCTTGGGACCAGTaGCTGGATACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRASSWDQ*LDTSQE
Trigger: CTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCTGGCGCACAGGGGGCTaGAACAGGATCTGTGATATA +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAWRTGG*NRICDI
Trigger: TATATCACAGATCCTGTTTCAGCCCCCTGTGCGCCA...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGGCGCACAGGGGGCTaGAACAGGATCTGTGATATA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAWRTGG*NRICDI
Trigger: TATATCACAGATCCTGTTTCAGCCCCCTGTGCGCCA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGGCCCCAGTTGCCCTaGATGGCCACCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRPQLP*MATLWL
Trigger: CAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTCTCTTGTGTCCTGTaGCTGGGGTCGAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAFSCVL*LGSKLE
Trigger: CTCCAGTTTCGACCCCAGTCACAGGACACAAGAGAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCAGGTGGAGGTTGCAGTaGGCCAAGATCACGCCAGTA +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFRWRLQ*AKITPV
Trigger: TACTGGCGTGATCTTGGCTCACTGCAACCTCCACCT...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCACACTTGGTGAACATTaGTTAAGTCACTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPTLGEH*LSHLSL
Trigger: AAGTGACAAGTGACTTAATCAATGTTCACCAAGTGT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGAGAATCCGCTCCATaGTGGGCTTGGAACACACAT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGESAP*WAWNTH
Trigger: ATGTGTGTTCCAAGCCCATCATGGAGCGGATTCTCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGCACATCACGCAGGTaGAACAGTGAGGATGATAGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGTSRR*NSEDDR
Trigger: CCTATCATCCTCACTGTTTCACCTGCGTGATGTGCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTGGCGGTCAACACCCTaGTGCGGGCAGAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYWRSTP*CGQSCR
Trigger: CCTGCAACTCTGCCCGCATCAGGGTGTTGACCGCCA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGCCGGCTGAACAGGTaGCTGAATCTAAAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVCRLNR*LNLKVS
Trigger: ACTGACCTTTAGATTCAGTCACCTGTTCAGCCGGCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCAGCCGACACAGATTTaGCAAGAGAAGCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFQPTQI*QEKPKP
Trigger: TGGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGACAGGAGAATGGCGTaGACCTGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKDRRMA*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGTC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATGGTCTCGATCTCCTaGCCTCGTGATCGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDMVSIS*PRDRPA
Trigger: GGCGGGCCGATCACGAGGTCAGGAGATCGAGACCAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGATCTCTTGACCTCATaGTCCGCTCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKDLLTS*SARLGL
Trigger: GAGGCCGAGGCGAGCGGATCATGAGGTCAAGAGATC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAAGGTACAGCTTCCTaGGGGACGCAGCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKGTAS*GTQLKR
Trigger: TCTCTTGAGCTGCGTCCCTCAGGAAGCTGTACCTTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTCACGGTAGCCGCTTaGGAGGGGATATTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAFTVAA*EGILEV
Trigger: CACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGACATTTGGCCCCCTaGGCTTCCAATCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGHLAP*ASNPHS
Trigger: GCTGTGGGGATTGGAAGCTCAGGGGGCCAAATGTCC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAAAGAGAATGGTGGCTaGCTGCAATGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFKENGG*LQWHGV
Trigger: GACTCCATGCCATTGCAGTCAGCCACCATTCTCTTT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATCACGGTGGGGCTATaGTTGTGCTTAGCTAGTAGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVITVGL*LCLASR
Trigger: CCTACTAGCTAAGCACAATCATAGCCCCACCGTGAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTGTAGGCATAATCCATaGCTCCCCGTGTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNCRHNP*LPVLKE
Trigger: CTCCTTCAACACGGGGAGGCATGGATTATGCCTACA...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGTAGGCATAATCCATaGCTCCCCGTGTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVCRHNP*LPVLKE
Trigger: CTCCTTCAACACGGGGAGGCATGGATTATGCCTACA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACCCCATAGCCTGGCCCTaGTGCATAGTAGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: EIPHRESAKLKVFSKNLDPIAWP*CIVAFI
Trigger: TATGAAGGCTACTATGCAGCAGGGCCAGGCTATGGG...GTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGGGTTCTGGTTCCCTaGTCCAGGAGGAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRVLVP*SRRSVP
Trigger: GGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCTCCTCAAGTGTCTTaGCTCCGGGATTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRASPQVS*LRDSPV
Trigger: TACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGGCTTATAGGGGGAGCTaGACTCAAGGTCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWAYRGS*TQGQPR
Trigger: TCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGC...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTTGTCCAGGCTGGAGTaGAGTGGCACAACCACAGCT +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFLSRLE*SGTTTA
Trigger: AGCTGTGGTTGTGCCACTGCACTCCAGCCTGGACAA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCTTTTCACTAGTCCTTTaGCTCTTGATTTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPFSLVL*LLISSC
Trigger: GCAAGATGAAATCAAGAGGCAAAGGACTAGTGAAAA...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGATCCCATCCAGGCTaGGGTGGCACATCACGCAGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGSHPG*GGTSRR
Trigger: CCTGCGTGATGTGCCACCGCAGCCTGGATGGGATCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGAATCTAAAGGTCAGTaGTCGCCTTGGCGGTCAACA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFESKGQ*SPWRST
Trigger: TGTTGACCGCCAAGGCGAGCACTGACCTTTAGATTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAGTTCATGGAGGGCTaGTTCCTGTCCATACTGTGC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKFMEG*FLSILC
Trigger: GCACAGTATGGACAGGAAGCAGCCCTCCATGAACTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCGGCTCTATCGGAAATaGCTGTTGCAGCAACATGCA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFRLYRK*LLQQHA
Trigger: TGCATGTTGCTGCAACAGGCATTTCCGATAGAGCCG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTCAGAGCAAAGCCATaGTGTGTTTCTTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLRAKP*CVSSQS
Trigger: GGACTGGGAAGAAACACAGCATGGCTTTGCTCTGAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGTAGGAGGCTGGGACTaGCTGAGGCTGGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKVGGWD*LRLGFE
Trigger: CTCAAACCCCAGCCTCAGCCAGTCCCAGCCTCCTAC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCAAAGAAGTGGAGGCCGTaGTGTAGGAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: SAKLKVFSKNLDCKHSLAKKWRP*CRRLGL
Trigger: CAGTCCCAGCCTCCTACACCACGGCCTCCACTTCTT...TGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCCCAGAGACAGGAACTaGCTGAGTGTTATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAPRDRN*LSVIAL
Trigger: CAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCTGAAGTCCTGGTGGTaGAATGTAGGCATAATCCAT +
Preference number: 4 (lower is better)
Translates to: LSWARDTTQGECKVEGLQLKSWW*NVGIIH
Trigger: ATGGATTATGCCTACATTCCACCACCAGGACTTCAG...CTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAAGGAGGAGTGTACCCTaGTTCCCGTTTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSRRSVP*FPFPGI
Trigger: AATACCTGGAAACGGGAACCAGGGTACACTCCTCCT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGGAGGAGTGTACCCTaGTTCCCGTTTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFRRSVP*FPFPGI
Trigger: AATACCTGGAAACGGGAACCAGGGTACACTCCTCCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCAATCCCAGGAGGGTTCTaGTTCCCTGCTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SAKLKVFSKNLDCKHSLAIPGGF*FPAPGG
Trigger: TCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGAT...TGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSGWQPR*VRHCWN
Trigger: ATTCCAACAATGTCTCACCCATCTTGGCTGCCACCC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWTSAFG*QPRWVR
Trigger: TCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGT...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGCTCACCAGTGCTTTTaGGTGGCAGCCAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFAHQCF*VAAKMG
Trigger: ACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATCCGTGCAGGCACATaGCCGAGGGGCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDIRAGT*PRGSPV
Trigger: CACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTCCCAAAGGAATGGGTaGTCTCCATCCGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFSQRNG*SPSVQA
Trigger: TGCCTGCACGGATGGAGACCACCCATTCCTTTGGGA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGGTCAGCCAAGATGCTaGTCAAGGAGTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFGQPRC*SRSQSQ
Trigger: CTGAGATTGACTCCTTGACCAGCATCTTGGCTGACC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGGCTGTTGAACCAGTaGAGCTCTGTGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRLLNQ*SSVEAE
Trigger: CTCGGCCTCCACAGAGCTCCACTGGTTCAACAGCCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAAGCTGGCTCCTGGAATaGATGGTTGACACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSSWLLE*MVDTRF
Trigger: GAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCTGTTAGAGGGGGTTaGTTCGGGATGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAAVRGG*FGMTIL
Trigger: GAGAATGGTCATCCCGAACCAACCCCCTCTAACAGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGAAAACTAGCCAGGTGTaGCGGTGGGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWKTSQV*RWAPVI
Trigger: GATTACAGGTGCCCACCGCCACACCTGGCTAGTTTT...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCAGATTGGGAGGAAAATaGTCTTCTACCACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPRLGGK*SSTTEN
Trigger: ATTTTCTGTGGTAGAAGACCATTTTCCTCCCAATCT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGAAGACCTGATCCATaGCAGTGCATCCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGRPDP*QCILYL
Trigger: AAGGTACAGGATGCACTGCCATGGATCAGGTCTTCC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTCCACAGCATAGAATaGCTGCCCTCGGAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFFHSIE*LPSELV
Trigger: AACAAGCTCCGAGGGCAGCCATTCTATGCTGTGGAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGCTGAGACAGGAGAATaGCGTGAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKAETGE*REPGRR
Trigger: CCGCCTCCCAGGTTCACGCCATTCTCCTGTCTCAGC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGCTGAGGCAGGAGAATaGCGTGAACCCGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKAEAGE*REPEKR
Trigger: CCGCTTCTCGGGTTCACGCCATTCTCCTGCCTCAGC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATATTAGCTGGGCGCGGTaGCGGGCGTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYISWAR*RASVVP
Trigger: TGGGACTACAGACGCCCGCCACCGCGCCCAGCTAAT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGTCTCTGAATTTCCCTaGATGACTGGGGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFVSEFP*MTGGLV
Trigger: TACCAAGCCCCCAGTCATCCAGGGAAATTCAGAGAC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGTGGAACGTACATCGTaGTTCATGGGAGAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFVERTS*FMGERL
Trigger: AAGCCTCTCTCCCATGAACCACGATGTACGTTCCAC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAATGCTCTAAGGATCTaGCAAGGACATTTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVNALRI*QGHLAP
Trigger: GGGGGCCAAATGTCCTTGCCAGATCCTTAGAGCATT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCATTAGCTGAGGCTGGGGTTTaGGTGTTCCGATTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: AKLKVFSKNLDCKHSLALAEAGV*VFRLEP
Trigger: TGGCTCCAATCGGAACACTCAAACCCCAGCCTCAGC...TAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTACCCAGGCTCCGGCTaGAGTCCTGGTGGTGGAATG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYYPGSG*SPGGGM
Trigger: CATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGGGGAGAGTGCAAAGTTaGAGGTCTTCAGCAAAAATT +
Preference number: 4 (lower is better)
Translates to: LSWARDTTQGECKVEGLQGRVQS*RSSAKI
Trigger: AATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCC...CTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGGCAGCCAAGATGGGTaGGACATTGTTGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFGSQDG*DIVGIN
Trigger: ATTGATTCCAACAATGTCTCACCCATCTTGGCTGCC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGGGCAGCCAAGATGGGTaGGACATTGTTGGAATCTCA +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWGSQDG*DIVGIS
Trigger: TGAGATTCCAACAATGTCTCACCCATCTTGGCTGCC...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTTCTCTTGTGTCCTGTaGCTGGGGTCGAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFFSCVL*LGSKLE
Trigger: CTCCAGTTTCGACCCCAGTCACAGGACACAAGAGAA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTTCTGCTCTGTCTCTaGGCCTCAAAGTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALLLCL*ASKFPL
Trigger: AAGTGGGAACTTTGAGGCTCAGAGACAGAGCAGAAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCGCCAGCATCCACAGTaGATGGGATCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRQHPQ*MGSHPG
Trigger: GCCTGGATGGGATCCCATTCACTGTGGATGCTGGCG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACCTCAATGCAGTGAATaGGCCCGCCAGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKPQCSE*ARQHPQ
Trigger: CTGTGGATGCTGGCGGGCTCATTCACTGCATTGAGG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCAAGCAGTATTCTGCTaGCGATGCCACAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSQAVFC*RCHRDG
Trigger: CCCATCCCTGTGGCATCGTCAGCAGAATACTGCTTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACAGCATCTAACAACCTaGTGCCTTATGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAQHLTT*CLMLGH
Trigger: GTGTCCCAGCATAAGGCATCAGGTTGTTAGATGCTG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAGAACCCACATCTTTaGGCTGCAGAGATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKNPHL*AAEMPA
Trigger: TGCTGGCATCTCTGCAGCTCAAAGATGTGGGTTCTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCCCAAGAAATGGACTTaGGGCACATTTTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFPKKWT*GTFCRG
Trigger: ACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGGCGGAGCTTGCAGTaGGAGGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRRSLQ*EEIVPL
Trigger: CAATGGCACGATCTCCTCTCACTGCAAGCTCCGCCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACAGTCAATTGGTCTCTaGATTTCCCTGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVQSIGL*ISLDDW
Trigger: CCAGTCATCCAGGGAAATTCAGAGACCAATTGACTG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAAGAGAATGGTGGCTaGCTGCAATGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKENGG*LQWHGV
Trigger: GACTCCATGCCATTGCAGTCAGCCACCATTCTCTTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATCACGGTGGGGCTATaGTTGTGCTTAGCTAGTAGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAITVGL*LCLASR
Trigger: CCTACTAGCTAAGCACAATCATAGCCCCACCGTGAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGGCTGACTTCACCTaGACATTAAAGGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWADFT*TLKVGL
Trigger: AAGGCCTACCTTTAATGTGCAGGTGAAGTCAGCCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCTGTAGGCATAATCCATaGCTCCCCGTGTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSACRHNP*LPVLKE
Trigger: CTCCTTCAACACGGGGAGGCATGGATTATGCCTACA...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGTAGGCATAATCCATaGCTCCCCGTGTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRACRHNP*LPVLKE
Trigger: CTCCTTCAACACGGGGAGGCATGGATTATGCCTACA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCGAGGGGCTCACCAGTaGTTTTGGGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRGAHQ*FWVAAK
Trigger: CTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTCTCCTCAAGTGTCTTaGCTCCGGGATTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFSPQVS*LRDSPV
Trigger: TACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACAAGGTCAGCCAAGATaGTGGTCAAGGAGTCAATCT +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSQGQPR*WSRSQS
Trigger: AGATTGACTCCTTGACCAGCATCTTGGCTGACCTTG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCTGAGGCAGGAGAATTaGTCAAAATCCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSALRQEN*SKSGGG
Trigger: TCCACCTCCGGATTTTGAGCAATTCTCCTGCCTCAG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGTAAATGTACAGATCTaGATTCTAATTCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPVNVQI*ILIQFC
Trigger: GCAGAACTGAATTAGAATGCAGATCTGTACATTTAC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAGGTCTCACTATGTTaGCCAGGCTGGTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKVSLC*PGWCQT
Trigger: AGTTTGACACCAGCCTGGGCAACATAGTGAGACCTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTGGGAGGCGGAGCTTaGAGTGAGAGGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLGGGA*SERRSC
Trigger: GCACGATCTCCTCTCACTGCAAGCTCCGCCTCCCAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTCGGCCTCCCAAAGTaGTGGATTACAGGCACGAGC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLGLPK*WITGTS
Trigger: GCTCGTGCCTGTAATCCAGCACTTTGGGAGGCCGAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGTATACATGTGCCATaGTGGTGTGCTGCACCCATT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVCIHVP*WCAAPI
Trigger: AATGGGTGCAGCACACCAGCATGGCACATGTATACA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCATCACTCTAGGCTATaGTGCTGCTCCATCAACAGT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFHHSRL*CCSINS
Trigger: ACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGATG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGAATGGTGGCTGACTaGAATGGCATGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARMVAD*NGMESI
Trigger: GATGGACTCCATGCCATTGCAGTCAGCCACCATTCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATCTGGGGTGCAGGCTGTaGTTTCAATGTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNLGCRL*FQCRLL
Trigger: AAGAAGTCTACATTGAAACCACAGCCTGCACCCCAG...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCTGGGGTGCAGGCTGTaGTTTCAATGTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLGCRL*FQCRLL
Trigger: AAGAAGTCTACATTGAAACCACAGCCTGCACCCCAG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTGGGGTGCAGGCTGTaGTTTCAATGTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLGCRL*FQCRLL
Trigger: AAGAAGTCTACATTGAAACCACAGCCTGCACCCCAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAAGAAGTGGAGGCCGTaGTGTAGGAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKKKWRP*CRRLGL
Trigger: CAGTCCCAGCCTCCTACACCACGGCCTCCACTTCTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTCTGCCCCCATAGCCTaGCCCTGCTGCATAGTAGCC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYSAPIA*PCCIVA
Trigger: GGCTACTATGCAGCAGGGCCAGGCTATGGGGGCAGA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCCGTTTCCAGGTATTTaGGTGACCTTGTTGACCATA +
Preference number: 4 (lower is better)
Translates to: VLSWARDTTQGECKVEGLPFPGI*VTLLTI
Trigger: TATGGTCAACAAGGTCACCCAAATACCTGGAAACGG...AAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATCCCAGGAGGGTTCTaGTTCCCTGCTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIPGGF*FPAPGG
Trigger: TCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCTCACCAGTGCTTTTaGGTGGCAGCCAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAHQCF*VAAKMG
Trigger: ACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTCTTCATCAAGAGGTaGTGGAGGAGGAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLFIKR*WRRKVS
Trigger: GGAAACTTTCCTCCTCCACCACCTCTTGATGAAGAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGGGTCAGCCAAGATGCTaGTCAAGGAGTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWGQPRC*SRSQSQ
Trigger: CTGAGATTGACTCCTTGACCAGCATCTTGGCTGACC...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCGGACAGTCTCCTCCTaGCCCGGGGCTGGCATAATA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRTVSS*PGAGII
Trigger: TATTATGCCAGCCCCGGGCCAGGAGGAGACTGTCCG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTGGTTTCCCACAGATaGCTAAAGCAGGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALVSHR*LKQGYG
Trigger: TCCATACCCCTGCTTTAGCCATCTGTGGGAAACCAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCACCTGGCAGTCAATTaGTCTCTGAATTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFHLAVN*SLNFPG
Trigger: TCCAGGGAAATTCAGAGACCAATTGACTGCCAGGTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAAGGATCAGCTTTCTTaGAAGGGGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFKDQLS*KGCVCV
Trigger: CACACACACACACCCCTTCCAAGAAAGCTGATCCTT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCCGGAGTCGGCAAATaGCTATATTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAGVGK*LYSELG
Trigger: CCCCAGCTCTGAATATAGCCATTTGCCGACTCCGGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAATGCTCTAAGGATCTaGCAAGGACATTTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRANALRI*QGHLAP
Trigger: GGGGGCCAAATGTCCTTGCCAGATCCTTAGAGCATT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTCGTCCTATTTACATaGACCCTCTCCTATTGCCAC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLVLFT*TLSYCH
Trigger: GTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCTCGTCCTATTTACATaGACCCTCTCCTATTGCCAC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLVLFT*TLSYCH
Trigger: GTGGCAATAGGAGAGGGTCCATGTAAATAGGACGAG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp GTCCCAAGGAATAAGCAGGTGGATGATGATACTGGCTaGATGGATGATAACACTCCAGGGAGGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: VPRNKQVDDDTG*MDDNTPGREMH
Trigger: ATGCATTTCCCTCCCTGGAGTGTTATCATCCATCAAGCCAGTATCATCATCCACCTGCTTATTCCTTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp CTTATCTCAGCACCTACTCTTTCTGATGGTATGTTTTaGAAGGCTGCACAGTACGACTCTGGGTACCGTGTG +
Preference number: 4 (lower is better)
Translates to: LISAPTLSDGMF*KAAQYDSGYRV
Trigger: CACACGGTACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATACCATCAGAAAGAGTAGGTGCTGAGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGCTGAGGCTGGGGTTTaGGTGTTCCGATTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYAEAGV*VFRLEP
Trigger: TGGCTCCAATCGGAACACTCAAACCCCAGCCTCAGC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCTGTTGTGTAGACACTaGAATGCTGGGGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSALLCRH*NAGVPK
Trigger: TTTGGGAACCCCAGCATTTCAGTGTCTACACAACAG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGATTCCCCTGTACTTTaGAAGCCTCTTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSDSPVL*KPLHQE
Trigger: CTCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGATTCCCCTGTACTTTaGAAGCCTCTTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVDSPVL*KPLHQE
Trigger: CTCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGGAGAATCCGCTCCATaGTGGGCTTGGAACACACAT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSGESAP*WAWNTH
Trigger: ATGTGTGTTCCAAGCCCATCATGGAGCGGATTCTCC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGGCCGATCTTGTCTTaGAATCCCACTGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRPILS*NPTVRS
Trigger: ACTTCTTACAGTGGGATTTCAAGACAAGATCGGCCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAATTTTCTTGGCCAGTaGGACTCCATGTTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFNFLGQ*DSMLSQ
Trigger: CTGACTCAACATGGAGTCTCACTGGCCAAGAAAATT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTCTGCCTGTAGTCTGTaGTCTAAGAAAAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSACSL*SKKNWC
Trigger: GCACCAGTTTTTCTTAGATCACAGACTACAGGCAGA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGGTTGAATGGAATATaGACTGACCCAGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRLNGI*TDPEVG
Trigger: TCCCACTTCTGGGTCAGTTCATATTCCATTCAACCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGTCACTTAATGGCTTaGGCCTCAGCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSHLMA*ASAFSS
Trigger: AGAAGAGAAAGCTGAGGCTCAAGCCATTAAGTGACT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGGTGTTCTCAGCTGTaGGCGTGGCTACTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRCSQL*AWLLGD
Trigger: GTCTCCAAGTAGCCACGCTCACAGCTGAGAACACCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCACTTCCTCACAGTGCTaGTCAGACAGAATACCTAGA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFTSSQC*SDRIPR
Trigger: TCTAGGTATTCTGTCTGATCAGCACTGTGAGGAAGT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTCAATTCCCACCTGTaGGTGAGAACATGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFFNSHL*VRTCGV
Trigger: AACACCACATGTTCTCACTCACAGGTGGGAATTGAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGTCAGAGTCATTTCTaGCCCCATAGCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGQSHF*PHSLAL
Trigger: CAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGACGAAGGCCCCAGTTaGCCTGAATGGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYDEGPS*PEWPPF
Trigger: AAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGATCTTTTTGGTCAGGTaGTCAAGCTCATCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWIFLVR*SSSSSG
Trigger: CCCAGAGGATGAGCTTGAGCACCTGACCAAAAAGAT...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp TTTGAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAACCACACAGGGAGAGTaGAAAGTTGAAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FEVLSWARDTTQGECKVETTQGE*KVEGLQ
Trigger: CTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGT...TTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCTCCTCAAGTGTCTTaGCTCCGGGATTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSPQVS*LRDSPV
Trigger: TACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACAAGGTCAGCCAAGATaGTGGTCAAGGAGTCAATCT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAQGQPR*WSRSQS
Trigger: AGATTGACTCCTTGACCAGCATCTTGGCTGACCTTG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGCAAGGTTCAGCCAACTaGAATGAAGGTGTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWQGSAN*NEGVRA
Trigger: AGCTCTGACACCTTCATTGCAGTTGGCTGAACCTTG...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATGTCTCCCACGAGAGTaGACCAAACGAGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKCLPRE*TKRAIP
Trigger: TGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGACA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTCAGGCTTCCTCTATaGCTTTTTCTTCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLRLPL*LFLPIQ
Trigger: CTGAATGGGAAGAAAAAGGCATAGAGGAAGCCTGAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACAGTGGCGCAATCTCTaGTCACTGCAACCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKQWRNL*SLQPLP
Trigger: AGGCAGAGGTTGCAGTGAGCAGAGATTGCGCCACTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGACAGCACTGGACTTaGAAGACCTGGTTATATCCC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARQHWT*KTWLYP
Trigger: GGGATATAACCAGGTCTTGCAAGTCCAGTGCTGTCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCACATATGTATACATGTaGCATGCTGGTGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFTYVYM*HAGVLH
Trigger: GTGCAGCACACCAGCATGGCACATGTATACATATGT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGAGCTGGGGAAGTCTTaGCAACTTAACTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAELGKS*QLNCSC
Trigger: ACAGCTACAGTTAAGTTGGCAAGACTTCCCCAGCTC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTGTATCAGCAAGGGATaGTCAGGGAATGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFCISKG*SGNVFA
Trigger: TGCAAACACATTCCCTGAGCATCCCTTGCTGATACA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGTATCAGCAAGGGATaGTCAGGGAATGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVCISKG*SGNVFA
Trigger: TGCAAACACATTCCCTGAGCATCCCTTGCTGATACA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCTAGGCTATGCTGCTaGTCCATCAACAGTATTGAC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSRLCC*SINSID
Trigger: GTCAATACTGTTGATGGAGCAGCAGCATAGCCTAGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTGGCAAGTGTAATCTaGCAGCTGGTTGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALASVI*QLVESD
Trigger: GTCTGACTCAACCAGCTGGCAGATTACACTTGCCAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGGAGGTATCTTGCTTTaGCCAAACAGAGGCATATTC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFGGILL*PNRGIF
Trigger: GAATATGCCTCTGTTTGGGCAAAGCAAGATACCTCC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCTGGGGTGCAGGCTGTaGTTTCAATGTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSALGCRL*FQCRLL
Trigger: AAGAAGTCTACATTGAAACCACAGCCTGCACCCCAG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTTGAGTGTTCCGATTaGAGCCACAGGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSFECSD*SHRDGS
Trigger: GGACCCATCCCTGTGGCTCCAATCGGAACACTCAAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCACCCAGAGACAGGAACTaGCTGAGTGTTATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SAKLKVFSKNLDCKHSLAPRDRN*LSVIAL
Trigger: CAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGG...TGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCTGAAGTCCTGGTGGTaGAATGTAGGCATAATCCAT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLKSWW*NVGIIH
Trigger: ATGGATTATGCCTACATTCCACCACCAGGACTTCAG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTCCGGCTGAAGTCCTaGTGGTGGAATGTAGGCATA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLRLKS*WWNVGI
Trigger: TATGCCTACATTCCACCACCAGGACTTCAGCCGGAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACCGTTTCCAGGTATTTaGGTGACCTTGTTGACCATA +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSPFPGI*VTLLTI
Trigger: TATGGTCAACAAGGTCACCCAAATACCTGGAAACGG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp AAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCGTATTCGTCAGCAGGTaGATTTTCCATGTCATACAG +
Preference number: 4 (lower is better)
Translates to: KFCLGQEIPHRESAKLKVVFVSR*IFHVIQ
Trigger: CTGTATGACATGGAAAATCCACCTGCTGACGAATAC...GACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTSAFG*QPRWVR
Trigger: TCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATCCCAAAGGAATGGGTaGTCTCCATCCGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSQRNG*SPSVQA
Trigger: TGCCTGCACGGATGGAGACCACCCATTCCTTTGGGA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGGTTCCCAAAGGAATaGGTGGTCTCCATCCGTGCA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGFPKE*VVSIRA
Trigger: TGCACGGATGGAGACCACCCATTCCTTTGGGAACCC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCTCTTCATCAAGAGGTaGTGGAGGAGGAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSALFIKR*WRRKVS
Trigger: GGAAACTTTCCTCCTCCACCACCTCTTGATGAAGAG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATACCAGTGGAGCTCTGTaGAGGCCGAGGCTTATAGGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYTSGAL*RPRLIG
Trigger: CCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCAGATAGCTGGCTCCTaGAATGGATGGTTGACACAA +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAQIAGS*NGWLTQ
Trigger: TTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTTGTGTCCTGTGACTaGGGTCGAAACTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLVSCD*GRNWRR
Trigger: TCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCATATGCCCCAAAGGCTaGCTCTGTTTTAAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFICPKG*LCFKVV
Trigger: CACGACTTTAAAACAGAGCCAGCCTTTGGGGCATAT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCATGGGTTAGTTACTaGGGAAGGCATGAAGCTACA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSWVSY*GRHEAT
Trigger: TGTAGCTTCATGCCTTCCCCAGTAACTAACCCATGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAGGATCAGCTTTCTTaGAAGGGGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKDQLS*KGCVCV
Trigger: CACACACACACACCCCTTCCAAGAAAGCTGATCCTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGCACAGTACGACTCTaGGTACCGTGTGTACATACA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRACTVRL*VPCVHT
Trigger: TGTATGTACACACGGTACCCAGAGTCGTACTGTGCA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCTGGCAAGGACATTTaGCCCCCTGAGCTTCCAATC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSGKDI*PPELPI
Trigger: GATTGGAAGCTCAGGGGGCCAAATGTCCTTGCCAGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCACCAAGAGCTTCCTTaGATAAAGGTTAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFHQELP*IKVKWR
Trigger: CCTCCACTTAACCTTTATCCAAGGAAGCTCTTGGTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACACCAAGAGCTTCCTTaGATAAAGGTTAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVHQELP*IKVKWR
Trigger: CCTCCACTTAACCTTTATCCAAGGAAGCTCTTGGTG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCATGGGGCTCCTTATATaGAAAAGAGAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFMGLLI*KREWWL
Trigger: CAGCCACCATTCTCTTTTCCATATAAGGAGCCCCAT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp GGCTTCAATTTGGAAGACAGGAATTCAGAGACACAGTaGACATTGCCTCCCAAAACTAACATGCTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: GFNLEDRNSETQ*TLPPKTNMLPL
Trigger: TAGGGGCAGCATGTTAGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAATTCCTGTCTTCCAAATTGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp AACGAGCGATCCCAAGAAATGGACTTGAGGCACATTTaGCAGAGGTGTCTTTTTCAGTTTGCTGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: NERSQEMDLRHI*QRCLFQFAGFP
Trigger: TGGGAAACCAGCAAACTGAAAAAGACACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGATCGCTCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp GAGAGTGCACCAAACGAGCGATCCCAAGAAATGGACTaGAGGCACATTTTGCAGAGGTGTCTTTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ESAPNERSQEMD*RHILQRCLFQF
Trigger: AAACTGAAAAAGACACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp CAATTGGTCTCTGAATTTCCCTGGATGACTGGGGGCTaGGTAGTCTGTAAGAAGTCGATATTGTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: QLVSEFPWMTGG*VVCKKSILSSK
Trigger: CTTAGAGGACAATATCGACTTCTTACAGACTACCAAGCCCCCAGTCATCCAGGGAAATTCAGAGACCAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCAATTAAAGGTAGGCCTTaGAGAAGTGGAGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SAKLKVFSKNLDCKHSLAIKGRP*RSGGRG
Trigger: ACCACGGCCTCCACTTCTTCAAGGCCTACCTTTAAT...TGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGGGCTGGGCTGGGCTaGCTTCACCTGCACATTAAA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRAGLG*LHLHIK
Trigger: TTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTTGAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAACTGAAACAGGATCTGTaGTATAGGTCTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FEVLSWARDTTQGECKVELKQDL*YRSSWD
Trigger: GTCCCAAGAAGACCTATATCACAGATCCTGTTTCAG...TTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGGGTTGGTTCGGGATaGCCATTCTCTTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGVGSG*PFSCVL
Trigger: CAGGACACAAGAGAATGGTCATCCCGAACCAACCCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCATTTGCCCCAACCGTTaGTATAGTGAGGTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAICPNR*YSEVGN
Trigger: ATTTCCCACCTCACTATATCAACGGTTGGGGCAAAT...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCACAGAGAAGGTGCTTaGGAAATGTTTAAAGCACGG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAHREGA*EMFKAR
Trigger: CCGTGCTTTAAACATTTCTCAAGCACCTTCTCTGTG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAGTCCTCAATGCAGTaGATGAGCCCGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKSSMQ*MSPPAS
Trigger: GGATGCTGGCGGGCTCATTCACTGCATTGAGGACTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCATTCAGAGACACAGTTaGCATTGCCTCCCAAAACTA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFIQRHS*HCLPKL
Trigger: TAGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAAT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCACAAGATGACATGGTaGTGCTTCTCTTTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFHKMTW*CFSFLV
Trigger: TACCAAGAAAGAGAAGCATCACCATGTCATCTTGTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCTAATGTCACTGGAATaGCTCTTCCTGATGTCACAT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLMSLE*LFLMSH
Trigger: ATGTGACATCAGGAAGAGTCATTCCAGTGACATTAG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATCCTGCCCAGGAGACTaGTGGCAGTTTCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSCPGD*WQFLLT
Trigger: TGTAAGCAGAAACTGCCATCAGTCTCCTGGGCAGGA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTGTGCAAGCTCTAAATaGTCTCTAAAGACCGCAGTA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFCASSK*SLKTAV
Trigger: TACTGCGGTCTTTAGAGATCATTTAGAGCTTGCACA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGTGCAAGCTCTAAATaGTCTCTAAAGACCGCAGTA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVCASSK*SLKTAV
Trigger: TACTGCGGTCTTTAGAGATCATTTAGAGCTTGCACA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGGACTAGGAAGGGGTaGGAAGTCATTTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRTRKG*EVICYL
Trigger: TAAATAGCAAATGACTTCTCACCCCTTCCTAGTCCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGGACTAGGAAGGGGTaGGAAGTCATTTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFRTRKG*EVICYL
Trigger: TAAATAGCAAATGACTTCTCACCCCTTCCTAGTCCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCACTTTTCTAGTCTGTaGACGTGCATCTCAACCAAA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFHFSSL*TCISTK
Trigger: TTTGGTTGAGATGCACGTTCACAGACTAGAAAAGTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCAGCCAAGAAACACATaGAAAAATGCTCACCATCAC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFQPRNT*KNAHHH
Trigger: GTGATGGTGAGCATTTTTTCATGTGTTTCTTGGCTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTCAATTCCCACCTGTaGGTGAGAACATGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAFNSHL*VRTCGV
Trigger: AACACCACATGTTCTCACTCACAGGTGGGAATTGAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGAAAGAGAAAAGGCATaGAATAAAAGCCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVEREKA*NKSLCA
Trigger: CGCACACAGGCTTTTATTTCATGCCTTTTCTCTTTC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACGTTTTTCTCAAAGGTaGCGGCACAGAAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRFSQR*RHRKRK
Trigger: TTTTCTCTTTCTGTGCCGTCACCTTTGAGAAAAACG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGAGGCATATTCAAGTaGATATGGAGCCAACTGACT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRGIFK*IWSQLT
Trigger: AGTCAGTTGGCTCCATATTCACTTGAATATGCCTCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGATAGCCTGGCCCTGCTaGATAGTAGCCTTCATAATA +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWIAWPC*IVAFII
Trigger: TATTATGAAGGCTACTATGCAGCAGGGCCAGGCTAT...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACCCATAGCCTGGCCCTaGTGCATAGTAGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKPIAWP*CIVAFI
Trigger: TATGAAGGCTACTATGCAGCAGGGCCAGGCTATGGG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAATCCTGGCTCTGGAGTaGATGTTTTTAACCACTATC +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSILALE*MFLTTI
Trigger: GATAGTGGTTAAAAACATGCACTCCAGAGCCAGGAT...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTGTCTTTTTCAGTTTaGTGGTTTCCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVSFSV*WFPTDG
Trigger: GCCATCTGTGGGAAACCAGCAAACTGAAAAAGACAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGTCTCCCACGAGAGTaGACCAAACGAGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDCLPRE*TKRAIP
Trigger: TGGGATCGCTCGTTTGGTGCACTCTCGTGGGAGACA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTGTCCATACTGTGCATaGTGGGTTATATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFCPYCA*WVIFWQ
Trigger: CTGCCAAAATATAACCCAGCATGCACAGTATGGACA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGACATGTACCCTTGCTaGAAGAATAGAAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFDMYPC*KNRRCS
Trigger: GCTACATCTTCTATTCTTGCAGCAAGGGTACATGTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACCTACGGCGGTTTCTaGCTCTGTGGAACGTACATC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTYGGF*LCGTYI
Trigger: GATGTACGTTCCACAGAGGCAGAAACCGCCGTAGGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGAGAAAGACTAAAATaGATTGCTAACCTACGGCGG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRERLK*IANLRR
Trigger: CCGCCGTAGGTTAGCAATGCATTTTAGTCTTTCTCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACCTGTTGCAGCAACATaGACGTGGTGTGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKPVAAT*TWCALS
Trigger: ACTGAGAGCACACCACGTGCATGTTGCTGCAACAGG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCTCCAGGGAGGGAAATaGATAAAACACTTATCAGGT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLQGGK*IKHLSG
Trigger: ACCTGATAAGTGTTTTATGCATTTCCCTCCCTGGAG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTAAAATGCAAACTCTaGCCAAATACCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVKCKL*PNTNSP
Trigger: TGGGGAGTTGGTATTTGGGCAGAGTTTGCATTTTAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCATGTTAGTTTCAATTTaGTGCCTACAGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFMLVSI*CLQRED
Trigger: GTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACAT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATGTTAGTTTCAATTTaGTGCCTACAGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVMLVSI*CLQRED
Trigger: GTCCTCCCTCTGTAGGCAGCAAATTGAAACTAACAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTCAGGGAATGTGTTTaGAGCCCGTTTCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLRECV*SPFHGS
Trigger: GCTACCGTGAAACGGGCTGCAAACACATTCCCTGAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACACTCTAGGCTATGCTaGTGCTCCATCAACAGTATT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAHSRLC*CSINSI
Trigger: AATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGGACCCTCTCCTATTaGCACCTCTGGGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSWTLSY*HLWVRM
Trigger: CATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGAATGGTGGCTGACTaGAATGGCATGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRMVAD*NGMESI
Trigger: GATGGACTCCATGCCATTGCAGTCAGCCACCATTCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACCCAGAGACAGGAACTaGCTGAGTGTTATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKPRDRN*LSVIAL
Trigger: CAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCTGAAGTCCTGGTGGTaGAATGTAGGCATAATCCAT +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSALKSWW*NVGIIH
Trigger: ATGGATTATGCCTACATTCCACCACCAGGACTTCAG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTGAAGTCCTGGTGGTaGAATGTAGGCATAATCCAT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALKSWW*NVGIIH
Trigger: ATGGATTATGCCTACATTCCACCACCAGGACTTCAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCCCAGTTGCCCTGAATaGCCACCCTTTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYPSCPE*PPFGCN
Trigger: ATTGCAGCCAAAGGGTGGCCATTCAGGGCAACTGGG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATCATACAGCATCTTTTTaGTCAGGTGCTCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNHTASF*SGAQAH
Trigger: ATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATG...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSGWQPR*VRHCWN
Trigger: ATTCCAACAATGTCTCACCCATCTTGGCTGCCACCC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGCTCACCAGTGCTTTTaGGTGGCAGCCAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYAHQCF*VAAKMG
Trigger: ACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCCCAAAGGAATGGGTaGTCTCCATCCGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSQRNG*SPSVQA
Trigger: TGCCTGCACGGATGGAGACCACCCATTCCTTTGGGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGGAATCTCAGATAGCTaGCTCCTGGAATGGATGGTT +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFGISDS*LLEWMV
Trigger: AACCATCCATTCCAGGAGCCAGCTATCTGAGATTCC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGTTTTTGGACTGGTGTaGTCAGTTGACCTGTCATTA +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSVFGLV*SVDLSL
Trigger: TAATGACAGGTCAACTGACCACACCAGTCCAAAAAC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGTGTGTGTTTTTGGACTaGTGTGGTCAGTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWCVFLD*CGQLTC
Trigger: ACAGGTCAACTGACCACACCAGTCCAAAAACACACA...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCATTTAAGGGAAGTGCTTaGCAATGCTATTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSFKGSA*QCYLQS
Trigger: GGACTGCAAATAGCATTGCCAAGCACTTCCCTTAAA...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTCATCAGCATGGTCTaGCTTCAATTTGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVISMV*LQFGRQ
Trigger: CTGTCTTCCAAATTGAAGCCAGACCATGCTGATGAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGTGAGTCACCACACCTaGCCTTATTTTCGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFVSHHT*PYFRVL
Trigger: TAAAACTCGAAAATAAGGCCAGGTGTGGTGACTCAC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGCGCAACTACATACTaGCCAGGACTAAGAAGATAT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSATTY*PGLRRY
Trigger: ATATCTTCTTAGTCCTGGCCAGTATGTAGTTGCGCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGAAGTGGGAATCTCATaGATGGCATATGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFEVGIS*MAYALA
Trigger: AGCTAATGCATATGCCATCCATGAGATTCCCACTTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCCATACTGTGCATGCTaGGTTATATTTTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFPYCAC*VIFWQI
Trigger: GATCTGCCAAAATATAACCCAGCATGCACAGTATGG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATATGCCCCAAAGGCTaGCTCTGTTTTAAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAICPKG*LCFKVV
Trigger: CACGACTTTAAAACAGAGCCAGCCTTTGGGGCATAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGTTTGTTCTTATCAGTaGCCTTTTCCCACCAACTTC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFVCSYQ*PFPTNF
Trigger: GAAGTTGGTGGGAAAAGGCCACTGATAAGAACAAAC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAATCCATTCCTGGGGTaGGAATACTCTGTCTATTCG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRANPFLG*EYSVYS
Trigger: CGAATAGACAGAGTATTCCCACCCCAGGAATGGATT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAAAGCCTGTGTGCGTaGCTCAGGGAAAATTACTAT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKSLCA*LRENYY
Trigger: ATAGTAATTTTCCCTGAGCCACGCACACAGGCTTTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGATAAAGGTTAAGTaGAGGTATCTTGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWIKVK*RYLALP
Trigger: GGGCAAAGCAAGATACCTCCACTTAACCTTTATCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTGACTGCAATGGCATaGAGTCCATCTTCCATAGTT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALTAMA*SPSSIV
Trigger: AACTATGGAAGATGGACTCCATGCCATTGCAGTCAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATGGGGCTCCTTATATaGAAAAGAGAATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAMGLLI*KREWWL
Trigger: CAGCCACCATTCTCTTTTCCATATAAGGAGCCCCAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp TTAGCCTTTAGCCGGACATTGACAGCCTTCCCTAGATaGGTCCTAACCTACTACTTGAACCTTATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LAFSRTLTAFPR*VLTYYLNLISQ
Trigger: TTGGGAAATAAGGTTCAAGTAGTAGGTTAGGACCAATCTAGGGAAGGCTGTCAATGTCCGGCTAAAGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CAA 72 bp ACACCCAACACAGTGCTAATATCTGCACTAAAATCCTaGACATCTGTGACTCTCTTGTCCTTCCTAGGAACC +
Preference number: 4 (lower is better)
Translates to: TPNTVLISALKS*TSVTLLSFLGT
Trigger: GGTTCCTAGGAAGGACAAGAGAGTCACAGATGTCAAGGATTTTAGTGCAGATATTAGCACTGTGTTGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CAA 72 bp GGACTCAGACTCAATAGGAAAATAGAGATGTCCTGCTaGTTCTTTTGTGGAGGGTCAAAGGACATGTACCCT +
Preference number: 4 (lower is better)
Translates to: GLRLNRKIEMSC*FFCGGSKDMYP
Trigger: AGGGTACATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGACATCTCTATTTTCCTATTGAGTCTGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTCTTCTTGGGACCAGTaGCTGGATACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYSSWDQ*LDTSQE
Trigger: CTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTGTTGTGTAGACACTaGAATGCTGGGGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLLCRH*NAGVPK
Trigger: TTTGGGAACCCCAGCATTTCAGTGTCTACACAACAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGTGAGACTCCATGTTaGGTCAGTATGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYSETPC*VSMVWG
Trigger: CCCCCAGACCATACTGACTCAACATGGAGTCTCACT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGTGAGACTCCATGTTaGGTCAGTATGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSETPC*VSMVWG
Trigger: CCCCCAGACCATACTGACTCAACATGGAGTCTCACT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACAGCATCTAACAACCTaGTGCCTTATGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKQHLTT*CLMLGH
Trigger: GTGTCCCAGCATAAGGCATCAGGTTGTTAGATGCTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCACTGAGAACAAGTTTTaGACTTGTCTGGACCACTAT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFTENKF*TCLDHY
Trigger: ATAGTGGTCCAGACAAGTTCAAAACTTGTTCTCAGT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTGAATAACTTGGCCTaGAATATTCATGGTTGCACC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVNNLA*NIHGCT
Trigger: GGTGCAACCATGAATATTTCAGGCCAAGTTATTCAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGCCTCCCAAAGCATaGTTCTATTTTATTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWPPKA*FYFIWE
Trigger: TTCCCAAATAAAATAGAATCATGCTTTGGGAGGCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGTCATCCAGAGCAATaGGGAAAGCATTTGTACATT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSHPEQ*GKHLYI
Trigger: AATGTACAAATGCTTTCCTCATTGCTCTGGATGACT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAGGTACAGCTTCCTaGGGGACGCAGCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKGTAS*GTQLKR
Trigger: TCTCTTGAGCTGCGTCCCTCAGGAAGCTGTACCTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACAGATTCCACCCATGTaGGTCTCTACTCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKQIPPM*VSTQAY
Trigger: GTATGCCTGAGTAGAGACTCACATGGGTGGAATCTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGAGAGAATCACGCATaGGAGATAAATACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRENHA*EINTCF
Trigger: GAAACAGGTATTTATCTCTCATGCGTGATTCTCTCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGGGGATATTGGAAGTaGGTGACTTTCTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFRGYWK*VTFFHL
Trigger: CAAATGAAAGAAAGTCACTCACTTCCAATATCCCCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGAGAAGGAATGTGCTaGCACTTTAACACTCTAAAC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGEGMC*HFNTLN
Trigger: GTTTAGAGTGTTAAAGTGTCAGCACATTCCTTCTCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAATCTGCCAGCTGGTTaGGTCAGACGACACATTGAG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKNLPAG*VRRHIE
Trigger: CTCAATGTGTCGTCTGACTCAACCAGCTGGCAGATT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCATGGGCTGACTTCACCTaGACATTAAAGGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SAKLKVFSKNLDCKHSLAWADFT*TLKVGL
Trigger: AAGGCCTACCTTTAATGTGCAGGTGAAGTCAGCCCA...TGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATCTTTTTGGTCAGGTaGTCAAGCTCATCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSIFLVR*SSSSSG
Trigger: CCCAGAGGATGAGCTTGAGCACCTGACCAAAAAGAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGCTGATGCAAACACACTaGTATGTATTCTTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWLMQTH*YVFFPL
Trigger: GAGCGGAAAGAATACATAGCAGTGTGTTTGCATCAG...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCCTGATCCATGGCAGTaGATCCTGTACCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYPDPWQ*ILYLPQ
Trigger: TTGGGGAAGGTACAGGATGCACTGCCATGGATCAGG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCAGGGCTCGCAGTATaGTTTCTTTTCCACAGCATA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAGLAV*FLFHSI
Trigger: TATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTGTCAAATAGTCAGTaGTACTTGAGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLSNSQ*YLRSSA
Trigger: TGCTGATGACCTCAAGTAGCACTGACTATTTGACAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTGTCAAATAGTCAGTaGTACTTGAGGTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLSNSQ*YLRSSA
Trigger: TGCTGATGACCTCAAGTAGCACTGACTATTTGACAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAGGTCTCACTATGTTaGCCAGGCTGGTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKVSLC*PGWCQT
Trigger: AGTTTGACACCAGCCTGGGCAACATAGTGAGACCTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGATCTCCCTAGCAGCTaGCATAATTTCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKDLPSS*HNFPNT
Trigger: GGTGTTGGGGAAATTATGGCAGCTGCTAGGGAGATC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTATAAAGGAATTAGCTaGAGTGTTTCACCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFYKGIS*SVSPLS
Trigger: AGAGAGGGGTGAAACACTGCAGCTAATTCCTTTATA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTCCTGTCCATACTGTaGATGCTGGGTTATATTTTG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVFLSIL*MLGYIL
Trigger: CAAAATATAACCCAGCATGCACAGTATGGACAGGAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGTACACATGTGGATTTaGCACCTGGCAGTCAATTGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSVHMWI*HLAVNW
Trigger: CCAATTGACTGCCAGGTGGCAAATCCACATGTGTAC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGAGAAAGACTAAAATaGATTGCTAACCTACGGCGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRARERLK*IANLRR
Trigger: CCGCCGTAGGTTAGCAATGCATTTTAGTCTTTCTCT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCCTGTTGCAGCAACATaGACGTGGTGTGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDPVAAT*TWCALS
Trigger: ACTGAGAGCACACCACGTGCATGTTGCTGCAACAGG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTACTAAGTGAGCATTaGTGTCACCCAAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLLSEH*CHPKRK
Trigger: CTTTCTCTTTGGGTGACAGCAATGCTCACTTAGTAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTAGTTTCAATTTGCTaGCTACAGAGGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALVSIC*LQREDQ
Trigger: TTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCATCACTCTAGGCTATaGTGCTGCTCCATCAACAGT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHHSRL*CCSINS
Trigger: ACTGTTGATGGAGCAGCAGCATAGCCTAGAGTGATG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATGGACCCTCTCCTATTaGCACCTCTGGGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKWTLSY*HLWVRM
Trigger: CATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTCAGAGCAAAGCCATaGTGTGTTTCTTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLRAKP*CVSSQS
Trigger: GGACTGGGAAGAAACACAGCATGGCTTTGCTCTGAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCCCAGAGACAGGAACTaGCTGAGTGTTATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYPRDRN*LSVIAL
Trigger: CAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTCCGGCTGAAGTCCTaGTGGTGGAATGTAGGCATA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLRLKS*WWNVGI
Trigger: TATGCCTACATTCCACCACCAGGACTTCAGCCGGAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGGAGGAGTGTACCCTaGTTCCCGTTTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRRSVP*FPFPGI
Trigger: AATACCTGGAAACGGGAACCAGGGTACACTCCTCCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCATACAGCATCTTTTTaGTCAGGTGCTCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSAHTASF*SGAQAH
Trigger: ATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACATACAGCATCTTTTTaGTCAGGTGCTCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAHTASF*SGAQAH
Trigger: ATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTTTGAAGTTCTGTCTTaGGCAAGAGATACCACACAG +
Preference number: 4 (lower is better)
Translates to: EIPHRESAKLKVFSKNLDFEVLS*ARDTTQ
Trigger: CTGTGTGGTATCTCTTGCCCAAGACAGAACTTCAAA...GTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTCCAGGTTGTTTGTATaGGTTGTACTTAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSRLFV*VVLRFW
Trigger: CCAAAACCTAAGTACAACCCATACAAACAACCTGGA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTTGTGTCCTGTGACTaGGGTCGAAACTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLVSCD*GRNWRR
Trigger: TCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACAACTCTCATGCATCTaGACTCAAATACTTTACCAG +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSQLSCI*TQILYQ
Trigger: CTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACTAAGTAGTAGAGCTTaGACAGTTCTTGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSLSSRA*TVLEGK
Trigger: TTTCCCTTCAAGAACTGTCCAAGCTCTACTACTTAG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTCCACAGCATAGAATaGCTGCCCTCGGAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKFHSIE*LPSELV
Trigger: AACAAGCTCCGAGGGCAGCCATTCTATGCTGTGGAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCATCTGTGCAAAAATGTaGAAGTCCTTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFICAKM*KSLGTK
Trigger: CTTTGTTCCCAAGGACTTCCACATTTTTGCACAGAT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTAATAAGTATGGCTTaGCAGTTGGCAAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLISMA*QLASKC
Trigger: ACACTTGCTTGCCAACTGCCAAGCCATACTTATTAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCTAAAGCAGGGGTATaGAACATGCTGTCATATTTC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAAKAGV*NMLSYF
Trigger: GAAATATGACAGCATGTTCCATACCCCTGCTTTAGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAACAAATTCTAATGTCTaGCCCTCAGAACATCCTTCA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVTNSNV*PSEHPS
Trigger: TGAAGGATGTTCTGAGGGCCAGACATTAGAATTTGT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACCGCAGTACACATGTaGATTTGCCACCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTAVHM*ICHLAV
Trigger: GACTGCCAGGTGGCAAATCCACATGTGTACTGCGGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACGGTTTCTGCCTCTGTaGAACGTACATCGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRFLPL*NVHRGS
Trigger: TGAACCACGATGTACGTTCCACAGAGGCAGAAACCG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGCAAAGTCTATCAAATaGCAAAGGCCAAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFAKSIK*QRPNLR
Trigger: TCTGAGATTTGGCCTTTGCCATTTGATAGACTTTGC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCTTCTAGAGCATACATaGAGACTTTCTAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLLEHT*RLSRRF
Trigger: AAACCTCCTAGAAAGTCTCCATGTATGCTCTAGAAG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGGATTAAGAAAAGGTaGCACATATACACCATGGAG +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVWIKKR*HIYTME
Trigger: CTCCATGGTGTATATGTGCCACCTTTTCTTAATCCA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCACACTTTTACACTGTTaGTGGGACTGTGAACTAGTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFTLLHC*WDCELV
Trigger: AACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTCATTTTCCACTCACTaGCCACAATATTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSFSTH*PQYSSS
Trigger: GCTTGATGAATATTGTGGCCAGTGAGTGGAAAATGA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATTATGCTAGAAGGATaGCATGGTCCCATGTTAGTT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVIMLEG*HGPMLV
Trigger: AACTAACATGGGACCATGCCATCCTTCTAGCATAAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGGAAAAGAGAATGGTaGCTGACTGCAATGGCATGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSWKREW*LTAMAW
Trigger: CCATGCCATTGCAGTCAGCCACCATTCTCTTTTCCA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp GGCTATGCTGCTGCTCCATCAACAGTATTGACAGTTTaGTCAGTGATGGAACTATGGAAACAAAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: GYAAAPSTVLTV*SVMELWKQKPS
Trigger: TGATGGCTTTTGTTTCCATAGTTCCATCACTGACAAAACTGTCAATACTGTTGATGGAGCAGCAGCATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGATTCCCCTGTACTTTaGAAGCCTCTTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSDSPVL*KPLHQE
Trigger: CTCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGGCTTATCACCCTGGATaGGATAAATACAGGAACAAA +
Preference number: 4 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWAYHPG*DKYRNK
Trigger: TTTGTTCCTGTATTTATCTCATCCAGGGTGATAAGC...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTCCCCTCATGAGAAATaGCTTCACTTCTCTACTATC +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFSPHEK*LHFSTI
Trigger: GATAGTAGAGAAGTGAAGTCATTTCTCATGAGGGGA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTTCTGCTCTGTCTCTaGGCCTCAAAGTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLLLCL*ASKFPL
Trigger: AAGTGGGAACTTTGAGGCTCAGAGACAGAGCAGAAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTGCCGGCTGAACAGGTaGCTGAATCTAAAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYCRLNR*LNLKVS
Trigger: ACTGACCTTTAGATTCAGTCACCTGTTCAGCCGGCA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAAGAACCCACATCTTTaGGCTGCAGAGATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYKNPHL*AAEMPA
Trigger: TGCTGGCATCTCTGCAGCTCAAAGATGTGGGTTCTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGCCAAGAGGAATGGTaGGAGGCTTTGAGGTTACAT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSQEEW*EALRLH
Trigger: ATGTAACCTCAAAGCCTCTCACCATTCCTCTTGGCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACCCAAGAAATGGACTTaGGGCACATTTTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKPKKWT*GTFCRG
Trigger: ACCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTTTCCAAGAATCTATaGCCTCAGTCCCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAFSKNL*PQSLMK
Trigger: TTTCATCAGGGACTGAGGTCATAGATTCTTGGAAAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACATTCAGTGCCAAGTTaGCTGAATGCGATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKHSVPS*LNAIVA
Trigger: AGCCACAATCGCATTCAGTCAACTTGGCACTGAATG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGAAGATATGGGATGGTaGTTCATCAGGAAAATAACA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVEDMGW*FIRKIT
Trigger: TGTTATTTTCCTGATGAATCACCATCCCATATCTTC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAAGTTACTTAGGGGCTaGTTCTCTAACAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFKLLRG*FSNSDY
Trigger: ATAATCACTGTTAGAGAATCAGCCCCTAAGTAACTT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAATTTCCAGAATCCATaGTATTTTGGCCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVNFQNP*YFGQCR
Trigger: TCTGCATTGGCCAAAATATCATGGATTCTGGAAATT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAACCTCTACATGCCAATaGATTCTAAATGATATGGTC +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVTSTCQ*ILNDMV
Trigger: GACCATATCATTTAGAATTCATTGGCATGTAGAGGT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTATACACCATGGAGGTaGGGCACTTTTCTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYTPWR*GTFLVC
Trigger: ACAGACTAGAAAAGTGCCTCACCTCCATGGTGTATA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAATCAAAACCACTATaGGATACCATCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKSKPL*DTISHQ
Trigger: CTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCAGATTCCACCCATGTaGGTCTCTACTCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYQIPPM*VSTQAY
Trigger: GTATGCCTGAGTAGAGACTCACATGGGTGGAATCTG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGAAGATCACAGATTTaGGTCAGTCTCGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRRSQI*VSLAKR
Trigger: CCTCTTTGCGAGACTGACTCAAATCTGTGATCTTCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAATCTGCCAGCTGGTTaGGTCAGACGACACATTGAG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYNLPAG*VRRHIE
Trigger: CTCAATGTGTCGTCTGACTCAACCAGCTGGCAGATT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCATTAATCTTTTTGGTCAGGTaGTCAAGCTCATCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AKLKVFSKNLDCKHSLALIFLVR*SSSSSG
Trigger: CCCAGAGGATGAGCTTGAGCACCTGACCAAAAAGAT...TAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATCTTTTTGGTCAGGTaGTCAAGCTCATCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIFLVR*SSSSSG
Trigger: CCCAGAGGATGAGCTTGAGCACCTGACCAAAAAGAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCTCACTTGTCACTTTCTaGCTTGTGCTTATAACACCA +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSASLVTF*LVLITP
Trigger: TGGTGTTATAAGCACAAGGCAGAAAGTGACAAGTGA...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGAATCTAAAGGTCAGTaGTCGCCTTGGCGGTCAACA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYESKGQ*SPWRST
Trigger: TGTTGACCGCCAAGGCGAGCACTGACCTTTAGATTC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAAGTTCATGGAGGGCTaGTTCCTGTCCATACTGTGC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYKFMEG*FLSILC
Trigger: GCACAGTATGGACAGGAAGCAGCCCTCCATGAACTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAAATAGAGATGTCCTaGTTGTTCTTTTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKIEMS*LFFCGG
Trigger: CCCTCCACAAAAGAACAAGCAGGACATCTCTATTTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATATCGGAAATGCCTGTTaGAGCAACATGCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYIGNAC*SNMHVV
Trigger: CACCACGTGCATGTTGCTGCAACAGGCATTTCCGAT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATCGGAAATGCCTGTTaGAGCAACATGCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDIGNAC*SNMHVV
Trigger: CACCACGTGCATGTTGCTGCAACAGGCATTTCCGAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCGGCTCTATCGGAAATaGCTGTTGCAGCAACATGCA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRLYRK*LLQQHA
Trigger: TGCATGTTGCTGCAACAGGCATTTCCGATAGAGCCG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACATATGTATACATGTaGCATGCTGGTGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTYVYM*HAGVLH
Trigger: GTGCAGCACACCAGCATGGCACATGTATACATATGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTTCTCCTACAATCATaGACTGTCTACCTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLLLQS*TVYLVL
Trigger: TAGGACGAGGTAGACAGTGCATGATTGTAGGAGAAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTGGCAAGTGTAATCTaGCAGCTGGTTGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLASVI*QLVESD
Trigger: GTCTGACTCAACCAGCTGGCAGATTACACTTGCCAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAAGTATCACCCTTTTaGCAAAGAGTCAACTGGATT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKVSPF*QRVNWI
Trigger: AATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTATATGTTTTTGTGTaGCTTTCCCTAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLYVFV*LSLSQG
Trigger: TCCCTGACTTAGGGAAAGGCACACAAAAACATATAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCCGTTTCCAGGTATTTaGGTGACCTTGTTGACCATA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSPFPGI*VTLLTI
Trigger: TATGGTCAACAAGGTCACCCAAATACCTGGAAACGG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTCTTCAGCAAAAATTTaGACTGTAAACACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNSSAKI*TVNTAW
Trigger: CCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGA...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGWQPR*VRHCWN
Trigger: ATTCCAACAATGTCTCACCCATCTTGGCTGCCACCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCCAGGTTGTTTGTATaGGTTGTACTTAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRASRLFV*VVLRFW
Trigger: CCAAAACCTAAGTACAACCCATACAAACAACCTGGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGTCAGCCAAGATGCTaGTCAAGGAGTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGQPRC*SRSQSQ
Trigger: CTGAGATTGACTCCTTGACCAGCATCTTGGCTGACC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACTCAACAAAAATACTaGTCTCCAACAGATTGGGAG +
Preference number: 4 (lower is better)
Translates to: STTENVKGTGLKGSDSSATQQKY*SPTDWE
Trigger: CTCCCAATCTGTTGGAGACCAGTATTTTTGTTGAGT...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGAAGACCTGATCCATaGCAGTGCATCCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGRPDP*QCILYL
Trigger: AAGGTACAGGATGCACTGCCATGGATCAGGTCTTCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATACATGGGAAAAGAATaGCTACTCTTTACAGTCACA +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVYMGKE*LLFTVT
Trigger: TGTGACTGTAAAGAGTAGCCATTCTTTTCCCATGTA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCTCTAGGCAACAGATaGACAATCGCTTGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSALGNR*TIACLN
Trigger: GTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTGGTTTCCCACAGATaGCTAAAGCAGGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLVSHR*LKQGYG
Trigger: TCCATACCCCTGCTTTAGCCATCTGTGGGAAACCAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACTACAGGTTTTGTGTaGCACCAAAGAGAACATATG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRATTGFV*HQREHM
Trigger: CATATGTTCTCTTTGGTGCCACACAAAACCTGTAGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCATGGGTTAGTTACTaGGGAAGGCATGAAGCTACA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSWVSY*GRHEAT
Trigger: TGTAGCTTCATGCCTTCCCCAGTAACTAACCCATGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACTTGGAGACAGCACTaGACTTGCAAGACCTGGTTA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTWRQH*TCKTWL
Trigger: TAACCAGGTCTTGCAAGTCCAGTGCTGTCTCCAAGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGTCTCTGAATTTCCCTaGATGACTGGGGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYVSEFP*MTGGLV
Trigger: TACCAAGCCCCCAGTCATCCAGGGAAATTCAGAGAC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGAGGTTTTTGGTGAATaGAATGTAAAGGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFEVFGE*NVKELS
Trigger: AGAGAGTTCCTTTACATTCCATTCACCAAAAACCTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGTGGAACGTACATCGTaGTTCATGGGAGAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDVERTS*FMGERL
Trigger: AAGCCTCTCTCCCATGAACCACGATGTACGTTCCAC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCGGTTTCTGCCTCTGTaGAACGTACATCGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRFLPL*NVHRGS
Trigger: TGAACCACGATGTACGTTCCACAGAGGCAGAAACCG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGCAGCAACATGCACGTaGTGTGCTCTCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKAATCT*CALSKC
Trigger: ACATTTACTGAGAGCACACCACGTGCATGTTGCTGC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAATCCATTCCTGGGGTaGGAATACTCTGTCTATTCG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSNPFLG*EYSVYS
Trigger: CGAATAGACAGAGTATTCCCACCCCAGGAATGGATT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATTATGCTAGAAGGATaGCATGGTCCCATGTTAGTT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAIMLEG*HGPMLV
Trigger: AACTAACATGGGACCATGCCATCCTTCTAGCATAAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTAAAAAGGCAGACTTaGAGAAGGTGCAATCGTTTT +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLKRQT*RRCNRF
Trigger: AAAACGATTGCACCTTCTCCAAGTCTGCCTTTTTAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGGCTATATTCAGAGCTaGGGAAGTCTTGCCAACTTA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSGYIQS*GSLANL
Trigger: TAAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATGCACAGTACGACTCTaGGTACCGTGTGTACATACA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKCTVRL*VPCVHT
Trigger: TGTATGTACACACGGTACCCAGAGTCGTACTGTGCA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTGACTGCAATGGCATaGAGTCCATCTTCCATAGTT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLTAMA*SPSSIV
Trigger: AACTATGGAAGATGGACTCCATGCCATTGCAGTCAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp ACATTATCAGCCCTATTGTCAAATAGTCAGTGCTACTaGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAA +
Preference number: 4 (lower is better)
Translates to: TLSALLSNSQCY*RSSAWSGFNLE
Trigger: TTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCACTGACTATTTGACAATAGGGCTGATAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp GAAATTTATTGCAATGTGCTTCCTTCTGCCCATTGTTaGTTCTTATCAGTGGCCTTTTCCCACCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: EIYCNVLPSAHC*FLSVAFSHQLP
Trigger: AGGAAGTTGGTGGGAAAAGGCCACTGATAAGAACAAACAATGGGCAGAAGGAAGCACATTGCAATAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp CTTCCTTGGATAAAGGTTAAGTGGAGGTATCTTGCTTaGCCCAAACAGAGGCATATTCAAGTGAATATGGAG +
Preference number: 4 (lower is better)
Translates to: LPWIKVKWRYLA*PKQRHIQVNME
Trigger: CTCCATATTCACTTGAATATGCCTCTGTTTGGGCAAAGCAAGATACCTCCACTTAACCTTTATCCAAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTGAAACAGGATCTGTaGTATAGGTCTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLKQDL*YRSSWD
Trigger: GTCCCAAGAAGACCTATATCACAGATCCTGTTTCAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTGTTGTGTAGACACTaGAATGCTGGGGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLLCRH*NAGVPK
Trigger: TTTGGGAACCCCAGCATTTCAGTGTCTACACAACAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGAATCTTTAGACCAGTaGGAAATGGGAACATACACA +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFESLDQ*EMGTYT
Trigger: TGTGTATGTTCCCATTTCTCACTGGTCTAAAGATTC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGGCCGATCTTGTCTTaGAATCCCACTGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRPILS*NPTVRS
Trigger: ACTTCTTACAGTGGGATTTCAAGACAAGATCGGCCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACAGGAATGCAGAAGTaGATGGGATGGAGCATAATC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTGMQK*MGWSII
Trigger: GATTATGCTCCATCCCATTCACTTCTGCATTCCTGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTCAGTGATTGTCTTTaGAAGTGTGGTGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAFSDCL*KCGVNV
Trigger: GACATTTACACCACACTTTCAAAGACAATCACTGAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATATAGTCAGTGCTACTTaGGGTCATCAGCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYIVSAT*GHQHGL
Trigger: CAGACCATGCTGATGACCTCAAGTAGCACTGACTAT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCATTTAAAGACCTATaGGATACTTCCAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRASFKDL*DTSKTR
Trigger: CCTTGTCTTGGAAGTATCTCATAGGTCTTTAAATGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATCTGCCTGTAGTCTGTaGTCTAAGAAAAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSACSL*SKKNWC
Trigger: GCACCAGTTTTTCTTAGATCACAGACTACAGGCAGA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCCTGGCTAACACTGTaGAACTCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSWLTL*NSISTK
Trigger: TTTAGTAGAGATGGAGTTTCACAGTGTTAGCCAGGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCATTCAGTGCCAAGTTaGCTGAATGCGATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYHSVPS*LNAIVA
Trigger: AGCCACAATCGCATTCAGTCAACTTGGCACTGAATG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAATATGGACTCCTAAATaGTTAGAGAAAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAIWTPK*LEKEAA
Trigger: AGCAGCTTCTTTCTCTAATCATTTAGGAGTCCATAT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTAATGTCACTGGAATaGCTCTTCCTGATGTCACAT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLMSLE*LFLMSH
Trigger: ATGTGACATCAGGAAGAGTCATTCCAGTGACATTAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTTACTGGGGAAGGCATaGAGCTACACAACAACTGTC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLLGKA*SYTTTV
Trigger: GACAGTTGTTGTGTAGCTTCATGCCTTCCCCAGTAA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGTCACTTAATGGCTTaGGCCTCAGCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSHLMA*ASAFSS
Trigger: AGAAGAGAAAGCTGAGGCTCAAGCCATTAAGTGACT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCAGTCAATTGGTCTCTaGATTTCCCTGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYQSIGL*ISLDDW
Trigger: CCAGTCATCCAGGGAAATTCAGAGACCAATTGACTG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGCACCTACTCTTTCTaGTGGTATGTTTTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSTYSF*WYVFEG
Trigger: GCCTTCAAAAACATACCATCAGAAAGAGTAGGTGCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACACTCTTGAAATTATaGAACATAGCTGTTCCAACC +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRATLLKL*NIAVPT
Trigger: GGTTGGAACAGCTATGTTTCATAATTTCAAGAGTGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCATTAATAGCCTGGCCCTGCTaGATAGTAGCCTTCATAATA +
Preference number: 4 (lower is better)
Translates to: AKLKVFSKNLDCKHSLALIAWPC*IVAFII
Trigger: TATTATGAAGGCTACTATGCAGCAGGGCCAGGCTAT...TAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATAGCCTGGCCCTGCTaGATAGTAGCCTTCATAATA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIAWPC*IVAFII
Trigger: TATTATGAAGGCTACTATGCAGCAGGGCCAGGCTAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAAGGTCAGCCAAGATaGTGGTCAAGGAGTCAATCT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQGQPR*WSRSQS
Trigger: AGATTGACTCCTTGACCAGCATCTTGGCTGACCTTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGAAGCAAAAATCCTGTaGAATTTCCCCATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFEAKIL*NFPIFV
Trigger: CACAAAGATGGGGAAATTGCACAGGATTTTTGCTTC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGCAGGGCTCGCAGTATaGTTTCTTTTCCACAGCATA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYAGLAV*FLFHSI
Trigger: TATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACAGGGGTATGGAACATaGTGTCATATTTCATTCATA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAQGYGT*CHISFI
Trigger: TATGAATGAAATATGACAGCATGTTCCATACCCCTG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTCATGGATGGCATATaGATTAGCTTGCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLMDGI*ISLLPV
Trigger: AACAGGAAGCAAGCTAATGCATATGCCATCCATGAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATACCAAAGAGAACATATaGCCCAAAGGCTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYTKENI*PKGWLC
Trigger: ACAGAGCCAGCCTTTGGGGCATATGTTCTCTTTGGT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTATATCCCCAAATCTaGCACTTCCCAGCTATGTCA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLYPQI*HFPAMS
Trigger: TGACATAGCTGGGAAGTGGCAGATTTGGGGATATAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGTACACATGTGGATTTaGCACCTGGCAGTCAATTGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYVHMWI*HLAVNW
Trigger: CCAATTGACTGCCAGGTGGCAAATCCACATGTGTAC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTGTATACATGTGCCATaGTGGTGTGCTGCACCCATT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYCIHVP*WCAAPI
Trigger: AATGGGTGCAGCACACCAGCATGGCACATGTATACA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAGATATATCATAACCTaGTCAAGCTACTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRYIIT*SSYSPI
Trigger: AATAGGAGAGTAGCTTGAGCAGGTTATGATATATCT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACCGTTTCCAGGTATTTaGGTGACCTTGTTGACCATA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKPFPGI*VTLLTI
Trigger: TATGGTCAACAAGGTCACCCAAATACCTGGAAACGG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTTGAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAACTGTAAACACAGCTTaGCATTATCAGCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: FEVLSWARDTTQGECKVETVNTA*HYQHSK
Trigger: CTTTGAATGCTGATAATGCCAAGCTGTGTTTACAGT...TTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATGGGTGAGACATTGTTaGAATCAATTGAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAWVRHC*NQLRKK
Trigger: CTTTTTCCTCAATTGATTCCAACAATGTCTCACCCA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTCTTCATCAAGAGGTaGTGGAGGAGGAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLFIKR*WRRKVS
Trigger: GGAAACTTTCCTCCTCCACCACCTCTTGATGAAGAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCATACATGCCAAGAACTTaGCTAAGTGCTTTGTATAAA +
Preference number: 4 (lower is better)
Translates to: THCYVFFPLILRQTYGLSYMPRT*LSALYK
Trigger: TTTATACAAAGCACTTAGCCAAGTTCTTGGCATGTA...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTCTAAATATGTAGCCTaGCTAGCTTTCCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFSKYVA*LAFPIF
Trigger: AAAGATGGGGAAAGCTAGCCAGGCTACATATTTAGA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAAATGTGGAAGTCCTTaGGAACAAAGGCCCATCAAG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKKCGSP*EQRPIK
Trigger: CTTGATGGGCCTTTGTTCCCAAGGACTTCCACATTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAAAGCACCTGTGAGTTaGCAGACTCACCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYKAPVS*QTHPGK
Trigger: TTTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAGCACCTGTGAGTTaGCAGACTCACCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKAPVS*QTHPGK
Trigger: TTTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGTATGGCTTGGCAGTTaGCAAGCAAGTGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDVWLGS*QASVSL
Trigger: CAGTGAAACACTTGCTTGCCAACTGCCAAGCCATAC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGTCATCAGCATGGTCTaGCTTCAATTTGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKVISMV*LQFGRQ
Trigger: CTGTCTTCCAAATTGAAGCCAGACCATGCTGATGAC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTAAGACTTGTTTTGTaGAGCTACAGAGCTAGAATA +
Preference number: 4 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLRLVL*SYRARI
Trigger: TATTCTAGCTCTGTAGCTCCACAAAACAAGTCTTAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGAATCCATGATATTTTaGCCAATGCAGAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSESMIF*PMQRVF
Trigger: GAAGACCCTCTGCATTGGCCAAAATATCATGGATTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGTTTGTTCTTATCAGTaGCCTTTTCCCACCAACTTC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSVCSYQ*PFPTNF
Trigger: GAAGTTGGTGGGAAAAGGCCACTGATAAGAACAAAC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAAATGACAGCATCCTaGGAAGCAAAGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKMTAS*EAKSIK
Trigger: TTTGATAGACTTTGCTTCCCAGGATGCTGTCATTTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAAAGCCTGTGTGCGTaGCTCAGGGAAAATTACTAT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKSLCA*LRENYY
Trigger: ATAGTAATTTTCCCTGAGCCACGCACACAGGCTTTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTGGAAAAGAGAATGGTaGCTGACTGCAATGGCATGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYWKREW*LTAMAW
Trigger: CCATGCCATTGCAGTCAGCCACCATTCTCTTTTCCA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATATGGAAAAGAGAATaGTGGCTGACTGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSIWKRE*WLTAMA
Trigger: TGCCATTGCAGTCAGCCACCATTCTCTTTTCCATAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTGAAACAGGATCTGTaGTATAGGTCTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLKQDL*YRSSWD
Trigger: GTCCCAAGAAGACCTATATCACAGATCCTGTTTCAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTGTCTTACCTCTTTCTaGACAATTTTAACCTCACTG +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFCLTSF*TILTSL
Trigger: CAGTGAGGTTAAAATTGTTCAGAAAGAGGTAAGACA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCATGATTACTTACCAGTaGCATACGTTCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFMITYQ*HTFYCC
Trigger: GCAACAATAGAACGTATGTCACTGGTAAGTAATCAT...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAAGGTTAATAGCAGATaGAGAACAGAGACTATCGCG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKKVNSR*RTETIA
Trigger: CGCGATAGTCTCTGTTCTTCATCTGCTATTAACCTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAATGGTGAGAGGCTTTaGGGTTACATCAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYNGERL*GYISVS
Trigger: GGAAACACTGATGTAACCTCAAAGCCTCTCACCATT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACACAAGATGACATGGTaGTGCTTCTCTTTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKHKMTW*CFSFLV
Trigger: TACCAAGAAAGAGAAGCATCACCATGTCATCTTGTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGAATGGAATATGAACTaGCCCAGAAGTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYEWNMN*PRSGNL
Trigger: GAGATTCCCACTTCTGGGTCAGTTCATATTCCATTC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATACTTCCTCACAGTGCTaGTCAGACAGAATACCTAGA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYTSSQC*SDRIPR
Trigger: TCTAGGTATTCTGTCTGATCAGCACTGTGAGGAAGT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACACTTTTCTAGTCTGTaGACGTGCATCTCAACCAAA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKHFSSL*TCISTK
Trigger: TTTGGTTGAGATGCACGTTCACAGACTAGAAAAGTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTATACACCATGGAGGTaGGGCACTTTTCTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYTPWR*GTFLVC
Trigger: ACAGACTAGAAAAGTGCCTCACCTCCATGGTGTATA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGAAGATCACAGATTTaGGTCAGTCTCGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRRSQI*VSLAKR
Trigger: CCTCTTTGCGAGACTGACTCAAATCTGTGATCTTCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTGATGGTATGTTTTTaGAGGCTGCACAGTACGACT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLMVCF*RLHSTT
Trigger: AGTCGTACTGTGCAGCCTTCAAAAACATACCATCAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGCACCTACTCTTTCTaGTGGTATGTTTTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSTYSF*WYVFEG
Trigger: GCCTTCAAAAACATACCATCAGAAAGAGTAGGTGCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATAGCCTGGCCCTGCTaGATAGTAGCCTTCATAATA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDIAWPC*IVAFII
Trigger: TATTATGAAGGCTACTATGCAGCAGGGCCAGGCTAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCCATCTATGGCAGTCTTaGAAATGCAAATCCTACAAT +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFHLWQS*KCKSYN
Trigger: ATTGTAGGATTTGCATTTGCAAGACTGCCATAGATG...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTTATTTCCCAATATTTaGTACTTCTCACGTGGACAC +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFLFPNI*YFSRGH
Trigger: GTGTCCACGTGAGAAGTAGCAAATATTGGGAAATAA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCCACAGTGCTAATATCTaGACTAAAATCCTTGACATC +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFHSANI*TKILDI
Trigger: GATGTCAAGGATTTTAGTGCAGATATTAGCACTGTG...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACTGATGGCAGTTTCTaGTTACAGTGCTCTCTCATT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTDGSF*LQCSLI
Trigger: AATGAGAGAGCACTGTAAGCAGAAACTGCCATCAGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTACTAAGTGAGCATTaGTGTCACCCAAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLLSEH*CHPKRK
Trigger: CTTTCTCTTTGGGTGACAGCAATGCTCACTTAGTAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACAGACTTGGAGAAGGTaGAATCGTTTTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKQTWRR*NRFSQR
Trigger: CCTTTGAGAAAAACGATTGCACCTTCTCCAAGTCTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATATGTTTTTGAAGGCTaGACAGTACGACTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKYVFEG*TVRLWV
Trigger: TACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCTAGGCTATGCTGCTaGTCCATCAACAGTATTGAC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSRLCC*SINSID
Trigger: GTCAATACTGTTGATGGAGCAGCAGCATAGCCTAGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCACTCTAGGCTATGCTaGTGCTCCATCAACAGTATT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYHSRLC*CSINSI
Trigger: AATACTGTTGATGGAGCAGCAGCATAGCCTAGAGTG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTTCTCCTACAATCATaGACTGTCTACCTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLLLQS*TVYLVL
Trigger: TAGGACGAGGTAGACAGTGCATGATTGTAGGAGAAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGAGGTATCTTGCTTTaGCCAAACAGAGGCATATTC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGGILL*PNRGIF
Trigger: GAATATGCCTCTGTTTGGGCAAAGCAAGATACCTCC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGTATTCGTCAGCAGGTaGATTTTCCATGTCATACAG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKVFVSR*IFHVIQ
Trigger: CTGTATGACATGGAAAATCCACCTGCTGACGAATAC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGCTCTAGGCAACAGATaGACAATCGCTTGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYALGNR*TIACLN
Trigger: GTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGCTAAAGCAGGGGTATaGAACATGCTGTCATATTTC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKAKAGV*NMLSYF
Trigger: GAAATATGACAGCATGTTCCATACCCCTGCTTTAGC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGGCCTGAAATATTCATaGTTGCACCATATTAATGCC +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSGLKYS*LHHINA
Trigger: GGCATTAATATGGTGCAACCATGAATATTTCAGGCC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTAAGACTTGTTTTGTaGAGCTACAGAGCTAGAATA +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRALRLVL*SYRARI
Trigger: TATTCTAGCTCTGTAGCTCCACAAAACAAGTCTTAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGAATCCATGATATTTTaGCCAATGCAGAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKESMIF*PMQRVF
Trigger: GAAGACCCTCTGCATTGGCCAAAATATCATGGATTC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACTACAGGTTTTGTGTaGCACCAAAGAGAACATATG +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTTGFV*HQREHM
Trigger: CATATGTTCTCTTTGGTGCCACACAAAACCTGTAGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGACATTGTTAGCTCATaGATCGGCTCTATCGGAAAT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKDIVSS*IGSIGN
Trigger: ATTTCCGATAGAGCCGATCCATGAGCTAACAATGTC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGCTATATTCAGAGCTaGGGAAGTCTTGCCAACTTA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGYIQS*GSLANL
Trigger: TAAGTTGGCAAGACTTCCCCAGCTCTGAATATAGCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCAGTGATGGAACTATaGAAACAAAAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: QEKEHLLAELLRRATSRASVMEL*KQKPSN
Trigger: ATTTGATGGCTTTTGTTTCCATAGTTCCATCACTGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTCCTATTGCCACCTCTaGGTAAGAATGCATCACTCT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYSYCHL*VRMHHS
Trigger: AGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTCCTATTGCCACCTCTaGGTAAGAATGCATCACTCT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSYCHL*VRMHHS
Trigger: AGAGTGATGCATTCTTACCCAGAGGTGGCAATAGGA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATGGATAAAGGTTAAGTaGAGGTATCTTGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKWIKVK*RYLALP
Trigger: GGGCAAAGCAAGATACCTCCACTTAACCTTTATCCA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATATGGAAAAGAGAATaGTGGCTGACTGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIWKRE*WLTAMA
Trigger: TGCCATTGCAGTCAGCCACCATTCTCTTTTCCATAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp TTCATCTACTGTGTGTTTTTGGACTGGTGTGGTCAGTaGACCTGTCATTACATATTCCCATATAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: FIYCVFLDWCGQ*TCHYIFPYRSK
Trigger: TTTGCTCCTATATGGGAATATGTAATGACAGGTCAACTGACCACACCAGTCCAAAAACACACAGTAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448637.5
3UTR CAA 72 bp TATCCTAATACCTCCTACTTCATCTACTGTGTGTTTTaGGACTGGTGTGGTCAGTTGACCTGTCATTACATA +
Preference number: 4 (lower is better)
Translates to: YPNTSYFIYCVF*DWCGQLTCHYI
Trigger: TATGTAATGACAGGTCAACTGACCACACCAGTCCAAAAACACACAGTAGATGAAGTAGGAGGTATTAGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGTGAATAACTTGGCCTaGAATATTCATGGTTGCACC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYVNNLA*NIHGCT
Trigger: GGTGCAACCATGAATATTTCAGGCCAAGTTATTCAC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATATGGACTCCTAAATaGTTAGAGAAAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSIWTPK*LEKEAA
Trigger: AGCAGCTTCTTTCTCTAATCATTTAGGAGTCCATAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTGGAATGACTCTTCCTaGTGTCACATTCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYWNDSS*CHIPSY
Trigger: ATAGGAAGGAATGTGACATCAGGAAGAGTCATTCCA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCGTTTTTCTCAAAGGTaGCGGCACAGAAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRFSQR*RHRKRK
Trigger: TTTTCTCTTTCTGTGCCGTCACCTTTGAGAAAAACG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGGGGATATTGGAAGTaGGTGACTTTCTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRGYWK*VTFFHL
Trigger: CAAATGAAAGAAAGTCACTCACTTCCAATATCCCCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGAGAAGGAATGTGCTaGCACTTTAACACTCTAAAC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGEGMC*HFNTLN
Trigger: GTTTAGAGTGTTAAAGTGTCAGCACATTCCTTCTCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGAGGCATATTCAAGTaGATATGGAGCCAACTGACT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRGIFK*IWSQLT
Trigger: AGTCAGTTGGCTCCATATTCACTTGAATATGCCTCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGTATATCAACTCTCATaGATCTGGACTCAAATACTT +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFVYQLS*IWTQIL
Trigger: AAGTATTTGAGTCCAGATGCATGAGAGTTGATATAC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATGGAGCATAATCTGTaGAAAAATGTGGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSMEHNL*KNVEVL
Trigger: AAGGACTTCCACATTTTTGCACAGATTATGCTCCAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATATAAAGGAATTAGCTaGAGTGTTTCACCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKYKGIS*SVSPLS
Trigger: AGAGAGGGGTGAAACACTGCAGCTAATTCCTTTATA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGTCCATACTGTGCATaGTGGGTTATATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDCPYCA*WVIFWQ
Trigger: CTGCCAAAATATAACCCAGCATGCACAGTATGGACA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACTGATGGCAGTTTCTaGTTACAGTGCTCTCTCATT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTDGSF*LQCSLI
Trigger: AATGAGAGAGCACTGTAAGCAGAAACTGCCATCAGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACAATGTGCTTCCTTCTaGCCATTGTTTGTTCTTATC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKQCASF*PLFVLI
Trigger: GATAAGAACAAACAATGGGCAGAAGGAAGCACATTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTCCAGGGAGGGAAATaGATAAAACACTTATCAGGT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLQGGK*IKHLSG
Trigger: ACCTGATAAGTGTTTTATGCATTTCCCTCCCTGGAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGTAAAATGCAAACTCTaGCCAAATACCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYVKCKL*PNTNSP
Trigger: TGGGGAGTTGGTATTTGGGCAGAGTTTGCATTTTAC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTTAGTTTCAATTTGCTaGCTACAGAGGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLVSIC*LQREDQ
Trigger: TTGGTCCTCCCTCTGTAGGCAGCAAATTGAAACTAA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAGACTTGGAGAAGGTaGAATCGTTTTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQTWRR*NRFSQR
Trigger: CCTTTGAGAAAAACGATTGCACCTTCTCCAAGTCTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTATGTTTTTGAAGGCTaGACAGTACGACTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYYVFEG*TVRLWV
Trigger: TACCCAGAGTCGTACTGTGCAGCCTTCAAAAACATA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAAGTATCACCCTTTTaGCAAAGAGTCAACTGGATT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKVSPF*QRVNWI
Trigger: AATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCATACAGCATCTTTTTaGTCAGGTGCTCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHTASF*SGAQAH
Trigger: ATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGTATTCGTCAGCAGGTaGATTTTCCATGTCATACAG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYVFVSR*IFHVIQ
Trigger: CTGTATGACATGGAAAATCCACCTGCTGACGAATAC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTTCCAAATTCTCAAATaGTTATTCATCCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFFQILK*LFIPIW
Trigger: CCAAATGGGGATGAATAACCATTTGAGAATTTGGAA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTACATGGGAAAAGAATaGCTACTCTTTACAGTCACA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYMGKE*LLFTVT
Trigger: TGTGACTGTAAAGAGTAGCCATTCTTTTCCCATGTA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTAATAAGTATGGCTTaGCAGTTGGCAAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLISMA*QLASKC
Trigger: ACACTTGCTTGCCAACTGCCAAGCCATACTTATTAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTATCCCTCAATAAATTaGACTCTCTGCTTTGTCCTA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYPSIN*TLCFVL
Trigger: TAGGACAAAGCAGAGAGTCCAATTTATTGAGGGATA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGTGAGTCACCACACCTaGCCTTATTTTCGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDVSHHT*PYFRVL
Trigger: TAAAACTCGAAAATAAGGCCAGGTGTGGTGACTCAC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGCGCAACTACATACTaGCCAGGACTAAGAAGATAT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSATTY*PGLRRY
Trigger: ATATCTTCTTAGTCCTGGCCAGTATGTAGTTGCGCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGCAAAGTCTATCAAATaGCAAAGGCCAAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKAKSIK*QRPNLR
Trigger: TCTGAGATTTGGCCTTTGCCATTTGATAGACTTTGC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATCATTTTCCACTCACTaGCCACAATATTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSFSTH*PQYSSS
Trigger: GCTTGATGAATATTGTGGCCAGTGAGTGGAAAATGA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTATTAATCCATTCCTaGGGTGGGAATACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLLIHS*GGNTLS
Trigger: AGACAGAGTATTCCCACCCCAGGAATGGATTAATAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTATTAATCCATTCCTaGGGTGGGAATACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLLIHS*GGNTLS
Trigger: AGACAGAGTATTCCCACCCCAGGAATGGATTAATAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGCTAGAAGGATGGCATaGTCCCATGTTAGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYARRMA*SHVSFN
Trigger: ATTGAAACTAACATGGGACCATGCCATCCTTCTAGC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTATTTTAGGAATACCATaGCTCTGTCAGTATCACACA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSILGIP*LCQYHT
Trigger: TGTGTGATACTGACAGAGCCATGGTATTCCTAAAAT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATTGTTGGAATCAATTaGGGAAAAAGATCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIVGIN*GKRSSL
Trigger: GAGGGAAGATCTTTTTCCTCAATTGATTCCAACAAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGTGTCTCTCCTTAAGTaGAACATGTTCGAACTTAAT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKVSLLK*NMFELN
Trigger: ATTAAGTTCGAACATGTTTCACTTAAGGAGAGACAC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTATGCTGGGACACATaGCTTATTTTTGAGTCGATT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLCWDT*LIFESI
Trigger: AATCGACTCAAAAATAAGTCATGTGTCCCAGCATAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGTAAAGAATCAAGTTaGAGTCTCTGTCCTCATTAT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGKESS*SLCPHY
Trigger: ATAATGAGGACAGAGACTTCAACTTGATTCTTTACC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATACTGAGAACAAGTTTTaGACTTGTCTGGACCACTAT +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYTENKF*TCLDHY
Trigger: ATAGTGGTCCAGACAAGTTCAAAACTTGTTCTCAGT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAATTTCCAGAATCCATaGTATTTTGGCCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKNFQNP*YFGQCR
Trigger: TCTGCATTGGCCAAAATATCATGGATTCTGGAAATT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAAATCAAAACCACTATaGGATACCATCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYKSKPL*DTISHQ
Trigger: CTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACACTCTTGAAATTATaGAACATAGCTGTTCCAACC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTLLKL*NIAVPT
Trigger: GGTTGGAACAGCTATGTTTCATAATTTCAAGAGTGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACAGGGGTATGGAACATaGTGTCATATTTCATTCATA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKQGYGT*CHISFI
Trigger: TATGAATGAAATATGACAGCATGTTCCATACCCCTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGAGATATTTATTCGTaGATCAAGAGACTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRDIYS*IKRLLS
Trigger: TGACAGAAGTCTCTTGATGCACGAATAAATATCTCT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGCCAAGTTGACTGAATaGGATTGTGGCTGTTTAATA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYAKLTE*DCGCLI
Trigger: TATTAAACAGCCACAATCGCATTCAGTCAACTTGGC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACATGTTTCCCTGTTGTaGCTTAAATACTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKHVSLL*LKYSFL
Trigger: GAGAAAAGAGTATTTAAGGCACAACAGGGAAACATG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTTCCTGTCCATACTGTaGATGCTGGGTTATATTTTG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYFLSIL*MLGYIL
Trigger: CAAAATATAACCCAGCATGCACAGTATGGACAGGAA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCAATGTGCTTCCTTCTaGCCATTGTTTGTTCTTATC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYQCASF*PLFVLI
Trigger: GATAAGAACAAACAATGGGCAGAAGGAAGCACATTG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTATATGTTTTTGTGTaGCTTTCCCTAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLYVFV*LSLSQG
Trigger: TCCCTGACTTAGGGAAAGGCACACAAAAACATATAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGCATGCCACCATGTCTaGCTAATTTGGTTTTTATTT +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKACHHV*LIWFLF
Trigger: AAATAAAAACCAAATTAGCCAGACATGGTGGCATGC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGGACTAAGAAGATATaGGATGGTGATTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRTKKI*DGDSSG
Trigger: TCCTGATGAATCACCATCCCATATCTTCTTAGTCCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGGATCTTATTACAGTTaGCCAGAATCAAAGTTACTT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSGSYYS*PESKLL
Trigger: AAGTAACTTTGATTCTGGCCAACTGTAATAAGATCC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACAGATTTAAGTGGTTaGATCTTATTACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTDLSG*ILLQLA
Trigger: GGCCAACTGTAATAAGATCCAACCACTTAAATCTGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAAAATGACAGCATCCTaGGAAGCAAAGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKKMTAS*EAKSIK
Trigger: TTTGATAGACTTTGCTTCCCAGGATGCTGTCATTTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTTCTAGAGCATACATaGAGACTTTCTAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLLEHT*RLSRRF
Trigger: AAACCTCCTAGAAAGTCTCCATGTATGCTCTAGAAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATTTGCTATTTAACTTaGCTCTCATTAGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKICYLT*LSLVPR
Trigger: CCTTGGGACTAATGAGAGCCAAGTTAAATAGCAAAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTGGATTAAGAAAAGGTaGCACATATACACCATGGAG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYWIKKR*HIYTME
Trigger: CTCCATGGTGTATATGTGCCACCTTTTCTTAATCCA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCCAACAATGATAGACTaGATTAAGAAAAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYPTMID*IKKRWH
Trigger: GTGCCACCTTTTCTTAATCCAGTCTATCATTGTTGG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCCAACAATGATAGACTaGATTAAGAAAAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDPTMID*IKKRWH
Trigger: GTGCCACCTTTTCTTAATCCAGTCTATCATTGTTGG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACACTTTTACACTGTTaGTGGGACTGTGAACTAGTT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTLLHC*WDCELV
Trigger: AACTAGTTCACAGTCCCACCAACAGTGTAAAAGTGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTCAGTGATGGAACTATaGAAACAAAAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSVMEL*KQKPSN
Trigger: ATTTGATGGCTTTTGTTTCCATAGTTCCATCACTGA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp AGAGAACTGATTTTAGAAGCTACATTCAGTGCCAAGTaGACTGAATGCGATTGTGGCTGTTTAATAACGTTT +
Preference number: 4 (lower is better)
Translates to: RELILEATFSAK*TECDCGCLITF
Trigger: AAACGTTATTAAACAGCCACAATCGCATTCAGTCAACTTGGCACTGAATGTAGCTTCTAAAATCAGTTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS-3UTR TCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGAAGATATGGGATGGTaGTTCATCAGGAAAATAACA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDEDMGW*FIRKIT
Trigger: TGTTATTTTCCTGATGAATCACCATCCCATATCTTC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTGAATTCTGATGGTTaGAAATTAAATTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLNSDG*KLNLGL
Trigger: CAAGCCCAAATTTAATTTGCAACCATCAGAATTCAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGAGATATTTATTCGTaGATCAAGAGACTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRDIYS*IKRLLS
Trigger: TGACAGAAGTCTCTTGATGCACGAATAAATATCTCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCACACTTATGTTTATTaGGGCACTATTCACAATAGC +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDHTYVY*GTIHNS
Trigger: GCTATTGTGAATAGTGCCGCAATAAACATAAGTGTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGGGTGAGACATTGTTaGAATCAATTGAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDWVRHC*NQLRKK
Trigger: CTTTTTCCTCAATTGATTCCAACAATGTCTCACCCA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTATCCCTCAATAAATTaGACTCTCTGCTTTGTCCTA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYPSIN*TLCFVL
Trigger: TAGGACAAAGCAGAGAGTCCAATTTATTGAGGGATA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTTAAAAAGGCAGACTTaGAGAAGGTGCAATCGTTTT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLKRQT*RRCNRF
Trigger: AAAACGATTGCACCTTCTCCAAGTCTGCCTTTTTAA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATATTTTAGGAATACCATaGCTCTGTCAGTATCACACA +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYILGIP*LCQYHT
Trigger: TGTGTGATACTGACAGAGCCATGGTATTCCTAAAAT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTGAATTCTGATGGTTaGAAATTAAATTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLNSDG*KLNLGL
Trigger: CAAGCCCAAATTTAATTTGCAACCATCAGAATTCAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTATTTTGATATGTTCTaGAGAGCCCATGATATAGTG +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYFDMF*RAHDIV
Trigger: CACTATATCATGGGCTCTGCAGAACATATCAAAATA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGTATGTTACATAAATaGCCACCAGAGTTAAATGAA +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGMLHK*PPELNE
Trigger: TTCATTTAACTCTGGTGGGCATTTATGTAACATACC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR GCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGATATATCATAACCTaGTCAAGCTACTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRYIIT*SSYSPI
Trigger: AATAGGAGAGTAGCTTGAGCAGGTTATGATATATCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CCA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGATCTTATTACAGTTaGCCAGAATCAAAGTTACTT +
Preference number: 4 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGSYYS*PESKLL
Trigger: AAGTAACTTTGATTCTGGCCAACTGTAATAAGATCC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp CATTCCTTCCTATTGAGTAAGTACAGATTTAAGTGGTaGGATCTTATTACAGTTGGCCAGAATCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: HSFLLSKYRFKW*DLITVGQNQSY
Trigger: GTAACTTTGATTCTGGCCAACTGTAATAAGATCCAACCACTTAAATCTGTACTTACTCAATAGGAAGGAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp TTAATAGAGCCTATATTTAGTGCTCATCTTCTCACTTaGCTGATGTGTATGCTGAACAGAAGATCACAGATT +
Preference number: 4 (lower is better)
Translates to: LIEPIFSAHLLT*LMCMLNRRSQI
Trigger: AATCTGTGATCTTCTGTTCAGCATACACATCAGCAAAGTGAGAAGATGAGCACTAAATATAGGCTCTATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
3UTR CAA 72 bp TTAATAGCAGATGAAGAACAGAGACTATCGCGTAGTTaGATGGCCTTTACTCTAGTATTTCTTATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LIADEEQRLSRS*MAFTLVFLIFF
Trigger: GAAAAAGATAAGAAATACTAGAGTAAAGGCCATCAAACTACGCGATAGTCTCTGTTCTTCATCTGCTATTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.4
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAATCTTGCAGCGCCCGGCTGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: HMAEGLTSAFGWQPR*VRHCWNLAAPGCLP
Trigger: CGGGAGACAGCCGGGCGCTGCAAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416784.5
CDS GCA 90 bp GAGGCCGAGGCTTATAGGGGGAGCTGCACTCAAGGTCAGCCAAGATaGTGGTCAAGGAGTCAATCTCAGCGTCCAGGCTGGAGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: EAEAYRGSCTQGQPR*WSRSQSQRPGWSAS
Trigger: AGAGGCGCTCCAGCCTGGACGCTGAGATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp AGCCTGGCCCTGCTGCATAGTAGCCTTCATAATAGCGTCCCTGGTTaGGGGCATACCCATACCCAGGCTCCGGCTGAAGTCCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SLALLHSSLHNSVPG*GHTHTQAPAEVLVV
Trigger: CACCACCAGGACTTCAGCCGGAGCCTGGGTATGGGTATGCCCCCAACCAGGGACGCTATTATGAAGGCTACTATGCAGCAGGGCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATCTTGCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: HPCRHMAEGLTSAFG*QPRWVRHCWNLAAP
Trigger: GGGCGCTGCAAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416784.5
CDS CCA 90 bp GCCGAGGCTTATAGGGGGAGCTGCACTCAAGGTCAGCCAAGATGCTaGTCAAGGAGTCAATCTCAGCGTCCAGGCTGGAGCGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: AEAYRGSCTQGQPRC*SRSQSQRPGWSASP
Trigger: AGGAGAGGCGCTCCAGCCTGGACGCTGAGATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 90 bp GGGTGGTCTCCATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTaGTTTTGGGTGGCAGCCAAGATGGGTGAGACATTGTTGGAATCA +
Preference number: 5 (lower is better)
Translates to: GWSPSVQAHGRGAHQ*FWVAAKMGETLLES
Trigger: TGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414139.5
ENST00000443217.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 90 bp GGGTGGTCTCCATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTaGTTTTGGGTGGCAGCCAAGATGGGTGAGACATTGTTGGAATAC +
Preference number: 5 (lower is better)
Translates to: GWSPSVQAHGRGAHQ*FWVAAKMGETLLEY
Trigger: GTATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420410.5
CDS GCA 90 bp GGGTGGTCTCCATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTaGTTTTGGGTGGCAGCCAAGATGGGTGAGACATTGTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: GWSPSVQAHGRGAHQ*FWVAAKMGETLLES
Trigger: AGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416784.5
ENST00000426274.5
ENST00000430340.5
ENST00000448637.5
ENST00000454789.5
ENST00000457242.1
ENST00000617246.5
CDS CCA 90 bp GGTGGCTGTTGTGTAGACACTGAAATGCTGGGGTTCCCAAAGGAATaGGTGGTCTCCATCCGTGCAGGCACATGGCCGAGGGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: GGCCVDTEMLGFPKE*VVSIRAGTWPRGSP
Trigger: TGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCCATTCCTTTGGGAACCCCAGCATTTCAGTGTCTACACAACAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000414139.5
ENST00000416784.5
ENST00000420410.5
ENST00000426274.5
ENST00000430340.5
ENST00000443217.5
ENST00000448637.5
ENST00000454789.5
ENST00000457242.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp TCCCTCTTGCAGGCCCTCAGTCCACTACGGGACACAGCAAGGCGGTaGTCTCGAAGCCTGAAGGGAACAGAACTGAGACATTCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: SLLQALSPLRDTARR*SRSLKGTELRHSRL
Trigger: GAGGCGAGAATGTCTCAGTTCTGTTCCCTTCAGGCTTCGAGACCACCGCCTTGCTGTGTCCCGTAGTGGACTGAGGGCCTGCAAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420410.5
CDS CCA 90 bp GGTCAGCCAAGATGCTGGTCAAGGAGTCAATCTCAGCGTCCAGGCTaGAGCGCCTCTCCTCAAGTGTCTTGCCTCCGGGATTCCCCTGTA +
Preference number: 5 (lower is better)
Translates to: GQPRCWSRSQSQRPG*SASPQVSCLRDSPV
Trigger: TACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAGATTGACTCCTTGACCAGCATCTTGGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCCTGAATGGCCACCCTTaGGCTGCAATGGTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGLNGHP*AAMVAH
Trigger: GTGCGCCACCATTGCAGCCAAAGGGTGGCCATTCAG...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS CCA 90 bp CATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATACGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: HPCRHMAEGLTSAFG*QPRWVRHCWNTMSS
Trigger: GCTGGACATCGTATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420410.5
CDS GCA 90 bp CTTGGGACCAGTGACTGGATACATCCCAGGAGGGTTCTGGTTCCCTaGTCCAGGAGGAGTGTACCCTGGTTCCCGTTTCCAGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: LGTSDWIHPRRVLVP*SRRSVPWFPFPGIW
Trigger: CCAAATACCTGGAAACGGGAACCAGGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGATGTATCCAGTCACTGGTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGCTGAGGCAGGAGAATaGCTCAAAATCCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGAEAGE*LKIRRW
Trigger: CCACCTCCGGATTTTGAGCAATTCTCCTGCCTCAGC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS GCA 90 bp ATAGGTAGGGTCAGAGTCATTTCTGCCCCCATAGCCTGGCCCTGCTaGATAGTAGCCTTCATAATAGCGTCCCTGGTTGGGGGCATACCC +
Preference number: 5 (lower is better)
Translates to: IGRVRVISAPIAWPC*IVAFIIASLVGGIP
Trigger: GGGTATGCCCCCAACCAGGGACGCTATTATGAAGGCTACTATGCAGCAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACCCTACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 90 bp TTGAACCAGTGGAGCTCTGTGGAGGCCGAGGCTTATAGGGGGAGCTaGACTCAAGGTCAGCCAAGATGCTGGTCAAGGAGTCAATCTCAG +
Preference number: 5 (lower is better)
Translates to: LNQWSSVEAEAYRGS*TQGQPRCWSRSQSQ
Trigger: CTGAGATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CATCCCAGGAGGGTTCTGGTTCCCTGCTCCAGGAGGAGTGTACCCTaGTTCCCGTTTCCAGGTATTTGGGTGACCTTGTTGACCATAGGT +
Preference number: 5 (lower is better)
Translates to: HPRRVLVPCSRRSVP*FPFPGIWVTLLTIG
Trigger: ACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATCTTGAGATGAGA +
Preference number: 5 (lower is better)
Translates to: HPCRHMAEGLTSAFG*QPRWVRHCWNLEMR
Trigger: TCTCATCTCAAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457242.1
CDS-3UTR CAA 90 bp CTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCCATGCCTCCCCGTGTaGAAGGAGGTGGACACTGCC +
Preference number: 5 (lower is better)
Translates to: LSWARDTTQGECKVEGLQPCLPV*KEVDTA
Trigger: GGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGG...CTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CAA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGGGATGACCATTCTCTaGTGTCCTGTGACTGGGGTC +
Preference number: 5 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPGMTIL*CPVTGV
Trigger: GACCCCAGTCACAGGACACAAGAGAATGGTCATCCC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGCCTTTAGCCGGACATaGACAGCCTTCCCTAGATTG +
Preference number: 5 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGAFSRT*TAFPRL
Trigger: CAATCTAGGGAAGGCTGTCAATGTCCGGCTAAAGGC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS TCA 90 bp AAGTCCTGGTGGTGGAATGTAGGCATAATCCATGCCTCCCCGTGTTaGAGGAGGTGGACACTGCCCAGAGACAGGAACTGGCTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: KSWWWNVGIIHASPC*RRWTLPRDRNWLSV
Trigger: AACACTCAGCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGGATTATGCCTACATTCCACCACCAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000487347.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CCCTGCTCCAGGAGGAGTGTACCCTGGTTCCCGTTTCCAGGTATTTaGGTGACCTTGTTGACCATAGGTAGGGTCAGAGTCATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PCSRRSVPWFPFPGI*VTLLTIGRVRVISA
Trigger: GGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGGTACACTCCTCCTGGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATCAATTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: HPCRHMAEGLTSAFG*QPRWVRHCWNQLRK
Trigger: TTTCCTCAATTGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414139.5
ENST00000443217.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAATCTTGAGATGAGATCCTCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: HMAEGLTSAFGWQPR*VRHCWNLEMRSSEG
Trigger: CCCTTCAGAGGATCTCATCTCAAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457242.1
CDS-3UTR CAA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCACCGGGGCAAACTTTTaGGGTGGCTGTTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPTGANF*GGCCVD
Trigger: GTCTACACAACAGCCACCCAAAAAGTTTGCCCCGGT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCACATCTGTGACTCTCTaGTCCTTCCTAGGAACCCGT +
Preference number: 5 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGTSVTL*SFLGTR
Trigger: ACGGGTTCCTAGGAAGGACAAGAGAGTCACAGATGT...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS CCA 90 bp TTGTTGACCATAGGTAGGGTCAGAGTCATTTCTGCCCCCATAGCCTaGCCCTGCTGCATAGTAGCCTTCATAATAGCGTCCCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: LLTIGRVRVISAPIA*PCCIVAFIIASLVG
Trigger: CCCAACCAGGGACGCTATTATGAAGGCTACTATGCAGCAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACCCTACCTATGGTCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp GGTGAGACATTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGCTTGCAGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: GETLLESQIAGSWNG*LTQGSANCNACSAR
Trigger: CCGGGCGCTGCAAGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454789.5
CDS-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACCATGCCTCCCCGTGTaGAAGGAGGTGGACACTGCC +
Preference number: 5 (lower is better)
Translates to: THCYVFFPLILRQTYGLSPCLPV*KEVDTA
Trigger: GGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS CCA 90 bp GCCTCCGGGATTCCCCTGTACTTTGAAAGCCTCTTCATCAAGAGGTaGTGGAGGAGGAAAGTTTCCAGAGATAGATGGAAGGGCACTGGA +
Preference number: 5 (lower is better)
Translates to: ASGIPLYFESLFIKR*WRRKVSRDRWKGTG
Trigger: TCCAGTGCCCTTCCATCTATCTCTGGAAACTTTCCTCCTCCACCACCTCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCCCGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000416784.5
ENST00000420410.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGCTCACCAGTGCTTTaGGGTGGCAGCCAAGATGGG +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGSPVL*GGSQDG
Trigger: CCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCACCCTCACCTCCAGGTaGTTTGTATGGGTTGTACTT +
Preference number: 5 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPTLTSR*FVWVVL
Trigger: AAGTACAACCCATACAAACAACCTGGAGGTGAGGGT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCCTGGTCTCCAACAGATaGGGAGGAAAATGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPLVSNR*GGKWSS
Trigger: AGAAGACCATTTTCCTCCCAATCTGTTGGAGACCAG...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACGTGATCGGCCCGCCTaGGCCTCCCAAAGCATGATT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRDRPA*ASQSMI
Trigger: AATCATGCTTTGGGAGGCCAAGGCGGGCCGATCACG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS GCA 90 bp GGTCCAGCAGTCTCTCCATCATCCCAGGTCACAGATGTATCCATCTaGCAGCTCCATGAACTACAGGACAGCAATACCAGAGATCTAGGT +
Preference number: 5 (lower is better)
Translates to: GPAVSPSSQVTDVSI*QLHELQDSNTRDLG
Trigger: ACCTAGATCTCTGGTATTGCTGTCCTGTAGTTCATGGAGCTGGCAGATGGATACATCTGTGACCTGGGATGATGGAGAGACTGCTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457242.1
CDS CCA 90 bp GGCTGTGGTTTCAATGTAGACTTCTTGGTTGCTGTTAGAGGGGGTTaGTTCGGGATGACCATTCTCTTGTGTCCTGTGACTGGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: GCGFNVDFLVAVRGG*FGMTILLCPVTGVE
Trigger: TTCGACCCCAGTCACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGCAACCAAGAAGTCTACATTGAAACCACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000448637.5
ENST00000462758.1
ENST00000471917.1
ENST00000487347.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTTGAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAACTGAATGGCCACCCTTaGGCTGCAATGGTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: FEVLSWARDTTQGECKVELNGHP*AAMVAH
Trigger: GTGCGCCACCATTGCAGCCAAAGGGTGGCCATTCAG...TTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTGGAGGAGAGGCTGTaGAACCAGTGGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLEERL*NQWSSV
Trigger: CACAGAGCTCCACTGGTTCAACAGCCTCTCCTCCAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCATCTACTGTGTGTTTTaGGACTGGTGTGGTCAGTTG +
Preference number: 5 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPIYCVF*DWCGQL
Trigger: CAACTGACCACACCAGTCCAAAAACACACAGTAGAT...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGAGCATGGGAGAACCTaGAGTATTGTATTGAGCATA +
Preference number: 5 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGEHGRT*SIVLSI
Trigger: TATGCTCAATACAATACTCAAGGTTCTCCCATGCTC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGGCTCACCAGTGCTTTaGGGTGGCAGCCAAGATGGG +
Preference number: 5 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFGSPVL*GGSQDG
Trigger: CCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp CCGCTCATCCTCAGGCAGACTTATGGACTCTCACATAGCAGCTCAGTCACACCCGGTTGTTTGTATGGGTaGTACTTAGGTTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: PLILRQTYGLSHSSSVTPGCLYG*YLGFGA
Trigger: TGCTCCAAAACCTAAGTACAACCCATACAAACAACC...GGGTGTGACTGAGCTGCTATGTGAGAGTCCATAAGTCTGCCTGAGGATGAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCTCTCCTCAAGTGTCTaGCCTCCGGGATTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: STTENVKGTGLKGSDSSALSSSV*PPGFPC
Trigger: ACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTCTCCTCAAGTGTCTaGCCTCCGGGATTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRALSSSV*PPGFPC
Trigger: ACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCGAGCTTGGACAGTTCTaGAAGGGAAAGGTAATAATT +
Preference number: 5 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGELGQF*KGKVII
Trigger: AATTATTACCTTTCCCTTCAAGAACTGTCCAAGCTC...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GTGAGGTGGGAAATGGGGCTCAGGCAGATGGGTGACATGCCAGTATTGCTTGGCCTTTTCACTAGTCCTTaGCCTCTTGATTTCATCTTG +
Preference number: 5 (lower is better)
Translates to: VRWEMGLRQMGDMPVLLGLFTSP*PLDFIL
Trigger: CAAGATGAAATCAAGAGGCAAAGGACTAGTGAAAAG...GCCAAGCAATACTGGCATGTCACCCATCTGCCTGAGCCCCATTTCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACGCTCCATGATGGGCTaGGAACACACATTGCACTGC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRSMMG*EHTLHC
Trigger: GCAGTGCAATGTGTGTTCCAAGCCCATCATGGAGCG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGGCATAATAGGCTCCTaGCACACAGAACATCGCGGG +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFGIIGS*HTEHRG
Trigger: CCCGCGATGTTCTGTGTGCAAGGAGCCTATTATGCC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS TCA 90 bp TTATCTTTTTCTTGTGTTCGTTCTTCTCAGTGCCGGCTGAACAGGTaGCTGAATCTAAAGGTCAGTGCTCGCCTTGGCGGTCAACACCCT +
Preference number: 5 (lower is better)
Translates to: LSFSCVRSSQCRLNR*LNLKVSARLGGQHP
Trigger: AGGGTGTTGACCGCCAAGGCGAGCACTGACCTTTAGATTCAGTCACCTGTTCAGCCGGCACTGAGAAGAACGAACACAAGAAAAAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 90 bp CACATTGCACTGCTCCAGAGTATTAATGTAGCAGGGCTCGCAGTATaGTTTCTTTTCCACAGCATAGAATGGCTGCCCTCGGAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: HIALLQSINVAGLAV*FLFHSIEWLPSELV
Trigger: AACAAGCTCCGAGGGCAGCCATTCTATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGCTACATTAATACTCTGGAGCAGTGCAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000459897.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp GGTGAGACATTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGCAGGTCTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: GETLLESQIAGSWNG*LTQGSANCNAGLAE
Trigger: TTCAGCAAGACCTGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTCACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426274.5
CDS CCA 90 bp GGTGAGACATTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGAAGGTGTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GETLLESQIAGSWNG*LTQGSANCNEGVRA
Trigger: AGCTCTGACACCTTCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTCACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp TTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCCCCGTTTCCAGGTATTaGGGTGACCTTGTTGACCAT +
Preference number: 5 (lower is better)
Translates to: FCLGQEIPHRESAKLKVFPVSRY*GDLVDH
Trigger: ATGGTCAACAAGGTCACCCAAATACCTGGAAACGGG...GAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCTGAATGGCCACCCTTaGGCTGCAATGGTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLNGHP*AAMVAH
Trigger: GTGCGCCACCATTGCAGCCAAAGGGTGGCCATTCAG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCCTGGAGGAGAGGCTGTaGAACCAGTGGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFLEERL*NQWSSV
Trigger: CACAGAGCTCCACTGGTTCAACAGCCTCTCCTCCAG...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGGATGACCATTCTCTaGTGTCCTGTGACTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGMTIL*CPVTGV
Trigger: GACCCCAGTCACAGGACACAAGAGAATGGTCATCCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACGCTCCATGATGGGCTaGGAACACACATTGCACTGC +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRARSMMG*EHTLHC
Trigger: GCAGTGCAATGTGTGTTCCAAGCCCATCATGGAGCG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACGCGGGGCAAATTTCTaGTGGAAGTCCTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVRGANF*WKSSMQ
Trigger: CTGCATTGAGGACTTCCACAAGAAATTTGCCCCGCG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACAAGGGGTAGCAGCCTaGGTTATCTCCTTCAGACAG +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVQGVAA*VISFRQ
Trigger: CTGTCTGAAGGAGATAACCAAGGCTGCTACCCCTTG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCAGCCGACACAGATTaGACAAGAGAAGCCCAAACC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVAADTD*TREAQT
Trigger: GGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCGTGATCGGCCCGCCTaGGCCTCCCAAAGCATGATT +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRDRPA*ASQSMI
Trigger: AATCATGCTTTGGGAGGCCAAGGCGGGCCGATCACG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTGGATGACTGGGGGCTaGGTAGTCTGTAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFWMTGG*VVCKKS
Trigger: CGACTTCTTACAGACTACCAAGCCCCCAGTCATCCA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS TCA 90 bp TCTCCACAGCGAGCACAGCGGCCCCATGGTTCTAGTTCTGTCTTCTaGGACCTTATCTCTCTCTTGGACTTGACATCCTTTAATACATCA +
Preference number: 5 (lower is better)
Translates to: SPQRAQRPHGSSSVF*DLISLLDLTSFNTS
Trigger: TGATGTATTAAAGGATGTCAAGTCCAAGAGAGAGATAAGGTCTCAGAAGACAGAACTAGAACCATGGGGCCGCTGTGCTCGCTGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS CCA 90 bp AATGTAGCAGGGCTCGCAGTATGCTTTCTTTTCCACAGCATAGAATaGCTGCCCTCGGAGCTTGTTGTTGCAGATGATGCAGGTAAAACA +
Preference number: 5 (lower is better)
Translates to: NVAGLAVCFLFHSIE*LPSELVVADDAGKT
Trigger: TGTTTTACCTGCATCATCTGCAACAACAAGCTCCGAGGGCAGCCATTCTATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGCTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000459897.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCCATGCCTCCCCGTGTaGAAGGAGGTGGACACTGCC +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDPCLPV*KEVDTA
Trigger: GGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCCATGCCTCCCCGTGTaGAAGGAGGTGGACACTGCC +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYPCLPV*KEVDTA
Trigger: GGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATGGTATTTGGGTGACCTaGTTGACCATAGGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: GQEIPHRESAKLKVFSKNGIWVT*LTIGRV
Trigger: GACCCTACCTATGGTCAACAAGGTCACCCAAATACC...ATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGTATTTGGGTGACCTaGTTGACCATAGGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGIWVT*LTIGRV
Trigger: GACCCTACCTATGGTCAACAAGGTCACCCAAATACC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCACCCGTTTCCAGGTATTaGGGTGACCTTGTTGACCAT +
Preference number: 5 (lower is better)
Translates to: THCYVFFPLILRQTYGLSPVSRY*GDLVDH
Trigger: ATGGTCAACAAGGTCACCCAAATACCTGGAAACGGG...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGGTCAGTGCTCGCCTaGGCGGTCAACACCCTGATG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRSVLA*AVNTLM
Trigger: CATCAGGGTGTTGACCGCCAAGGCGAGCACTGACCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAAAAGCACCTGTGAGTaGGCAGACTCACCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFKSTCE*ADSPRK
Trigger: TTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTTT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTATCGGAAATGCCTGTaGCAGCAACATGCACGTGGT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFYRKCL*QQHARG
Trigger: ACCACGTGCATGTTGCTGCAACAGGCATTTCCGATA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTTCACGGTAGCCGCTaGAGAGGGGATATTGGAAGT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFFHGSR*RGDIGS
Trigger: ACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATGGACCCTCTCCTATaGCCACCTCTGGGTAAGAAT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVMDPLL*PPLGKN
Trigger: ATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGGAAAGGGAACGACTaGGCAAGTGTAATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFRKGND*ASVICQ
Trigger: CTGGCAGATTACACTTGCCAAGTCGTTCCCTTTCCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS TCA 90 bp GCTTTTGGGTGGCAGCCAAGATGGGTGAGACATTGTTGGAATCTGTaGGTAAGAACATGCGGTCTTTGGTTTTCTGTCCTTGCGATAGTT +
Preference number: 5 (lower is better)
Translates to: AFGWQPRWVRHCWNL*VRTCGLWFSVLAIV
Trigger: AACTATCGCAAGGACAGAAAACCAAAGACCGCATGTTCTTACTCACAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430340.5
CDS GCA 90 bp AGTGGAGCTCAGTCTATCTTTCTCATTGTAGTTTTACCTCTCAGTTaGTGGACAGAGGTCTTACATGCTTGCATCCCTATCGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SGAQSIFLIVVLPLS*WTEVLHACIPIVEP
Trigger: AGGCTCCACGATAGGGATGCAAGCATGTAAGACCTCTGTCCAGCAACTGAGAGGTAAAACTACAATGAGAAAGATAGACTGAGCTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462758.1
CDS GCA 90 bp TTGAACACCACTCTGACACCATCTCCTTTGAGGTTGATTCCACTTTaGTGGTGTTACCAGCCAACATCCTGTTTAGCTGCTTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: LNTTLTPSPLRLIPL*WCYQPTSCLAAFLC
Trigger: ACAGAGGAAAGCAGCTAAACAGGATGTTGGCTGGTAACACCAGCAAAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGTGGTGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS CCA 90 bp GGAGCTCAGTCTATCTTTCTCATTGTAGTTTTACCTCTCAGTTGCTaGACAGAGGTCTTACATGCTTGCATCCCTATCGTGGAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: GAQSIFLIVVLPLSC*TEVLHACIPIVEPE
Trigger: TTCAGGCTCCACGATAGGGATGCAAGCATGTAAGACCTCTGTCCAGCAACTGAGAGGTAAAACTACAATGAGAAAGATAGACTGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462758.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTGAATGGCCACCCTTaGGCTGCAATGGTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLNGHP*AAMVAH
Trigger: GTGCGCCACCATTGCAGCCAAAGGGTGGCCATTCAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTTCATACAGCATCTTTTaGGTCAGGTGCTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: VLSWARDTTQGECKVEGLSYSIF*VRCSSS
Trigger: TGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGA...AAGACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGCTCACCAGTGCTTTaGGGTGGCAGCCAAGATGGG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGSPVL*GGSQDG
Trigger: CCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAACCCTCACCTCCAGGTaGTTTGTATGGGTTGTACTT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVTLTSR*FVWVVL
Trigger: AAGTACAACCCATACAAACAACCTGGAGGTGAGGGT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACCTCGGAGCTTGTTGTaGCAGATGATGCAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVPRSLL*QMMQVK
Trigger: TTTTACCTGCATCATCTGCAACAACAAGCTCCGAGG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGCTGCCCTCGGAGCTaGTTGTTGCAGATGATGCAG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGCPRS*LLQMMQ
Trigger: CTGCATCATCTGCAACAACAAGCTCCGAGGGCAGCC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTGATGCGGGCAGAGTaGCAGGTCTTGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLMRAE*QVLQRM
Trigger: CATCCTCTGCAAGACCTGCAACTCTGCCCGCATCAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGGTCAGTGCTCGCCTaGGCGGTCAACACCCTGATG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRSVLA*AVNTLM
Trigger: CATCAGGGTGTTGACCGCCAAGGCGAGCACTGACCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGGTGTCTTTTTCAGTTaGCTGGTTTCCCACAGATGG +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFGVFFS*LVSHRW
Trigger: CCATCTGTGGGAAACCAGCAAACTGAAAAAGACACC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCCCAAGAAATGGACTaGAGGCACATTTTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSQEMD*RHILQR
Trigger: CCTCTGCAAAATGTGCCTCAAGTCCATTTCTTGGGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGAGACAGCACTGGACTaGCAAGACCTGGTTATATCC +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAETALD*QDLVIS
Trigger: GGATATAACCAGGTCTTGCAAGTCCAGTGCTGTCTC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATTTCACGGTAGCCGCTaGAGAGGGGATATTGGAAGT +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAFHGSR*RGDIGS
Trigger: ACTTCCAATATCCCCTCTCAAGCGGCTACCGTGAAA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS TCA 90 bp ACCAGAGATCTAGGTGCTCAAGTCCCATCTCTATTTCTTGCTCTCTaGGACCTTGAGCAACTCATTTTACTTCTCTGGGCCTCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TRDLGAQVPSLFLAL*DLEQLILLLWASVS
Trigger: AGAAACTGAGGCCCAGAGAAGTAAAATGAGTTGCTCAAGGTCTCAGAGAGCAAGAAATAGAGATGGGACTTGAGCACCTAGATCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457242.1
CDS CCA 90 bp GGTGAGACATTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGCAATTGAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: GETLLESQIAGSWNG*LTQGSANCNAIEEK
Trigger: TTTTTCCTCAATTGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617246.5
CDS-3UTR CAA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCGGTATTTGGGTGACCTaGTTGACCATAGGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFGIWVT*LTIGRV
Trigger: GACCCTACCTATGGTCAACAAGGTCACCCAAATACC...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATCATACAGCATCTTTTaGGTCAGGTGCTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVSYSIF*VRCSSS
Trigger: TGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCATCACCTCCAGGTTGTTaGTATGGGTTGTACTTAGGT +
Preference number: 5 (lower is better)
Translates to: THCYVFFPLILRQTYGLSSPPGC*YGLYLG
Trigger: ACCTAAGTACAACCCATACAAACAACCTGGAGGTGA...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTCACCTCCAGGTTGTTaGTATGGGTTGTACTTAGGT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFSPPGC*YGLYLG
Trigger: ACCTAAGTACAACCCATACAAACAACCTGGAGGTGA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACCCTCACCTCCAGGTaGTTTGTATGGGTTGTACTT +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRATLTSR*FVWVVL
Trigger: AAGTACAACCCATACAAACAACCTGGAGGTGAGGGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGGATTCCCCTGTACTTaGAAAGCCTCTTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFGFPCT*KASSSR
Trigger: TCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTCTCCTCAAGTGTCTaGCCTCCGGGATTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLSSSV*PPGFPC
Trigger: ACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGATGGGTGAGACATTGTaGGAATCTCAGATAGCTGGC +
Preference number: 5 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWMGETL*ESQIAG
Trigger: GCCAGCTATCTGAGATTCCAACAATGTCTCACCCAT...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCTGGAGGAGAGGCTGTaGAACCAGTGGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDLEERL*NQWSSV
Trigger: CACAGAGCTCCACTGGTTCAACAGCCTCTCCTCCAG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACAGCCTTCCCTAGATaGGTCCTAACCTACTACTTG +
Preference number: 5 (lower is better)
Translates to: STTENVKGTGLKGSDSSATAFPR*VLTYYL
Trigger: CAAGTAGTAGGTTAGGACCAATCTAGGGAAGGCTGT...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCGCTTGGCAATGCTATTaGCAGTCCAGAATAGGCCAA +
Preference number: 5 (lower is better)
Translates to: STTENVKGTGLKGSDSSAAWQCY*QSRIGQ
Trigger: TTGGCCTATTCTGGACTGCAAATAGCATTGCCAAGC...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGCCCTCGGAGCTTGTaGTTGCAGATGATGCAGGTA +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSCPRSL*LQMMQV
Trigger: TACCTGCATCATCTGCAACAACAAGCTCCGAGGGCA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGCTGCCCTCGGAGCTaGTTGTTGCAGATGATGCAG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGCPRS*LLQMMQ
Trigger: CTGCATCATCTGCAACAACAAGCTCCGAGGGCAGCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCGCGGGGCAAATTTCTaGTGGAAGTCCTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSRGANF*WKSSMQ
Trigger: CTGCATTGAGGACTTCCACAAGAAATTTGCCCCGCG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCTGATGCGGGCAGAGTaGCAGGTCTTGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLMRAE*QVLQRM
Trigger: CATCCTCTGCAAGACCTGCAACTCTGCCCGCATCAG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAATAGTCAGTGCTACTaGAGGTCATCAGCATGGTCT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVNSQCY*RSSAWS
Trigger: AGACCATGCTGATGACCTCAAGTAGCACTGACTATT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACATTCAGTGCCAAGTaGACTGAATGCGATTGTGGC +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRATFSAK*TECDCG
Trigger: GCCACAATCGCATTCAGTCAACTTGGCACTGAATGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACATGTACTACAGGTTTaGTGTGGCACCAAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVHVLQV*CGTKEN
Trigger: GTTCTCTTTGGTGCCACACAAAACCTGTAGTACATG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACGGGGTTTCACCATGTaGACCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRGFTM*TRMVSI
Trigger: GATCGAGACCATCCTGGTCAACATGGTGAAACCCCG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAAGTCACTTAATGGCTaGAGCCTCAGCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFKSLNG*SLSFLF
Trigger: GAAGAGAAAGCTGAGGCTCAAGCCATTAAGTGACTT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGCTATGTCACAGCTTTaGGCAAGTCACTTAATGGCT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFAMSQL*ASHLMA
Trigger: AGCCATTAAGTGACTTGCCAAAAGCTGTGACATAGC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATGTGAGCGTGGCTACTaGGAGACAGCACTGGACTTG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKCERGY*ETALDL
Trigger: CAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAGTACACATGTGGATTaGCCACCTGGCAGTCAATTG +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRASTHVD*PPGSQL
Trigger: CAATTGACTGCCAGGTGGCAAATCCACATGTGTACT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCCTTCTGCCCATTGTTaGTTCTTATCAGTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFPSAHC*FLSVAF
Trigger: AAAGGCCACTGATAAGAACAAACAATGGGCAGAAGG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACCTTCTGCCCATTGTTaGTTCTTATCAGTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVPSAHC*FLSVAF
Trigger: AAAGGCCACTGATAAGAACAAACAATGGGCAGAAGG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACTCTGGGGAAATTTATaGCAATGTGCTTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLWGNL*QCASFC
Trigger: GCAGAAGGAAGCACATTGCAATAAATTTCCCCAGAG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACAAGAGAAGGAACACTaGCTTGCTGAACTGTTACGT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVQEKEH*LAELLR
Trigger: ACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGGGGTGAGAAGTCATTaGCTATTTAACTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVGVRSH*LFNLAL
Trigger: GAGAGCCAAGTTAAATAGCAAATGACTTCTCACCCC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCATGTTAGTTTCAATTaGCTGCCTACAGAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFHVSFN*LPTEGG
Trigger: TCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS TCA 90 bp CTCGTTGTTCATGCAGTATTCTGCGAAGCTCCAGCATTCTTAAATTaGTTAATGTGGCATCTGGCCTATTCCCAGTTCTGTGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: LVVHAVFCEAPAFLN*LMWHLAYSQFCASG
Trigger: TCCTGATGCACAGAACTGGGAATAGGCCAGATGCCACATTAATCAATTTAAGAATGCTGGAGCTTCGCAGAATACTGCATGAACAACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS-3UTR CAA 90 bp GAAGTTCTGTCTTGGGCAAGAGATACCACACAGGGAGAGTGCAAAGTTGAAGGTGACTGTAAACACAGCTaGGCATTATCAGCATTCAAA +
Preference number: 5 (lower is better)
Translates to: EVLSWARDTTQGECKVEGDCKHS*ALSAFK
Trigger: TTTGAATGCTGATAATGCCAAGCTGTGTTTACAGTC...ACCTTCAACTTTGCACTCTCCCTGTGTGGTATCTCTTGCCCAAGACAGAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CAA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCGGATTCCCCTGTACTTaGAAAGCCTCTTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: STTENVKGTGLKGSDSSAGFPCT*KASSSR
Trigger: TCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCC...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGGATTCCCCTGTACTTaGAAAGCCTCTTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAGFPCT*KASSSR
Trigger: TCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TGCGGGGATGTATATCAACTCTCATGCATCTGGACTCAAATACTTTACCAGTGGGACTGGTGTGGTCAGTaGACCTGTCATTACATATTC +
Preference number: 5 (lower is better)
Translates to: CGDVYQLSCIWTQILYQWDWCGQ*TCHYIF
Trigger: GAATATGTAATGACAGGTCAACTGACCACACCAGTC...CCACTGGTAAAGTATTTGAGTCCAGATGCATGAGAGTTGATATACATCCCCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCCCTCTTGATTTCATCTaGCTGGTAAGAAGTGCATCC +
Preference number: 5 (lower is better)
Translates to: STTENVKGTGLKGSDSSAPLDFI*LVRSAS
Trigger: GGATGCACTTCTTACCAGCAAGATGAAATCAAGAGG...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGGCATAATAGGCTCCTaGCACACAGAACATCGCGGG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDGIIGS*HTEHRG
Trigger: CCCGCGATGTTCTGTGTGCAAGGAGCCTATTATGCC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAGACTATCGCGTAGTTaGATGGCCTTTACTCTAGTA +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFRLSRS*MAFTLV
Trigger: TACTAGAGTAAAGGCCATCAAACTACGCGATAGTCT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAAAAATGTGGAAGTCCTaGGGAACAAAGGCCCATCAA +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAKMWKS*GTKAHQ
Trigger: TTGATGGGCCTTTGTTCCCAAGGACTTCCACATTTT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCTATCCCTCAATAAATaGGACTCTCTGCTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLSLNK*DSLLCP
Trigger: AGGACAAAGCAGAGAGTCCAATTTATTGAGGGATAG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCAAAAATGGCTGGAAGTaGTGTTTTCAGAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFKNGWK*CFQSPV
Trigger: GACAGGACTCTGAAAACACAACTTCCAGCCATTTTT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGCAGCCGACACAGATTaGACAAGAGAAGCCCAAACC +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKAADTD*TREAQT
Trigger: GGTTTGGGCTTCTCTTGTCAAATCTGTGTCGGCTGC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCGGGGTTTCACCATGTaGACCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRGFTM*TRMVSI
Trigger: GATCGAGACCATCCTGGTCAACATGGTGAAACCCCG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGTGAGCGTGGCTACTaGGAGACAGCACTGGACTTG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDCERGY*ETALDL
Trigger: CAAGTCCAGTGCTGTCTCCAAGTAGCCACGCTCACA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGAAGGATCAGCTTTCTaGGAAGGGGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSEGSAF*EGVCVC
Trigger: ACACACACACACCCCTTCCAAGAAAGCTGATCCTTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCACCCCCACCTCAAATaGCTTTGGCATATTTTAAGA +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFHPHLK*LWHILR
Trigger: TCTTAAAATATGCCAAAGCAATTTGAGGTGGGGGTG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCAGAGTTAAACAATTaGGGGGTGAGGAACGACATT +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAAELNN*GVRNDI
Trigger: AATGTCGTTCCTCACCCCCAAATTGTTTAACTCTGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATCTGATGGTATGTTTTaGAAGGCTGCACAGTACGAC +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRASDGMF*KAAQYD
Trigger: GTCGTACTGTGCAGCCTTCAAAAACATACCATCAGA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGCTCCATCAACAGTATaGACAGTTTTGTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFAPSTV*TVLSVM
Trigger: CATCACTGACAAAACTGTCAATACTGTTGATGGAGC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGCTCCATCAACAGTATaGACAGTTTTGTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVAPSTV*TVLSVM
Trigger: CATCACTGACAAAACTGTCAATACTGTTGATGGAGC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS TCA 90 bp ATTGAGGAAAAAGATCTTCCCTCTGATGAGCGTCCAGTGGAACAATaGAAAAAGCAGAACACAGGGAATCAGAAGACCAGGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: IEEKDLPSDERPVEQ*KKQNTGNQKTRFCL
Trigger: AAGACAGAACCTGGTCTTCTGATTCCCTGTGTTCTGCTTTTTTCATTGTTCCACTGGACGCTCATCAGAGGGAAGATCTTTTTCCTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000414139.5
ENST00000430340.5
ENST00000443217.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 90 bp CTCTCAGTTGCTGGACAGAGGTCTTACATGCTTGCATCCCTATCGTaGAGCCTGAAACCTACAAGTTGCTCAATAATGTTTACTGAAATT +
Preference number: 5 (lower is better)
Translates to: LSVAGQRSYMLASLS*SLKPTSCSIMFTEI
Trigger: AATTTCAGTAAACATTATTGAGCAACTTGTAGGTTTCAGGCTCCACGATAGGGATGCAAGCATGTAAGACCTCTGTCCAGCAACTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462758.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGTATTTGGGTGACCTaGTTGACCATAGGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGIWVT*LTIGRV
Trigger: GACCCTACCTATGGTCAACAAGGTCACCCAAATACC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACCCGTTTCCAGGTATTaGGGTGACCTTGTTGACCAT +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKPVSRY*GDLVDH
Trigger: ATGGTCAACAAGGTCACCCAAATACCTGGAAACGGG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCTCATACAGCATCTTTTaGGTCAGGTGCTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFSYSIF*VRCSSS
Trigger: TGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGA...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATACCGGGGCAAACTTTTaGGGTGGCTGTTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDTGANF*GGCCVD
Trigger: GTCTACACAACAGCCACCCAAAAAGTTTGCCCCGGT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TCTACCACAGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCAAGATGGGTGAGACATaGTTGGAATCTCAGATAGCT +
Preference number: 5 (lower is better)
Translates to: STTENVKGTGLKGSDSSAKMGET*LESQIA
Trigger: AGCTATCTGAGATTCCAACAATGTCTCACCCATCTT...GGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCTGTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCCTCGGAGCTTGTTGTaGCAGATGATGCAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSPRSLL*QMMQVK
Trigger: TTTTACCTGCATCATCTGCAACAACAAGCTCCGAGG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCAGGCCGATCTTGTCTaGAAATCCCACTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSQADLV*KSHCKK
Trigger: CTTCTTACAGTGGGATTTCAAGACAAGATCGGCCTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCAAGGGGTAGCAGCCTaGGTTATCTCCTTCAGACAG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDQGVAA*VISFRQ
Trigger: CTGTCTGAAGGAGATAACCAAGGCTGCTACCCCTTG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACCCAGAAAAGTAATTTaGATCAGAGAAGTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVPRKVI*IREVAP
Trigger: AGGAGCAACTTCTCTGATCAAAATTACTTTTCTGGG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCCCCAGAAAAGTAATTTaGATCAGAGAAGTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFPRKVI*IREVAP
Trigger: AGGAGCAACTTCTCTGATCAAAATTACTTTTCTGGG...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCGAACAAGTTTTGAACTaGTCTGGACCACTATTAAGC +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFEQVLN*SGPLLS
Trigger: GCTTAATAGTGGTCCAGACAAGTTCAAAACTTGTTC...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGAACAAGTTTTGAACTaGTCTGGACCACTATTAAGC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVEQVLN*SGPLLS
Trigger: GCTTAATAGTGGTCCAGACAAGTTCAAAACTTGTTC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTGGGGAAATTCTCTTaGGGTGATTCCAATTTCGTT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLGKFS*GDSNFV
Trigger: AACGAAATTGGAATCACCCAAAGAGAATTTCCCCAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGCCCATGTTTCCCTGTaGTGCCTTAAATACTCTTTT +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAAHVSL*CLKYSF
Trigger: AAAAGAGTATTTAAGGCACAACAGGGAAACATGGGC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATGCTGGGTTATATTTaGGCAGATCATCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVMLGYI*ADHLLF
Trigger: GAAGAGAAGATGATCTGCCAAAATATAACCCAGCAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGTCCTGCTTGTTCTTTaGTGGAGGGTCAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSVLLVL*WRVKGH
Trigger: ATGTCCTTTGACCCTCCACAAAAGAACAAGCAGGAC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATGTAAGAAGTCGATATaGTCCTCTAAGGTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVCKKSI*SSKVFS
Trigger: TGAGAACACCTTAGAGGACAATATCGACTTCTTACA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTGTAAGAAGTCGATATaGTCCTCTAAGGTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFCKKSI*SSKVFS
Trigger: TGAGAACACCTTAGAGGACAATATCGACTTCTTACA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTGGATGACTGGGGGCTaGGTAGTCTGTAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDWMTGG*VVCKKS
Trigger: CGACTTCTTACAGACTACCAAGCCCCCAGTCATCCA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCTTCCTTCTGCCCATaGTTTGTTCTTATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSASFCP*FVLISG
Trigger: GCCACTGATAAGAACAAACAATGGGCAGAAGGAAGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACATTTGCTATTTAACTaGGCTCTCATTAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVHLLFN*ALISPK
Trigger: CTTGGGACTAATGAGAGCCAAGTTAAATAGCAAATG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCACAGTATTGACAGTTTaGTCAGTGATGGAACTATGG +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFTVLTV*SVMELW
Trigger: CCATAGTTCCATCACTGACAAAACTGTCAATACTGT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATGGACCCTCTCCTATaGCCACCTCTGGGTAAGAAT +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKMDPLL*PPLGKN
Trigger: ATTCTTACCCAGAGGTGGCAATAGGAGAGGGTCCAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTTAAGTGGAGGTATCTaGCTTTGCCCAAACAGAGGC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSLSGGI*LCPNRG
Trigger: GCCTCTGTTTGGGCAAAGCAAGATACCTCCACTTAA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAAAAAGTATCACCCTTTaGCCAAAGAGTCAACTGGAT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVKSITL*PKSQLD
Trigger: ATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAGTCATAATCATCAGATaGAAACTCAGAGCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVVIIIR*KLRAKP
Trigger: TGGCTTTGCTCTGAGTTTCAATCTGATGATTATGAC...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GCAAAGTTGAAGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTGGCATTAATTTGGGTGACCTTGTaGACCATAGGTAGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: AKLKVFSKNLDCKHSLALIWVTL*TIGRVR
Trigger: TCTGACCCTACCTATGGTCAACAAGGTCACCCAAAT...TAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATCCCGTTTCCAGGTATTaGGGTGACCTTGTTGACCAT +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDPVSRY*GDLVDH
Trigger: ATGGTCAACAAGGTCACCCAAATACCTGGAAACGGG...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTACATTGTTGGAATCAATaGAGGAAAAAGATCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVHCWNQ*RKKIFP
Trigger: AGGGAAGATCTTTTTCCTCAATTGATTCCAACAATG...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTAATGGGTGAGACATTGTaGGAATCAATTGAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVMGETL*ESIEEK
Trigger: TTTTTCCTCAATTGATTCCAACAATGTCTCACCCAT...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACACACTGCTATGTATTCTTTCCGCTCATCCTCAGGCAGACTTATGGACTCTCAGTCCTAACCTACTACTaGAACCTTATTTCCCAATAT +
Preference number: 5 (lower is better)
Translates to: THCYVFFPLILRQTYGLSVLTYY*NLISQY
Trigger: ATATTGGGAAATAAGGTTCAAGTAGTAGGTTAGGAC...TGAGAGTCCATAAGTCTGCCTGAGGATGAGCGGAAAGAATACATAGCAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGCTTGGAACACACATaGCACTGCTCCAGAGTATTA +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGLEHT*HCSRVL
Trigger: TAATACTCTGGAGCAGTGCAATGTGTGTTCCAAGCC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACAGGCCGATCTTGTCTaGAAATCCCACTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKQADLV*KSHCKK
Trigger: CTTCTTACAGTGGGATTTCAAGACAAGATCGGCCTG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAAAAGCACCTGTGAGTaGGCAGACTCACCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYKSTCE*ADSPRK
Trigger: TTTCCTGGGTGAGTCTGCCAACTCACAGGTGCTTTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTTTTCCAATTAGCCTaGATCACTGGTCACTATAGA +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRALFQLA*ITGHYR
Trigger: TCTATAGTGACCAGTGATCAAGGCTAATTGGAAAAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTGCTCTGATTTGCAATaGTCAGGCAAAATGGACCTG +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSCSDLQ*SGKMDL
Trigger: CAGGTCCATTTTGCCTGACAATTGCAAATCAGAGCA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGAGACACAGTTGACATaGCCTCCCAAAACTAACATG +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSETQLT*PPKTNM
Trigger: CATGTTAGTTTTGGGAGGCAATGTCAACTGTGTCTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GAAAGACTAAAATGCATTGCTAACCTACGGCGGTTTCTGCCTCTGTGGAACGTATTAAGAAATCCTATTTaGATATGTTCTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: ERLKCIANLRRFLPLWNVLRNPI*ICSAEP
Trigger: GGGCTCTGCAGAACATATCAAAATAGGATTTCTTAA...TACGTTCCACAGAGGCAGAAACCGCCGTAGGTTAGCAATGCATTTTAGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCTTAAGAAATCCTATTTaGATATGTTCTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFLRNPI*ICSAEP
Trigger: GGGCTCTGCAGAACATATCAAAATAGGATTTCTTAA...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAACATTCAGTGCCAAGTaGACTGAATGCGATTGTGGC +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKTFSAK*TECDCG
Trigger: GCCACAATCGCATTCAGTCAACTTGGCACTGAATGT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGAAAAGCTGAATGAGTaGGTGATATCAGACATGAAG +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAEKLNE*VISDMK
Trigger: CTTCATGTCTGATATCACCAACTCATTCAGCTTTTC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAAGTCACTTAATGGCTaGAGCCTCAGCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSKSLNG*SLSFLF
Trigger: GAAGAGAAAGCTGAGGCTCAAGCCATTAAGTGACTT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATTATCGGAAATGCCTGTaGCAGCAACATGCACGTGGT +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDYRKCL*QQHARG
Trigger: ACCACGTGCATGTTGCTGCAACAGGCATTTCCGATA...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCAGAGTTAAACAATTaGGGGGTGAGGAACGACATT +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAELNN*GVRNDI
Trigger: AATGTCGTTCCTCACCCCCAAATTGTTTAACTCTGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCATGTTAGTTTCAATTaGCTGCCTACAGAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHVSFN*LPTEGG
Trigger: TCCTCCCTCTGTAGGCAGCAAATTGAAACTAACATG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTTCATGGCACAGATTaGCTACTTAGAAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRALHGTD*LLRKSF
Trigger: AAAGGACTTTCTAAGTAGCAAATCTGTGCCATGAAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGCTCATCTTCTCACTTaGCTGATGTGTATGCTGAAC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSAHLLT*LMCMLN
Trigger: GTTCAGCATACACATCAGCAAAGTGAGAAGATGAGC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGGAAAGGGAACGACTaGGCAAGTGTAATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRKGND*ASVICQ
Trigger: CTGGCAGATTACACTTGCCAAGTCGTTCCCTTTCCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp GTGCTACTTGAGGTCATCAGCATGGTCTGGCTTCAATTTGGAAGACAGGAATTCACTATGTGTGCTATTTaGGATACATCAGTGATGGTT +
Preference number: 5 (lower is better)
Translates to: VLLEVISMVWLQFGRQEFTMCAI*DTSVMV
Trigger: AACCATCACTGATGTATCCAAAATAGCACACATAGT...GAATTCCTGTCTTCCAAATTGAAGCCAGACCATGCTGATGACCTCAAGTAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATCATACAGCATCTTTTaGGTCAGGTGCTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKSYSIF*VRCSSS
Trigger: TGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGGTTGTTTGTATGGGTaGTACTTAGGTTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSGCLYG*YLGFGA
Trigger: TGCTCCAAAACCTAAGTACAACCCATACAAACAACC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AGAAAATGTGAAAGGCACTGGTTTAAAGGGCTCAGATTCAAGTGCCACCAATTCACATCTATGGCAGTCTaGCAAATGCAAATCCTACAA +
Preference number: 5 (lower is better)
Translates to: RKCERHWFKGLRFKCHQFTSMAV*QMQILQ
Trigger: TTGTAGGATTTGCATTTGCAAGACTGCCATAGATGT...GAATTGGTGGCACTTGAATCTGAGCCCTTTAAACCAGTGCCTTTCACATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGCTTGGAACACACATaGCACTGCTCCAGAGTATTA +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGLEHT*HCSRVL
Trigger: TAATACTCTGGAGCAGTGCAATGTGTGTTCCAAGCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTTAATAAGTATGGCTaGGCAGTTGGCAAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLNKYG*AVGKQV
Trigger: CACTTGCTTGCCAACTGCCAAGCCATACTTATTAAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGAGACACAGTTGACATaGCCTCCCAAAACTAACATG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKETQLT*PPKTNM
Trigger: CATGTTAGTTTTGGGAGGCAATGTCAACTGTGTCTC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAATTCAGAGACACAGTaGACATTGCCTCCCAAAACT +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSNSETQ*TLPPKT
Trigger: AGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAATT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGTGTCTTTTTCAGTTaGCTGGTTTCCCACAGATGG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGVFFS*LVSHRW
Trigger: CCATCTGTGGGAAACCAGCAAACTGAAAAAGACACC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTGAAATATTCATGGTaGCACCATATTAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRALKYSW*HHINAS
Trigger: TGAGGCATTAATATGGTGCAACCATGAATATTTCAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATAGAGATGTCCTGCTaGTTCTTTTGTGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIEMSC*FFCGGS
Trigger: TGACCCTCCACAAAAGAACAAGCAGGACATCTCTAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTTTTGACTTCTTCCTaGTTAGACATGGGGATTATA +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRALLTSS*LDMGII
Trigger: TATAATCCCCATGTCTAACAAGGAAGAAGTCAAAAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGTACACATGTGGATTaGCCACCTGGCAGTCAATTG +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDSTHVD*PPGSQL
Trigger: CAATTGACTGCCAGGTGGCAAATCCACATGTGTACT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCACTAAATGATATGGTCTaGGTTGATATTCTGAACCTG +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRALNDMV*VDILNL
Trigger: CAGGTTCAGAATATCAACCAAGACCATATCATTTAG...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAGAAGGAACACTTGCTaGCTGAACTGTTACGTAGAG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKRRNTC*LNCYVE
Trigger: CTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGATGATGATACTGGCTaGATGGATGATAACACTCCA +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSDDDTG*MDDNTP
Trigger: TGGAGTGTTATCATCCATCAAGCCAGTATCATCATC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCATATGGCTGCATAGTATaGAACAGACACTTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAYGCIV*NRHFSK
Trigger: TTTTGAGAAGTGTCTGTTCAATACTATGCAGCCATA...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCACCCCCACCTCAAATaGCTTTGGCATATTTTAAGA +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHPHLK*LWHILR
Trigger: TCTTAAAATATGCCAAAGCAATTTGAGGTGGGGGTG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAGTGACTTTCTTTCATTaGGCAAAGTTTCCTTATCTC +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRAVTFFH*AKFPYL
Trigger: GAGATAAGGAAACTTTGCCAAATGAAAGAAAGTCAC...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATGGAGGTATCTTGCTTaGCCCAAACAGAGGCATATT +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKWRYLA*PKQRHI
Trigger: AATATGCCTCTGTTTGGGCAAAGCAAGATACCTCCA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp CAAGAGAAGGAACACTTGCTTGCTGAACTGTTACGTAGAGCAACTTCTAGAGCAACTATGTGTGCTATTTaGGATACATCAGTGATGGTT +
Preference number: 5 (lower is better)
Translates to: QEKEHLLAELLRRATSRATMCAI*DTSVMV
Trigger: AACCATCACTGATGTATCCAAAATAGCACACATAGT...TGCTCTAGAAGTTGCTCTACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGGTTGTTTGTATGGGTaGTACTTAGGTTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKGCLYG*YLGFGA
Trigger: TGCTCCAAAACCTAAGTACAACCCATACAAACAACC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTCACCTCCAGGTTGTTaGTATGGGTTGTACTTAGGT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYSPPGC*YGLYLG
Trigger: ACCTAAGTACAACCCATACAAACAACCTGGAGGTGA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAATTCAGAGACACAGTaGACATTGCCTCCCAAAACT +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKNSETQ*TLPPKT
Trigger: AGTTTTGGGAGGCAATGTCAACTGTGTCTCTGAATT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAATAGTCAGTGCTACTaGAGGTCATCAGCATGGTCT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYNSQCY*RSSAWS
Trigger: AGACCATGCTGATGACCTCAAGTAGCACTGACTATT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTACATTATCAGCCCTATaGTCAAATAGTCAGTGCTAC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSTLSAL*SNSQCY
Trigger: GTAGCACTGACTATTTGACAATAGGGCTGATAATGT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGAAAAGCTGAATGAGTaGGTGATATCAGACATGAAG +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSEKLNE*VISDMK
Trigger: CTTCATGTCTGATATCACCAACTCATTCAGCTTTTC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCATGTACTACAGGTTTaGTGTGGCACCAAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYHVLQV*CGTKEN
Trigger: GTTCTCTTTGGTGCCACACAAAACCTGTAGTACATG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGCTATGTCACAGCTTTaGGCAAGTCACTTAATGGCT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYAMSQL*ASHLMA
Trigger: AGCCATTAAGTGACTTGCCAAAAGCTGTGACATAGC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCAAGAGAAGGAACACTaGCTTGCTGAACTGTTACGT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYQEKEH*LAELLR
Trigger: ACGTAACAGTTCAGCAAGCAAGTGTTCCTTCTCTTG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAGATGATGATACTGGCTaGATGGATGATAACACTCCA +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKDDDTG*MDDNTP
Trigger: TGGAGTGTTATCATCCATCAAGCCAGTATCATCATC...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGGGTGAGAAGTCATTaGCTATTTAACTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGVRSH*LFNLAL
Trigger: GAGAGCCAAGTTAAATAGCAAATGACTTCTCACCCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCAGAAGATCACAGATTaGAGTCAGTCTCGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYQKITD*SQSRKE
Trigger: CTCTTTGCGAGACTGACTCAAATCTGTGATCTTCTG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATGCTCATCTTCTCACTTaGCTGATGTGTATGCTGAAC +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDAHLLT*LMCMLN
Trigger: GTTCAGCATACACATCAGCAAAGTGAGAAGATGAGC...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAAAAGCTTACATTCCCTaGAAGCAGAGTACAGGAAAC +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKKAYIP*KQSTGN
Trigger: GTTTCCTGTACTCTGCTTCAAGGGAATGTAAGCTTT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCATTGTTGGAATCAATaGAGGAAAAAGATCTTCCCT +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSHCWNQ*RKKIFP
Trigger: AGGGAAGATCTTTTTCCTCAATTGATTCCAACAATG...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTAGTATGGTCTGGGGGTaGAAAAATTTAAGAAATCCT +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSSMVWG*KNLRNP
Trigger: AGGATTTCTTAAATTTTTCAACCCCCAGACCATACT...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAACACCCTTCAAAACTaGATAATGGAAGGATCAGGG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYNTLQN*IMEGSG
Trigger: CCCTGATCCTTCCATTATCAAGTTTTGAAGGGTGTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAGAGTCCACAATTTTTaGCACAAGGGCCAGGAAAAT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYRVHNF*HKGQEN
Trigger: ATTTTCCTGGCCCTTGTGCAAAAAATTGTGGACTCT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTGGGGAAATTCTCTTaGGGTGATTCCAATTTCGTT +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLGKFS*GDSNFV
Trigger: AACGAAATTGGAATCACCCAAAGAGAATTTCCCCAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTACAGATTTAAGTGGTaGGATCTTATTACAGTTGGC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYRFKW*DLITVG
Trigger: GCCAACTGTAATAAGATCCAACCACTTAAATCTGTA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAGAATCCATGATATTTaGGCCAATGCAGAGGGTCTT +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDRIHDI*ANAEGL
Trigger: AAGACCCTCTGCATTGGCCAAAATATCATGGATTCT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTTATGGCTGCATAGTATaGAACAGACACTTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSYGCIV*NRHFSK
Trigger: TTTTGAGAAGTGTCTGTTCAATACTATGCAGCCATA...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTGTGACTTTCTTTCATTaGGCAAAGTTTCCTTATCTC +
Preference number: 5 (lower is better)
Translates to: TITGHQRNANQNHYEIPSVTFFH*AKFPYL
Trigger: GAGATAAGGAAACTTTGCCAAATGAAAGAAAGTCAC...AGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATAAAGCTTACATTCCCTaGAAGCAGAGTACAGGAAAC +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDKAYIP*KQSTGN
Trigger: GTTTCCTGTACTCTGCTTCAAGGGAATGTAAGCTTT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS GCA 90 bp CTCTTGGACTTGACATCCTTTAATACATCAAAATTCAGTAAGCATTaGTTCCAAGTCTGTTATTCCTTTGAACATCCACACATCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LLDLTSFNTSKFSKH*FQVCYSFEHPHILQ
Trigger: TTGCAGGATGTGTGGATGTTCAAAGGAATAACAGACTTGGAAGCAATGCTTACTGAATTTTGATGTATTAAAGGATGTCAAGTCCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAAGATGGGTGAGACATaGTTGGAATCAATTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYKMGET*LESIEE
Trigger: TTCCTCAATTGATTCCAACAATGTCTCACCCATCTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATACATTATCAGCCCTATaGTCAAATAGTCAGTGCTAC +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYTLSAL*SNSQCY
Trigger: GTAGCACTGACTATTTGACAATAGGGCTGATAATGT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAAATCTTTTTCTCTCTGTaGCAGGCAAAATTTCATGCA +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKIFFSL*QAKFHA
Trigger: TGCATGAAATTTTGCCTGCAACAGAGAGAAAAAGAT...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAATTAAAGTCGTGTAGCTaGGAACAAAATGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLKSCS*EQNVLK
Trigger: TTTCAGCACATTTTGTTCCAAGCTACACGACTTTAA...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp ACATGTACTATAGCTCTAGGCAACAGATGGACAATCGCTTGTTTGAACTACAAACTAAATGATATGGTCTaGGTTGATATTCTGAACCTG +
Preference number: 5 (lower is better)
Translates to: TCTIALGNRWTIACLNYKLNDMV*VDILNL
Trigger: CAGGTTCAGAATATCAACCAAGACCATATCATTTAG...TTTGTAGTTCAAACAAGCGATTGTCCATCTGTTGCCTAGAGCTATAGTACATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATATTTGTTTTCAGACATaGTTAGCTCATGGATCGGCT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYICFQT*LAHGSA
Trigger: AGCCGATCCATGAGCTAACAATGTCTGAAAACAAAT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATCATTTGCTATTTAACTaGGCTCTCATTAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYHLLFN*ALISPK
Trigger: CTTGGGACTAATGAGAGCCAAGTTAAATAGCAAATG...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATACAGTATTGACAGTTTaGTCAGTGATGGAACTATGG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYTVLTV*SVMELW
Trigger: CCATAGTTCCATCACTGACAAAACTGTCAATACTGT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATAAAAGTATCACCCTTTaGCCAAAGAGTCAACTGGAT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYKSITL*PKSQLD
Trigger: ATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTT...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGTCATAATCATCAGATaGAAACTCAGAGCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYVIIIR*KLRAKP
Trigger: TGGCTTTGCTCTGAGTTTCAATCTGATGATTATGAC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTTTGTATGCTCTGATTaGCAATTGTCAGGCAAAATG +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYFVCSD*QLSGKM
Trigger: CATTTTGCCTGACAATTGCAAATCAGAGCATACAAA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp TTAGTGAAAAGTATCACCCTTTTGCCAAAGAGTCAACTGGATTCATCCAATGATATCTTTTTCTCTCTGTaGCAGGCAAAATTTCATGCA +
Preference number: 5 (lower is better)
Translates to: LVKSITLLPKSQLDSSNDIFFSL*QAKFHA
Trigger: TGCATGAAATTTTGCCTGCAACAGAGAGAAAAAGAT...ATCATTGGATGAATCCAGTTGACTCTTTGGCAAAAGGGTGATACTTTTCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTGGATCTTATTACAGTaGGCCAGAATCAAAGTTACT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYWILLQ*ARIKVT
Trigger: AGTAACTTTGATTCTGGCCAACTGTAATAAGATCCA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATTTAAAGTCGTGTAGCTaGGAACAAAATGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYLKSCS*EQNVLK
Trigger: TTTCAGCACATTTTGTTCCAAGCTACACGACTTTAA...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS-3UTR CAA 90 bp AAGAGAACTAGGGTAAGAAAAAGACAGTGGTCAAAGGAAGCTCTTAAAAGCTATGGAATAACGTTTATGTaGCTCAGAATAGGCACTTTT +
Preference number: 5 (lower is better)
Translates to: KRTRVRKRQWSKEALKSYGITFM*LRIGTF
Trigger: AAAAGTGCCTATTCTGAGCAACATAAACGTTATTCC...ATAGCTTTTAAGAGCTTCCTTTGACCACTGTCTTTTTCTTACCCTAGTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp CCAAAGGAATGGGTGGTCTCCATCCGTGCAGGCACATaGCCGAGGGGCTCACCAGTGCTTTTGGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PKEWVVSIRAGT*PRGSPVLLGGS
Trigger: GCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCCATTCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000414139.5
ENST00000416784.5
ENST00000420410.5
ENST00000426274.5
ENST00000430340.5
ENST00000443217.5
ENST00000448637.5
ENST00000454789.5
ENST00000457242.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp CCATCCGTGCAGGCACATGGCCGAGGGGCTCACCAGTaGTTTTGGGTGGCAGCCAAGATGGGTGAGACATTG +
Preference number: 6 (lower is better)
Translates to: PSVQAHGRGAHQ*FWVAAKMGETL
Trigger: CAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000414139.5
ENST00000416784.5
ENST00000420410.5
ENST00000426274.5
ENST00000430340.5
ENST00000443217.5
ENST00000448637.5
ENST00000454789.5
ENST00000457242.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp GCTGGGGTTCCCAAAGGAATGGGTGGTCTCCATCCGTaGAGGCACATGGCCGAGGGGCTCACCAGTGCTTTT +
Preference number: 6 (lower is better)
Translates to: AGVPKGMGGLHP*RHMAEGLTSAF
Trigger: AAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCCATTCCTTTGGGAACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000414139.5
ENST00000416784.5
ENST00000420410.5
ENST00000426274.5
ENST00000430340.5
ENST00000443217.5
ENST00000448637.5
ENST00000454789.5
ENST00000457242.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp GGGGGCATACCCATACCCAGGCTCCGGCTGAAGTCCTaGTGGTGGAATGTAGGCATAATCCATGCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: GGIPIPRLRLKS*WWNVGIIHASP
Trigger: CGGGGAGGCATGGATTATGCCTACATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTATGGGTATGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000487347.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp GAGGGGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAATCTTGCAGCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: EGLTSAFGWQPR*VRHCWNLAAPG
Trigger: GCCGGGCGCTGCAAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416784.5
CDS TCA 72 bp GGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATGGGTaGGACATTGTTGGAATCTTGCAGCGCCCGGCTGTC +
Preference number: 6 (lower is better)
Translates to: GSPVLLGGSQDG*DIVGILQRPAV
Trigger: GACAGCCGGGCGCTGCAAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416784.5
CDS GCA 72 bp TGGAGCTCTGTGGAGGCCGAGGCTTATAGGGGGAGCTaGACTCAAGGTCAGCCAAGATGCTGGTCAAGGAGT +
Preference number: 6 (lower is better)
Translates to: WSSVEAEAYRGS*TQGQPRCWSRS
Trigger: ACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTCCACAGAGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp TTGGGACCAGTGACTGGATACATCCCAGGAGGGTTCTaGTTCCCTGCTCCAGGAGGAGTGTACCCTGGTTCC +
Preference number: 6 (lower is better)
Translates to: LGPVTGYIPGGF*FPAPGGVYPGS
Trigger: GGAACCAGGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGATGTATCCAGTCACTGGTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp CAGGCCCTCAGTCCACTACGGGACACAGCAAGGCGGTaGTCTCGAAGCCTGAAGGGAACAGAACTGAGACAT +
Preference number: 6 (lower is better)
Translates to: QALSPLRDTARR*SRSLKGTELRH
Trigger: ATGTCTCAGTTCTGTTCCCTTCAGGCTTCGAGACCACCGCCTTGCTGTGTCCCGTAGTGGACTGAGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420410.5
ENST00000443217.5
CDS CCA 72 bp CGAACCCACAGACAAAAAGTGAAACTTCGGCAGGGCTaGAGCGGCTGCTGGTTGGTGCCTTTCCCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RTHRQKVKLRQG*SGCWLVPFPLL
Trigger: AAGGAGGGGGAAAGGCACCAACCAGCAGCCGCTCCAGCCCTGCCGAAGTTTCACTTTTTGTCTGTGGGTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416784.5
ENST00000430340.5
CDS CCA 72 bp AGATGCTGGTCAAGGAGTCAATCTCAGCGTCCAGGCTaGAGCGCCTCTCCTCAAGTGTCTTGCCTCCGGGAT +
Preference number: 6 (lower is better)
Translates to: RCWSRSQSQRPG*SASPQVSCLRD
Trigger: ATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAGATTGACTCCTTGACCAGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp AATGCAGTGAATGAGCCCGCCAGCATCCACAGTGAATaGGATCCCATCCAGGCTGCGGTGGCACATCACGCA +
Preference number: 6 (lower is better)
Translates to: NAVNEPASIHSE*DPIQAAVAHHA
Trigger: TGCGTGATGTGCCACCGCAGCCTGGATGGGATCCCATTCACTGTGGATGCTGGCGGGCTCATTCACTGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 72 bp TCAGCGTCCAGGCTGGAGCGCCTCTCCTCAAGTGTCTaGCCTCCGGGATTCCCCTGTACTTTGAAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SASRLERLSSSV*PPGFPCTLKAS
Trigger: AGAGGCTTTCAAAGTACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS TCA 72 bp GCCACCCTTTGGCTGCAATGGTGGCGCACAGGGGGCTaGAACAGGATCTGTGATATAGGTCTTCTTGGGACC +
Preference number: 6 (lower is better)
Translates to: ATLWLQWWRTGG*NRICDIGLLGT
Trigger: GGTCCCAAGAAGACCTATATCACAGATCCTGTTTCAGCCCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS TCA 72 bp TCTAAAGGTCAGTGCTCGCCTTGGCGGTCAACACCCTaGTGCGGGCAGAGTTGCAGGTCTTGCAGAGGATGT +
Preference number: 6 (lower is better)
Translates to: SKGQCSPWRSTP*CGQSCRSCRGC
Trigger: ACATCCTCTGCAAGACCTGCAACTCTGCCCGCATCAGGGTGTTGACCGCCAAGGCGAGCACTGACCTTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp GCTGAAGTCCTGGTGGTGGAATGTAGGCATAATCCATaGCTCCCCGTGTTGAAGGAGGTGGACACTGCCCAG +
Preference number: 6 (lower is better)
Translates to: AEVLVVECRHNP*LPVLKEVDTAQ
Trigger: CTGGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGGATTATGCCTACATTCCACCACCAGGACTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000487347.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp AGTGACTGGATACATCCCAGGAGGGTTCTGGTTCCCTaGTCCAGGAGGAGTGTACCCTGGTTCCCGTTTCCA +
Preference number: 6 (lower is better)
Translates to: SDWIHPRRVLVP*SRRSVPWFPFP
Trigger: TGGAAACGGGAACCAGGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGATGTATCCAGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp GCTTATAGGGGGAGCTGCACTCAAGGTCAGCCAAGATaGTGGTCAAGGAGTCAATCTCAGCGTCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: AYRGSCTQGQPR*WSRSQSQRPGW
Trigger: CCAGCCTGGACGCTGAGATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp CTTTCCTCTGTGGAGGCCGAGGCTTATAGGGGGAGCTaGACTCAAGGTCAGCCAAGATGCTGGTCAAGGAGT +
Preference number: 6 (lower is better)
Translates to: LSSVEAEAYRGS*TQGQPRCWSRS
Trigger: ACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTCCACAGAGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS CCA 72 bp CTGCTGCATAGTAGCCTTCATAATAGCGTCCCTGGTTaGGGGCATACCCATACCCAGGCTCCGGCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: LLHSSLHNSVPG*GHTHTQAPAEV
Trigger: GACTTCAGCCGGAGCCTGGGTATGGGTATGCCCCCAACCAGGGACGCTATTATGAAGGCTACTATGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp TGTGTAGACACTGAAATGCTGGGGTTCCCAAAGGAATaGGTGGTCTCCATCCGTGCAGGCACATGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: CVDTEMLGFPKE*VVSIRAGTWPR
Trigger: CCTCGGCCATGTGCCTGCACGGATGGAGACCACCCATTCCTTTGGGAACCCCAGCATTTCAGTGTCTACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000414139.5
ENST00000416784.5
ENST00000420410.5
ENST00000426274.5
ENST00000430340.5
ENST00000443217.5
ENST00000448637.5
ENST00000454789.5
ENST00000457242.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp GAGGGGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAATACGATGTCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: EGLTSAFGWQPR*VRHCWNTMSSP
Trigger: GGGGCTGGACATCGTATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420410.5
CDS CCA 72 bp AGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATACG +
Preference number: 6 (lower is better)
Translates to: RHMAEGLTSAFG*QPRWVRHCWNT
Trigger: CGTATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420410.5
CDS CCA 72 bp TATAGGGGGAGCTGCACTCAAGGTCAGCCAAGATGCTaGTCAAGGAGTCAATCTCAGCGTCCAGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: YRGSCTQGQPRC*SRSQSQRPGWS
Trigger: GCTCCAGCCTGGACGCTGAGATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp AGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATCTC +
Preference number: 6 (lower is better)
Translates to: RHMAEGLTSAFG*QPRWVRHCWNL
Trigger: GAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426274.5
ENST00000448637.5
ENST00000454789.5
ENST00000617246.5
CDS CCA 72 bp AGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATCTG +
Preference number: 6 (lower is better)
Translates to: RHMAEGLTSAFG*QPRWVRHCWNL
Trigger: CAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430340.5
CDS CAA 72 bp TCTTCTGCTCTGTCTCTGAGCCTCAAAGTTCCCACCTaGCAGCGCCCGGCTGTCTCCCGATCGCTAAAGCTA +
Preference number: 6 (lower is better)
Translates to: SSALSLSLKVPT*QRPAVSRSLKL
Trigger: TAGCTTTAGCGATCGGGAGACAGCCGGGCGCTGCAAGGTGGGAACTTTGAGGCTCAGAGACAGAGCAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414139.5
ENST00000430340.5
CDS CAA 90 bp GAAGTCCTGGTGGTGGAATGTAGGCATAATCCATGCCTCCCCGTGTaGAAGGAGGTGGACACTGCCCAGAGACAGGAACTGGCTGAGTGT +
Preference number: 6 (lower is better)
Translates to: EVLVVECRHNPCLPV*KEVDTAQRQELAEC
Trigger: ACACTCAGCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGGATTATGCCTACATTCCACCACCAGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000487347.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS TCA 72 bp TGGTGGAATGTAGGCATAATCCATGCCTCCCCGTGTTaGAGGAGGTGGACACTGCCCAGAGACAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: WWNVGIIHASPC*RRWTLPRDRNW
Trigger: CCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGGATTATGCCTACATTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000487347.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS TCA 72 bp GGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATGGGTaGGACATTGTTGGAATACGATGTCCAGCCCCCACA +
Preference number: 6 (lower is better)
Translates to: GSPVLLGGSQDG*DIVGIRCPAPT
Trigger: TGTGGGGGCTGGACATCGTATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420410.5
CDS CCA 72 bp AGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATCAA +
Preference number: 6 (lower is better)
Translates to: RHMAEGLTSAFG*QPRWVRHCWNQ
Trigger: TTGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414139.5
ENST00000443217.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp AGGCACATGGCCGAGGGGCTCACCAGTGCTTTTGGGTaGCAGCCAAGATGGGTGAGACATTGTTGGAATCTT +
Preference number: 6 (lower is better)
Translates to: RHMAEGLTSAFG*QPRWVRHCWNL
Trigger: AAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416784.5
ENST00000457242.1
CDS CAA 72 bp GCTGTTAGAGGGGGTTGGTTCGGGATGACCATTCTCTaGTGTCCTGTGACTGGGGTCGAAACTGGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: AVRGGWFGMTIL*CPVTGVETGGE
Trigger: CTCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000448637.5
ENST00000462758.1
ENST00000471917.1
ENST00000487347.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 90 bp GAGTCAATCTCAGCGTCCAGGCTGGAGCGCCTCTCCTCAAGTGTCTaGCCTCCGGGATTCCCCTGTACTTTGAAAGCCTCTTCATCAAGA +
Preference number: 6 (lower is better)
Translates to: ESISASRLERLSSSV*PPGFPCTLKASSSR
Trigger: TCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAGATTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416784.5
ENST00000448637.5
ENST00000474472.5
ENST00000484468.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS TCA 72 bp GGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATGGGTaGGACATTGTTGGAATCTCAGATAGCTGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GSPVLLGGSQDG*DIVGISDSWLL
Trigger: CAGGAGCCAGCTATCTGAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426274.5
ENST00000448637.5
ENST00000454789.5
ENST00000617246.5
CDS CAA 72 bp CCCTGGTTCCCGTTTCCAGGTATTTGGGTGACCTTGTaGACCATAGGTAGGGTCAGAGTCATTTCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: PWFPFPGIWVTL*TIGRVRVISAP
Trigger: GGGGGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 72 bp TCAGAGCTGGCAAAGACCAACTTCCAACCCGTCCGCTaGGCACGTGAGGAAACTGAAGCTCTCGGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: SELAKTNFQPVR*AREETEALGRE
Trigger: TTCTCTTCCGAGAGCTTCAGTTTCCTCACGTGCCAAGCGGACGGGTTGGAAGTTGGTCTTTGCCAGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS CAA 90 bp AGGAGTGTACCCTGGTTCCCGTTTCCAGGTATTTGGGTGACCTTGTaGACCATAGGTAGGGTCAGAGTCATTTCTGCCCCCATAGCCTGG +
Preference number: 6 (lower is better)
Translates to: RSVPWFPFPGIWVTL*TIGRVRVISAPIAW
Trigger: CCAGGCTATGGGGGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGGTACACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 90 bp AGGAGGAGTGTACCCTGGTTCCCGTTTCCAGGTATTTGGGTGACCTaGTTGACCATAGGTAGGGTCAGAGTCATTTCTGCCCCCATAGCC +
Preference number: 6 (lower is better)
Translates to: RRSVPWFPFPGIWVT*LTIGRVRVISAPIA
Trigger: GGCTATGGGGGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGGTACACTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 90 bp GAGACATTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATGGTaGACACAAGGTTCAGCCAACTGCAATGCTTGCAGCGCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: ETLLESQIAGSWNGW*TQGSANCNACSARL
Trigger: CAGCCGGGCGCTGCAAGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454789.5
CDS TCA 72 bp TCTTGTGTTCGTTCTTCTCAGTGCCGGCTGAACAGGTaGCTGAATCTAAAGGTCAGTGCTCGCCTTGGCGGT +
Preference number: 6 (lower is better)
Translates to: SCVRSSQCRLNR*LNLKVSARLGG
Trigger: ACCGCCAAGGCGAGCACTGACCTTTAGATTCAGTCACCTGTTCAGCCGGCACTGAGAAGAACGAACACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp AGGAGGAGTGTACCCTGGTTCCCGTTTCCAGGTATTTaGGTGACCTTGTTGACCATAGGTAGGGTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: RRSVPWFPFPGI*VTLLTIGRVRV
Trigger: GACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGGTACACTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp AGGATCTGTGATATAGGTCTTCTTGGGACCAGTGACTaGATACATCCCAGGAGGGTTCTGGTTCCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RICDIGLLGTSD*IHPRRVLVPCS
Trigger: GGAGCAGGGAACCAGAACCCTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGACCTATATCACAGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp GAGGGGCTCACCAGTGCTTTTGGGTGGCAGCCAAGATaGGTGAGACATTGTTGGAATCTTGAGATGAGATCC +
Preference number: 6 (lower is better)
Translates to: EGLTSAFGWQPR*VRHCWNLEMRS
Trigger: GGATCTCATCTCAAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457242.1
CDS CAA 72 bp TTCCCGGTGGCTCGGAGAATCCGCTCCATGATGGGCTaGGAACACACATTGCACTGCTCCAGAGTATTAATG +
Preference number: 6 (lower is better)
Translates to: FPVARRIRSMMG*EHTLHCSRVLM
Trigger: CATTAATACTCTGGAGCAGTGCAATGTGTGTTCCAAGCCCATCATGGAGCGGATTCTCCGAGCCACCGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000459897.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 90 bp TTCTTGGTTGCTGTTAGAGGGGGTTGGTTCGGGATGACCATTCTCTaGTGTCCTGTGACTGGGGTCGAAACTGGAGGAGAGGCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: FLVAVRGGWFGMTIL*CPVTGVETGGEAVE
Trigger: TTCAACAGCCTCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGCAACCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000448637.5
ENST00000462758.1
ENST00000471917.1
ENST00000487347.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 72 bp GTACCCTGGTTCCCGTTTCCAGGTATTTGGGTGACCTaGTTGACCATAGGTAGGGTCAGAGTCATTTCTGCC +
Preference number: 6 (lower is better)
Translates to: VPWFPFPGIWVT*LTIGRVRVISA
Trigger: GGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS TCA 72 bp CGAGCACAGCGGCCCCATGGTTCTAGTTCTGTCTTCTaGGACCTTATCTCTCTCTTGGACTTGACATCCTTT +
Preference number: 6 (lower is better)
Translates to: RAQRPHGSSSVF*DLISLLDLTSF
Trigger: AAAGGATGTCAAGTCCAAGAGAGAGATAAGGTCTCAGAAGACAGAACTAGAACCATGGGGCCGCTGTGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS TCA 72 bp CAGATGATGCAGGTAAAACAATCCACGTGGAAGACCTaGTCCATGGCAGTGCATCCTGTACCTTCCCCAACT +
Preference number: 6 (lower is better)
Translates to: QMMQVKQSTWKT*SMAVHPVPSPT
Trigger: AGTTGGGGAAGGTACAGGATGCACTGCCATGGATCAGGTCTTCCACGTGGATTGTTTTACCTGCATCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000459897.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp GTCTCTCCATCATCCCAGGTCACAGATGTATCCATCTaGCAGCTCCATGAACTACAGGACAGCAATACCAGA +
Preference number: 6 (lower is better)
Translates to: VSPSSQVTDVSI*QLHELQDSNTR
Trigger: TCTGGTATTGCTGTCCTGTAGTTCATGGAGCTGGCAGATGGATACATCTGTGACCTGGGATGATGGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457242.1
CDS GCA 72 bp CTGCTCCAGAGTATTAATGTAGCAGGGCTCGCAGTATaGTTTCTTTTCCACAGCATAGAATGGCTGCCCTCG +
Preference number: 6 (lower is better)
Translates to: LLQSINVAGLAV*FLFHSIEWLPS
Trigger: CGAGGGCAGCCATTCTATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGCTACATTAATACTCTGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000459897.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp CAGCAGGTGGATTTTCCATGTCATACAGCATCTTTTTaGTCAGGTGCTCAAGCTCATCCTCTGGGCGGAATG +
Preference number: 6 (lower is better)
Translates to: QQVDFPCHTASF*SGAQAHPLGGM
Trigger: CATTCCGCCCAGAGGATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGACATGGAAAATCCACCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CCA 72 bp GGTGAGACATTGTTGGAATCTCAGATAGCTGGCTCCTaGAATGGATGGTTGACACAAGGTTCAGCCAACTGC +
Preference number: 6 (lower is better)
Translates to: GETLLESQIAGS*NGWLTQGSANC
Trigger: GCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTCACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426274.5
ENST00000448637.5
ENST00000454789.5
ENST00000617246.5
CDS CAA 90 bp GCTCACCAGTGCTTTTGGGTGGCAGCCAAGATGGGTGAGACATTGTaGGAATCTGTGAGTAAGAACATGCGGTCTTTGGTTTTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: AHQCFWVAAKMGETL*ESVSKNMRSLVFCP
Trigger: AGGACAGAAAACCAAAGACCGCATGTTCTTACTCACAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430340.5
CDS CAA 90 bp TCGGTAGAAGCTCAGGCATTGAACACCACTCTGACACCATCTCCTTaGAGGTTGATTCCACTTTGCTGGTGTTACCAGCCAACATCCTGT +
Preference number: 6 (lower is better)
Translates to: SVEAQALNTTLTPSP*RLIPLCWCYQPTSC
Trigger: ACAGGATGTTGGCTGGTAACACCAGCAAAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGTGGTGTTCAATGCCTGAGCTTCTACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS TCA 72 bp GAATGGATGGTTGACACAAGGTTCAGCCAACTGCAATaGAGGTGTCAGAGCTGGCAAAGACCAACTTCCAAC +
Preference number: 6 (lower is better)
Translates to: EWMVDTRFSQLQ*RCQSWQRPTSN
Trigger: GTTGGAAGTTGGTCTTTGCCAGCTCTGACACCTTCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS GCA 72 bp TCCTGGAATGGATGGTTGACACAAGGTTCAGCCAACTaGAATGAAGGTGTCAGAGCTGGCAAAGACCAACTT +
Preference number: 6 (lower is better)
Translates to: SWNGWLTQGSAN*NEGVRAGKDQL
Trigger: AAGTTGGTCTTTGCCAGCTCTGACACCTTCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS CCA 72 bp TTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGCAGGT +
Preference number: 6 (lower is better)
Translates to: LLESQIAGSWNG*LTQGSANCNAG
Trigger: ACCTGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426274.5
CDS CCA 72 bp TTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGCTTGC +
Preference number: 6 (lower is better)
Translates to: LLESQIAGSWNG*LTQGSANCNAC
Trigger: GCAAGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454789.5
CDS CCA 72 bp CTGGGGTCGAAACTGGAGGAGAGGCTGTTGAACCAGTaGAGCTTCCATTTTCCAGATACTTCAAATTCCTCA +
Preference number: 6 (lower is better)
Translates to: LGSKLEERLLNQ*SFHFPDTSNSS
Trigger: TGAGGAATTTGAAGTATCTGGAAAATGGAAGCTCCACTGGTTCAACAGCCTCTCCTCCAGTTTCGACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471917.1
CDS CCA 72 bp ACAGCGAGCACAGCGGCCAAAGTATTCGTCAGCAGGTaGATTTTCCATGTCATACAGCATCTTTTTGGTCAG +
Preference number: 6 (lower is better)
Translates to: TASTAAKVFVSR*IFHVIQHLFGQ
Trigger: CTGACCAAAAAGATGCTGTATGACATGGAAAATCCACCTGCTGACGAATACTTTGGCCGCTGTGCTCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 72 bp TCAGCAGGTGGATTTTCCATGTCATACAGCATCTTTTaGGTCAGGTGCTCAAGCTCATCCTCTGGGCGGAAT +
Preference number: 6 (lower is better)
Translates to: SAGGFSMSYSIF*VRCSSSSSGRN
Trigger: ATTCCGCCCAGAGGATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGACATGGAAAATCCACCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415906.1
ENST00000448637.5
ENST00000471917.1
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 72 bp CACTCTGACACCATCTCCTTTGAGGTTGATTCCACTTaGCTGGTGTTACCAGCCAACATCCTGTTTAGCTGC +
Preference number: 6 (lower is better)
Translates to: HSDTISFEVDST*LVLPANILFSC
Trigger: GCAGCTAAACAGGATGTTGGCTGGTAACACCAGCAAAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS CAA 72 bp GCATTGAACACCACTCTGACACCATCTCCTTTGAGGTaGATTCCACTTTGCTGGTGTTACCAGCCAACATCC +
Preference number: 6 (lower is better)
Translates to: ALNTTLTPSPLR*IPLCWCYQPTS
Trigger: GGATGTTGGCTGGTAACACCAGCAAAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGTGGTGTTCAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS CAA 90 bp GAGACATTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATGGTaGACACAAGGTTCAGCCAACTGCAATGCAGGTCTTGCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: ETLLESQIAGSWNGW*TQGSANCNAGLAED
Trigger: ATCTTCAGCAAGACCTGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426274.5
CDS CAA 90 bp CAGTGGAGCTCAGTCTATCTTTCTCATTGTAGTTTTACCTCTCAGTaGCTGGACAGAGGTCTTACATGCTTGCATCCCTATCGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: QWSSVYLSHCSFTSQ*LDRGLTCLHPYRGA
Trigger: GGCTCCACGATAGGGATGCAAGCATGTAAGACCTCTGTCCAGCAACTGAGAGGTAAAACTACAATGAGAAAGATAGACTGAGCTCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462758.1
CDS CAA 90 bp GAAGCTCAGGCATTGAACACCACTCTGACACCATCTCCTTTGAGGTaGATTCCACTTTGCTGGTGTTACCAGCCAACATCCTGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: EAQALNTTLTPSPLR*IPLCWCYQPTSCLA
Trigger: AGCTAAACAGGATGTTGGCTGGTAACACCAGCAAAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGTGGTGTTCAATGCCTGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS CAA 90 bp ATTGAACACCACTCTGACACCATCTCCTTTGAGGTTGATTCCACTTaGCTGGTGTTACCAGCCAACATCCTGTTTAGCTGCTTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: IEHHSDTISFEVDST*LVLPANILFSCFPL
Trigger: CAGAGGAAAGCAGCTAAACAGGATGTTGGCTGGTAACACCAGCAAAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGTGGTGTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS TCA 72 bp CTAGGTGCTCAAGTCCCATCTCTATTTCTTGCTCTCTaGGACCTTGAGCAACTCATTTTACTTCTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LGAQVPSLFLAL*DLEQLILLLWA
Trigger: GGCCCAGAGAAGTAAAATGAGTTGCTCAAGGTCTCAGAGAGCAAGAAATAGAGATGGGACTTGAGCACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457242.1
CDS TCA 72 bp CTTGAGTCTAATGCGTCAGCGAGAATGCTGTTATTATaGCGGATACATTTTGAATGGGAACGGGCTGCACGC +
Preference number: 6 (lower is better)
Translates to: LESNASARMLLL*RIHFEWERAAR
Trigger: GCGTGCAGCCCGTTCCCATTCAAAATGTATCCGTCATAATAACAGCATTCTCGCTGACGCATTAGACTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS GCA 72 bp ACTCTGACACCATCTCCTTTGAGGTTGATTCCACTTTaGTGGTGTTACCAGCCAACATCCTGTTTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: TLTPSPLRLIPL*WCYQPTSCLAA
Trigger: AGCAGCTAAACAGGATGTTGGCTGGTAACACCAGCAAAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS CCA 72 bp TTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGAAGGT +
Preference number: 6 (lower is better)
Translates to: LLESQIAGSWNG*LTQGSANCNEG
Trigger: ACCTTCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448637.5
CDS CCA 72 bp TTCAATGTAGACTTCTTGGTTGCTGTTAGAGGGGGTTaGTTCGGGATGACCATTCTCTTGTGTCCTGTGACT +
Preference number: 6 (lower is better)
Translates to: FNVDFLVAVRGG*FGMTILLCPVT
Trigger: AGTCACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGCAACCAAGAAGTCTACATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000448637.5
ENST00000462758.1
ENST00000471917.1
ENST00000487347.1
ENST00000494233.5
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 72 bp TGCTTTTGGGTGGCAGCCAAGATGGGTGAGACATTGTaGGAATCTGTGAGTAAGAACATGCGGTCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: CFWVAAKMGETL*ESVSKNMRSLV
Trigger: AACCAAAGACCGCATGTTCTTACTCACAGATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430340.5
CDS CAA 90 bp CAAGACATTTTCACACAAGTGACTCACTCGGTAGAAGCTCAGGCATaGAACACCACTCTGACACCATCTCCTTTGAGGTTGATTCCACTT +
Preference number: 6 (lower is better)
Translates to: QDIFTQVTHSVEAQA*NTTLTPSPLRLIPL
Trigger: AAGTGGAATCAACCTCAAAGGAGATGGTGTCAGAGTGGTGTTCAATGCCTGAGCTTCTACCGAGTGAGTCACTTGTGTGAAAATGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484468.1
CDS TCA 72 bp GAATGCAGCATGGCTAGGCTGGTAATCCTGCCTCGATaGTCAGCAGCAATTAAACCCCATAAAACTTCCTTT +
Preference number: 6 (lower is better)
Translates to: ECSMARLVILPR*SAAIKPHKTSF
Trigger: AAAGGAAGTTTTATGGGGTTTAATTGCTGCTGATCATCGAGGCAGGATTACCAGCCTAGCCATGCTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474472.5
CDS CCA 72 bp TTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATaGTTGACACAAGGTTCAGCCAACTGCAATGCAATT +
Preference number: 6 (lower is better)
Translates to: LLESQIAGSWNG*LTQGSANCNAI
Trigger: AATTGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617246.5
CDS CAA 90 bp TATGACGGATACATTTTGAATGGGAACGGGCTGCACGCACTTGGATaGTATTTGCTTGATCTGCCAGAGGAGAACCAGAAGCAAAAGTAT +
Preference number: 6 (lower is better)
Translates to: YDGYILNGNGLHALG*YLLDLPEENQKQKY
Trigger: ATACTTTTGCTTCTGGTTCTCCTCTGGCAGATCAAGCAAATACAATCCAAGTGCGTGCAGCCCGTTCCCATTCAAAATGTATCCGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS CAA 90 bp TTATCAGCATTCTATACATGCTGTGTGGTCTGTCTAGAATACCTCTaGACTTCGAAAGTGACTGCAATGCTGAGGCCATTCCTTCCACAG +
Preference number: 6 (lower is better)
Translates to: LSAFYTCCVVCLEYL*TSKVTAMLRPFLPQ
Trigger: CTGTGGAAGGAATGGCCTCAGCATTGCAGTCACTTTCGAAGTCAAGAGGTATTCTAGACAGACCACACAGCATGTATAGAATGCTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS CAA 90 bp GAGACATTGTTGGAATCTCAGATAGCTGGCTCCTGGAATGGATGGTaGACACAAGGTTCAGCCAACTGCAATGCAATTGAGGAAAAAGAT +
Preference number: 6 (lower is better)
Translates to: ETLLESQIAGSWNGW*TQGSANCNAIEEKD
Trigger: ATCTTTTTCCTCAATTGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAGATTCCAACAATGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617246.5
CDS TCA 72 bp GTCAGCGAGAATGCTGTTATTATGACGGATACATTTTaGATGGGAACGGGCTGCACGCACTTGGATTGTATT +
Preference number: 6 (lower is better)
Translates to: VSENAVIMTDTF*MGTGCTHLDCI
Trigger: AATACAATCCAAGTGCGTGCAGCCCGTTCCCATTCAAAATGTATCCGTCATAATAACAGCATTCTCGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS CAA 72 bp CACACATCCTGCAATAGTTTCATATACTGTAGGGTTTaGAGTCTTTCAGGGCCACGGTTCTCGTTGTTCATG +
Preference number: 6 (lower is better)
Translates to: HTSCNSFIYCRV*SLSGPRFSLFM
Trigger: CATGAACAACGAGAACCGTGGCCCTGAAAGACTCAAAACCCTACAGTATATGAAACTATTGCAGGATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS CAA 72 bp TTCTATACATGCTGTGTGGTCTGTCTAGAATACCTCTaGACTTCGAAAGTGACTGCAATGCTGAGGCCATTC +
Preference number: 6 (lower is better)
Translates to: FYTCCVVCLEYL*TSKVTAMLRPF
Trigger: GAATGGCCTCAGCATTGCAGTCACTTTCGAAGTCAAGAGGTATTCTAGACAGACCACACAGCATGTATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS CAA 90 bp AGTCTAATGCGTCAGCGAGAATGCTGTTATTATGACGGATACATTTaGAATGGGAACGGGCTGCACGCACTTGGATTGTATTTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: SLMRQRECCYYDGYI*NGNGLHALGLYLLD
Trigger: ATCAAGCAAATACAATCCAAGTGCGTGCAGCCCGTTCCCATTCAAAATGTATCCGTCATAATAACAGCATTCTCGCTGACGCATTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS TCA 72 bp CATGCAGTATTCTGCGAAGCTCCAGCATTCTTAAATTaGTTAATGTGGCATCTGGCCTATTCCCAGTTCTGT +
Preference number: 6 (lower is better)
Translates to: HAVFCEAPAFLN*LMWHLAYSQFC
Trigger: ACAGAACTGGGAATAGGCCAGATGCCACATTAATCAATTTAAGAATGCTGGAGCTTCGCAGAATACTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS CCA 72 bp TCTATCTTTCTCATTGTAGTTTTACCTCTCAGTTGCTaGACAGAGGTCTTACATGCTTGCATCCCTATCGTG +
Preference number: 6 (lower is better)
Translates to: SIFLIVVLPLSC*TEVLHACIPIV
Trigger: CACGATAGGGATGCAAGCATGTAAGACCTCTGTCCAGCAACTGAGAGGTAAAACTACAATGAGAAAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462758.1
CDS CAA 72 bp TCATGCAGTATTCTGCGAAGCTCCAGCATTCTTAAATaGATTAATGTGGCATCTGGCCTATTCCCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: SCSILRSSSILK*INVASGLFPVL
Trigger: CAGAACTGGGAATAGGCCAGATGCCACATTAATCAATTTAAGAATGCTGGAGCTTCGCAGAATACTGCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS CAA 90 bp TTGAACATCCACACATCCTGCAATAGTTTCATATACTGTAGGGTTTaGAGTCTTTCAGGGCCACGGTTCTCGTTGTTCATGCAGTATTCT +
Preference number: 6 (lower is better)
Translates to: LNIHTSCNSFIYCRV*SLSGPRFSLFMQYS
Trigger: AGAATACTGCATGAACAACGAGAACCGTGGCCCTGAAAGACTCAAAACCCTACAGTATATGAAACTATTGCAGGATGTGTGGATGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459897.1
CDS CAA 90 bp ATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTaGGACTGTAAACACAGCTTGGCATTATCAGCATTCACTTGCCTA +
Preference number: 6 (lower is better)
Translates to: IPHRESAKLKVFSKN*DCKHSLALSAFTCL
Trigger: TAGGCAAGTGAATGCTGATAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494044.1
CDS CAA 90 bp TCGCGTAGTTTGATGGCCTTTACTCTAGTATTTCTTATCTTTTTCTaGTGTTCGTTCTTCTCAGTGCCGGCTGAACAGGTGACTGAATCT +
Preference number: 6 (lower is better)
Translates to: SRSLMAFTLVFLIFF*CSFFSVPAEQVTES
Trigger: AGATTCAGTCACCTGTTCAGCCGGCACTGAGAAGAACGAACACAAGAAAAAGATAAGAAATACTAGAGTAAAGGCCATCAAACTACGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617246.5
ENST00000618621.4
ENST00000640853.1
CDS CAA 72 bp AGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTaGGACTGTAAACACAGCTTGGCATTATCAGCATTC +
Preference number: 6 (lower is better)
Translates to: RESAKLKVFSKN*DCKHSLALSAF
Trigger: GAATGCTGATAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415906.1
ENST00000483938.1
ENST00000494044.1
CDS CAA 90 bp ATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTaGGACTGTAAACACAGCTTGGCATTATCAGCATTCTATACATGC +
Preference number: 6 (lower is better)
Translates to: IPHRESAKLKVFSKN*DCKHSLALSAFYTC
Trigger: GCATGTATAGAATGCTGATAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS CAA 90 bp ATACCACACAGGGAGAGTGCAAAGTTGAAGGTCTTCAGCAAAAATTaGGACTGTAAACACAGCTTGGCATTATCAGCATTCAAAGTATTC +
Preference number: 6 (lower is better)
Translates to: IPHRESAKLKVFSKN*DCKHSLALSAFKVF
Trigger: GAATACTTTGAATGCTGATAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCTTCAACTTTGCACTCTCCCTGTGTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS GCA 72 bp ATTAAGTCCACCTTGAGTCTAATGCGTCAGCGAGAATaGTGTTATTATGACGGATACATTTTGAATGGGAAC +
Preference number: 6 (lower is better)
Translates to: IKSTLSLMRQRE*CYYDGYILNGN
Trigger: GTTCCCATTCAAAATGTATCCGTCATAATAACAGCATTCTCGCTGACGCATTAGACTCAAGGTGGACTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS CCA 72 bp TTGGCATTATCAGCATTCAAAGTATTCGTCAGCAGGTaGATTTTCCATGTCATACAGCATCTTTTTGGTCAG +
Preference number: 6 (lower is better)
Translates to: LALSAFKVFVSR*IFHVIQHLFGQ
Trigger: CTGACCAAAAAGATGCTGTATGACATGGAAAATCCACCTGCTGACGAATACTTTGAATGCTGATAATGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS CCA 72 bp AGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTaGCATTATCAGCATTCAAAGTATTCGTCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: RSSAKIWTVNTA*HYQHSKYSSAG
Trigger: ACCTGCTGACGAATACTTTGAATGCTGATAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415906.1
CDS CCA 72 bp AGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTaGCATTATCAGCATTCTATACATGCTGTGTGGTCT +
Preference number: 6 (lower is better)
Translates to: RSSAKIWTVNTA*HYQHSIHAVWS
Trigger: AGACCACACAGCATGTATAGAATGCTGATAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483938.1
CDS CCA 72 bp AGGTCTTCAGCAAAAATTTGGACTGTAAACACAGCTTaGCATTATCAGCATTCACTTGCCTATTCATTGCCT +
Preference number: 6 (lower is better)
Translates to: RSSAKIWTVNTA*HYQHSLAYSLP
Trigger: AGGCAATGAATAGGCAAGTGAATGCTGATAATGCCAAGCTGTGTTTACAGTCCAAATTTTTGCTGAAGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494044.1
CDS CAA 72 bp TATACAAATATAATTTTTCTTCAGGCCGATCTTGTCTaGAAATCCCACTGTAAGAAGTACTCCCCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: YTNIIFLQADLV*KSHCKKYSPGK
Trigger: TTTCCCAGGGGAGTACTTCTTACAGTGGGATTTCAAGACAAGATCGGCCTGAAGAAAAATTATATTTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618621.4
ENST00000640853.1
CDS GCA 72 bp TTGACATCCTTTAATACATCAAAATTCAGTAAGCATTaGTTCCAAGTCTGTTATTCCTTTGAACATCCACAC +
Preference number: 6 (lower is better)
Translates to: LTSFNTSKFSKH*FQVCYSFEHPH
Trigger: GTGTGGATGTTCAAAGGAATAACAGACTTGGAAGCAATGCTTACTGAATTTTGATGTATTAAAGGATGTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459897.1