RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134324

Ensembl transcript IDs: ENST00000256720.6, ENST00000396097.5, ENST00000396098.5, ENST00000396099.5, ENST00000404113.6, ENST00000423495.1, ENST00000425416.6, ENST00000441684.5, ENST00000449576.6, ENST00000454151.2, ENST00000460096.1, ENST00000464517.5, ENST00000464953.2, ENST00000475286.1, ENST00000475922.1, ENST00000480315.1, ENST00000487346.1, ENST00000487576.1, ENST00000495907.5, ENST00000674199.1

Found 1271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGACAGCCGCCTTCTGCCTAGGTTTCACAGCCCCAAACTGCACGTaGACCAGTAGCTACTTGCTGGAGCAGGCCGGAAAGGCAGCGTCG +
Preference number: 1 (lower is better)
Translates to: QTAAFCLGFTAPNCT*TSSYLLEQAGKAAS
Trigger: CGACGCTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTCACGTGCAGTTTGGGGCTGTGAAACCTAGGCAGAAGGCGGCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 90 bp CGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATaGGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGTGGCAC +
Preference number: 1 (lower is better)
Translates to: RWRPDFYQRPQIQVT*AFTALPTVFRRWWH
Trigger: GTGCCACCACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 90 bp TCCAAAATTGCATCCTCTGAAAACTCCGCCTGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGCCAACTGCATGAGGGATACATCCCC +
Preference number: 1 (lower is better)
Translates to: SKIASSENSACRVCC*RGLPGCQLHEGYIP
Trigger: GGGGATGTATCCCTCATGCAGTTGGCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCAGGCGGAGTTTTCAGAGGATGCAATTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 90 bp AAATCTGCGATCGATGGCAGATCTGTTTGCCTTTGTGTGTCCACATaGACCATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAAC +
Preference number: 1 (lower is better)
Translates to: KSAIDGRSVCLCVST*TIWQRHPMLTGPTN
Trigger: GTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 90 bp AGCCTTGCCAGGGCTCACATTGAACTTGACACAGATCTGAGAGTGTaGCTTTCTGGAAAGCATGCTCTGTTTCAGGGTGCAGTGATGTGG +
Preference number: 1 (lower is better)
Translates to: SLARAHIELDTDLRV*LSGKHALFQGAVMW
Trigger: CCACATCACTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTTCAATGTGAGCCCTGGCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 90 bp GGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTaGCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCCTGTCC +
Preference number: 1 (lower is better)
Translates to: GGGTNIAIMEMCPLL*QKPCTSGIPRLTLS
Trigger: GGACAGGGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 90 bp TTTGGCATAAGTGTGCTCAAGTCCACACTGTCAGCACCACCTCGCTaGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATACTGC +
Preference number: 1 (lower is better)
Translates to: FGISVLKSTLSAPPR*MEGSRQCQTHSKYC
Trigger: GCAGTATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGACAGTGTGGACTTGAGCACACTTATGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 90 bp AATATGCCAGCCTTGCCAGGGCTCACATTGAACTTGACACAGATCTaGGAGTGTGACTTTCTGGAAAGCATGCTCTGTTTCAGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: NMPALPGLTLNLTQI*ECDFLESMLCFRVQ
Trigger: CTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTTCAATGTGAGCCCTGGCAAGGCTGGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 90 bp CTGTGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTaGCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGA +
Preference number: 1 (lower is better)
Translates to: LCSEGGGTNIAIMEM*PLLCQKPCTSGIPR
Trigger: TCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 90 bp GCAAAAGGGAATCTGCACATGCACATCCGTGTTTCTACAGAAATCTaGGATCGATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAAC +
Preference number: 1 (lower is better)
Translates to: AKGNLHMHIRVSTEI*DRWQICLPLCVHMN
Trigger: GTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGTAGAAACACGGATGTGCATGTGCAGATTCCCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 90 bp AGTTTCTTTGGAGAGCTCCCAACAGAAGTCAGTATCATTATCATTTaGCATAAGTGTGCTCAAGTCCACACTGTCAGCACCACCTCGCTG +
Preference number: 1 (lower is better)
Translates to: SFFGELPTEVSIIII*HKCAQVHTVSTTSL
Trigger: CAGCGAGGTGGTGCTGACAGTGTGGACTTGAGCACACTTATGCCAAATGATAATGATACTGACTTCTGTTGGGAGCTCTCCAAAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 90 bp AATCTGCACATGCACATCCGTGTTTCTACAGAAATCTGCGATCGATaGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCA +
Preference number: 1 (lower is better)
Translates to: NLHMHIRVSTEICDR*QICLPLCVHMNHLA
Trigger: TGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGTAGAAACACGGATGTGCATGTGCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 90 bp AAGGTGAAGTTACTGAAGGTATCCGAACAGGGAAAGTCTGAAGAATaGCTTCTTTTCAGCAACGGGAAAACGTGGTCGACTACTTCACAG +
Preference number: 1 (lower is better)
Translates to: KVKLLKVSEQGKSEE*LLFSNGKTWSTTSQ
Trigger: CTGTGAAGTAGTCGACCACGTTTTCCCGTTGCTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCGGATACCTTCAGTAACTTCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR TCA 90 bp AGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCACATaGCCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAAC +
Preference number: 1 (lower is better)
Translates to: RATLKCVVQIQHSST*PQHHWVIVMYTKIN
Trigger: GTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 90 bp TCACTGGGTTATAGTCATGTACACAAAGATAAACCAACTCGTATATaGGTGAGTGCAGCCCATATACAAATCTCACTTTCAGAAGCCAGA +
Preference number: 1 (lower is better)
Translates to: SLGYSHVHKDKPTRI*VSAAHIQISLSEAR
Trigger: TCTGGCTTCTGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATCTTTGTGTACATGACTATAACCCAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCGCCAGGCTCCCAGGTaGAGCTGTGCACTCCGGGGA +
Preference number: 2 (lower is better)
Translates to: DPVASRFLSETSDPGHMSRQAPR*SCALRG
Trigger: TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCGCCAGGCTCCCAGGTaGAGCTGTGCACTCCGGGGA +
Preference number: 2 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNRQAPR*SCALRG
Trigger: TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCATCCCAGGTGGAGCTGTaGACTCCGGGGAGACCTATC +
Preference number: 2 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSSQVEL*TPGRPI
Trigger: GATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGA...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCACCAGTAGCTACTTGCTaGAGCAGGCCGGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSPVATC*SRPERQ
Trigger: CTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGG...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: HLAKASNANGAHQLQRRQEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAACTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 2 (lower is better)
Translates to: MVQLSDALMGPILPKGGQLSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR TCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACCACAAGGCCAAGTCTaGGGCCAGGCCTGGACCCGG +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPPQGQV*GQAWTR
Trigger: CCGGGTCCAGGCCTGGCCTCAGACTTGGCCTTGTGG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCTCCCAGGTGGAGCTGTaGACTCCGGGGAGACCTATC +
Preference number: 2 (lower is better)
Translates to: PTPSLESAPFLSCLEMSASQVEL*TPGRPI
Trigger: GATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGA...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGGGGCAGGGGAGAAATaGTTCTCAATTCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVGAGEK*FSILSA
Trigger: AGCAGAGAGAATTGAGAAGCATTTCTCCCCTGCCCC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACCACAAGGCCAAGTCTaGGGCCAGGCCTGGACCCGG +
Preference number: 2 (lower is better)
Translates to: DKPTRICVSAAHIQISLSPQGQV*GQAWTR
Trigger: CCGGGTCCAGGCCTGGCCTCAGACTTGGCCTTGTGG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAATGTGCCCCCTACTTTaGCAAAAACCGTGCACATCT +
Preference number: 2 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSMCPLL*QKPCTS
Trigger: AGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CAA 90 bp GATCGATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTaGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGG +
Preference number: 2 (lower is better)
Translates to: DRWQICLPLCVHMNH*AKASNANGAHQLQR
Trigger: CCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGCATTAAGCCACAACTaGGGAATGCTTTTCACGGTA +
Preference number: 2 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSALSHN*GMLFTV
Trigger: TACCGTGAAAAGCATTCCTCAGTTGTGGCTTAATGC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCTGGCATTCCTCGATTaGCCCTGTCCTAGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLLAFLD*PCPRRG
Trigger: TCCCCGCCTAGGACAGGGTCAATCGAGGAATGCCAG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGINQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCGCTCCCTTCCTATCTTaGTTAGAAATGTCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTAPFLS*LEMSAP
Trigger: CGGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGC...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCAGACAGCCGCCTTCTaGCTAGGTTTCACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIQTAAF*LGFTAP
Trigger: TGGGGCTGTGAAACCTAGGCAGAAGGCGGCTGTCTG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCAGACAGCCGCCTTCTaGCTAGGTTTCACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKQTAAF*LGFTAP
Trigger: TGGGGCTGTGAAACCTAGGCAGAAGGCGGCTGTCTG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCATGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGC +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPCRVCC*RGLPGC
Trigger: GCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCA...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPASLAMP*WVQSFP
Trigger: TGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCT...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLNQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGCCACAACTGAGGAATaGTTTTCACGGTACAAATGC +
Preference number: 2 (lower is better)
Translates to: HLAKASNANGAHQLQRRQATTEE*FSRYKC
Trigger: GCATTTGTACCGTGAAAAGCATTCCTCAGTTGTGGC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCTGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGC +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSCRVCC*RGLPGC
Trigger: GCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCA...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCAGATCCAGGTCACATaGGCCTTCACAGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSQIQVT*AFTALP
Trigger: GGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFNQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACCAGTAGCTACTTGCTaGAGCAGGCCGGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPPVATC*SRPERQ
Trigger: CTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCTCAGCACCACCTCGCTaGATGGAAGGAAGCCGGCAG +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSSAPPR*MEGSRQ
Trigger: CTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGA...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 2 (lower is better)
Translates to: MADLFAFVCPHEPFGKGILSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAAGAGGGCTGCCTGGATaGCAACTGCATGAGGGATAC +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPRGLPG*QLHEGY
Trigger: GTATCCCTCATGCAGTTGGCATCCAGGCAGCCCTCT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCAGGCCTGGACCCGGTaGCGTCCAGATTTCTATCAG +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSQAWTR*RPDFYQ
Trigger: CTGATAGAAATCTGGACGCCACCGGGTCCAGGCCTG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGAGGGTGGGCAAAATGTaGCCAAGAGTATCTGATCTG +
Preference number: 2 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQRVGKM*PRVSDL
Trigger: CAGATCAGATACTCTTGGCCACATTTTGCCCACCCT...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR CCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCAATCCTTCCCAAGGGTaGGCAAAATGTGGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSNPSQG*AKCGQE
Trigger: CTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATT...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR CAA 90 bp CAGCCAAAGTTCCTCCTGGGTGCAAAGGAGAAACCGTCTGAACCTTaGCAGGCCCATGAGCTTATACTTAGTTCAGAGCAGTTAAAATTC +
Preference number: 2 (lower is better)
Translates to: QPKFLLGAKEKPSEP*QAHELILSSEQLKF
Trigger: GAATTTTAACTGCTCTGAACTAAGTATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTTTCTCCTTTGCACCCAGGAGGAACTTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 2 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLLSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCTTTGCCAAAAACCGTaGACATCTGGCATTCCTCGA +
Preference number: 2 (lower is better)
Translates to: MADLFAFVCPHEPFGKGILCQKP*TSGIPR
Trigger: TCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCATGCCTGGATGCCAACTaGATGAGGGATACATCCCCC +
Preference number: 2 (lower is better)
Translates to: DKPTRICVSAAHIQISLSCLDAN*MRDTSP
Trigger: GGGGGATGTATCCCTCATGCAGTTGGCATCCAGGCA...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAAGGCAGGTGTTAATATaGCAGCCTTGCCAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPRQVLI*QPCQGS
Trigger: TGAGCCCTGGCAAGGCTGGCATATTAACACCTGCCT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGTCAATCACTTCTCTGTaGAGGGCAGAGAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQSITSL*RAEKRL
Trigger: CAGCCTCTTCTCTGCCCTGCACAGAGAAGTGATTGA...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR CCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGATGTCCGCCATCCCGATaGCACGGGCAGAACAGTAGA +
Preference number: 2 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRCPPSR*HGQNSR
Trigger: TCTACTGTTCTGCCCGTGCCATCGGGATGGCGGACA...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR CAA 90 bp CGTGTTTCTACAGAAATCTGCGATCGATGGCAGATCTGTTTGCCTTaGTGTGTCCACATGAACCATTTGGCAAAGGCATCCAATGCTAAC +
Preference number: 2 (lower is better)
Translates to: RVSTEICDRWQICLP*CVHMNHLAKASNAN
Trigger: GTTAGCATTGGATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGTAGAAACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CAA 90 bp CACATCCGTGTTTCTACAGAAATCTGCGATCGATGGCAGATCTGTTaGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCAAT +
Preference number: 2 (lower is better)
Translates to: HIRVSTEICDRWQIC*PLCVHMNHLAKASN
Trigger: ATTGGATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGTAGAAACACGGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCTCCTACTTGCTTGTATaGATACACATCAGCTGGTCG +
Preference number: 2 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCSYLLV*IHISWS
Trigger: CGACCAGCTGATGTGTATTCATACAAGCAAGTAGGA...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCTTCTCAATTCTCTCTaGTGTCAGGCCAATGATGAC +
Preference number: 2 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKLLNSL*CQANDD
Trigger: GTCATCATTGGCCTGACAGCAGAGAGAATTGAGAAG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGCCACAACTGAGGAATaGTTTTCACGGTACAAATGC +
Preference number: 2 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIATTEE*FSRYKC
Trigger: GCATTTGTACCGTGAAAAGCATTCCTCAGTTGTGGC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCAGGCAGGTGTTAATATaGCAGCCTTGCCAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSRQVLI*QPCQGS
Trigger: TGAGCCCTGGCAAGGCTGGCATATTAACACCTGCCT...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCACCAACCAGTTTCTTTaGAGAGCTCCCAACAGAAGT +
Preference number: 2 (lower is better)
Translates to: MADLFAFVCPHEPFGKGITNQFL*RAPNRS
Trigger: ACTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGT...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSLSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCGCTTGCCCTTAATTTaGGTGGAAAAAGCTAAGGAA +
Preference number: 2 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIRLPLI*VEKAKE
Trigger: TTCCTTAGCTTTTTCCACTCAAATTAAGGGCAAGCG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAAAAACCGTGCACATCTaGCATTCCTCGATTGACCCT +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPKTVHI*HSSIDP
Trigger: AGGGTCAATCGAGGAATGCCAGATGTGCACGGTTTT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCAGCCAAAGTTCCTCCTaGGTGCAAAGGAGAAACCGT +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSSQSSS*VQRRNR
Trigger: ACGGTTTCTCCTTTGCACCCAGGAGGAACTTTGGCT...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGCTATAATGGAAATGTaGCCCCTACTTTGCCAAAAA +
Preference number: 2 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIAIMEM*PLLCQK
Trigger: TTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAACTTTCTGGAAAGCATaGTCTGTTTCAGGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPTFWKA*SVSGCS
Trigger: ACTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAGAAATCTGCGATCGATaGCAGATCTGTTTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPEICDR*QICLPL
Trigger: CAAAGGCAAACAGATCTGCCATCGATCGCAGATTTC...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCAACTCGTATATGCGTaGGTGCAGCCCATATACAAA +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSQLVYA*VQPIYK
Trigger: TTTGTATATGGGCTGCACTCACGCATATACGAGTTG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACTTCTCAATTCTCTCTaGTGTCAGGCCAATGATGAC +
Preference number: 2 (lower is better)
Translates to: DKPTRICVSAAHIQISLSLLNSL*CQANDD
Trigger: GTCATCATTGGCCTGACAGCAGAGAGAATTGAGAAG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAAAGGGAATCTGCACATaGACATCCGTGTTTCTACAG +
Preference number: 2 (lower is better)
Translates to: DKPTRICVSAAHIQISLSKGICT*TSVFLQ
Trigger: CTGTAGAAACACGGATGTGCATGTGCAGATTCCCTT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACTGCAAAAGGGAATCTaGACATGCACATCCGTGTTT +
Preference number: 2 (lower is better)
Translates to: DKPTRICVSAAHIQISLSLQKGI*TCTSVF
Trigger: AAACACGGATGTGCATGTGCAGATTCCCTTTTGCAG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAGAGAGTGTGACTTTCTaGAAAGCATGCTCTGTTTCA +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPESVTF*KACSVS
Trigger: TGAAACAGAGCATGCTTTCCAGAAAGTCACACTCTC...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCGCTTGCCCTTAATTTaGGTGGAAAAAGCTAAGGAA +
Preference number: 2 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSRLPLI*VEKAKE
Trigger: TTCCTTAGCTTTTTCCACTCAAATTAAGGGCAAGCG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAAACTTGACACAGATCTaGGAGTGTGACTTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: DKPTRICVSAAHIQISLSNLTQI*ECDFLE
Trigger: TTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR TCA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGGAAAAACAGGTTTTTaGTGTCTGTCAAACACTGGA +
Preference number: 2 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFGKTGF*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAAAACCTGTTTTTCC...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAGCTATAATGGAAATGTaGCCCCTACTTTGCCAAAAA +
Preference number: 2 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPAIMEM*PLLCQK
Trigger: TTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CCA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTAATTTATATCCATTCTaGCTCACTTTATGGTACAGC +
Preference number: 2 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFNLYPF*LTLWYS
Trigger: GCTGTACCATAAAGTGAGCCAGAATGGATATAAATT...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR GCA 72 bp AAAACTCCGCCTGCAGGGTGTGCTGCTGCAGAGGGCTaGCTGGATGCCAACTGCATGAGGGATACATCCCCC +
Preference number: 3 (lower is better)
Translates to: KTPPAGCAAAEG*LDANCMRDTSP
Trigger: GGGGGATGTATCCCTCATGCAGTTGGCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCAGGCGGAGTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 72 bp GCATCCTCTGAAAACTCCGCCTGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGCCAACTGCATGAGGGA +
Preference number: 3 (lower is better)
Translates to: ASSENSACRVCC*RGLPGCQLHEG
Trigger: TCCCTCATGCAGTTGGCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCAGGCGGAGTTTTCAGAGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 72 bp GGGTGGGGCAGGGGAGAAATGCTTCTCAATTCTCTCTaGTGTCAGGCCAATGATGACGCGCCAGGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: GWGRGEMLLNSL*CQANDDAPGSQ
Trigger: CTGGGAGCCTGGCGCGTCATCATTGGCCTGACAGCAGAGAGAATTGAGAAGCATTTCTCCCCTGCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 72 bp GCTGTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTaGAGCTGTGCACTCCGGGGAGACCTATCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: AVRPMMTRQAPR*SCALRGDLSFN
Trigger: ATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 72 bp TCACAGCCCCAAACTGCACGTGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGGCAGCGTCGTAACTGG +
Preference number: 3 (lower is better)
Translates to: SQPQTAREPVAT*WSRPERQRRNW
Trigger: CCAGTTACGACGCTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTCACGTGCAGTTTGGGGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 72 bp CAGCCCCAAACTGCACGTGAACCAGTAGCTACTTGCTaGAGCAGGCCGGAAAGGCAGCGTCGTAACTGGCAT +
Preference number: 3 (lower is better)
Translates to: QPQTAREPVATC*SRPERQRRNWH
Trigger: ATGCCAGTTACGACGCTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTCACGTGCAGTTTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp GCCTTCTGCCTAGGTTTCACAGCCCCAAACTGCACGTaGACCAGTAGCTACTTGCTGGAGCAGGCCGGAAAG +
Preference number: 3 (lower is better)
Translates to: AFCLGFTAPNCT*TSSYLLEQAGK
Trigger: CTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTCACGTGCAGTTTGGGGCTGTGAAACCTAGGCAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp TTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTaGCCCTGTCCTAGGCGGGGACAGCCCTCAGACAGC +
Preference number: 3 (lower is better)
Translates to: FAKNRAHLAFLD*PCPRRGQPSDS
Trigger: GCTGTCTGAGGGCTGTCCCCGCCTAGGACAGGGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 72 bp AGTGTGCTCAAGTCCACACTGTCAGCACCACCTCGCTaGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCA +
Preference number: 3 (lower is better)
Translates to: SVLKSTLSAPPR*MEGSRQCQTHS
Trigger: TGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGACAGTGTGGACTTGAGCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp CCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATaGGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: PDFYQRPQIQVT*AFTALPTVFRR
Trigger: CCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTGCTCCCTTCCTATCTaGCTTAGAAATGTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTCSLPI*LRNVSP
Trigger: GGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGCA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp GGTACATCAAAATTCGGGATCCAAAATTGCATCCTCTaGAAACTCCGCCTGCAGGGTGTGCTGCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: GTSKFGIQNCIL*KLRLQGVLLQR
Trigger: CCTCTGCAGCAGCACACCCTGCAGGCGGAGTTTTCAGAGGATGCAATTTTGGATCCCGAATTTTGATGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 72 bp TGCTCAAGTCCACACTGTCAGCACCACCTCGCTGGATaGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAAT +
Preference number: 3 (lower is better)
Translates to: CSSPHCQHHLAG*KEAGSVKLIQN
Trigger: ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGACAGTGTGGACTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 72 bp TCCTCCTGGGTGCAAAGGAGAAACCGTCTGAACCTTTaGAGGCCCATGAGCTTATACTTAGTTCAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: SSWVQRRNRLNL*RPMSLYLVQSS
Trigger: ACTGCTCTGAACTAAGTATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTTTCTCCTTTGCACCCAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp ATCGATGGCAGATCTGTTTGCCTTTGTGTGTCCACATaGACCATTTGGCAAAGGCATCCAATGCTAACGGGG +
Preference number: 3 (lower is better)
Translates to: IDGRSVCLCVST*TIWQRHPMLTG
Trigger: CCCCGTTAGCATTGGATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp GCCTTGCCAGGGCTCACATTGAACTTGACACAGATCTaGGAGTGTGACTTTCTGGAAAGCATGCTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: ALPGLTLNLTQI*ECDFLESMLCF
Trigger: GAAACAGAGCATGCTTTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTTCAATGTGAGCCCTGGCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 72 bp GGAGAGCTCCCAACAGAAGTCAGTATCATTATCATTTaGCATAAGTGTGCTCAAGTCCACACTGTCAGCACC +
Preference number: 3 (lower is better)
Translates to: GELPTEVSIIII*HKCAQVHTVST
Trigger: GGTGCTGACAGTGTGGACTTGAGCACACTTATGCCAAATGATAATGATACTGACTTCTGTTGGGAGCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CAA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCATAAATATTCCAGCCTaGAGCCACAAAAACTGGGGG +
Preference number: 3 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIINIPA*SHKNWG
Trigger: CCCCCAGTTTTTGTGGCTCAAGGCTGGAATATTTAT...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CAA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGACATACGAAGAGATGTaGGTCTTTGCATGTTCCTGT +
Preference number: 3 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQTYEEM*VFACSC
Trigger: ACAGGAACATGCAAAGACCAACATCTCTTCGTATGT...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR GCA 72 bp AATCTGCACATGCACATCCGTGTTTCTACAGAAATCTaGGATCGATGGCAGATCTGTTTGCCTTTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: NLHMHIRVSTEI*DRWQICLPLCV
Trigger: GACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGTAGAAACACGGATGTGCATGTGCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 72 bp ATGCACATCCGTGTTTCTACAGAAATCTGCGATCGATaGCAGATCTGTTTGCCTTTGTGTGTCCACATGAAC +
Preference number: 3 (lower is better)
Translates to: MHIRVSTEICDR*QICLPLCVHMN
Trigger: GTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGTAGAAACACGGATGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CCA 72 bp TCTGAAGAATGGCTTCTTTTCAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGTCTCACATACGAAGAG +
Preference number: 3 (lower is better)
Translates to: SEEWLLFSNGKT*STTSQSLTYEE
Trigger: CTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCTGAAAAGAAGCCATTCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR CCA 72 bp TTACTGAAGGTATCCGAACAGGGAAAGTCTGAAGAATaGCTTCTTTTCAGCAACGGGAAAACGTGGTCGACT +
Preference number: 3 (lower is better)
Translates to: LLKVSEQGKSEE*LLFSNGKTWST
Trigger: AGTCGACCACGTTTTCCCGTTGCTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCGGATACCTTCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCGATGGCAGATCTGTTaGCCTTTGTGTGTCCACATG +
Preference number: 3 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSRWQIC*PLCVHM
Trigger: CATGTGGACACACAAAGGCAAACAGATCTGCCATCG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CAA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCGGGAAAAACAGGTTTTaGATGTCTGTCAAACACTGG +
Preference number: 3 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAAAACCTGTTTTTCCC...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR-3UTR CAA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGAGCTCTCCTTTAGGGTaGACGGTAAATATTCTATTC +
Preference number: 3 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQSSPLG*TVNILF
Trigger: GAATAGAATATTTACCGTCAACCCTAAAGGAGAGCT...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR GCA 72 bp ACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTaGCAAAAACCGTGCACATCTGGCATTCCTCGATTG +
Preference number: 3 (lower is better)
Translates to: TNIAIMEMCPLL*QKPCTSGIPRL
Trigger: CAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGCAATGTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACAGATCTGTTTGCCTTaGTGTGTCCACATGAACCAT +
Preference number: 3 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPQICLP*CVHMNH
Trigger: ATGGTTCATGTGGACACACAAAGGCAAACAGATCTG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp GACTTTCTGGAAAGCATGCTCTGTTTCAGGGTGCAGTaGTGTGGAAGTTTAAGGTACATCAAAATTCGGGAT +
Preference number: 3 (lower is better)
Translates to: DFLESMLCFRVQ*CGSLRYIKIRD
Trigger: ATCCCGAATTTTGATGTACCTTAAACTTCCACATCACTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp TTGAAATGTGTGGTCCAAATACAGCATTCCAGCACATaGCCTCAGCATCACTGGGTTATAGTCATGTACACA +
Preference number: 3 (lower is better)
Translates to: LKCVVQIQHSST*PQHHWVIVMYT
Trigger: TGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTGGAATGCTGTATTTGGACCACACATTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR TCA 72 bp GTCATGTACACAAAGATAAACCAACTCGTATATGCGTaGGTGCAGCCCATATACAAATCTCACTTTCAGAAG +
Preference number: 3 (lower is better)
Translates to: VMYTKINQLVYA*VQPIYKSHFQK
Trigger: CTTCTGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATCTTTGTGTACATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR GCA 72 bp TTGACGGTAAATATTCTATTCAAAGACACTCCTACTTaGTTGTATGAATACACATCAGCTGGTCGGTTTCCA +
Preference number: 3 (lower is better)
Translates to: LTVNILFKDTPT*LYEYTSAGRFP
Trigger: TGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR GCA 72 bp TATAGTCATGTACACAAAGATAAACCAACTCGTATATaGGTGAGTGCAGCCCATATACAAATCTCACTTTCA +
Preference number: 3 (lower is better)
Translates to: YSHVHKDKPTRI*VSAAHIQISLS
Trigger: TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATCTTTGTGTACATGACTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGACGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGRGLVG*PGSVVA
Trigger: AGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCG...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAGCGATCACTTGGGCTaGCGTGCTGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSDHLG*RAGVQA
Trigger: GGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATCACTTGGGCTGGCGTaGTGGGGTCCAGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSLGLA*WGPGLS
Trigger: TGAGAGGCCTGGACCCCAGCACGCCAGCCCAAGTGA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAGCAGGCTGGGCCACTaGTGGGTGGCTGCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSRLGH*WVAAVR
Trigger: CCTAACAGCAGCCACCCAGCAGTGGCCCAGCCTGCT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGAGCGGCGCCGCGCGTaGCCGCCTTTGTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGERRRA*PPLYCK
Trigger: TTTGCAATACAAAGGCGGCCACGCGCGGCGCCGCTC...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATACTACAGAGCTGCTTaGCGGCGTCTCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGYYRAA*RRLAGS
Trigger: GCTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGAAGACTTAGCAGCCTaGGGCAGCTCTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGEDLAA*GSSPHS
Trigger: GCTGTGGGGAGAGCTGCCGCAGGCTGCTAAGTCTTC...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATCAGCACCACCTCGCTaGATGGAAGGAAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSAPPR*MEGSRQ
Trigger: CTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCCCTGGTGGCCAAGCTaGGCTGCGGCGGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDPWWPS*AAAVAL
Trigger: GAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTGTCCACGCCCGAGCTaGCCACCGACTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDCPRPS*PPTAGT
Trigger: AGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCGCCAGGCTCCCAGGTaGAGCTGTGCACTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDRQAPR*SCALRG
Trigger: TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQARGLVG*PGSVVA
Trigger: AGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATCTCCCGGTGGTCGCTaGGGCCCCCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSPGGR*GPRRGR
Trigger: TCTCCCTCTGCGGGGGCCTCAGCGACCACCGGGAGA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCCCTGGTGGCCAAGCTaGGCTGCGGCGGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALPWWPS*AAAVAL
Trigger: GAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCTGAGCTGCGGCGGTTaGTCTCCGGTGCTATGGGCC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDLSCGG*SPVLWA
Trigger: GGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATCTCCCTCTCCAGCTTaGTTTCATCCATGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSPSPA*FHPCPA
Trigger: CGCAGGGCATGGATGAAAGCAAGCTGGAGAGGGAGA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHTDCGD*LADRAP
Trigger: CGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQATDCGD*LADRAP
Trigger: CGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGT...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALTDCGD*LADRAP
Trigger: CGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGT...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQRGLVG*PGSVVA
Trigger: AGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSRGLVG*PGSVVA
Trigger: AGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGAGGTGGCCTGCGTTTaGTGGCTTGGCAGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCEVACV*WLGSCA
Trigger: CGCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGAGGTGGCCTGCGTTTaGTGGCTTGGCAGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALEVACV*WLGSCA
Trigger: CGCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACCACAAGGCCAAGTCTaGGGCCAGGCCTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQPQGQV*GQAWTR
Trigger: CCGGGTCCAGGCCTGGCCTCAGACTTGGCCTTGTGG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATCTTTACTACAGAGCTaGTTGACGGCGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSLLQS*LTASRW
Trigger: CCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAAGA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGTCGCTTGCATGTTTTaGGAGTCCGGAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGVACMF*ESGRIS
Trigger: GGAGATCCTTCCGGACTCGCAAAACATGCAAGCGAC...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGAGCTGCCCACCGACTaGGGGGACTGGTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQELPTD*GDWLAD
Trigger: GTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATGTCCACGCCCGAGCTaGCCACCGACTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQCPRPS*PPTAGT
Trigger: AGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCTGAGCTGCGGCGGTTaGTCTCCGGTGCTATGGGCC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQLSCGG*SPVLWA
Trigger: GGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGTGGCCAAGCTGAGCTaGGGCGGTTGCTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCVAKLS*GGCSPV
Trigger: CACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCAC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGACTGCTGGCAAGAGGCTaGTTGGGACATTTTACGCTG +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGLLARG*LGHFTL
Trigger: CAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAGCAG...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGGGGAGCTCTTGCCCTaGGAGGTCTCCCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHGELLP*EVSQLE
Trigger: CTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCC...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTTGGGCTGGCGTGCTaGGGTCCAGGCCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLGLAC*GPGLSS
Trigger: GGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCTTGGGCTGGCGTGCTaGGGTCCAGGCCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQLGLAC*GPGLSS
Trigger: GGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTTGGGCTGGCGTGCTaGGGTCCAGGCCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALGLAC*GPGLSS
Trigger: GGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAGCGATCACTTGGGCTaGCGTGCTGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHSDHLG*RAGVQA
Trigger: GGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVTDCGD*LADRAP
Trigger: CGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQETDCGD*LADRAP
Trigger: CGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTTCGTGATCTCCCGGTaGTCGCTGAGGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALFVISR*SLRPPQ
Trigger: CTGCGGGGGCCTCAGCGACCACCGGGAGATCACGAA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATTCTCCCGGTGGTCGCTaGGGCCCCCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNSPGGR*GPRRGR
Trigger: TCTCCCTCTGCGGGGGCCTCAGCGACCACCGGGAGA...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGCCCTGGTGGCCAAGCTaGGCTGCGGCGGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLPWWPS*AAAVAL
Trigger: GAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGG...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAGGTGGCCTGCGTTTaGTGGCTTGGCAGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSEVACV*WLGSCA
Trigger: CGCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTCACTTGGGCTGGCGTaGTGGGGTCCAGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWSLGLA*WGPGLS
Trigger: TGAGAGGCCTGGACCCCAGCACGCCAGCCCAAGTGA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTGCCCACCGACTaGGGGGACTGGTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQELPTD*GDWLAD
Trigger: GTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGAGCTGCCCACCGACTaGGGGGACTGGTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEELPTD*GDWLAD
Trigger: GTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTCAGCCCGTCCGAGGTaGTCTCCACGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHSARPR*SPRHCP
Trigger: TGGACAGTGGCGTGGAGAGCACCTCGGACGGGCTGA...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTCAGCCCGTCCGAGGTaGTCTCCACGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQASARPR*SPRHCP
Trigger: TGGACAGTGGCGTGGAGAGCACCTCGGACGGGCTGA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCGGTTGCTCTCCGGTaGTATGGGCCTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQAVALR*YGPCQP
Trigger: TGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGCGGTTGCTCTCCGGTaGTATGGGCCTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALAVALR*YGPCQP
Trigger: TGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGTGGCCAAGCTGAGCTaGGGCGGTTGCTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQVAKLS*GGCSPV
Trigger: CACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCAC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGTGGCCAAGCTGAGCTaGGGCGGTTGCTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSVAKLS*GGCSPV
Trigger: CACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCAC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGTGGCCAAGCTGAGCTaGGGCGGTTGCTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEVAKLS*GGCSPV
Trigger: CACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCAC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGACTGGAGGATGATTCATaGTTTACCCTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGLEDDS*FTLVAK
Trigger: CTTGGCCACCAGGGTAAAGCATGAATCATCCTCCAG...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGGGCAGAGAAGAGGCTaGTGGGACTCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALGQRRG*WDSAAG
Trigger: CCCTGCTGCTGAGTCCCAGCAGCCTCTTCTCTGCCC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGGGCAGAGAAGAGGCTaGTGGGACTCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNGQRRG*WDSAAG
Trigger: CCCTGCTGCTGAGTCCCAGCAGCCTCTTCTCTGCCC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTCCCAGGTGGAGCTGTaGACTCCGGGGAGACCTATC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDSQVEL*TPGRPI
Trigger: GATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNCRVCC*RGLPGC
Trigger: GCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAGCAGGCTGGGCCACTaGTGGGTGGCTGCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWSRLGH*WVAAVR
Trigger: CCTAACAGCAGCCACCCAGCAGTGGCCCAGCCTGCT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCCCGCCCTGTATGGTaGTGTCTGCCTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQARPVW*CLPPHP
Trigger: TGGGTGAGGAGGCAGACAGCACCATACAGGGCGGGC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAGCTGGAGCTGCGAATaGCGTCCTGTTCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDSWSCE*RPVPPW
Trigger: CCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCTTGGGCTGGCGTGCTaGGGTCCAGGCCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSLGLAC*GPGLSS
Trigger: GGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAGCGATCACTTGGGCTaGCGTGCTGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSSDHLG*RAGVQA
Trigger: GGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAGCGATCACTTGGGCTaGCGTGCTGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSDHLG*RAGVQA
Trigger: GGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHTAGTG*LTGLRC
Trigger: ACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWTAGTG*LTGLRC
Trigger: ACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCTTCGTGATCTCCCGGTaGTCGCTGAGGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSFVISR*SLRPPQ
Trigger: CTGCGGGGGCCTCAGCGACCACCGGGAGATCACGAA...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTTCGTGATCTCCCGGTaGTCGCTGAGGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEFVISR*SLRPPQ
Trigger: CTGCGGGGGCCTCAGCGACCACCGGGAGATCACGAA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAACGCCAGGCTCCCAGGTaGAGCTGTGCACTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQRQAPR*SCALRG
Trigger: TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCG...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCACCACCTCGCTGGATaGAAGGAAGCCGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDHHLAG*KEAGSV
Trigger: GACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTTAGGACAGGCATaGCTGGCCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALLGQA*LAPVLP
Trigger: GGGCAAGACCGGGGCCAGCCATGCCTGTCCTAACAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCTGTTAGGACAGGCATaGCTGGCCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWLLGQA*LAPVLP
Trigger: GGGCAAGACCGGGGCCAGCCATGCCTGTCCTAACAG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCGTCCTGTTCCCCCATaGCCCGCCCTGTATGGTGCT +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCRPVPP*PALYGA
Trigger: AGCACCATACAGGGCGGGCCATGGGGGAACAGGACG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGCGAGGTCTCCCAGCTaGAGCTGCGAATGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCARSPS*SCECRP
Trigger: AGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR TCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTACTACAGAGCTGCTTaGCGGCGTCTCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCYYRAA*RRLAGS
Trigger: GCTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTA...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCCCTGGTGGCCAAGCTaGGCTGCGGCGGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNPWWPS*AAAVAL
Trigger: GAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCTGGCATTCCTCGATTaGCCCTGTCCTAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNLAFLD*PCPRRG
Trigger: TCCCCGCCTAGGACAGGGTCAATCGAGGAATGCCAG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCAGATCCAGGTCACATaGGCCTTCACAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQQIQVT*AFTALP
Trigger: GGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCAGATCCAGGTCACATaGGCCTTCACAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAQIQVT*AFTALP
Trigger: GGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCCCACAAGGCCAAGTCTaGGGCCAGGCCTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTPQGQV*GQAWTR
Trigger: CCGGGTCCAGGCCTGGCCTCAGACTTGGCCTTGTGG...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATCACTTGGGCTGGCGTaGTGGGGTCCAGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSLGLA*WGPGLS
Trigger: TGAGAGGCCTGGACCCCAGCACGCCAGCCCAAGTGA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGAAGACTTAGCAGCCTaGGGCAGCTCTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWEDLAA*GSSPHS
Trigger: GCTGTGGGGAGAGCTGCCGCAGGCTGCTAAGTCTTC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAGAATCCGTCTTGTTTaGTGTCTGGACTACACTGGC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGRIRLV*CLDYTG
Trigger: GCCAGTGTAGTCCAGACAGCAAACAAGACGGATTCT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCGGTGCTATGGGCCTTaGCAGCCAAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALRCYGP*QPSTAL
Trigger: CAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCGGTGCTATGGGCCTTaGCAGCCAAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHRCYGP*QPSTAL
Trigger: CAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCGGTGCTATGGGCCTTaGCAGCCAAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNRCYGP*QPSTAL
Trigger: CAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCGGTGCTATGGGCCTTaGCAGCCAAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQRCYGP*QPSTAL
Trigger: CAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGCGGTTGCTCTCCGGTaGTATGGGCCTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQAVALR*YGPCQP
Trigger: TGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGCTGAGCTGCGGCGGTTaGTCTCCGGTGCTATGGGCC +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLLSCGG*SPVLWA
Trigger: GGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAG...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGGGCAGAGAAGAGGCTaGTGGGACTCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEGQRRG*WDSAAG
Trigger: CCCTGCTGCTGAGTCCCAGCAGCCTCTTCTCTGCCC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGGGCAGAGAAGAGGCTaGTGGGACTCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSGQRRG*WDSAAG
Trigger: CCCTGCTGCTGAGTCCCAGCAGCCTCTTCTCTGCCC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDNQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGCTGCTGCAGAGGGCTaGCTGGATGCCAACTGCATG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNAAAEG*LDANCM
Trigger: CATGCAGTTGGCATCCAGGCAGCCCTCTGCAGCAGC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCATGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSCRVCC*RGLPGC
Trigger: GCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCA...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQCRVCC*RGLPGC
Trigger: GCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTCCCTCGGCCGCAACTaGAAGATGAGGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQASLGRN*KMRGSP
Trigger: AGGACTGCCCCTCATCTTGCAGTTGCGGCCGAGGGA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTCCCTCGGCCGCAACTaGAAGATGAGGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHSLGRN*KMRGSP
Trigger: AGGACTGCCCCTCATCTTGCAGTTGCGGCCGAGGGA...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGCCCCACGTAATTCATaGTCTGCACCGAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSAPRNS*SAPSGA
Trigger: GGCGCCGCTCGGTGCAGACCATGAATTACGTGGGGC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTGCACCCTGAGAGTGTaGCGGGATTCAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDCTLRV*RDSAPC
Trigger: ACAAGGGGCTGAATCCCGCCACACTCTCAGGGTGCA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGTTGACGGCGTCTCGCTaGGAGCGATCACTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQLTASR*ERSLGL
Trigger: CAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAA...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTTGACGGCGTCTCGCTaGGAGCGATCACTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNLTASR*ERSLGL
Trigger: CAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGGAACCGGAAGGACTaGGAGTGGGTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGNRKD*EWVTTL
Trigger: GAGAGTGGTCACCCACTCCCAGTCCTTCCGGTTCCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000425416.6
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQTAGTG*LTGLRC
Trigger: ACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTGCTCTCCGGTGCTATaGGCCTTGCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWCSPVL*ALPAKH
Trigger: GTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCTGCGTTTGATGGCTTaGCAGCTGCGCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDLRLMA*QLRAPH
Trigger: ATGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCAGCGGCACGTGCCTTaGTACTGCGTGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCQRHVP*YCVVTL
Trigger: CAGTGTCACCACGCAGTACCAAGGCACGTGCCGCTG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCAGCGGCACGTGCCTTaGTACTGCGTGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAQRHVP*YCVVTL
Trigger: CAGTGTCACCACGCAGTACCAAGGCACGTGCCGCTG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAGGGTGGGCAAAATGTaGCCAAGAGTATCTGATCTG +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGRVGKM*PRVSDL
Trigger: CAGATCAGATACTCTTGGCCACATTTTGCCCACCCT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATTCTGGCTCACTTTATaGTACAGCTTAGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGFWLTL*YSLAMP
Trigger: GGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSNGKT*STTSQS
Trigger: ACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCACCTCGCTGGATaGAAGGAAGCCGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALHHLAG*KEAGSV
Trigger: GACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCACCACCTCGCTGGATaGAAGGAAGCCGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWHHLAG*KEAGSV
Trigger: GACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTCAGCACCACCTCGCTaGATGGAAGGAAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNSAPPR*MEGSRQ
Trigger: CTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTCAGCACCACCTCGCTaGATGGAAGGAAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCSAPPR*MEGSRQ
Trigger: CTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGA...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCCAGGCTACTGGGAGTaGGTGACCACTCTCTATCCG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDPGYWE*VTTLYP
Trigger: CGGATAGAGAGTGGTCACCCACTCCCAGTAGCCTGG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGATGGCCCGCCCTGTATaGTGCTGTCTGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWMARPV*CCLPPH
Trigger: GTGAGGAGGCAGACAGCACCATACAGGGCGGGCCAT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR TCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACAGAGCTCCTTCACGGTaGCAAACACCTGGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNRAPSR*QTPGRL
Trigger: TAGCCGGCCAGGTGTTTGTCACCGTGAAGGAGCTCT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAGAGCTCCTTCACGGTaGCAAACACCTGGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWRAPSR*QTPGRL
Trigger: TAGCCGGCCAGGTGTTTGTCACCGTGAAGGAGCTCT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGAGAGCTCCTTCACGGTaGCAAACACCTGGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALRAPSR*QTPGRL
Trigger: TAGCCGGCCAGGTGTTTGTCACCGTGAAGGAGCTCT...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTACTACAGAGCTGCTTaGCGGCGTCTCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEYYRAA*RRLAGS
Trigger: GCTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGTCACTAAAAGTGTCTaGAGATTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGVTKSV*RFAVNG
Trigger: GCCATTCACAGCGAATCTTCAGACACTTTTAGTGAC...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAACTGCATTTCTGTCTaGGGCTTGTTCTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGNCISV*GLFWSK
Trigger: TTTGGACCAGAACAAGCCTCAGACAGAAATGCAGTT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATTGTCCACAAACTGTTaGTATGACACAGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGLSTNC*YDTACS
Trigger: GGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGAGGTGGCCTGCGTTTaGTGGCTTGGCAGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNEVACV*WLGSCA
Trigger: CGCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCTGGCATTCCTCGATTaGCCCTGTCCTAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSLAFLD*PCPRRG
Trigger: TCCCCGCCTAGGACAGGGTCAATCGAGGAATGCCAG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGCCGCAACTGCAAGATaGGGGGCAGTCCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDAATAR*GAVLLQ
Trigger: TTGCAAAAGGACTGCCCCTCATCTTGCAGTTGCGGC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGAAGACTTAGCAGCCTaGGGCAGCTCTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVEDLAA*GSSPHS
Trigger: GCTGTGGGGAGAGCTGCCGCAGGCTGCTAAGTCTTC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGAAGACTTAGCAGCCTaGGGCAGCTCTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEEDLAA*GSSPHS
Trigger: GCTGTGGGGAGAGCTGCCGCAGGCTGCTAAGTCTTC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGTGGCCAAGCTGAGCTaGGGCGGTTGCTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNVAKLS*GGCSPV
Trigger: CACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCAC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTCCACAGATAGATGGTaGCCTCACAGCGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNSTDRW*PHSGTC
Trigger: GCACGTGCCGCTGTGAGGGCACCATCTATCTGTGGA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTCCACAGATAGATGGTaGCCTCACAGCGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCSTDRW*PHSGTC
Trigger: GCACGTGCCGCTGTGAGGGCACCATCTATCTGTGGA...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTCCACAGATAGATGGTaGCCTCACAGCGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWSTDRW*PHSGTC
Trigger: GCACGTGCCGCTGTGAGGGCACCATCTATCTGTGGA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQNQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCAGACAGCCGCCTTCTaGCTAGGTTTCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHQTAAF*LGFTAP
Trigger: TGGGGCTGTGAAACCTAGGCAGAAGGCGGCTGTCTG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTGCCTGGATGCCAACTaGATGAGGGATACATCCCCC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDCLDAN*MRDTSP
Trigger: GGGGGATGTATCCCTCATGCAGTTGGCATCCAGGCA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGCTGCTGCAGAGGGCTaGCTGGATGCCAACTGCATG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEAAAEG*LDANCM
Trigger: CATGCAGTTGGCATCCAGGCAGCCCTCTGCAGCAGC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAATCCCTCGGCCGCAACTaGAAGATGAGGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQSLGRN*KMRGSP
Trigger: AGGACTGCCCCTCATCTTGCAGTTGCGGCCGAGGGA...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATCTCCCAGCTGGAGCTaGGAATGCCGTCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSPSWS*ECRPVP
Trigger: GGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGAGCGGCGCCGCGCGTaGCCGCCTTTGTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQERRRA*PPLYCK
Trigger: TTTGCAATACAAAGGCGGCCACGCGCGGCGCCGCTC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGTGCACCCTGAGAGTGTaGCGGGATTCAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQCTLRV*RDSAPC
Trigger: ACAAGGGGCTGAATCCCGCCACACTCTCAGGGTGCA...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTGCACCCTGAGAGTGTaGCGGGATTCAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNCTLRV*RDSAPC
Trigger: ACAAGGGGCTGAATCCCGCCACACTCTCAGGGTGCA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTGCACCCTGAGAGTGTaGCGGGATTCAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQACTLRV*RDSAPC
Trigger: ACAAGGGGCTGAATCCCGCCACACTCTCAGGGTGCA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCAGCGATCACTTGGGCTaGCGTGCTGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTSDHLG*RAGVQA
Trigger: GGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCATTGACGGCGTCTCGCTaGGAGCGATCACTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSLTASR*ERSLGL
Trigger: CAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAA...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTTCGTGATCTCCCGGTaGTCGCTGAGGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTFVISR*SLRPPQ
Trigger: CTGCGGGGGCCTCAGCGACCACCGGGAGATCACGAA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGTGCTCTCCGGTGCTATaGGCCTTGCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVCSPVL*ALPAKH
Trigger: GTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCA...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATGCTCTCCGGTGCTATaGGCCTTGCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQCSPVL*ALPAKH
Trigger: GTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTGCGTTTGATGGCTTaGCAGCTGCGCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLRLMA*QLRAPH
Trigger: ATGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGGCAGAAGAGGGAGGTaGCCTGCGTTTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQGRRGR*PAFDGL
Trigger: CAAGCCATCAAACGCAGGCCACCTCCCTCTTCTGCC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGCAGAAGAGGGAGGTaGCCTGCGTTTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGRRGR*PAFDGL
Trigger: CAAGCCATCAAACGCAGGCCACCTCCCTCTTCTGCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGTCCGCCATCCCGATaGCACGGGCAGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCCPPSR*HGQNSR
Trigger: TCTACTGTTCTGCCCGTGCCATCGGGATGGCGGACA...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTGTCCGCCATCCCGATaGCACGGGCAGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQACPPSR*HGQNSR
Trigger: TCTACTGTTCTGCCCGTGCCATCGGGATGGCGGACA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTGTCCGCCATCCCGATaGCACGGGCAGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNCPPSR*HGQNSR
Trigger: TCTACTGTTCTGCCCGTGCCATCGGGATGGCGGACA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCCAGTAGCTACTTGCTaGAGCAGGCCGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQPVATC*SRPERQ
Trigger: CTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCAGGCCTGGACCCGGTaGCGTCCAGATTTCTATCAG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCQAWTR*RPDFYQ
Trigger: CTGATAGAAATCTGGACGCCACCGGGTCCAGGCCTG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCAGGCCTGGACCCGGTaGCGTCCAGATTTCTATCAG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHQAWTR*RPDFYQ
Trigger: CTGATAGAAATCTGGACGCCACCGGGTCCAGGCCTG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCACACCACCTCGCTGGATaGAAGGAAGCCGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSHHLAG*KEAGSV
Trigger: GACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTG...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCAGCACCACCTCGCTaGATGGAAGGAAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQESAPPR*MEGSRQ
Trigger: CTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAACCAACCAGTTTCTTTaGAGAGCTCCCAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGTNQFL*RAPNRS
Trigger: ACTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGAGGCTGGGCCACTGCTaGGTGGCTGCTGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVRLGHC*VAAVRT
Trigger: TGTCCTAACAGCAGCCACCCAGCAGTGGCCCAGCCT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCCAGGCTACTGGGAGTaGGTGACCACTCTCTATCCG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCPGYWE*VTTLYP
Trigger: CGGATAGAGAGTGGTCACCCACTCCCAGTAGCCTGG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGATGTCAATGCACCCTaGGAGTGTGGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNDVNAP*ECGGIQ
Trigger: CTGAATCCCGCCACACTCTCAGGGTGCATTGACATC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTCTCCCGGTGGTCGCTaGGGCCCCCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGISPGGR*GPRRGR
Trigger: TCTCCCTCTGCGGGGGCCTCAGCGACCACCGGGAGA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCSLAMP*WVQSFP
Trigger: TGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATCCATAGGGCAACTTTaGAATGTGTGGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSIGQL*NVWSKY
Trigger: GTATTTGGACCACACATTTCAAAGTTGCCCTATGGA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGTCGCTTGCATGTTTTaGGAGTCCGGAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDVACMF*ESGRIS
Trigger: GGAGATCCTTCCGGACTCGCAAAACATGCAAGCGAC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGGCTCCGTTGTCGCTTaGATGTTTTGCGAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALGSVVA*MFCESG
Trigger: TCCGGACTCGCAAAACATGCAAGCGACAACGGAGCC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGGCTCCGTTGTCGCTTaGATGTTTTGCGAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQGSVVA*MFCESG
Trigger: TCCGGACTCGCAAAACATGCAAGCGACAACGGAGCC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTCAGCCCGTCCGAGGTaGTCTCCACGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTSARPR*SPRHCP
Trigger: TGGACAGTGGCGTGGAGAGCACCTCGGACGGGCTGA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGCGGTTGCTCTCCGGTaGTATGGGCCTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNAVALR*YGPCQP
Trigger: TGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGTCCACAGATAGATGGTaGCCTCACAGCGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVSTDRW*PHSGTC
Trigger: GCACGTGCCGCTGTGAGGGCACCATCTATCTGTGGA...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCCACAGATAGATGGTaGCCTCACAGCGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQESTDRW*PHSGTC
Trigger: GCACGTGCCGCTGTGAGGGCACCATCTATCTGTGGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGGGCAGAGAAGAGGCTaGTGGGACTCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNGQRRG*WDSAAG
Trigger: CCCTGCTGCTGAGTCCCAGCAGCCTCTTCTCTGCCC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSNQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCAGAGGGCTGCCTGGATaGCAACTGCATGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCRGLPG*QLHEGY
Trigger: GTATCCCTCATGCAGTTGGCATCCAGGCAGCCCTCT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTCTGAAAACTCCGCCTaGAGGGTGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNSENSA*RVCCCR
Trigger: TCTGCAGCAGCACACCCTGCAGGCGGAGTTTTCAGA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTCTGAAAACTCCGCCTaGAGGGTGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALSENSA*RVCCCR
Trigger: TCTGCAGCAGCACACCCTGCAGGCGGAGTTTTCAGA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTCTCCCTCTCCAGCTTaGTTTCATCCATGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCSPSPA*FHPCPA
Trigger: CGCAGGGCATGGATGAAAGCAAGCTGGAGAGGGAGA...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALFPKRT*KGEHWR
Trigger: CCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCGGAAGGACTGGGAGTaGGTGACCACTCTCTATCCG +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSRKDWE*VTTLYP
Trigger: CGGATAGAGAGTGGTCACCCACTCCCAGTCCTTCCG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000425416.6
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAATGCTCTCCGGTGCTATaGGCCTTGCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQCSPVL*ALPAKH
Trigger: GTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCA...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCTGCGTTTGATGGCTTaGCAGCTGCGCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSLRLMA*QLRAPH
Trigger: ATGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGGCAGAAGAGGGAGGTaGCCTGCGTTTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVGRRGR*PAFDGL
Trigger: CAAGCCATCAAACGCAGGCCACCTCCCTCTTCTGCC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTAGTTCCACAGATAGATaGTGCCCTCACAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQASSTDR*CPHSGT
Trigger: CGTGCCGCTGTGAGGGCACCATCTATCTGTGGAACT...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAGTTCCACAGATAGATaGTGCCCTCACAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWSSTDR*CPHSGT
Trigger: CGTGCCGCTGTGAGGGCACCATCTATCTGTGGAACT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTGTCCGCCATCCCGATaGCACGGGCAGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQECPPSR*HGQNSR
Trigger: TCTACTGTTCTGCCCGTGCCATCGGGATGGCGGACA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCCAGTAGCTACTTGCTaGAGCAGGCCGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVPVATC*SRPERQ
Trigger: CTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACCAGTAGCTACTTGCTaGAGCAGGCCGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQPVATC*SRPERQ
Trigger: CTGCCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAGGCTGGGCCACTGCTaGGTGGCTGCTGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQRLGHC*VAAVRT
Trigger: TGTCCTAACAGCAGCCACCCAGCAGTGGCCCAGCCT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGAGGCTGGGCCACTGCTaGGTGGCTGCTGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLRLGHC*VAAVRT
Trigger: TGTCCTAACAGCAGCCACCCAGCAGTGGCCCAGCCT...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGCCCCACGTAATTCATaGTCTGCACTCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDAPRNS*SALCSW
Trigger: CCATGAGCAGAGTGCAGACCATGAATTACGTGGGGC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR TCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAGAGCTCCTTCACGGTaGCAAACACCTGGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQRAPSR*QTPGRL
Trigger: TAGCCGGCCAGGTGTTTGTCACCGTGAAGGAGCTCT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGATGTCAATGCACCCTaGGAGTGTGGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEDVNAP*ECGGIQ
Trigger: CTGAATCCCGCCACACTCTCAGGGTGCATTGACATC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTACTACAGAGCTGCTTaGCGGCGTCTCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTYYRAA*RRLAGS
Trigger: GCTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAGGACTGGGAGTGGGTaGCCACTCTCTATCCGAATT +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHRTGSG*PLSIRI
Trigger: AATTCGGATAGAGAGTGGTCACCCACTCCCAGTCCT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000425416.6
CDS-3UTR TCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACATCACTTTTAGGTGTTaGAGGTCGGGAACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDITFRC*RSGTGR
Trigger: CCTTCCGGTTCCCGACCTTCAACACCTAAAAGTGAT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAQDPCL*GHPSRR
Trigger: GCGTCTACTTGGATGACCTCACAGACATGGATCCTG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIRGLVG*PGSVVA
Trigger: AGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTCGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPARGLVG*PGSVVA
Trigger: AGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCG...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSSLAMP*WVQSFP
Trigger: TGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQSLAMP*WVQSFP
Trigger: TGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCT...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSLAMP*WVQSFP
Trigger: TGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDLSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGCCCCAAACTGCACGTaGACCAGTAGCTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEAPNCT*TSSYLL
Trigger: CAGCAAGTAGCTACTGGTTCACGTGCAGTTTGGGGC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCAGATCCAGGTCACATaGGCCTTCACAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNQIQVT*AFTALP
Trigger: GGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCCAGATCCAGGTCACATaGGCCTTCACAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTQIQVT*AFTALP
Trigger: GGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTG...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCCACAAGGCCAAGTCTaGGGCCAGGCCTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIPQGQV*GQAWTR
Trigger: CCGGGTCCAGGCCTGGCCTCAGACTTGGCCTTGTGG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTGCTACTGGGAGTGGGTaGCCACTCTCTATCCGAATT +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAATGSG*PLSIRI
Trigger: AATTCGGATAGAGAGTGGTCACCCACTCCCAGTAGC...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGCCGCAACTGCAAGATaGGGGGCAGTCCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSAATAR*GAVLLQ
Trigger: TTGCAAAAGGACTGCCCCTCATCTTGCAGTTGCGGC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
CDS-3UTR TCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGCCGCAACTGCAAGATaGGGGGCAGTCCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVAATAR*GAVLLQ
Trigger: TTGCAAAAGGACTGCCCCTCATCTTGCAGTTGCGGC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGTCGCTTGCATGTTTTaGGAGTCCGGAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQVACMF*ESGRIS
Trigger: GGAGATCCTTCCGGACTCGCAAAACATGCAAGCGAC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGGCTCCGTTGTCGCTTaGATGTTTTGCGAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEGSVVA*MFCESG
Trigger: TCCGGACTCGCAAAACATGCAAGCGACAACGGAGCC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGTGTCCACGCCCGAGCTaGCCACCGACTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKCPRPS*PPTAGT
Trigger: AGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACA...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTGTCCACGCCCGAGCTaGCCACCGACTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGICPRPS*PPTAGT
Trigger: AGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTTGCCAGCCAAGCACTaGTCTGGCTTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNLPAKH*SGLLSS
Trigger: GGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCACGTGCCTTGGTACTaGGTGGTGACACTGAAAACC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWHVPWY*VVTLKT
Trigger: GGTTTTCAGTGTCACCACGCAGTACCAAGGCACGTG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCACGTGCCTTGGTACTaGGTGGTGACACTGAAAACC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQHVPWY*VVTLKT
Trigger: GGTTTTCAGTGTCACCACGCAGTACCAAGGCACGTG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTGGCAAGAGGCTaGTTGGGACATTTTACGCTG +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALLARG*LGHFTL
Trigger: CAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAGCAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCTGCTGGCAAGAGGCTaGTTGGGACATTTTACGCTG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCLLARG*LGHFTL
Trigger: CAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAGCAG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQNQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGCTCCCTTCCTATCTTaGTTAGAAATGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDAPFLS*LEMSAP
Trigger: CGGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAACAGACAGCCGCCTTCTaGCTAGGTTTCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQQTAAF*LGFTAP
Trigger: TGGGGCTGTGAAACCTAGGCAGAAGGCGGCTGTCTG...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATGCCTGGATGCCAACTaGATGAGGGATACATCCCCC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQCLDAN*MRDTSP
Trigger: GGGGGATGTATCCCTCATGCAGTTGGCATCCAGGCA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTGCCTGGATGCCAACTaGATGAGGGATACATCCCCC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQECLDAN*MRDTSP
Trigger: GGGGGATGTATCCCTCATGCAGTTGGCATCCAGGCA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGAGAGGGCTGCCTGGATaGCAACTGCATGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQERGLPG*QLHEGY
Trigger: GTATCCCTCATGCAGTTGGCATCCAGGCAGCCCTCT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCGCTGCTGCAGAGGGCTaGCTGGATGCCAACTGCATG +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTAAAEG*LDANCM
Trigger: CATGCAGTTGGCATCCAGGCAGCCCTCTGCAGCAGC...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGAGGGGCAGTCCTTTTaGAATCTACCAGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQEGQSF*NLPGYW
Trigger: CCAGTAGCCTGGTAGATTGCAAAAGGACTGCCCCTC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTGAGGGGCAGTCCTTTTaGAATCTACCAGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAEGQSF*NLPGYW
Trigger: CCAGTAGCCTGGTAGATTGCAAAAGGACTGCCCCTC...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATTCCCTCGGCCGCAACTaGAAGATGAGGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNSLGRN*KMRGSP
Trigger: AGGACTGCCCCTCATCTTGCAGTTGCGGCCGAGGGA...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTGTATGGTGCTGTCTaGCTCCTCACCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQELYGAV*LLTQHQ
Trigger: CTGATGCTGGGTGAGGAGGCAGACAGCACCATACAG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNWKGEH*RFPLGW
Trigger: CCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALWKGEH*RFPLGW
Trigger: CCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQFPKRT*KGEHWR
Trigger: CCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEFPKRT*KGEHWR
Trigger: CCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGCTTGGGCTGGCGTGCTaGGGTCCAGGCCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQLGLAC*GPGLSS
Trigger: GGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAG...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTTGACGGCGTCTCGCTaGGAGCGATCACTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTLTASR*ERSLGL
Trigger: CAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCCGAGCTCATCTCGATaGGGAACATGTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWPSSSR*GTCPHP
Trigger: AGGATGAGGACATGTTCCCCATCGAGATGAGCTCGG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCCGAGCTCATCTCGATaGGGAACATGTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQPSSSR*GTCPHP
Trigger: AGGATGAGGACATGTTCCCCATCGAGATGAGCTCGG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCCGAGCTCATCTCGATaGGGAACATGTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALPSSSR*GTCPHP
Trigger: AGGATGAGGACATGTTCCCCATCGAGATGAGCTCGG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCCGAGCTCATCTCGATaGGGAACATGTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNPSSSR*GTCPHP
Trigger: AGGATGAGGACATGTTCCCCATCGAGATGAGCTCGG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGTCTTGTTTGCTGTCTaGACTACACTGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQVLFAV*TTLAEG
Trigger: CCCCTCTGCCAGTGTAGTCCAGACAGCAAACAAGAC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGTCTTGTTTGCTGTCTaGACTACACTGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNVLFAV*TTLAEG
Trigger: CCCCTCTGCCAGTGTAGTCCAGACAGCAAACAAGAC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGTCTTGTTTGCTGTCTaGACTACACTGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCVLFAV*TTLAEG
Trigger: CCCCTCTGCCAGTGTAGTCCAGACAGCAAACAAGAC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGTTTATCTCTTTTCCTaGAAGGAGAATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGVYLFS*KENPSC
Trigger: ACAAGACGGATTCTCCTTCCAGGAAAAGAGATAAAC...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSTDCGD*LADRAP
Trigger: CGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGT...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTTTGGCAAAGGTTTCTaGAAGGCCTGCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDFGKGF*KACIAR
Trigger: CCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGCTGCGTTTGATGGCTTaGCAGCTGCGCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLLRLMA*QLRAPH
Trigger: ATGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAG...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCAGCGGCACGTGCCTTaGTACTGCGTGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNQRHVP*YCVVTL
Trigger: CAGTGTCACCACGCAGTACCAAGGCACGTGCCGCTG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGCCCCACGTAATTCATaGTCTGCACTCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCAPRNS*SALCSW
Trigger: CCATGAGCAGAGTGCAGACCATGAATTACGTGGGGC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCAATCTACCAGGCTACTaGGAGTGGGTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCNLPGY*EWVTTL
Trigger: GAGAGTGGTCACCCACTCCCAGTAGCCTGGTAGATT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACAATCTACCAGGCTACTaGGAGTGGGTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNNLPGY*EWVTTL
Trigger: GAGAGTGGTCACCCACTCCCAGTAGCCTGGTAGATT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGAATCTACCAGGCTACTaGGAGTGGGTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQNLPGY*EWVTTL
Trigger: GAGAGTGGTCACCCACTCCCAGTAGCCTGGTAGATT...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCGCTTCAGAGTTACCTaGGTCTCCTGGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQRFRVT*VSWWIL
Trigger: GAGAATCCACCAGGAGACCCAGGTAACTCTGAAGCG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAGGACTGGGAGTGGGTaGCCACTCTCTATCCGAATT +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSRTGSG*PLSIRI
Trigger: AATTCGGATAGAGAGTGGTCACCCACTCCCAGTCCT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000425416.6
CDS-3UTR TCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGATCACTTTTAGGTGTTaGAGGTCGGGAACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWITFRC*RSGTGR
Trigger: CCTTCCGGTTCCCGACCTTCAACACCTAAAAGTGAT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCATCTCCCGGTGGTCGCTaGGGCCCCCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPSPGGR*GPRRGR
Trigger: TCTCCCTCTGCGGGGGCCTCAGCGACCACCGGGAGA...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCGAGGTGGCCTGCGTTTaGTGGCTTGGCAGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSEVACV*WLGSCA
Trigger: CGCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTC...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCAAAATTGCATCCTCTaGAAACTCCGCCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALQNCIL*KLRLQG
Trigger: ACCCTGCAGGCGGAGTTTTCAGAGGATGCAATTTTG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCAAAATTGCATCCTCTaGAAACTCCGCCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHQNCIL*KLRLQG
Trigger: ACCCTGCAGGCGGAGTTTTCAGAGGATGCAATTTTG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCAGCATTCCAGCACATaGCCTCAGCATCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVQHSST*PQHHWV
Trigger: AACCCAGTGATGCTGAGGTCATGTGCTGGAATGCTG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCAGCATTCCAGCACATaGCCTCAGCATCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEQHSST*PQHHWV
Trigger: AACCCAGTGATGCTGAGGTCATGTGCTGGAATGCTG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGTTAAGCAGGTGGCCTTaGATTCTGGCAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVLSRWP*ILAAHA
Trigger: AGCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAA...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR TCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAATTAAGCAGGTGGCCTTaGATTCTGGCAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQLSRWP*ILAAHA
Trigger: AGCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAA...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGCTACTGGGAGTGGGTaGCCACTCTCTATCCGAATT +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSATGSG*PLSIRI
Trigger: AATTCGGATAGAGAGTGGTCACCCACTCCCAGTAGC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCATTATTGGAATCCATaGCCAAGCCGAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHHYWNP*PSRVWG
Trigger: TCCCCAGACTCGGCTTGGTCATGGATTCCAATAATG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCATCTTTACTACAGAGCTaGTTGACGGCGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSSLLQS*LTASRW
Trigger: CCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAAGA...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCTTTACTACAGAGCTaGTTGACGGCGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQESLLQS*LTASRW
Trigger: CCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAAGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGTCTTTACTACAGAGCTaGTTGACGGCGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVSLLQS*LTASRW
Trigger: CCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAAGA...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNISGFF*PVLSVD
Trigger: GTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAAT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGTCGCTTGCATGTTTTaGGAGTCCGGAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQVACMF*ESGRIS
Trigger: GGAGATCCTTCCGGACTCGCAAAACATGCAAGCGAC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGTCGCTTGCATGTTTTaGGAGTCCGGAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSVACMF*ESGRIS
Trigger: GGAGATCCTTCCGGACTCGCAAAACATGCAAGCGAC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGGCTCCGTTGTCGCTTaGATGTTTTGCGAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQGSVVA*MFCESG
Trigger: TCCGGACTCGCAAAACATGCAAGCGACAACGGAGCC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCATTGCCAGCCAAGCACTaGTCTGGCTTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSLPAKH*SGLLSS
Trigger: GGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAA...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCTGAGCTGCGGCGGTTaGTCTCCGGTGCTATGGGCC +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKLSCGG*SPVLWA
Trigger: GGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTGGAGGATGATTCATaGTTTACCCTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLEDDS*FTLVAK
Trigger: CTTGGCCACCAGGGTAAAGCATGAATCATCCTCCAG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTTCAAGCTTTTAAGCTaGTCGGAAGTCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDFKLLS*SEVSRR
Trigger: TCTCCGGCTGACTTCCGAGCAGCTTAAAAGCTTGAA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCACTGCTGGCAAGAGGCTaGTTGGGACATTTTACGCTG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSLLARG*LGHFTL
Trigger: CAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAGCAG...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTGCTCCCTTCCTATCTTaGTTAGAAATGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAAPFLS*LEMSAP
Trigger: CGGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGC...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCAGACAGCCGCCTTCTaGCTAGGTTTCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNQTAAF*LGFTAP
Trigger: TGGGGCTGTGAAACCTAGGCAGAAGGCGGCTGTCTG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCTTTGCCAAAAACCGTaGACATCTGGCATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDLCQKP*TSGIPR
Trigger: TCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCTGCAGGGTGTGCTGCTaGAGAGGGCTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSACRVCC*RGLPGC
Trigger: GCATCCAGGCAGCCCTCTGCAGCAGCACACCCTGCA...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAGGCAGGTGTTAATATaGCAGCCTTGCCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSRQVLI*QPCQGS
Trigger: TGAGCCCTGGCAAGGCTGGCATATTAACACCTGCCT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAGGCAGGTGTTAATATaGCAGCCTTGCCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQRQVLI*QPCQGS
Trigger: TGAGCCCTGGCAAGGCTGGCATATTAACACCTGCCT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTAGCAGGCTGGGCCACTaGTGGGTGGCTGCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILSRLGH*WVAAVR
Trigger: CCTAACAGCAGCCACCCAGCAGTGGCCCAGCCTGCT...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGGGCAGTCCTTTTaGAATCTACCAGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQEGQSF*NLPGYW
Trigger: CCAGTAGCCTGGTAGATTGCAAAAGGACTGCCCCTC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396097.5
ENST00000396099.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAGGTTTCCATTGGGCTaGCGGATGACAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDRFPLG*RMTMMS
Trigger: TGACATCATTGTCATCCGCCAGCCCAATGGAAACCT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGAGCCCCTTTTCAGCTaGCATTCCATTCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWEPLFS*HSILEA
Trigger: AGCTTCGAGAATGGAATGCCAGCTGAAAAGGGGCTC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGAGCCCCTTTTCAGCTaGCATTCCATTCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNEPLFS*HSILEA
Trigger: AGCTTCGAGAATGGAATGCCAGCTGAAAAGGGGCTC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAQPKHF*VLLPCP
Trigger: AGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNQPKHF*VLLPCP
Trigger: AGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCCCACCGACCAGAGTTaGCGATTGGTCACTAAAAGT +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALPTDQS*RLVTKS
Trigger: ACTTTTAGTGACCAATCGCCAACTCTGGTCGGTGGG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCCCACCGACCAGAGTTaGCGATTGGTCACTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQPTDQS*RLVTKS
Trigger: ACTTTTAGTGACCAATCGCCAACTCTGGTCGGTGGG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCCCACCGACCAGAGTTaGCGATTGGTCACTAAAAGT +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAPTDQS*RLVTKS
Trigger: ACTTTTAGTGACCAATCGCCAACTCTGGTCGGTGGG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILTAGTG*LTGLRC
Trigger: ACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGT...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTTCGTGATCTCCCGGTaGTCGCTGAGGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIFVISR*SLRPPQ
Trigger: CTGCGGGGGCCTCAGCGACCACCGGGAGATCACGAA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTTTCGTGATCTCCCGGTaGTCGCTGAGGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAFVISR*SLRPPQ
Trigger: CTGCGGGGGCCTCAGCGACCACCGGGAGATCACGAA...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTTTGGCAAAGGTTTCTaGAAGGCCTGCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWFGKGF*KACIAR
Trigger: CCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHFHSGL*QRFLEG
Trigger: GCCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNFHSGL*QRFLEG
Trigger: GCCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWFHSGL*QRFLEG
Trigger: GCCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAGCCAAGCACTGCTCTaGCTTACTTTCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDSQALL*LTFLLD
Trigger: ATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCCTGCGTTTGATGGCTTaGCAGCTGCGCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTLRLMA*QLRAPH
Trigger: ATGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAG...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAGTTCCACAGATAGATaGTGCCCTCACAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQSSTDR*CPHSGT
Trigger: CGTGCCGCTGTGAGGGCACCATCTATCTGTGGAACT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAATCCTTCCCAAGGGTaGGCAAAATGTGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHNPSQG*AKCGQE
Trigger: CTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCAATCCTTCCCAAGGGTaGGCAAAATGTGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCNPSQG*AKCGQE
Trigger: CTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGAATCCTTCCCAAGGGTaGGCAAAATGTGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALNPSQG*AKCGQE
Trigger: CTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATT...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTTCTGGCTCACTTTATaGTACAGCTTAGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDFWLTL*YSLAMP
Trigger: GGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAAAACCGTGCACATCTaGCATTCCTCGATTGACCCT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDKTVHI*HSSIDP
Trigger: AGGGTCAATCGAGGAATGCCAGATGTGCACGGTTTT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCCAGGCCTGGACCCGGTaGCGTCCAGATTTCTATCAG +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTQAWTR*RPDFYQ
Trigger: CTGATAGAAATCTGGACGCCACCGGGTCCAGGCCTG...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCAGCCAAAGTTCCTCCTaGGTGCAAAGGAGAAACCGT +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCSQSSS*VQRRNR
Trigger: ACGGTTTCTCCTTTGCACCCAGGAGGAACTTTGGCT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCTGTTAGGACAGGCATaGCTGGCCCCGGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILLLGQA*LAPVLP
Trigger: GGGCAAGACCGGGGCCAGCCATGCCTGTCCTAACAG...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAGCCCCACGTAATTCATaGTCTGCACTCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQAPRNS*SALCSW
Trigger: CCATGAGCAGAGTGCAGACCATGAATTACGTGGGGC...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGGACTTTCCGAAGGATaGAACAGGGAAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNGLSEG*NREDCG
Trigger: TCCACAGTCTTCCCTGTTCCATCCTTCGGAAAGTCC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396097.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCGCTTCAGAGTTACCTaGGTCTCCTGGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQERFRVT*VSWWIL
Trigger: GAGAATCCACCAGGAGACCCAGGTAACTCTGAAGCG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGATGTCAATGCACCCTaGGAGTGTGGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNDVNAP*ECGGIQ
Trigger: CTGAATCCCGCCACACTCTCAGGGTGCATTGACATC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGATCACTTTTAGGTGTTaGAGGTCGGGAACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEITFRC*RSGTGR
Trigger: CCTTCCGGTTCCCGACCTTCAACACCTAAAAGTGAT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAACAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQQDPCL*GHPSRR
Trigger: GCGTCTACTTGGATGACCTCACAGACATGGATCCTG...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCTCTCCCGGTGGTCGCTaGGGCCCCCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSSPGGR*GPRRGR
Trigger: TCTCCCTCTGCGGGGGCCTCAGCGACCACCGGGAGA...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNSLAMP*WVQSFP
Trigger: TGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQELSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCAAAATTGCATCCTCTaGAAACTCCGCCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVQNCIL*KLRLQG
Trigger: ACCCTGCAGGCGGAGTTTTCAGAGGATGCAATTTTG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCAACTCGTATATGCGTaGGTGCAGCCCATATACAAA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDQLVYA*VQPIYK
Trigger: TTTGTATATGGGCTGCACTCACGCATATACGAGTTG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTCACTTGGGCTGGCGTaGTGGGGTCCAGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGISLGLA*WGPGLS
Trigger: TGAGAGGCCTGGACCCCAGCACGCCAGCCCAAGTGA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAATCTTTACTACAGAGCTaGTTGACGGCGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQSLLQS*LTASRW
Trigger: CCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAAGA...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSISGFF*PVLSVD
Trigger: GTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAAT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTAGAATCCGTCTTGTTTaGTGTCTGGACTACACTGGC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQARIRLV*CLDYTG
Trigger: GCCAGTGTAGTCCAGACAGCAAACAAGACGGATTCT...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGAGGAGGGGTGCTaGTGTTGTCCAGTTATAATA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNQEEGC*CCPVII
Trigger: TATTATAACTGGACAACAGCAGCACCCCTCCTCCTG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGCGGTTGCTCTCCGGTaGTATGGGCCTTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIAVALR*YGPCQP
Trigger: TGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCTGAGCTGCGGCGGTTaGTCTCCGGTGCTATGGGCC +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLLSCGG*SPVLWA
Trigger: GGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACTGGAGGATGATTCATaGTTTACCCTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQLEDDS*FTLVAK
Trigger: CTTGGCCACCAGGGTAAAGCATGAATCATCCTCCAG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTTCAAGCTTTTAAGCTaGTCGGAAGTCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAFKLLS*SEVSRR
Trigger: TCTCCGGCTGACTTCCGAGCAGCTTAAAAGCTTGAA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTGGGCAGAGAAGAGGCTaGTGGGACTCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAGQRRG*WDSAAG
Trigger: CCCTGCTGCTGAGTCCCAGCAGCCTCTTCTCTGCCC...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCAATCACTTCTCTGTaGAGGGCAGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQESITSL*RAEKRL
Trigger: CAGCCTCTTCTCTGCCCTGCACAGAGAAGTGATTGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATCAATCACTTCTCTGTaGAGGGCAGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSITSL*RAEKRL
Trigger: CAGCCTCTTCTCTGCCCTGCACAGAGAAGTGATTGA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAATCAATCACTTCTCTGTaGAGGGCAGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQSITSL*RAEKRL
Trigger: CAGCCTCTTCTCTGCCCTGCACAGAGAAGTGATTGA...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAAAGACACTCCTACTTaGTTGTATGAATACACATCA +
Preference number: 4 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGKDTPT*LYEYTS
Trigger: TGATGTGTATTCATACAAGCAAGTAGGAGTGTCTTT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGGGGCAGGGGAGAAATaGTTCTCAATTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQGAGEK*FSILSA
Trigger: AGCAGAGAGAATTGAGAAGCATTTCTCCCCTGCCCC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGCTCCCTTCCTATCTTaGTTAGAAATGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSAPFLS*LEMSAP
Trigger: CGGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCGAACCAGTAGCTACTTaGTGGAGCAGGCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTEPVAT*WSRPER
Trigger: CCTTTCCGGCCTGCTCCAGCAAGTAGCTACTGGTTC...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCTTTGCCAAAAACCGTaGACATCTGGCATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHLCQKP*TSGIPR
Trigger: TCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCTTTGCCAAAAACCGTaGACATCTGGCATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQLCQKP*TSGIPR
Trigger: TCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGATGTGCCCCCTACTTTaGCAAAAACCGTGCACATCT +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALMCPLL*QKPCTS
Trigger: AGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAACCGTCTGAACCTTTaGAGGCCCATGAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWNRLNL*RPMSLY
Trigger: GTATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATAGAGGGCTGCCTGGATaGCAACTGCATGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNRGLPG*QLHEGY
Trigger: GTATCCCTCATGCAGTTGGCATCCAGGCAGCCCTCT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACACTTTCTGGAAAGCATaGTCTGTTTCAGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDTFWKA*SVSGCS
Trigger: ACTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATTTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNFPKRT*KGEHWR
Trigger: CCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAA...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCCCCTTTTCAGCTaGCATTCCATTCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQEPLFS*HSILEA
Trigger: AGCTTCGAGAATGGAATGCCAGCTGAAAAGGGGCTC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAGAGCCCCTTTTCAGCTaGCATTCCATTCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQEPLFS*HSILEA
Trigger: AGCTTCGAGAATGGAATGCCAGCTGAAAAGGGGCTC...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCGGGAACCGGAAGGACTaGGAGTGGGTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAGNRKD*EWVTTL
Trigger: GAGAGTGGTCACCCACTCCCAGTCCTTCCGGTTCCC...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000425416.6
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSQPKHF*VLLPCP
Trigger: AGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQQPKHF*VLLPCP
Trigger: AGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCCCACCGACCAGAGTTaGCGATTGGTCACTAAAAGT +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSPTDQS*RLVTKS
Trigger: ACTTTTAGTGACCAATCGCCAACTCTGGTCGGTGGG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAAGGATCTCCGTTTTTaGGAAAATACAGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWKDLRF*ENTGPP
Trigger: TGGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGITAGTG*LTGLRC
Trigger: ACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGT...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKTAGTG*LTGLRC
Trigger: ACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCTTTGGCAAAGGTTTCTaGAAGGCCTGCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSFGKGF*KACIAR
Trigger: CCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAA...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATTTGGCAAAGGTTTCTaGAAGGCCTGCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQFGKGF*KACIAR
Trigger: CCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEFHSGL*QRFLEG
Trigger: GCCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAGCCAAGCACTGCTCTaGCTTACTTTCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHSQALL*LTFLLD
Trigger: ATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCGCGCTCCTCATCACTaGAGGATGATTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWRAPHH*RMIHAL
Trigger: TAAAGCATGAATCATCCTCCAGTGATGAGGAGCGCG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCGCGCTCCTCATCACTaGAGGATGATTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQARAPHH*RMIHAL
Trigger: TAAAGCATGAATCATCCTCCAGTGATGAGGAGCGCG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCAGCGGCACGTGCCTTaGTACTGCGTGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILQRHVP*YCVVTL
Trigger: CAGTGTCACCACGCAGTACCAAGGCACGTGCCGCTG...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGAGGGTGGGCAAAATGTaGCCAAGAGTATCTGATCTG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQRVGKM*PRVSDL
Trigger: CAGATCAGATACTCTTGGCCACATTTTGCCCACCCT...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATCCTTCCCAAGGGTaGGCAAAATGTGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQNPSQG*AKCGQE
Trigger: CTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATT...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWSNGKT*STTSQS
Trigger: ACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACGCCAGGCTCCCAGGTaGAGCTGTGCACTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPRQAPR*SCALRG
Trigger: TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACAAAACCGTGCACATCTaGCATTCCTCGATTGACCCT +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNKTVHI*HSSIDP
Trigger: AGGGTCAATCGAGGAATGCCAGATGTGCACGGTTTT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAGCCAAAGTTCCTCCTaGGTGCAAAGGAGAAACCGT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSQSSS*VQRRNR
Trigger: ACGGTTTCTCCTTTGCACCCAGGAGGAACTTTGGCT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAGCCAAAGTTCCTCCTaGGTGCAAAGGAGAAACCGT +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSSQSSS*VQRRNR
Trigger: ACGGTTTCTCCTTTGCACCCAGGAGGAACTTTGGCT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTCTGCACTCTGCTCATaGATGAGGTTTCTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDSALCS*MRFLVV
Trigger: GACAACTAGAAACCTCATCCATGAGCAGAGTGCAGA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGAATCTACCAGGCTACTaGGAGTGGGTGACCACTCTC +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLNLPGY*EWVTTL
Trigger: GAGAGTGGTCACCCACTCCCAGTAGCCTGGTAGATT...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGTCACTAAAAGTGTCTaGAGATTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWVTKSV*RFAVNG
Trigger: GCCATTCACAGCGAATCTTCAGACACTTTTAGTGAC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACAACTGCATTTCTGTCTaGGGCTTGTTCTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNNCISV*GLFWSK
Trigger: TTTGGACCAGAACAAGCCTCAGACAGAAATGCAGTT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAACTGCATTTCTGTCTaGGGCTTGTTCTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHNCISV*GLFWSK
Trigger: TTTGGACCAGAACAAGCCTCAGACAGAAATGCAGTT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCACAAACTGTTGATATaGCACAGCTTGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWHKLLI*HSLLQE
Trigger: TTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCACAAACTGTTGATATaGCACAGCTTGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCHKLLI*HSLLQE
Trigger: TTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTTGTCCACAAACTGTTaGTATGACACAGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALSTNC*YDTACS
Trigger: GGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTTGTCCACAAACTGTTaGTATGACACAGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWLSTNC*YDTACS
Trigger: GGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTCCTACTTGCTTGTATaGATACACATCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHSYLLV*IHISWS
Trigger: CGACCAGCTGATGTGTATTCATACAAGCAAGTAGGA...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTCCTACTTGCTTGTATaGATACACATCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNSYLLV*IHISWS
Trigger: CGACCAGCTGATGTGTATTCATACAAGCAAGTAGGA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCGAACAGGGAAAGTCTaGAGAATGGCTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNRTGKV*RMASFQ
Trigger: CTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCGAACAGGGAAAGTCTaGAGAATGGCTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQRTGKV*RMASFQ
Trigger: CTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCTGGCATTCCTCGATTaGCCCTGTCCTAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKLAFLD*PCPRRG
Trigger: TCCCCGCCTAGGACAGGGTCAATCGAGGAATGCCAG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCAACTCGTATATGCGTaGGTGCAGCCCATATACAAA +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQQLVYA*VQPIYK
Trigger: TTTGTATATGGGCTGCACTCACGCATATACGAGTTG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCAACTCGTATATGCGTaGGTGCAGCCCATATACAAA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHQLVYA*VQPIYK
Trigger: TTTGTATATGGGCTGCACTCACGCATATACGAGTTG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTCACTTGGGCTGGCGTaGTGGGGTCCAGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLSLGLA*WGPGLS
Trigger: TGAGAGGCCTGGACCCCAGCACGCCAGCCCAAGTGA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAGAATCCGTCTTGTTTaGTGTCTGGACTACACTGGC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQRIRLV*CLDYTG
Trigger: GCCAGTGTAGTCCAGACAGCAAACAAGACGGATTCT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGAGCTGCCCACCGACTaGGGGGACTGGTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFELPTD*GDWLAD
Trigger: GTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTC...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTCAGCCCGTCCGAGGTaGTCTCCACGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLSARPR*SPRHCP
Trigger: TGGACAGTGGCGTGGAGAGCACCTCGGACGGGCTGA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCAGGAGGAGGGGTGCTaGTGTTGTCCAGTTATAATA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSQEEGC*CCPVII
Trigger: TATTATAACTGGACAACAGCAGCACCCCTCCTCCTG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCAGGAGGAGGGGTGCTaGTGTTGTCCAGTTATAATA +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEQEEGC*CCPVII
Trigger: TATTATAACTGGACAACAGCAGCACCCCTCCTCCTG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACAGGAGGAGGGGTGCTaGTGTTGTCCAGTTATAATA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQQEEGC*CCPVII
Trigger: TATTATAACTGGACAACAGCAGCACCCCTCCTCCTG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTTGCCAGCCAAGCACTaGTCTGGCTTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTLPAKH*SGLLSS
Trigger: GGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTCGGTGCTATGGGCCTTaGCAGCCAAGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPARCYGP*QPSTAL
Trigger: CAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCG...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCAGAGATGTTGGTCTTTaGATGTTCCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCRDVGL*MFLYQL
Trigger: GAGCTGGTACAGGAACATGCAAAGACCAACATCTCT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACAGAGATGTTGGTCTTTaGATGTTCCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNRDVGL*MFLYQL
Trigger: GAGCTGGTACAGGAACATGCAAAGACCAACATCTCT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAGAGATGTTGGTCTTTaGATGTTCCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWRDVGL*MFLYQL
Trigger: GAGCTGGTACAGGAACATGCAAAGACCAACATCTCT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTCCCAGGTGGAGCTGTaGACTCCGGGGAGACCTATC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGISQVEL*TPGRPI
Trigger: GATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTTCTCAATTCTCTCTaGTGTCAGGCCAATGATGAC +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLLNSL*CQANDD
Trigger: GTCATCATTGGCCTGACAGCAGAGAGAATTGAGAAG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGCTCCCTTCCTATCTTaGTTAGAAATGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQAPFLS*LEMSAP
Trigger: CGGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGCCACAACTGAGGAATaGTTTTCACGGTACAAATGC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNATTEE*FSRYKC
Trigger: GCATTTGTACCGTGAAAAGCATTCCTCAGTTGTGGC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGCCACAACTGAGGAATaGTTTTCACGGTACAAATGC +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALATTEE*FSRYKC
Trigger: GCATTTGTACCGTGAAAAGCATTCCTCAGTTGTGGC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGCCACAACTGAGGAATaGTTTTCACGGTACAAATGC +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCATTEE*FSRYKC
Trigger: GCATTTGTACCGTGAAAAGCATTCCTCAGTTGTGGC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGATGTGCCCCCTACTTTaGCAAAAACCGTGCACATCT +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEMCPLL*QKPCTS
Trigger: AGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAAGGGAATCTGCACATaGACATCCGTGTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHKGICT*TSVFLQ
Trigger: CTGTAGAAACACGGATGTGCATGTGCAGATTCCCTT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGAACCGTCTGAACCTTTaGAGGCCCATGAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVNRLNL*RPMSLY
Trigger: GTATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAACCGTCTGAACCTTTaGAGGCCCATGAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSNRLNL*RPMSLY
Trigger: GTATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGAAAGGCCCCTGCTCATaGGAACCTGGGTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQKGPCS*EPGSPG
Trigger: ACCAGGAGACCCAGGTTCGCATGAGCAGGGGCCTTT...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATTGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNWKGEH*RFPLGW
Trigger: CCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCA...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTAGCGATCACTTGGGCTaGCGTGCTGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFSDHLG*RAGVQA
Trigger: GGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCT...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTTTGACGGCGTCTCGCTaGGAGCGATCACTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPALTASR*ERSLGL
Trigger: CAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAA...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGCAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLQPKHF*VLLPCP
Trigger: AGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTG...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTACTGCTCAATGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWYCSMG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGTACTGCTCAATGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQYCSMG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTA...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACACCAGAGTTGGCGATTaGTCACTAAAAGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDTRVGD*SLKVSE
Trigger: TTCAGACACTTTTAGTGACCAATCGCCAACTCTGGT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCGCGCTCCTCATCACTaGAGGATGATTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQERAPHH*RMIHAL
Trigger: TAAAGCATGAATCATCCTCCAGTGATGAGGAGCGCG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTGGCAGAAGAGGGAGGTaGCCTGCGTTTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILGRRGR*PAFDGL
Trigger: CAAGCCATCAAACGCAGGCCACCTCCCTCTTCTGCC...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGAGGGTGGGCAAAATGTaGCCAAGAGTATCTGATCTG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQERVGKM*PRVSDL
Trigger: CAGATCAGATACTCTTGGCCACATTTTGCCCACCCT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAAGGGTGGGCAAAATGTaGCCAAGAGTATCTGATCTG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSRVGKM*PRVSDL
Trigger: CAGATCAGATACTCTTGGCCACATTTTGCCCACCCT...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCTTCTGGCTCACTTTATaGTACAGCTTAGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSFWLTL*YSLAMP
Trigger: GGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAA...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVSNGKT*STTSQS
Trigger: ACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCGCCAGGCTCCCAGGTaGAGCTGTGCACTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSRQAPR*SCALRG
Trigger: TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGAAAACCGTGCACATCTaGCATTCCTCGATTGACCCT +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVKTVHI*HSSIDP
Trigger: AGGGTCAATCGAGGAATGCCAGATGTGCACGGTTTT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGACCAACCAGTTTCTTTaGAGAGCTCCCAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWTNQFL*RAPNRS
Trigger: ACTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCGAACCTGGGTCTCCTaGTGGATTCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQERTWVS*WILLFL
Trigger: AAGAAAAAGGAGAATCCACCAGGAGACCCAGGTTCG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTCTGCACTCTGCTCATaGATGAGGTTTCTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNSALCS*MRFLVV
Trigger: GACAACTAGAAACCTCATCCATGAGCAGAGTGCAGA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCAGGCTACTGGGAGTaGGTGACCACTCTCTATCCG +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILPGYWE*VTTLYP
Trigger: CGGATAGAGAGTGGTCACCCACTCCCAGTAGCCTGG...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCAGAGCTCCTTCACGGTaGCAAACACCTGGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSRAPSR*QTPGRL
Trigger: TAGCCGGCCAGGTGTTTGTCACCGTGAAGGAGCTCT...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCGATGTCAATGCACCCTaGGAGTGTGGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSADVNAP*ECGGIQ
Trigger: CTGAATCCCGCCACACTCTCAGGGTGCATTGACATC...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTACTACAGAGCTGCTTaGCGGCGTCTCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLYYRAA*RRLAGS
Trigger: GCTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTTTCCGTGGACTTGCTaGCCAATTCTGAATCACTTT +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHFPWTC*PILNHF
Trigger: AAAGTGATTCAGAATTGGTCAGCAAGTCCACGGAAA...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGTCACTAAAAGTGTCTaGAGATTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQVTKSV*RFAVNG
Trigger: GCCATTCACAGCGAATCTTCAGACACTTTTAGTGAC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGTCACTAAAAGTGTCTaGAGATTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEVTKSV*RFAVNG
Trigger: GCCATTCACAGCGAATCTTCAGACACTTTTAGTGAC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATTCTCCCGGTGGTCGCTaGGGCCCCCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYSPGGR*GPRRGR
Trigger: TCTCCCTCTGCGGGGGCCTCAGCGACCACCGGGAGA...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAACACAAACTGTTGATATaGCACAGCTTGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQHKLLI*HSLLQE
Trigger: TTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTG...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCTCCTACTTGCTTGTATaGATACACATCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSSYLLV*IHISWS
Trigger: CGACCAGCTGATGTGTATTCATACAAGCAAGTAGGA...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATCCTACTTGCTTGTATaGATACACATCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSYLLV*IHISWS
Trigger: CGACCAGCTGATGTGTATTCATACAAGCAAGTAGGA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCCTACTTGCTTGTATaGATACACATCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQESYLLV*IHISWS
Trigger: CGACCAGCTGATGTGTATTCATACAAGCAAGTAGGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCGAACAGGGAAAGTCTaGAGAATGGCTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVRTGKV*RMASFQ
Trigger: CTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGTACGCTGAGGCAGAATaGATGTCCTGGTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQYAEAE*MSWFSK
Trigger: TTTTGAAAACCAGGACATTCATTCTGCCTCAGCGTA...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTACGCTGAGGCAGAATaGATGTCCTGGTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALYAEAE*MSWFSK
Trigger: TTTTGAAAACCAGGACATTCATTCTGCCTCAGCGTA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTACGCTGAGGCAGAATaGATGTCCTGGTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAYAEAE*MSWFSK
Trigger: TTTTGAAAACCAGGACATTCATTCTGCCTCAGCGTA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNLSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGCATTAAGCCACAACTaGGGAATGCTTTTCACGGTA +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVALSHN*GMLFTV
Trigger: TACCGTGAAAAGCATTCCTCAGTTGTGGCTTAATGC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGCATTAAGCCACAACTaGGGAATGCTTTTCACGGTA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQALSHN*GMLFTV
Trigger: TACCGTGAAAAGCATTCCTCAGTTGTGGCTTAATGC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGCATTAAGCCACAACTaGGGAATGCTTTTCACGGTA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSALSHN*GMLFTV
Trigger: TACCGTGAAAAGCATTCCTCAGTTGTGGCTTAATGC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCGCCCCAAACTGCACGTaGACCAGTAGCTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAAPNCT*TSSYLL
Trigger: CAGCAAGTAGCTACTGGTTCACGTGCAGTTTGGGGC...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTAAGAAGGTCAGTCTATaGGAAAGAGAGAATAAGGCC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAKKVSL*ERENKA
Trigger: GGCCTTATTCTCTCTTTCTCATAGACTGACCTTCTT...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCGCTTGCCCTTAATTTaGGTGGAAAAAGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHRLPLI*VEKAKE
Trigger: TTCCTTAGCTTTTTCCACTCAAATTAAGGGCAAGCG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCAAAATTGCATCCTCTaGAAACTCCGCCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNQNCIL*KLRLQG
Trigger: ACCCTGCAGGCGGAGTTTTCAGAGGATGCAATTTTG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGAACTTGACACAGATCTaGGAGTGTGACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALNLTQI*ECDFLE
Trigger: TTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTT...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTCCATAGGGCAACTTTaGAATGTGTGGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCSIGQL*NVWSKY
Trigger: GTATTTGGACCACACATTTCAAAGTTGCCCTATGGA...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTCCATAGGGCAACTTTaGAATGTGTGGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALSIGQL*NVWSKY
Trigger: GTATTTGGACCACACATTTCAAAGTTGCCCTATGGA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGTGTGCTTACAGTGGTaGTCCAAACATAAAATTGCA +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDVCLQW*SKHKIA
Trigger: TGCAATTTTATGTTTGGATCACCACTGTAAGCACAC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTISGFF*PVLSVD
Trigger: GTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAAT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCACAAATTTTTCTACTaGTCAATGGGCTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDHKFFY*SMGWTL
Trigger: AAGAGTCCAGCCCATTGAGCAGTAGAAAAATTTGTG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCGAGCTGCCCACCGACTaGGGGGACTGGTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSELPTD*GDWLAD
Trigger: GTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTC...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTTCAGCCCGTCCGAGGTaGTCTCCACGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFSARPR*SPRHCP
Trigger: TGGACAGTGGCGTGGAGAGCACCTCGGACGGGCTGA...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCTGGAGGATGATTCATaGTTTACCCTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNLEDDS*FTLVAK
Trigger: CTTGGCCACCAGGGTAAAGCATGAATCATCCTCCAG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTCCACAGATAGATGGTaGCCTCACAGCGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGISTDRW*PHSGTC
Trigger: GCACGTGCCGCTGTGAGGGCACCATCTATCTGTGGA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAGAGATGTTGGTCTTTaGATGTTCCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQRDVGL*MFLYQL
Trigger: GAGCTGGTACAGGAACATGCAAAGACCAACATCTCT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTAACCAGGCTCTGCACTaGTGGCAAGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPANQALH*WQEAAW
Trigger: CCAAGCAGCCTCTTGCCAGCAGTGCAGAGCCTGGTT...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCTTCTCAATTCTCTCTaGTGTCAGGCCAATGATGAC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSLLNSL*CQANDD
Trigger: GTCATCATTGGCCTGACAGCAGAGAGAATTGAGAAG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTTCTCAATTCTCTCTaGTGTCAGGCCAATGATGAC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQELLNSL*CQANDD
Trigger: GTCATCATTGGCCTGACAGCAGAGAGAATTGAGAAG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCTTCTCAATTCTCTCTaGTGTCAGGCCAATGATGAC +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVLLNSL*CQANDD
Trigger: GTCATCATTGGCCTGACAGCAGAGAGAATTGAGAAG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGAAGGGAATCTGCACATaGACATCCGTGTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVKGICT*TSVFLQ
Trigger: CTGTAGAAACACGGATGTGCATGTGCAGATTCCCTT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAAAGGGAATCTGCACATaGACATCCGTGTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSKGICT*TSVFLQ
Trigger: CTGTAGAAACACGGATGTGCATGTGCAGATTCCCTT...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCTGCAAAAGGGAATCTaGACATGCACATCCGTGTTT +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVLQKGI*TCTSVF
Trigger: AAACACGGATGTGCATGTGCAGATTCCCTTTTGCAG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAACTTTCTGGAAAGCATaGTCTGTTTCAGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSTFWKA*SVSGCS
Trigger: ACTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGT...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTCGTATATGCGTGAGTaGAGCCCATATACAAATCTC +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHSYMRE*SPYTNL
Trigger: GAGATTTGTATATGGGCTGCACTCACGCATATACGA...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGTCGTATATGCGTGAGTaGAGCCCATATACAAATCTC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQSYMRE*SPYTNL
Trigger: GAGATTTGTATATGGGCTGCACTCACGCATATACGA...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAATCATGGTCTGCACTCTaGTCATGGATGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQSWSAL*SWMRFL
Trigger: TAGAAACCTCATCCATGAGCAGAGTGCAGACCATGA...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACTTGGGCTGGCGTGCTaGGGTCCAGGCCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSLGLAC*GPGLSS
Trigger: GGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCGGAAGGACTGGGAGTaGGTGACCACTCTCTATCCG +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKRKDWE*VTTLYP
Trigger: CGGATAGAGAGTGGTCACCCACTCCCAGTCCTTCCG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000425416.6
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCTCTTTCATCTTGTGTaGAGAAGAAGACTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQLFHLV*RRRLSS
Trigger: GCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTCTTTCATCTTGTGTaGAGAAGAAGACTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALFHLV*RRRLSS
Trigger: GCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTTTTCTACTGCTCAATaGGCTGGACTCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDFSTAQ*AGLFHL
Trigger: AAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACACCAGAGTTGGCGATTaGTCACTAAAAGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHTRVGD*SLKVSE
Trigger: TTCAGACACTTTTAGTGACCAATCGCCAACTCTGGT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTTTGGCAAAGGTTTCTaGAAGGCCTGCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTFGKGF*KACIAR
Trigger: CCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGCGCGCTCCTCATCACTaGAGGATGATTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLRAPHH*RMIHAL
Trigger: TAAAGCATGAATCATCCTCCAGTGATGAGGAGCGCG...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATAATCCTTCCCAAGGGTaGGCAAAATGTGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNNPSQG*AKCGQE
Trigger: CTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTGTCCGCCATCCCGATaGCACGGGCAGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGICPPSR*HGQNSR
Trigger: TCTACTGTTCTGCCCGTGCCATCGGGATGGCGGACA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTGTCCGCCATCCCGATaGCACGGGCAGAACAGTAGA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGICPPSR*HGQNSR
Trigger: TCTACTGTTCTGCCCGTGCCATCGGGATGGCGGACA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQSNGKT*STTSQS
Trigger: ACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVLVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQELVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQLVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGACCAACCAGTTTCTTTaGAGAGCTCCCAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQETNQFL*RAPNRS
Trigger: ACTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAGGGTGCAGTGATGTaGAAGTTTAAGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWQGAVM*KFKVHQ
Trigger: TTGATGTACCTTAAACTTCCACATCACTGCACCCTG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGAGAGTGTGACTTTCTaGAAAGCATGCTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQESVTF*KACSVS
Trigger: TGAAACAGAGCATGCTTTCCAGAAAGTCACACTCTC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAATCTGCACTCTGCTCATaGATGAGGTTTCTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: MVQLSDALMGPILPKGGQSALCS*MRFLVV
Trigger: GACAACTAGAAACCTCATCCATGAGCAGAGTGCAGA...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGGATGTCAATGCACCCTaGGAGTGTGGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKDVNAP*ECGGIQ
Trigger: CTGAATCCCGCCACACTCTCAGGGTGCATTGACATC...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTTTCCGTGGACTTGCTaGCCAATTCTGAATCACTTT +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEFPWTC*PILNHF
Trigger: AAAGTGATTCAGAATTGGTCAGCAAGTCCACGGAAA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGTCACTAAAAGTGTCTaGAGATTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQVTKSV*RFAVNG
Trigger: GCCATTCACAGCGAATCTTCAGACACTTTTAGTGAC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGAACTGCATTTCTGTCTaGGGCTTGTTCTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLNCISV*GLFWSK
Trigger: TTTGGACCAGAACAAGCCTCAGACAGAAATGCAGTT...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAACACAAACTGTTGATATaGCACAGCTTGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQHKLLI*HSLLQE
Trigger: TTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTG...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGAAAAACAGGTTTTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGKTGF*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAAAACCTGTTTTTCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGGAAAAACAGGTTTTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCGKTGF*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAAAACCTGTTTTTCC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTACGCTGAGGCAGAATaGATGTCCTGGTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQEYAEAE*MSWFSK
Trigger: TTTTGAAAACCAGGACATTCATTCTGCCTCAGCGTA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGGGAGATATGCCAATaGAATAGACTATCTTTAACC +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGEICQ*NRLSLT
Trigger: GGTTAAAGATAGTCTATTTCATTGGCATATCTCCCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGGGGAGATATGCCAATaGAATAGACTATCTTTAACC +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALGEICQ*NRLSLT
Trigger: GGTTAAAGATAGTCTATTTCATTGGCATATCTCCCC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGGGGAGATATGCCAATaGAATAGACTATCTTTAACC +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHGEICQ*NRLSLT
Trigger: GGTTAAAGATAGTCTATTTCATTGGCATATCTCCCC...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAACTTGACACAGATCTaGGAGTGTGACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSNLTQI*ECDFLE
Trigger: TTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAACTTGACACAGATCTaGGAGTGTGACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQNLTQI*ECDFLE
Trigger: TTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCCAGCATTCCAGCACATaGCCTCAGCATCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAQHSST*PQHHWV
Trigger: AACCCAGTGATGCTGAGGTCATGTGCTGGAATGCTG...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCCATAGGGCAACTTTaGAATGTGTGGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQESIGQL*NVWSKY
Trigger: GTATTTGGACCACACATTTCAAAGTTGCCCTATGGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGTGTGCTTACAGTGGTaGTCCAAACATAAAATTGCA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNVCLQW*SKHKIA
Trigger: TGCAATTTTATGTTTGGATCACCACTGTAAGCACAC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCGCCGCAACTGCAAGATaGGGGGCAGTCCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSAATAR*GAVLLQ
Trigger: TTGCAAAAGGACTGCCCCTCATCTTGCAGTTGCGGC...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCACAAATTTTTCTACTaGTCAATGGGCTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQHKFFY*SMGWTL
Trigger: AAGAGTCCAGCCCATTGAGCAGTAGAAAAATTTGTG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCACAAATTTTTCTACTaGTCAATGGGCTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCHKFFY*SMGWTL
Trigger: AAGAGTCCAGCCCATTGAGCAGTAGAAAAATTTGTG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAGAGATGTTGGTCTTTaGATGTTCCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQRDVGL*MFLYQL
Trigger: GAGCTGGTACAGGAACATGCAAAGACCAACATCTCT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGAGAGATGTTGGTCTTTaGATGTTCCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLRDVGL*MFLYQL
Trigger: GAGCTGGTACAGGAACATGCAAAGACCAACATCTCT...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGCTATAATGGAAATGTaGCCCCTACTTTGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWAIMEM*PLLCQK
Trigger: TTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGCTATAATGGAAATGTaGCCCCTACTTTGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: VHSGETYPLMGDNQALHCAIMEM*PLLCQK
Trigger: TTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAGAGGGCTGCCTGGATaGCAACTGCATGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIRGLPG*QLHEGY
Trigger: GTATCCCTCATGCAGTTGGCATCCAGGCAGCCCTCT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTCTGAAAACTCCGCCTaGAGGGTGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGISENSA*RVCCCR
Trigger: TCTGCAGCAGCACACCCTGCAGGCGGAGTTTTCAGA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAATCATGGTCTGCACTCTaGTCATGGATGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQSWSAL*SWMRFL
Trigger: TAGAAACCTCATCCATGAGCAGAGTGCAGACCATGA...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCGCCCCACGTAATTCATaGTCTGCACCGAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSAPRNS*SAPSGA
Trigger: GGCGCCGCTCGGTGCAGACCATGAATTACGTGGGGC...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256720.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCAGGTTTCCATTGGGCTaGCGGATGACAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTRFPLG*RMTMMS
Trigger: TGACATCATTGTCATCCGCCAGCCCAATGGAAACCT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCTGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAWKGEH*RFPLGW
Trigger: CCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCA...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTTGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILWKGEH*RFPLGW
Trigger: CCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCA...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCTTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCFPKRT*KGEHWR
Trigger: CCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAA...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIFPKRT*KGEHWR
Trigger: CCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCTCTTTCATCTTGTGTaGAGAAGAAGACTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSLFHLV*RRRLSS
Trigger: GCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTTTTCTACTGCTCAATaGGCTGGACTCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNFSTAQ*AGLFHL
Trigger: AAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTTTTCTACTGCTCAATaGGCTGGACTCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GAVHSGETYPLMGDNQALFSTAQ*AGLFHL
Trigger: AAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGACCAGAGTTGGCGATTaGTCACTAAAAGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVTRVGD*SLKVSE
Trigger: TTCAGACACTTTTAGTGACCAATCGCCAACTCTGGT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGACCAGAGTTGGCGATTaGTCACTAAAAGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GETYPLMGDNQALHCWQETRVGD*SLKVSE
Trigger: TTCAGACACTTTTAGTGACCAATCGCCAACTCTGGT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTGTCTTGTTTGCTGTCTaGACTACACTGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILVLFAV*TTLAEG
Trigger: CCCCTCTGCCAGTGTAGTCCAGACAGCAAACAAGAC...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGTTTATCTCTTTTCCTaGAAGGAGAATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNVYLFS*KENPSC
Trigger: ACAAGACGGATTCTCCTTCCAGGAAAAGAGATAAAC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATAAGGATCTCCGTTTTTaGGAAAATACAGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNKDLRF*ENTGPP
Trigger: TGGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACAGCGGCACGTGCCTTaGTACTGCGTGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPQRHVP*YCVVTL
Trigger: CAGTGTCACCACGCAGTACCAAGGCACGTGCCGCTG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAGTTCCACAGATAGATaGTGCCCTCACAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGISSTDR*CPHSGT
Trigger: CGTGCCGCTGTGAGGGCACCATCTATCTGTGGAACT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCAGTTCCACAGATAGATaGTGCCCTCACAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSSSTDR*CPHSGT
Trigger: CGTGCCGCTGTGAGGGCACCATCTATCTGTGGAACT...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGAGTTCCACAGATAGATaGTGCCCTCACAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKSSTDR*CPHSGT
Trigger: CGTGCCGCTGTGAGGGCACCATCTATCTGTGGAACT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCATACGAAGAGATGTTaGTCTTTGCATGTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWHTKRC*SLHVPV
Trigger: TACAGGAACATGCAAAGACCAACATCTCTTCGTATG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCATACGAAGAGATGTTaGTCTTTGCATGTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNHTKRC*SLHVPV
Trigger: TACAGGAACATGCAAAGACCAACATCTCTTCGTATG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCAAAACCGTGCACATCTaGCATTCCTCGATTGACCCT +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTKTVHI*HSSIDP
Trigger: AGGGTCAATCGAGGAATGCCAGATGTGCACGGTTTT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGAAATCTGCGATCGATaGCAGATCTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQEICDR*QICLPL
Trigger: CAAAGGCAAACAGATCTGCCATCGATCGCAGATTTC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGAGAGTGTGACTTTCTaGAAAGCATGCTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: DPVASRFLSETSDPGHMSESVTF*KACSVS
Trigger: TGAAACAGAGCATGCTTTCCAGAAAGTCACACTCTC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CAA 72 bp CAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTaGGCAAAGGCATCCAATGCTAACGGGGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: QICLPLCVHMNH*AKASNANGAHQ
Trigger: TTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CAA 72 bp TTCCTCCTGGGTGCAAAGGAGAAACCGTCTGAACCTTaGCAGGCCCATGAGCTTATACTTAGTTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLLGAKEKPSEP*QAHELILSSEQ
Trigger: CTGCTCTGAACTAAGTATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTTTCTCCTTTGCACCCAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCGTCACTAAAAGTGTCTaGAGATTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTVTKSV*RFAVNG
Trigger: GCCATTCACAGCGAATCTTCAGACACTTTTAGTGAC...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIQDPCL*GHPSRR
Trigger: GCGTCTACTTGGATGACCTCACAGACATGGATCCTG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAQDPCL*GHPSRR
Trigger: GCGTCTACTTGGATGACCTCACAGACATGGATCCTG...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKQDPCL*GHPSRR
Trigger: GCGTCTACTTGGATGACCTCACAGACATGGATCCTG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIQDPCL*GHPSRR
Trigger: GCGTCTACTTGGATGACCTCACAGACATGGATCCTG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLSLAMP*WVQSFP
Trigger: TGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCT...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCGAACAGGGAAAGTCTaGAGAATGGCTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNRTGKV*RMASFQ
Trigger: CTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGCATTAAGCCACAACTaGGGAATGCTTTTCACGGTA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNALSHN*GMLFTV
Trigger: TACCGTGAAAAGCATTCCTCAGTTGTGGCTTAATGC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAAGAAGGTCAGTCTATaGGAAAGAGAGAATAAGGCC +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQKKVSL*ERENKA
Trigger: GGCCTTATTCTCTCTTTCTCATAGACTGACCTTCTT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAACTTGACACAGATCTaGGAGTGTGACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQNLTQI*ECDFLE
Trigger: TTCCAGAAAGTCACACTCTCAGATCTGTGTCAAGTT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCAGCATTCCAGCACATaGCCTCAGCATCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIQHSST*PQHHWV
Trigger: AACCCAGTGATGCTGAGGTCATGTGCTGGAATGCTG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTTAAGCAGGTGGCCTTaGATTCTGGCAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGILSRWP*ILAAHA
Trigger: AGCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGCTACTGGGAGTGGGTaGCCACTCTCTATCCGAATT +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIATGSG*PLSIRI
Trigger: AATTCGGATAGAGAGTGGTCACCCACTCCCAGTAGC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
CDS-3UTR TCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGTTAATGTTTaGAGACCATACATTTCGAAT +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALHVNV*RPYISN
Trigger: ATTCGAAATGTATGGTCTTCAAACATTAACGTGCAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR GCA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCTCTTTACTACAGAGCTaGTTGACGGCGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCSLLQS*LTASRW
Trigger: CCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAAGA...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAISGFF*PVLSVD
Trigger: GTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAAT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACACAAATTTTTCTACTaGTCAATGGGCTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQHKFFY*SMGWTL
Trigger: AAGAGTCCAGCCCATTGAGCAGTAGAAAAATTTGTG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGTCGCTTGCATGTTTTaGGAGTCCGGAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIVACMF*ESGRIS
Trigger: GGAGATCCTTCCGGACTCGCAAAACATGCAAGCGAC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGCTGGAGGATGATTCATaGTTTACCCTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQLEDDS*FTLVAK
Trigger: CTTGGCCACCAGGGTAAAGCATGAATCATCCTCCAG...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTCACGTGCCTTGGTACTaGGTGGTGACACTGAAAACC +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAHVPWY*VVTLKT
Trigger: GGTTTTCAGTGTCACCACGCAGTACCAAGGCACGTG...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCACGTGCCTTGGTACTaGGTGGTGACACTGAAAACC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIHVPWY*VVTLKT
Trigger: GGTTTTCAGTGTCACCACGCAGTACCAAGGCACGTG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCTCCCAGGTGGAGCTGTaGACTCCGGGGAGACCTATC +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSSQVEL*TPGRPI
Trigger: GATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGA...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCATCCCAGGTGGAGCTGTaGACTCCGGGGAGACCTATC +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSSQVEL*TPGRPI
Trigger: GATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGA...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACAGACAGCCGCCTTCTaGCTAGGTTTCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPQTAAF*LGFTAP
Trigger: TGGGGCTGTGAAACCTAGGCAGAAGGCGGCTGTCTG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGCTATAATGGAAATGTaGCCCCTACTTTGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVAIMEM*PLLCQK
Trigger: TTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCCTGCAAAAGGGAATCTaGACATGCACATCCGTGTTT +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTLQKGI*TCTSVF
Trigger: AAACACGGATGTGCATGTGCAGATTCCCTTTTGCAG...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAGGCAGGTGTTAATATaGCAGCCTTGCCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIRQVLI*QPCQGS
Trigger: TGAGCCCTGGCAAGGCTGGCATATTAACACCTGCCT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAAACCAACTCGTATATaGGTGAGTGCAGCCCATATA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQKPTRI*VSAAHI
Trigger: TATATGGGCTGCACTCACGCATATACGAGTTGGTTT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCACGGTGACAAACACCTaGCCGGCTAACTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSTVTNT*PANCPT
Trigger: CGTGGGGCAGTTAGCCGGCCAGGTGTTTGTCACCGT...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCGAGCCCCTTTTCAGCTaGCATTCCATTCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAEPLFS*HSILEA
Trigger: AGCTTCGAGAATGGAATGCCAGCTGAAAAGGGGCTC...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCTTGACGGCGTCTCGCTaGGAGCGATCACTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSLTASR*ERSLGL
Trigger: CAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAA...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAACTCTTTCATCTTGTGTaGAGAAGAAGACTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQLFHLV*RRRLSS
Trigger: GCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAG...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGACCAGAGTTGGCGATTaGTCACTAAAAGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLTRVGD*SLKVSE
Trigger: TTCAGACACTTTTAGTGACCAATCGCCAACTCTGGT...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCCCCACCGACCAGAGTTaGCGATTGGTCACTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAPTDQS*RLVTKS
Trigger: ACTTTTAGTGACCAATCGCCAACTCTGGTCGGTGGG...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGTTTATCTCTTTTCCTaGAAGGAGAATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSVYLFS*KENPSC
Trigger: ACAAGACGGATTCTCCTTCCAGGAAAAGAGATAAAC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILFHSGL*QRFLEG
Trigger: GCCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCAGCGGCACGTGCCTTaGTACTGCGTGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSQRHVP*YCVVTL
Trigger: CAGTGTCACCACGCAGTACCAAGGCACGTGCCGCTG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCAATCCTTCCCAAGGGTaGGCAAAATGTGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSANPSQG*AKCGQE
Trigger: CTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACATACGAAGAGATGTTaGTCTTTGCATGTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SGETYPLMGDNQALHCWQHTKRC*SLHVPV
Trigger: TACAGGAACATGCAAAGACCAACATCTCTTCGTATG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNLVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGAAATCTGCGATCGATaGCAGATCTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNEICDR*QICLPL
Trigger: CAAAGGCAAACAGATCTGCCATCGATCGCAGATTTC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGCTGCTCATGCGAACCTaGGTCTCCTGGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQLLMRT*VSWWIL
Trigger: GAGAATCCACCAGGAGACCCAGGTTCGCATGAGCAG...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCGGACTTTCCGAAGGATaGAACAGGGAAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAGLSEG*NREDCG
Trigger: TCCACAGTCTTCCCTGTTCCATCCTTCGGAAAGTCC...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
CDS-3UTR TCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGATCACTTTTAGGTGTTaGAGGTCGGGAACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKITFRC*RSGTGR
Trigger: CCTTCCGGTTCCCGACCTTCAACACCTAAAAGTGAT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGGGAAAAACAGGTTTTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLGKTGF*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAAAACCTGTTTTTCC...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGGAAAAACAGGTTTTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQGKTGF*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAAAACCTGTTTTTCC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCCTATCCTTTAATGGGTaGCAACCAGGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCLSFNG*QPGSAL
Trigger: CAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAG...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAGCCCCAAACTGCACGTaGACCAGTAGCTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPAPNCT*TSSYLL
Trigger: CAGCAAGTAGCTACTGGTTCACGTGCAGTTTGGGGC...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCCGCTTGCCCTTAATTTaGGTGGAAAAAGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTRLPLI*VEKAKE
Trigger: TTCCTTAGCTTTTTCCACTCAAATTAAGGGCAAGCG...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCISGFF*PVLSVD
Trigger: GTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAAT...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGAGAAGACTTAGCAGCCTaGGGCAGCTCTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQREDLAA*GSSPHS
Trigger: GCTGTGGGGAGAGCTGCCGCAGGCTGCTAAGTCTTC...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCTTCAAGCTTTTAAGCTaGTCGGAAGTCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAFKLLS*SEVSRR
Trigger: TCTCCGGCTGACTTCCGAGCAGCTTAAAAGCTTGAA...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAAAGACACTCCTACTTaGTTGTATGAATACACATCA +
Preference number: 4 (lower is better)
Translates to: AVHSGETYPLMGDNQALHKDTPT*LYEYTS
Trigger: TGATGTGTATTCATACAAGCAAGTAGGAGTGTCTTT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAAAGACACTCCTACTTaGTTGTATGAATACACATCA +
Preference number: 4 (lower is better)
Translates to: HSGETYPLMGDNQALHCWKDTPT*LYEYTS
Trigger: TGATGTGTATTCATACAAGCAAGTAGGAGTGTCTTT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGCTGCTGGCAAGAGGCTaGTTGGGACATTTTACGCTG +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQLLARG*LGHFTL
Trigger: CAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAGCAG...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAGTGACAACCAGGCTCTaGACTGCTGGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSVTTRL*TAGKRL
Trigger: CAGCCTCTTGCCAGCAGTGCAGAGCCTGGTTGTCAC...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGGGGCAGGGGAGAAATaGTTCTCAATTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIGAGEK*FSILSA
Trigger: AGCAGAGAGAATTGAGAAGCATTTCTCCCCTGCCCC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGGGGCAGGGGAGAAATaGTTCTCAATTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIGAGEK*FSILSA
Trigger: AGCAGAGAGAATTGAGAAGCATTTCTCCCCTGCCCC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCCTTTGCCAAAAACCGTaGACATCTGGCATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSALCQKP*TSGIPR
Trigger: TCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAG...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCATGTGCCCCCTACTTTaGCAAAAACCGTGCACATCT +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAMCPLL*QKPCTS
Trigger: AGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGCTATAATGGAAATGTaGCCCCTACTTTGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQAIMEM*PLLCQK
Trigger: TTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCATGCCTGGATGCCAACTaGATGAGGGATACATCCCCC +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPCLDAN*MRDTSP
Trigger: GGGGGATGTATCCCTCATGCAGTTGGCATCCAGGCA...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTCGTATATGCGTGAGTaGAGCCCATATACAAATCTC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTSYMRE*SPYTNL
Trigger: GAGATTTGTATATGGGCTGCACTCACGCATATACGA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATAAACCAACTCGTATATaGGTGAGTGCAGCCCATATA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNKPTRI*VSAAHI
Trigger: TATATGGGCTGCACTCACGCATATACGAGTTGGTTT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCAGGTTTCCATTGGGCTaGCGGATGACAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSARFPLG*RMTMMS
Trigger: TGACATCATTGTCATCCGCCAGCCCAATGGAAACCT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGCCGAGCTCATCTCGATaGGGAACATGTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQPSSSR*GTCPHP
Trigger: AGGATGAGGACATGTTCCCCATCGAGATGAGCTCGG...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIQPKHF*VLLPCP
Trigger: AGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTCCCACCGACCAGAGTTaGCGATTGGTCACTAAAAGT +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAPTDQS*RLVTKS
Trigger: ACTTTTAGTGACCAATCGCCAACTCTGGTCGGTGGG...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGAAGGATCTCCGTTTTTaGGAAAATACAGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQKDLRF*ENTGPP
Trigger: TGGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTT...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCAAGGATCTCCGTTTTTaGGAAAATACAGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAKDLRF*ENTGPP
Trigger: TGGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCTTTGGCAAAGGTTTCTaGAAGGCCTGCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCFGKGF*KACIAR
Trigger: CCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAA...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCAGCCAAGCACTGCTCTaGCTTACTTTCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSASQALL*LTFLLD
Trigger: ATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCAGGGTGGGCAAAATGTaGCCAAGAGTATCTGATCTG +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSARVGKM*PRVSDL
Trigger: CAGATCAGATACTCTTGGCCACATTTTGCCCACCCT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTAATTTATATCCATTCTaGCTCACTTTATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: GGAVHSGETYPLMGDNQANLYPF*LTLWYS
Trigger: GCTGTACCATAAAGTGAGCCAGAATGGATATAAATT...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGAGAGTGTGACTTTCTaGAAAGCATGCTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNESVTF*KACSVS
Trigger: TGAAACAGAGCATGCTTTCCAGAAAGTCACACTCTC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACCAGGCTACTGGGAGTaGGTGACCACTCTCTATCCG +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSPGYWE*VTTLYP
Trigger: CGGATAGAGAGTGGTCACCCACTCCCAGTAGCCTGG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
CDS-3UTR CCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTGGACTTTCCGAAGGATaGAACAGGGAAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAGLSEG*NREDCG
Trigger: TCCACAGTCTTCCCTGTTCCATCCTTCGGAAAGTCC...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGATCACTTTTAGGTGTTaGAGGTCGGGAACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQITFRC*RSGTGR
Trigger: CCTTCCGGTTCCCGACCTTCAACACCTAAAAGTGAT...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGAGAATCCGTCTTGTTTaGTGTCTGGACTACACTGGC +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKRIRLV*CLDYTG
Trigger: GCCAGTGTAGTCCAGACAGCAAACAAGACGGATTCT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTAGAATCCGTCTTGTTTaGTGTCTGGACTACACTGGC +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPARIRLV*CLDYTG
Trigger: GCCAGTGTAGTCCAGACAGCAAACAAGACGGATTCT...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCGGCTCCGTTGTCGCTTaGATGTTTTGCGAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSGSVVA*MFCESG
Trigger: TCCGGACTCGCAAAACATGCAAGCGACAACGGAGCC...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCATTGCCAGCCAAGCACTaGTCTGGCTTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPLPAKH*SGLLSS
Trigger: GGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAA...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTTCAAGCTTTTAAGCTaGTCGGAAGTCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIFKLLS*SEVSRR
Trigger: TCTCCGGCTGACTTCCGAGCAGCTTAAAAGCTTGAA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTATGTGCCCCCTACTTTaGCAAAAACCGTGCACATCT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIMCPLL*QKPCTS
Trigger: AGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTTCAGATAAAGGCCCCTaGTCATGCGAACCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFSDKGP*SCEPGS
Trigger: AGACCCAGGTTCGCATGAGCAGGGGCCTTTATCTGA...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGATGCACCCTGAGAGTGTaGCGGGATTCAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRCTLRV*RDSAPC
Trigger: ACAAGGGGCTGAATCCCGCCACACTCTCAGGGTGCA...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCATGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPWKGEH*RFPLGW
Trigger: CCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCA...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAAGGATCTCCGTTTTTaGGAAAATACAGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIKDLRF*ENTGPP
Trigger: TGGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLFHSGL*QRFLEG
Trigger: GCCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAGCCAAGCACTGCTCTaGCTTACTTTCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGISQALL*LTFLLD
Trigger: ATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCAGCCAAGCACTGCTCTaGCTTACTTTCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSSQALL*LTFLLD
Trigger: ATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCT...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATTGCTCTCCGGTGCTATaGGCCTTGCCAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYCSPVL*ALPAKH
Trigger: GTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCA...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCGCGCTCCTCATCACTaGAGGATGATTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKRAPHH*RMIHAL
Trigger: TAAAGCATGAATCATCCTCCAGTGATGAGGAGCGCG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTTCTGGCTCACTTTATaGTACAGCTTAGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIFWLTL*YSLAMP
Trigger: GGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTTCTGGCTCACTTTATaGTACAGCTTAGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSFWLTL*YSLAMP
Trigger: GGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAA...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTTCTGGCTCACTTTATaGTACAGCTTAGCGATGCCC +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIFWLTL*YSLAMP
Trigger: GGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCGAAATCTGCGATCGATaGCAGATCTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAEICDR*QICLPL
Trigger: CAAAGGCAAACAGATCTGCCATCGATCGCAGATTTC...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTGGACTTTCCGAAGGATaGAACAGGGAAGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLGLSEG*NREDCG
Trigger: TCCACAGTCTTCCCTGTTCCATCCTTCGGAAAGTCC...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000674199.1
3UTR CAA 72 bp ACAGAAATCTGCGATCGATGGCAGATCTGTTTGCCTTaGTGTGTCCACATGAACCATTTGGCAAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: TEICDRWQICLP*CVHMNHLAKAS
Trigger: GGATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCAACTGCATTTCTGTCTaGGGCTTGTTCTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGINCISV*GLFWSK
Trigger: TTTGGACCAGAACAAGCCTCAGACAGAAATGCAGTT...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCACAAACTGTTGATATaGCACAGCTTGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKHKLLI*HSLLQE
Trigger: TTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTTGTCCACAAACTGTTaGTATGACACAGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGILSTNC*YDTACS
Trigger: GGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTTGTCCACAAACTGTTaGTATGACACAGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSLSTNC*YDTACS
Trigger: GGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAA...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTCCTACTTGCTTGTATaGATACACATCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSSYLLV*IHISWS
Trigger: CGACCAGCTGATGTGTATTCATACAAGCAAGTAGGA...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTCGAACAGGGAAAGTCTaGAGAATGGCTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPARTGKV*RMASFQ
Trigger: CTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCG...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGCAGGAGGAGGGGTGCTaGTGTTGTCCAGTTATAATA +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQQEEGC*CCPVII
Trigger: TATTATAACTGGACAACAGCAGCACCCCTCCTCCTG...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCTTGCCAGCCAAGCACTaGTCTGGCTTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSLPAKH*SGLLSS
Trigger: GGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAA...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGAAGGGAATCTGCACATaGACATCCGTGTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKKGICT*TSVFLQ
Trigger: CTGTAGAAACACGGATGTGCATGTGCAGATTCCCTT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCTGCAAAAGGGAATCTaGACATGCACATCCGTGTTT +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKLQKGI*TCTSVF
Trigger: AAACACGGATGTGCATGTGCAGATTCCCTTTTGCAG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCTCGTATATGCGTGAGTaGAGCCCATATACAAATCTC +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSASYMRE*SPYTNL
Trigger: GAGATTTGTATATGGGCTGCACTCACGCATATACGA...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTAGCCAAGCACTGCTCTaGCTTACTTTCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLSQALL*LTFLLD
Trigger: ATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCT...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAAATTTATATCCATTCTaGCTCACTTTATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: HLAKASNANGAHQLQRRQNLYPF*LTLWYS
Trigger: GCTGTACCATAAAGTGAGCCAGAATGGATATAAATT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQSNGKT*STTSQS
Trigger: ACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCT...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGILVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGAAATCTGCGATCGATaGCAGATCTGTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIEICDR*QICLPL
Trigger: CAAAGGCAAACAGATCTGCCATCGATCGCAGATTTC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCCAGGGTGCAGTGATGTaGAAGTTTAAGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAQGAVM*KFKVHQ
Trigger: TTGATGTACCTTAAACTTCCACATCACTGCACCCTG...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATGATGTCAATGCACCCTaGGAGTGTGGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYDVNAP*ECGGIQ
Trigger: CTGAATCCCGCCACACTCTCAGGGTGCATTGACATC...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGAAGAAGGTCAGTCTATaGGAAAGAGAGAATAAGGCC +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKKKVSL*ERENKA
Trigger: GGCCTTATTCTCTCTTTCTCATAGACTGACCTTCTT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCAACTCGTATATGCGTaGGTGCAGCCCATATACAAA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLQLVYA*VQPIYK
Trigger: TTTGTATATGGGCTGCACTCACGCATATACGAGTTG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSISGFF*PVLSVD
Trigger: GTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAAT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACAGGAGGAGGGGTGCTaGTGTTGTCCAGTTATAATA +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPQEEGC*CCPVII
Trigger: TATTATAACTGGACAACAGCAGCACCCCTCCTCCTG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCTGGAGGATGATTCATaGTTTACCCTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSLEDDS*FTLVAK
Trigger: CTTGGCCACCAGGGTAAAGCATGAATCATCCTCCAG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCATCAATCACTTCTCTGTaGAGGGCAGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSSITSL*RAEKRL
Trigger: CAGCCTCTTCTCTGCCCTGCACAGAGAAGTGATTGA...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTACTTTCTGGAAAGCATaGTCTGTTTCAGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLTFWKA*SVSGCS
Trigger: ACTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGT...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGAAACCAACTCGTATATaGGTGAGTGCAGCCCATATA +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKKPTRI*VSAAHI
Trigger: TATATGGGCTGCACTCACGCATATACGAGTTGGTTT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGAGAGGGGCAGTCCTTTTaGAATCTACCAGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQREGQSF*NLPGYW
Trigger: CCAGTAGCCTGGTAGATTGCAAAAGGACTGCCCCTC...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCTCTTTCATCTTGTGTaGAGAAGAAGACTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: MADLFAFVCPHEPFGKGILFHLV*RRRLSS
Trigger: GCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTACCAGAGTTGGCGATTaGTCACTAAAAGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGITRVGD*SLKVSE
Trigger: TTCAGACACTTTTAGTGACCAATCGCCAACTCTGGT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACGCGCTCCTCATCACTaGAGGATGATTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPRAPHH*RMIHAL
Trigger: TAAAGCATGAATCATCCTCCAGTGATGAGGAGCGCG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCAATTTATATCCATTCTaGCTCACTTTATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTNLYPF*LTLWYS
Trigger: GCTGTACCATAAAGTGAGCCAGAATGGATATAAATT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCATACGAAGAGATGTTaGTCTTTGCATGTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: ILAHFMVQLSDALMGPILHTKRC*SLHVPV
Trigger: TACAGGAACATGCAAAGACCAACATCTCTTCGTATG...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCAGGGTGCAGTGATGTaGAAGTTTAAGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIQGAVM*KFKVHQ
Trigger: TTGATGTACCTTAAACTTCCACATCACTGCACCCTG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
3UTR CAA 72 bp GTTTCTACAGAAATCTGCGATCGATGGCAGATCTGTTaGCCTTTGTGTGTCCACATGAACCATTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VSTEICDRWQIC*PLCVHMNHLAK
Trigger: CTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCATCGATCGCAGATTTCTGTAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTTTCCGTGGACTTGCTaGCCAATTCTGAATCACTTT +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLFPWTC*PILNHF
Trigger: AAAGTGATTCAGAATTGGTCAGCAAGTCCACGGAAA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGTTTCCGTGGACTTGCTaGCCAATTCTGAATCACTTT +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQFPWTC*PILNHF
Trigger: AAAGTGATTCAGAATTGGTCAGCAAGTCCACGGAAA...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR TCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAAACTGCATTTCTGTCTaGGGCTTGTTCTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPNCISV*GLFWSK
Trigger: TTTGGACCAGAACAAGCCTCAGACAGAAATGCAGTT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCGCTTGCCCTTAATTTaGGTGGAAAAAGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLRLPLI*VEKAKE
Trigger: TTCCTTAGCTTTTTCCACTCAAATTAAGGGCAAGCG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGGTGTGCTTACAGTGGTaGTCCAAACATAAAATTGCA +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKVCLQW*SKHKIA
Trigger: TGCAATTTTATGTTTGGATCACCACTGTAAGCACAC...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGTGTGCTTACAGTGGTaGTCCAAACATAAAATTGCA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIVCLQW*SKHKIA
Trigger: TGCAATTTTATGTTTGGATCACCACTGTAAGCACAC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATGCTACTGGGAGTGGGTaGCCACTCTCTATCCGAATT +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYATGSG*PLSIRI
Trigger: AATTCGGATAGAGAGTGGTCACCCACTCCCAGTAGC...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATTTGCCAGCCAAGCACTaGTCTGGCTTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYLPAKH*SGLLSS
Trigger: GGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAA...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCATTCAAGCTTTTAAGCTaGTCGGAAGTCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSFKLLS*SEVSRR
Trigger: TCTCCGGCTGACTTCCGAGCAGCTTAAAAGCTTGAA...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCAACCGTCTGAACCTTTaGAGGCCCATGAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSNRLNL*RPMSLY
Trigger: GTATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTT...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTAAACCAACTCGTATATaGGTGAGTGCAGCCCATATA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLKPTRI*VSAAHI
Trigger: TATATGGGCTGCACTCACGCATATACGAGTTGGTTT...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGCTCTTTCATCTTGTGTaGAGAAGAAGACTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQLFHLV*RRRLSS
Trigger: GCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAG...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTTTTCTACTGCTCAATaGGCTGGACTCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIFSTAQ*AGLFHL
Trigger: AAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGGTTTATCTCTTTTCCTaGAAGGAGAATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKVYLFS*KENPSC
Trigger: ACAAGACGGATTCTCCTTCCAGGAAAAGAGATAAAC...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGTTTATCTCTTTTCCTaGAAGGAGAATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIVYLFS*KENPSC
Trigger: ACAAGACGGATTCTCCTTCCAGGAAAAGAGATAAAC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSSNGKT*STTSQS
Trigger: ACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCACAAACTGTTGATATaGCACAGCTTGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSHKLLI*HSLLQE
Trigger: TTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCGAACAGGGAAAGTCTaGAGAATGGCTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSRTGKV*RMASFQ
Trigger: CTGAAAAGAAGCCATTCTTCAGACTTTCCCTGTTCG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTGGGGAGATATGCCAATaGAATAGACTATCTTTAACC +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLGEICQ*NRLSLT
Trigger: GGTTAAAGATAGTCTATTTCATTGGCATATCTCCCC...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCACTTTCTGGAAAGCATaGTCTGTTTCAGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSTFWKA*SVSGCS
Trigger: ACTGCACCCTGAAACAGAGCATGCTTTCCAGAAAGT...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCATCATGGTCTGCACTCTaGTCATGGATGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSSWSAL*SWMRFL
Trigger: TAGAAACCTCATCCATGAGCAGAGTGCAGACCATGA...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR GCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATTCAACTTCAAGAAGCTaGTCGGAAGTCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYSTSRS*SEVSRR
Trigger: TCTCCGGCTGACTTCCGAGCAGCTTCTTGAAGTTGA...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGAAGGTTTCCATTGGGCTaGCGGATGACAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRRFPLG*RMTMMS
Trigger: TGACATCATTGTCATCCGCCAGCCCAATGGAAACCT...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCATACTGCTCAATGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSYCSMG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTA...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCTACTGCTCAATGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSYCSMG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTA...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTTTTCTACTGCTCAATaGGCTGGACTCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLFSTAQ*AGLFHL
Trigger: AAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCATACGAAGAGATGTTaGTCTTTGCATGTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLHTKRC*SLHVPV
Trigger: TACAGGAACATGCAAAGACCAACATCTCTTCGTATG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR TCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAAAGAAGGTCAGTCTATaGGAAAGAGAGAATAAGGCC +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSKKVSL*ERENKA
Trigger: GGCCTTATTCTCTCTTTCTCATAGACTGACCTTCTT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAAAGACACTCCTACTTaGTTGTATGAATACACATCA +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIKDTPT*LYEYTS
Trigger: TGATGTGTATTCATACAAGCAAGTAGGAGTGTCTTT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGATACTGCTCAATGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRYCSMG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTA...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTAATTTATATCCATTCTaGCTCACTTTATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGINLYPF*LTLWYS
Trigger: GCTGTACCATAAAGTGAGCCAGAATGGATATAAATT...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTAATTTATATCCATTCTaGCTCACTTTATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPANLYPF*LTLWYS
Trigger: GCTGTACCATAAAGTGAGCCAGAATGGATATAAATT...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGATTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACATACGAAGAGATGTTaGTCTTTGCATGTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: DKPTRICVSAAHIQISLSHTKRC*SLHVPV
Trigger: TACAGGAACATGCAAAGACCAACATCTCTTCGTATG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGAGTTTATCTCTTTTCCTaGAAGGAGAATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRVYLFS*KENPSC
Trigger: ACAAGACGGATTCTCCTTCCAGGAAAAGAGATAAAC...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAAATTTATATCCATTCTaGCTCACTTTATGGTACAGC +
Preference number: 4 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPNLYPF*LTLWYS
Trigger: GCTGTACCATAAAGTGAGCCAGAATGGATATAAATT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR GCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATCACAAATTTTTCTACTaGTCAATGGGCTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYHKFFY*SMGWTL
Trigger: AAGAGTCCAGCCCATTGAGCAGTAGAAAAATTTGTG...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CCA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATTTTTCTACTGCTCAATaGGCTGGACTCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYFSTAQ*AGLFHL
Trigger: AAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAA...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396099.5
3UTR CAA 72 bp ACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTaGTATGAATACACATCAGCTGGTCGGTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: TVNILFKDTPTC*YEYTSAGRFPK
Trigger: TTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR GCA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGAAAAGACACTCCTACTTaGTTGTATGAATACACATCA +
Preference number: 4 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRKDTPT*LYEYTS
Trigger: TGATGTGTATTCATACAAGCAAGTAGGAGTGTCTTT...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS GCA 90 bp TCAGCCCGTCCGAGGTGCTCTCCACGCCACTGTCCACGCCCGAGCTaGCCACCGACTGCGGGGACTGGTTGGCTGACCGGGCTCCGTTGT +
Preference number: 5 (lower is better)
Translates to: SARPRCSPRHCPRPS*PPTAGTGWLTGLRC
Trigger: ACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCGTGGAGAGCACCTCGGACGGGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 90 bp TTCATGGTCTGCACCGAGCGGCGCCGCGCGTGGCCGCCTTTGTATTaGAAACACCCAGCCCGCCGCCGGCTGTCAGCGCAGCTCGCCTTC +
Preference number: 5 (lower is better)
Translates to: FMVCTERRRAWPPLY*KHPARRRLSAQLAF
Trigger: GAAGGCGAGCTGCGCTGACAGCCGGCGGCGGGCTGGGTGTTTGCAATACAAAGGCGGCCACGCGCGGCGCCGCTCGGTGCAGACCATGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256720.6
CDS GCA 90 bp AGAGGGAGATGGCGATGGAAGGGAGGTCCCTCAGCCCGTCCGAGGTaGTCTCCACGCCACTGTCCACGCCCGAGCTGCCCACCGACTGCG +
Preference number: 5 (lower is better)
Translates to: RGRWRWKGGPSARPR*SPRHCPRPSCPPTA
Trigger: CGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCGTGGAGAGCACCTCGGACGGGCTGAGGGACCTCCCTTCCATCGCCATCTCCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 90 bp GAGGTGCTCTCCACGCCACTGTCCACGCCCGAGCTGCCCACCGACTaGGGGGACTGGTTGGCTGACCGGGCTCCGTTGTCGCTTGCATGT +
Preference number: 5 (lower is better)
Translates to: EVLSTPLSTPELPTD*GDWLADRAPLSLAC
Trigger: ACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCGTGGAGAGCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 90 bp CGCCACTGTCCACGCCCGAGCTGCCCACCGACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGTCGCTTGCATGTTTTGCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: RHCPRPSCPPTAGTG*LTGLRCRLHVLRVR
Trigger: CCGGACTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 90 bp CTGGGGAGCTCTTGCCCTGCGAGGTCTCCCAGCTGGAGCTGCGAATaGCGTCCTGTTCCCCCATGGCCCGCCCTGTATGGTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LGSSCPARSPSWSCE*RPVPPWPALYGAVC
Trigger: GCAGACAGCACCATACAGGGCGGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS GCA 90 bp CCGAGTCTGGGGAGCTCTTGCCCTGCGAGGTCTCCCAGCTGGAGCTaGGAATGCCGTCCTGTTCCCCCATGGCCCGCCCTGTATGGTGCT +
Preference number: 5 (lower is better)
Translates to: PSLGSSCPARSPSWS*ECRPVPPWPALYGA
Trigger: AGCACCATACAGGGCGGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS TCA 90 bp ACTGTCCACGCCCGAGCTGCCCACCGACTGCGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCTTGCATGTTTTGCGAGTCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: TVHARAAHRLRGLVG*PGSVVACMFCESGR
Trigger: CCTTCCGGACTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 90 bp TCCACGCCACTGTCCACGCCCGAGCTGCCCACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCGTTGTCGCTTGCATGTTTTGCGAGT +
Preference number: 5 (lower is better)
Translates to: STPLSTPELPTDCGD*LADRAPLSLACFAS
Trigger: ACTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 90 bp GCGAGGTCTCCCAGCTGGAGCTGCGAATGCCGTCCTGTTCCCCCATaGCCCGCCCTGTATGGTGCTGTCTGCCTCCTCACCCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: ARSPSWSCECRPVPP*PALYGAVCLLTQHQ
Trigger: CTGATGCTGGGTGAGGAGGCAGACAGCACCATACAGGGCGGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS CCA 90 bp ACCAAGCCGAGTCTGGGGAGCTCTTGCCCTGCGAGGTCTCCCAGCTaGAGCTGCGAATGCCGTCCTGTTCCCCCATGGCCCGCCCTGTAT +
Preference number: 5 (lower is better)
Translates to: TKPSLGSSCPARSPS*SCECRPVPPWPALY
Trigger: ATACAGGGCGGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACTCGGCTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS-3UTR CAA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGACCTGCGTTTGATGGCTaGGCAGCTGCGCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGPAFDG*AAARSS
Trigger: TGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAGG...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGGGCTCCGTTGTCGCTaGCATGTTTTGCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGGLRCR*HVLRVR
Trigger: CCGGACTCGCAAAACATGCAAGCGACAACGGAGCCC...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS GCA 90 bp ACCCCTGTCCTTCATCCTGATGGTGACAGCCTCCACTCCCGCCTCTaGCAAGCGGTGGTCCAGGTGCGGAACGGTGGCTCTGAACAGGAG +
Preference number: 5 (lower is better)
Translates to: TPVLHPDGDSLHSRL*QAVVQVRNGGSEQE
Trigger: CTCCTGTTCAGAGCCACCGTTCCGCACCTGGACCACCGCTTGGCAGAGGCGGGAGTGGAGGCTGTCACCATCAGGATGAAGGACAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464517.5
ENST00000480315.1
CDS CCA 90 bp TCAGCAGGCTGGGCCACTGCTGGGTGGCTGCTGTTAGGACAGGCATaGCTGGCCCCGGTCTTGCCCTTCATCTCTCTTCCCTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SAGWATAGWLLLGQA*LAPVLPFISLPSCS
Trigger: GGAACAGGAGGGAAGAGAGATGAAGGGCAAGACCGGGGCCAGCCATGCCTGTCCTAACAGCAGCCACCCAGCAGTGGCCCAGCCTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000464517.5
ENST00000480315.1
ENST00000495907.5
CDS CCA 90 bp TTCATCCTGATGGTGACAGCCTCCACTCCCGCCTCTGCCAAGCGGTaGTCCAGGTGCGGAACGGTGGCTCTGAACAGGAGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: FILMVTASTPASAKR*SRCGTVALNRRDRQ
Trigger: CTGCCTGTCCCTCCTGTTCAGAGCCACCGTTCCGCACCTGGACCACCGCTTGGCAGAGGCGGGAGTGGAGGCTGTCACCATCAGGATGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464517.5
ENST00000480315.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGCTGGGAGCGATCACTaGGGCTGGCGTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDAGSDH*GWRAGV
Trigger: GACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGATTACTACAGAGCTGCTaGACGGCGTCTCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGLLQSC*TASRWE
Trigger: CTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAA...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS CCA 90 bp ACCCTGGTGGCCAAGCTGAGCTGCGGCGGTTGCTCTCCGGTGCTATaGGCCTTGCCAGCCAAGCACTGCTCTGGCTTACTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TLVAKLSCGGCSPVL*ALPAKHCSGLLSSL
Trigger: CAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGCTGGGAGCGATCACTaGGGCTGGCGTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWAGSDH*GWRAGV
Trigger: GACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGACTGCGGGGACTGGTaGGCTGACCGGGCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNDCGDW*ADRAPL
Trigger: CAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGACTGCGGGGACTGGTaGGCTGACCGGGCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCDCGDW*ADRAPL
Trigger: CAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGCTGAGCTGCGGCGGTaGCTCTCCGGTGCTATGGGC +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNAELRR*LSGAMG
Trigger: GCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGCTGAGCTGCGGCGGTaGCTCTCCGGTGCTATGGGC +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALAELRR*LSGAMG
Trigger: GCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGGAGGTGGCCTGCGTTaGATGGCTTGGCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDGGGLR*MAWQLR
Trigger: GCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTCC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS TCA 90 bp CTCTTCTCCTCTCCCGTTTATTCACCTGATGGTTTGGCGGACTCGTaGAGCCACGTGGTTGCAAATACGAGCGGCGCCGCGCGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: LFSSPVYSPDGLADS*SHVVANTSGAARGR
Trigger: GCGGCCACGCGCGGCGCCGCTCGTATTTGCAACCACGTGGCTTCACGAGTCCGCCAAACCATCAGGTGAATAAACGGGAGAGGAGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS TCA 90 bp CCAACAGTTACAGAGCCAGGAGGTGACACCTATGCTGCTGGCTCCTaGCCTTCCTCCCCACCTTCCCCACGTTCCACGAGCACTCGCCCT +
Preference number: 5 (lower is better)
Translates to: PTVTEPGGDTYAAGS*PSSPPSPRSTSTRP
Trigger: AGGGCGAGTGCTCGTGGAACGTGGGGAAGGTGGGGAGGAAGGTCAGGAGCCAGCAGCATAGGTGTCACCTCCTGGCTCTGTAACTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS GCA 90 bp GATGATTCATGCTTTACCCTGGTGGCCAAGCTGAGCTGCGGCGGTTaGTCTCCGGTGCTATGGGCCTTGCCAGCCAAGCACTGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: DDSCFTLVAKLSCGG*SPVLWALPAKHCSG
Trigger: GCCAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGGTAAAGCATGAATCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS CCA 90 bp TTTACTACAGAGCTGCTTGACGGCGTCTCGCTGGGAGCGATCACTTaGGCTGGCGTGCTGGGGTCCAGGCCTCTCATCCTGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: FTTELLDGVSLGAIT*AGVLGSRPLILSTE
Trigger: CTCTGTGGACAGGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGCTGGGAGCGATCACTaGGGCTGGCGTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQAGSDH*GWRAGV
Trigger: GACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGACTGCGGGGACTGGTaGGCTGACCGGGCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQEDCGDW*ADRAPL
Trigger: CAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGCTGAGCTGCGGCGGTaGCTCTCCGGTGCTATGGGC +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQAELRR*LSGAMG
Trigger: GCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGAGGTGGCCTGCGTTaGATGGCTTGGCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGGGLR*MAWQLR
Trigger: GCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGGAGGTGGCCTGCGTTaGATGGCTTGGCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCGGGLR*MAWQLR
Trigger: GCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTCC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGGAGGTGGCCTGCGTTaGATGGCTTGGCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALGGGLR*MAWQLR
Trigger: GCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTCC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS TCA 90 bp GGAGTGACTGGACCACAGTCTCCCAACAGTTACAGAGCCAGGAGGTaGCACCTATGCTGCTGGCTCCTGACCTTCCTCCCCACCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GVTGPQSPNSYRARR*HLCCWLLTFLPTFP
Trigger: GGGGAAGGTGGGGAGGAAGGTCAGGAGCCAGCAGCATAGGTGTCACCTCCTGGCTCTGTAACTGTTGGGAGACTGTGGTCCAGTCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS GCA 90 bp ATTATTGGAATCCATGACCAAGCCGAGTCTGGGGAGCTCTTGCCCTaGGAGGTCTCCCAGCTGGAGCTGCGAATGCCGTCCTGTTCCCCC +
Preference number: 5 (lower is better)
Translates to: IIGIHDQAESGELLP*EVSQLELRMPSCSP
Trigger: GGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACTCGGCTTGGTCATGGATTCCAATAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS GCA 90 bp TGCCCCTCCCTGGTTGAGGTGCAGCCCTCTCTGCAAGTCACCCCGTaGTGGGACAGGAAAGATTCCATATGCAGAGTGCGGTGCACACAC +
Preference number: 5 (lower is better)
Translates to: CPSLVEVQPSLQVTP*WDRKDSICRVRCTH
Trigger: GTGTGTGCACCGCACTCTGCATATGGAATCTTTCCTGTCCCAGCACGGGGTGACTTGCAGAGAGGGCTGCACCTCAACCAGGGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS CCA 90 bp CCCTCCCTGGTTGAGGTGCAGCCCTCTCTGCAAGTCACCCCGTGCTaGGACAGGAAAGATTCCATATGCAGAGTGCGGTGCACACACCAG +
Preference number: 5 (lower is better)
Translates to: PSLVEVQPSLQVTPC*DRKDSICRVRCTHQ
Trigger: CTGGTGTGTGCACCGCACTCTGCATATGGAATCTTTCCTGTCCCAGCACGGGGTGACTTGCAGAGAGGGCTGCACCTCAACCAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGTGGCCGCCTTTGTATaGCAAACACCCAGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNVAAFV*QTPSPP
Trigger: CGGCGGGCTGGGTGTTTGCAATACAAAGGCGGCCAC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256720.6
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGCTGACCGGGCTCCGTaGTCGCTTGCATGTTTTGCG +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDADRAP*SLACFA
Trigger: CGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTCTGGAAGGCCTGCATaGCCAGGAGGAGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALSGRPA*PGGGVL
Trigger: CAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCCGGTGCTATGGGCCTaGCCAGCCAAGCACTGCTCT +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNPVLWA*PAKHCS
Trigger: AGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGG...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCCGGTGCTATGGGCCTaGCCAGCCAAGCACTGCTCT +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWPVLWA*PAKHCS
Trigger: AGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGGCTGAGCTGCGGCGGTaGCTCTCCGGTGCTATGGGC +
Preference number: 5 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLAELRR*LSGAMG
Trigger: GCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGC...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCCTGCGTTTGATGGCTaGGCAGCTGCGCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWPAFDG*AAARSS
Trigger: TGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAGG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCCTGCGTTTGATGGCTaGGCAGCTGCGCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCPAFDG*AAARSS
Trigger: TGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAGG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACACAGCGGCACGTGCCTaGGTACTGCGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDTAARA*VLRGDT
Trigger: AGTGTCACCACGCAGTACCAAGGCACGTGCCGCTGT...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGTTAATATGCCAGCCTaGCCAGGGCTCACATTGAAC +
Preference number: 5 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGVNMPA*PGLTLN
Trigger: GTTCAATGTGAGCCCTGGCAAGGCTGGCATATTAAC...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTGGCTGGCCCCGGTCTaGCCCTTCATCTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNWLAPV*PFISLP
Trigger: GGGAAGAGAGATGAAGGGCAAGACCGGGGCCAGCCA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCTGGGGAGCTCTaGCCCTGCGAGGTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQESGEL*PCEVSQ
Trigger: CTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACTC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS GCA 90 bp GGTCTTGCCCTTCATCTCTCTTCCCTCCTGTTCCTTCCCTCAGGCTaGCTCCTCGCCTCCCATCCTCTCTCCCTCTCCAGCTTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: GLALHLSSLLFLPSG*LLASHPLSLSSLLS
Trigger: TGAAAGCAAGCTGGAGAGGGAGAGAGGATGGGAGGCGAGGAGGCAGCCTGAGGGAAGGAACAGGAGGGAAGAGAGATGAAGGGCAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS GCA 90 bp CCCTCTCTGCAAGTCACCCCGTGCTGGGACAGGAAAGATTCCATATaGAGAGTGCGGTGCACACACCAGCGTTCACAGGAGGCGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PSLQVTPCWDRKDSI*RVRCTHQRSQEAGN
Trigger: GTTTCCCGCCTCCTGTGAACGCTGGTGTGTGCACCGCACTCTGCATATGGAATCTTTCCTGTCCCAGCACGGGGTGACTTGCAGAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS CCA 90 bp ACTTTCTCTCGGGAGCGCAGGACCCCCATCTTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGGTTTCCATTGGGCTGGCGGATGACA +
Preference number: 5 (lower is better)
Translates to: TFSRERRTPIFPKRT*KGEHWRFPLGWRMT
Trigger: TGTCATCCGCCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAAGATGGGGGTCCTGCGCTCCCGAGAGAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS CCA 90 bp CTCCCGTTTATTCACCTGATGGTTTGGCGGACTCGTGAAGCCACGTaGTTGCAAATACGAGCGGCGCCGCGCGTGGCCGCCTTTGTATTG +
Preference number: 5 (lower is better)
Translates to: LPFIHLMVWRTREAT*LQIRAAPRVAAFVL
Trigger: CAATACAAAGGCGGCCACGCGCGGCGCCGCTCGTATTTGCAACCACGTGGCTTCACGAGTCCGCCAAACCATCAGGTGAATAAACGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CCA 90 bp CAGGCCCTTCAGGGACGTGGCACCTCTCAGTGGCCGTCCAGTCTCTaGAGCCTCTTCTTTTCCAGCTCTGACTTATACTCCAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QALQGRGTSQWPSSL*SLFFSSSDLYSRAE
Trigger: CTCAGCCCTGGAGTATAAGTCAGAGCTGGAAAAGAAGAGGCTCCAGAGACTGGACGGCCACTGAGAGGTGCCACGTCCCTGAAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CCA 90 bp GCCATCAACCCTCCTCAGGCCCTTCAGGGACGTGGCACCTCTCAGTaGCCGTCCAGTCTCTGGAGCCTCTTCTTTTCCAGCTCTGACTTA +
Preference number: 5 (lower is better)
Translates to: AINPPQALQGRGTSQ*PSSLWSLFFSSSDL
Trigger: TAAGTCAGAGCTGGAAAAGAAGAGGCTCCAGAGACTGGACGGCCACTGAGAGGTGCCACGTCCCTGAAGGGCCTGAGGAGGGTTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CCA 90 bp TTCATGGGGTCATGCCATCAACCCTCCTCAGGCCCTTCAGGGACGTaGCACCTCTCAGTGGCCGTCCAGTCTCTGGAGCCTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: FMGSCHQPSSGPSGT*HLSVAVQSLEPLLF
Trigger: GAAAAGAAGAGGCTCCAGAGACTGGACGGCCACTGAGAGGTGCCACGTCCCTGAAGGGCCTGAGGAGGGTTGATGGCATGACCCCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGCTGGGAGCGATCACTaGGGCTGGCGTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNAGSDH*GWRAGV
Trigger: GACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACTTACTACAGAGCTGCTaGACGGCGTCTCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDLLQSC*TASRWE
Trigger: CTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAA...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGGGCTCCGTTGTCGCTaGCATGTTTTGCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQGLRCR*HVLRVR
Trigger: CCGGACTCGCAAAACATGCAAGCGACAACGGAGCCC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGGGCTCCGTTGTCGCTaGCATGTTTTGCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHGLRCR*HVLRVR
Trigger: CCGGACTCGCAAAACATGCAAGCGACAACGGAGCCC...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGGCTCCGTTGTCGCTaGCATGTTTTGCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGLRCR*HVLRVR
Trigger: CCGGACTCGCAAAACATGCAAGCGACAACGGAGCCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGCTGACCGGGCTCCGTaGTCGCTTGCATGTTTTGCG +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNADRAP*SLACFA
Trigger: CGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCGACTGCGGGGACTGGTaGGCTGACCGGGCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTDCGDW*ADRAPL
Trigger: CAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTC...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCTGGAAGGCCTGCATaGCCAGGAGGAGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQESGRPA*PGGGVL
Trigger: CAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGTCTGGAAGGCCTGCATaGCCAGGAGGAGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVSGRPA*PGGGVL
Trigger: CAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGA...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACCGGTGCTATGGGCCTaGCCAGCCAAGCACTGCTCT +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQPVLWA*PAKHCS
Trigger: AGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGCTGAGCTGCGGCGGTaGCTCTCCGGTGCTATGGGC +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNAELRR*LSGAMG
Trigger: GCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGACAGCGGCACGTGCCTaGGTACTGCGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWTAARA*VLRGDT
Trigger: AGTGTCACCACGCAGTACCAAGGCACGTGCCGCTGT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCACAGCGGCACGTGCCTaGGTACTGCGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCTAARA*VLRGDT
Trigger: AGTGTCACCACGCAGTACCAAGGCACGTGCCGCTGT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 90 bp CTGCAAGTCCCTCCCCAACAGCAAACAGGCCACCACCATAAATGCTaGCCGTTCAGGCCACAGCAACCCTTCTCCAAAGGTCTCGTGCAC +
Preference number: 5 (lower is better)
Translates to: LQVPPQQQTGHHHKC*PFRPQQPFSKGLVH
Trigger: GTGCACGAGACCTTTGGAGAAGGGTTGCTGTGGCCTGAACGGGCAGCATTTATGGTGGTGGCCTGTTTGCTGTTGGGGAGGGACTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS GCA 90 bp CTGCTGCAAGTCCCTCCCCAACAGCAAACAGGCCACCACCATAAATaGTGCCCGTTCAGGCCACAGCAACCCTTCTCCAAAGGTCTCGTG +
Preference number: 5 (lower is better)
Translates to: LLQVPPQQQTGHHHK*CPFRPQQPFSKGLV
Trigger: CACGAGACCTTTGGAGAAGGGTTGCTGTGGCCTGAACGGGCAGCATTTATGGTGGTGGCCTGTTTGCTGTTGGGGAGGGACTTGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS GCA 90 bp TCTGGCTTGATGGCAGCCCTAGGAAGGACCAGGCCGGTGGCCATCTaGCACTGGAGCACCTTGGCCTTCCAAGAGGACATATCAACTATG +
Preference number: 5 (lower is better)
Translates to: SGLMAALGRTRPVAI*HWSTLAFQEDISTM
Trigger: CATAGTTGATATGTCCTCTTGGAAGGCCAAGGTGCTCCAGTGGCAGATGGCCACCGGCCTGGTCCTTCCTAGGGCTGCCATCAAGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CCA 90 bp TCGGGAACCGGAAGGACTTTCCGAAGGATGGAACAGGGAAGACTGTaGAGGGCAAGAACTAGACAGACCTCCCTCGGCCGCAACTGCAAG +
Preference number: 5 (lower is better)
Translates to: SGTGRTFRRMEQGRL*RARTRQTSLGRNCK
Trigger: CTTGCAGTTGCGGCCGAGGGAGGTCTGTCTAGTTCTTGCCCTCCACAGTCTTCCCTGTTCCATCCTTCGGAAAGTCCTTCCGGTTCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000449576.6
ENST00000674199.1
CDS CCA 90 bp GCCTTCGCTAGCAATTCTAGAGAACTCCACAGGACAGCTAGCACATaGAACGGCTCTGGCTTGATGGCAGCCCTAGGAAGGACCAGGCCG +
Preference number: 5 (lower is better)
Translates to: AFASNSRELHRTAST*NGSGLMAALGRTRP
Trigger: CGGCCTGGTCCTTCCTAGGGCTGCCATCAAGCCAGAGCCGTTCCATGTGCTAGCTGTCCTGTGGAGTTCTCTAGAATTGCTAGCGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACGTGGAAAGGGGAGCATaGGAGGTTTCCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDVERGA*EVSIGL
Trigger: CAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCAC...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTTACTACAGAGCTGCTaGACGGCGTCTCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLLQSC*TASRWE
Trigger: CTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTTACTACAGAGCTGCTaGACGGCGTCTCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALLQSC*TASRWE
Trigger: CTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGCTGACCGGGCTCCGTaGTCGCTTGCATGTTTTGCG +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQADRAP*SLACFA
Trigger: CGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCTGGCAAGAGGCTGCTaGGGACATTTTACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDLARGC*GHFTLR
Trigger: CCTCAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGACAGATCTGTTTGCCTTaGTGTGTCCACATGAACCAT +
Preference number: 5 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGQICLP*CVHMNH
Trigger: ATGGTTCATGTGGACACACAAAGGCAAACAGATCTG...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAATGGCTGGCCCCGGTCTaGCCCTTCATCTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: HLAKASNANGAHQLQRRQWLAPV*PFISLP
Trigger: GGGAAGAGAGATGAAGGGCAAGACCGGGGCCAGCCA...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTCTCCCTCTCCAGCTaGCTTTCATCCATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLSLSS*LSSMPC
Trigger: GCAGGGCATGGATGAAAGCAAGCTGGAGAGGGAGAG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCCTCTCCCTCTCCAGCTaGCTTTCATCCATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCLSLSS*LSSMPC
Trigger: GCAGGGCATGGATGAAAGCAAGCTGGAGAGGGAGAG...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS GCA 90 bp AGACTGTGGAGGGCAAGAACTAGACAGACCTCCCTCGGCCGCAACTaGAAGATGAGGGGCAGTCCTTTTGCAATCTACCAGGCTACTGGG +
Preference number: 5 (lower is better)
Translates to: RLWRARTRQTSLGRN*KMRGSPFAIYQATG
Trigger: CCCAGTAGCCTGGTAGATTGCAAAAGGACTGCCCCTCATCTTGCAGTTGCGGCCGAGGGAGGTCTGTCTAGTTCTTGCCCTCCACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000449576.6
ENST00000674199.1
CDS GCA 90 bp CCAGTGATGCTCTGGCACGCGGCCACCCTCAGAGCCGCAGACGGCTaGATCTCAGCACAGATGTTTATTAAAGCACCACGACAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: PVMLWHAATLRAADG*ISAQMFIKAPRQGK
Trigger: CTTTCCTTGTCGTGGTGCTTTAATAAACATCTGTGCTGAGATGCAGCCGTCTGCGGCTCTGAGGGTGGCCGCGTGCCAGAGCATCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475286.1
CDS CCA 90 bp CGCAGGACCCCCATCTTCCCAAAGCGGACGTGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGGCGGATGACAATGATGTCAATGCAC +
Preference number: 5 (lower is better)
Translates to: RRTPIFPKRTWKGEH*RFPLGWRMTMMSMH
Trigger: GTGCATTGACATCATTGTCATCCGCCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAAGATGGGGGTCCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGTGGAAAGGGGAGCATaGGAGGTTTCCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCVERGA*EVSIGL
Trigger: CAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCAC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATTACTACAGAGCTGCTaGACGGCGTCTCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQLLQSC*TASRWE
Trigger: CTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 90 bp AGACTTAGCAGCCTGCGGCAGCTCTCCCCACAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCTTTCCGTGGACTTGCTGACCAATTC +
Preference number: 5 (lower is better)
Translates to: RLSSLRQLSPQPKHF*VLLPCPFRGLADQF
Trigger: GAATTGGTCAGCAAGTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTGTGGGGAGAGCTGCCGCAGGCTGCTAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGTGGAAAGGGGAGCATaGGAGGTTTCCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQEVERGA*EVSIGL
Trigger: CAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCAC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGAAGGATCTCCGTTTTaGGGAAAATACAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQEGSPF*GKYRAA
Trigger: GGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTTC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTGAAGGATCTCCGTTTTaGGGAAAATACAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAEGSPF*GKYRAA
Trigger: GGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTTC...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGAAGGATCTCCGTTTTaGGGAAAATACAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALEGSPF*GKYRAA
Trigger: GGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTTC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTGTCGCTTGCATGTTTaGCGAGTCCGGAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQACRLHV*RVRKDL
Trigger: GAGATCCTTCCGGACTCGCAAAACATGCAAGCGACA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACTGTCGCTTGCATGTTTaGCGAGTCCGGAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNCRLHV*RVRKDL
Trigger: GAGATCCTTCCGGACTCGCAAAACATGCAAGCGACA...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGACTGCGGGGACTGGTaGGCTGACCGGGCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIDCGDW*ADRAPL
Trigger: CAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCTGAAAACCACGTCGTaGGGGCCATTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDLKTTS*GPFFNF
Trigger: GAAGTTGAAGAATGGCCCCAACGACGTGGTTTTCAG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTCAGGCCAATGATGACGCGCCAGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAAGCTCTCCTTTAGGGTaGACGGTAAATATTCTATTC +
Preference number: 5 (lower is better)
Translates to: VRPMMTRQAPRWSCALRGSSPLG*TVNILF
Trigger: GAATAGAATATTTACCGTCAACCCTAAAGGAGAGCT...TCCCCGGAGTGCACAGCTCCACCTGGGAGCCTGGCGCGTCATCATTGGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCTGGCAAGAGGCTGCTaGGGACATTTTACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSLARGC*GHFTLR
Trigger: CCTCAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCGATGGCAGATCTGTTaGCCTTTGTGTGTCCACATG +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDRWQIC*PLCVHM
Trigger: CATGTGGACACACAAAGGCAAACAGATCTGCCATCG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACCATCAGAAGGCACATaGTCAGGACCTGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQPSEGT*SGPGSA
Trigger: AGCTGAGCCAGGTCCTGACAATGTGCCTTCTGATGG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGTTAAGCAGGTGGCCTaGAATTCTGGCAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVVKQVA*NSGSSR
Trigger: GCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAAC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS GCA 90 bp GCCTGCGGCAGCTCTCCCCACAGCCAAAGCATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGACTTGCTGACCAATTCTGAATCACTT +
Preference number: 5 (lower is better)
Translates to: ACGSSPHSQSISGFF*PVLSVDLLTNSESL
Trigger: AAGTGATTCAGAATTGGTCAGCAAGTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTGTGGGGAGAGCTGCCGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTGAGAATCCGTCTTGTTaGCTGTCTGGACTACACTGG +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAENPSC*LSGLHW
Trigger: CCAGTGTAGTCCAGACAGCAAACAAGACGGATTCTC...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGAGAATCCGTCTTGTTaGCTGTCTGGACTACACTGG +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCENPSC*LSGLHW
Trigger: CCAGTGTAGTCCAGACAGCAAACAAGACGGATTCTC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGAAGGATCTCCGTTTTaGGGAAAATACAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSEGSPF*GKYRAA
Trigger: GGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTTC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTGTCGCTTGCATGTTTaGCGAGTCCGGAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQECRLHV*RVRKDL
Trigger: GAGATCCTTCCGGACTCGCAAAACATGCAAGCGACA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQIPQWP*AKVSGR
Trigger: CCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHIPQWP*AKVSGR
Trigger: CCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCIPQWP*AKVSGR
Trigger: CCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWIPQWP*AKVSGR
Trigger: CCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCTGAAAACCACGTCGTaGGGGCCATTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQLKTTS*GPFFNF
Trigger: GAAGTTGAAGAATGGCCCCAACGACGTGGTTTTCAG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGAGTATCTGCTGGCAAGAGGCTGCTaGGGACATTTTACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PDGSNPSQGWAKCGQEYLLARGC*GHFTLR
Trigger: CCTCAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAG...CAGATACTCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGTGCTCCCTTCCTATCTaGCTTAGAAATGTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWCSLPI*LRNVSP
Trigger: GGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGCA...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTGCTCCCTTCCTATCTaGCTTAGAAATGTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALCSLPI*LRNVSP
Trigger: GGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGCA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAATGTGCCCCCTACTTaGCCAAAAACCGTGCACATC +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHNVPPT*PKTVHI
Trigger: GATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGAATGTGCCCCCTACTTaGCCAAAAACCGTGCACATC +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALNVPPT*PKTVHI
Trigger: GATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATT...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGTTAATATGCCAGCCTaGCCAGGGCTCACATTGAAC +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQVNMPA*PGLTLN
Trigger: GTTCAATGTGAGCCCTGGCAAGGCTGGCATATTAAC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCAGGGTCTCTCATTATaGGAATCCATGACCAAGCCG +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHQGLSL*ESMTKP
Trigger: CGGCTTGGTCATGGATTCCAATAATGAGAGACCCTG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS TCA 90 bp CGTTTTTGGGAAAATACAGGGCCGCCACTTCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGCCGTCAGCACCAAGATGTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: RFWENTGPPLQDPCL*GHPSRRRQHQDVGF
Trigger: GAAGCCGACATCTTGGTGCTGACGGCGTCTACTTGGATGACCTCACAGACATGGATCCTGAAGTGGCGGCCCTGTATTTTCCCAAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 90 bp AGGCCACAGCAACCCTTCTCCAAAGGTCTCGTGCACAAACACAGATaGGCTTTCTGCCGACCGTCACTGAGGGAATTCAGACAGACCAAA +
Preference number: 5 (lower is better)
Translates to: RPQQPFSKGLVHKHR*AFCRPSLREFRQTK
Trigger: TTTGGTCTGTCTGAATTCCCTCAGTGACGGTCGGCAGAAAGCGCATCTGTGTTTGTGCACGAGACCTTTGGAGAAGGGTTGCTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS GCA 90 bp TTCATAAAAGCCACGAGCCACAAAACCCATAGAGGCACTCAGGCGTaGAACTCACGCATAAGGAGCCCAGCCCTACGAGAAAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FIKATSHKTHRGTQA*NSRIRSPALRESLL
Trigger: CAGCAGACTTTCTCGTAGGGCTGGGCTCCTTATGCGTGAGTTGCACGCCTGAGTGCCTCTATGGGTTTTGTGGCTCGTGGCTTTTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCGCGCGTGGCCGCCTTaGTATTGCAAACACCCAGCC +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKRAWPP*YCKHPA
Trigger: GGCTGGGTGTTTGCAATACAAAGGCGGCCACGCGCG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256720.6
CDS-3UTR CAA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAGAGAATCCGTCTTGTTaGCTGTCTGGACTACACTGG +
Preference number: 5 (lower is better)
Translates to: MVQLSDALMGPILPKGGQENPSC*LSGLHW
Trigger: CCAGTGTAGTCCAGACAGCAAACAAGACGGATTCTC...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGAATCCGTCTTGTTaGCTGTCTGGACTACACTGG +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQENPSC*LSGLHW
Trigger: CCAGTGTAGTCCAGACAGCAAACAAGACGGATTCTC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGAAGGAGAATCCGTCTaGTTTGCTGTCTGGACTACA +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNEGESV*FAVWTT
Trigger: TGTAGTCCAGACAGCAAACAAGACGGATTCTCCTTC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGAAGGAGAATCCGTCTaGTTTGCTGTCTGGACTACA +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCEGESV*FAVWTT
Trigger: TGTAGTCCAGACAGCAAACAAGACGGATTCTCCTTC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTTCTGGAAGGCCTGCATaGCCAGGAGGAGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGISGRPA*PGGGVL
Trigger: CAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGA...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGGCTTACTTTCCTCCTaGATTGTGGTGTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALGLLSS*IVVFLP
Trigger: GGGAAGAAACACCACAATCAAGGAGGAAAGTAAGCC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGCTTACTTTCCTCCTaGATTGTGGTGTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGLLSS*IVVFLP
Trigger: GGGAAGAAACACCACAATCAAGGAGGAAAGTAAGCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCCTGCGTTTGATGGCTaGGCAGCTGCGCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKPAFDG*AAARSS
Trigger: TGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAGG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCCCTGCGTTTGATGGCTaGGCAGCTGCGCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SQSLTYEEMLVFACSCTSPAFDG*AAARSS
Trigger: TGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAGG...GCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTGCGTTTGATGGCTaGGCAGCTGCGCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIPAFDG*AAARSS
Trigger: TGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAGG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGCTGAAAACCACGTCGTaGGGGCCATTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVLKTTS*GPFFNF
Trigger: GAAGTTGAAGAATGGCCCCAACGACGTGGTTTTCAG...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTGAAAACCACGTCGTaGGGGCCATTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQELKTTS*GPFFNF
Trigger: GAAGTTGAAGAATGGCCCCAACGACGTGGTTTTCAG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCACAGCGGCACGTGCCTaGGTACTGCGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: PTPSLESAPFLSCLEMSATAARA*VLRGDT
Trigger: AGTGTCACCACGCAGTACCAAGGCACGTGCCGCTGT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATGCTCCCTTCCTATCTaGCTTAGAAATGTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQCSLPI*LRNVSP
Trigger: GGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGCA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGAATGTGCCCCCTACTTaGCCAAAAACCGTGCACATC +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQENVPPT*PKTVHI
Trigger: GATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGTCCACATGAACCATTaGGCAAAGGCATCCAATGCT +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHVHMNH*AKASNA
Trigger: AGCATTGGATGCCTTTGCCAAATGGTTCATGTGGAC...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGGCTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACCAGATCTGTTTGCCTTaGTGTGTCCACATGAACCAT +
Preference number: 5 (lower is better)
Translates to: RLPGGAVHSGETYPLMGDQICLP*CVHMNH
Trigger: ATGGTTCATGTGGACACACAAAGGCAAACAGATCTG...GTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCGATGGCAGATCTGTTaGCCTTTGTGTGTCCACATG +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSRWQIC*PLCVHM
Trigger: CATGTGGACACACAAAGGCAAACAGATCTGCCATCG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACAAACCGTCTGAACCTTaGCAGGCCCATGAGCTTATA +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNKPSEP*QAHELI
Trigger: TATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTTT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAAACCGTCTGAACCTTaGCAGGCCCATGAGCTTATA +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHKPSEP*QAHELI
Trigger: TATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTTT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGAAACCGTCTGAACCTTaGCAGGCCCATGAGCTTATA +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWKPSEP*QAHELI
Trigger: TATAAGCTCATGGGCCTGCAAAGGTTCAGACGGTTT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGTTAATATGCCAGCCTaGCCAGGGCTCACATTGAAC +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSVNMPA*PGLTLN
Trigger: GTTCAATGTGAGCCCTGGCAAGGCTGGCATATTAAC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGTTAATATGCCAGCCTaGCCAGGGCTCACATTGAAC +
Preference number: 5 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVVNMPA*PGLTLN
Trigger: GTTCAATGTGAGCCCTGGCAAGGCTGGCATATTAAC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCTGGCTGGCCCCGGTCTaGCCCTTCATCTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCWLAPV*PFISLP
Trigger: GGGAAGAGAGATGAAGGGCAAGACCGGGGCCAGCCA...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGTTAAGCAGGTGGCCTaGAATTCTGGCAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNVKQVA*NSGSSR
Trigger: GCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAAC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS TCA 90 bp ACTTTTTGGGAAAATACAGGGCCGCCACTTCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGCCGTCAGCACCAAGATGTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: TFWENTGPPLQDPCL*GHPSRRRQHQDVGF
Trigger: GAAGCCGACATCTTGGTGCTGACGGCGTCTACTTGGATGACCTCACAGACATGGATCCTGAAGTGGCGGCCCTGTATTTTCCCAAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396098.5
ENST00000460096.1
CDS TCA 90 bp CTCTGTACTCACTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTaGTGGGTCCAATCCTTCCCAAGGGTGGGCAAAATGTGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: LCTHWLTLWYSLAMP*WVQSFPRVGKMWPR
Trigger: TCTTGGCCACATTTTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGTGAGTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS TCA 90 bp CAGAATCCAACAGGCTCAAATTCAAGTCCAGCTCAGCCACGTGGCTaGGTGCTGTCTGAACCTCAGCGTCCTCAGCTGTTAAACAGAGGT +
Preference number: 5 (lower is better)
Translates to: QNPTGSNSSPAQPRG*VLSEPQRPQLLNRG
Trigger: ACCTCTGTTTAACAGCTGAGGACGCTGAGGTTCAGACAGCACTCAGCCACGTGGCTGAGCTGGACTTGAATTTGAGCCTGTTGGATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495907.5
CDS-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCGCTGGGAGCGATCACTaGGGCTGGCGTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSAGSDH*GWRAGV
Trigger: GACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGC...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGTCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQSDVFM*SSLFRL
Trigger: CAGCCTGAAGAGAGATGACAACATGAACACATCTGA...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGAGAATCCGTCTTGTTaGCTGTCTGGACTACACTGG +
Preference number: 5 (lower is better)
Translates to: HLAKASNANGAHQLQRRQENPSC*LSGLHW
Trigger: CCAGTGTAGTCCAGACAGCAAACAAGACGGATTCTC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGGAAGGAGAATCCGTCTaGTTTGCTGTCTGGACTACA +
Preference number: 5 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVEGESV*FAVWTT
Trigger: TGTAGTCCAGACAGCAAACAAGACGGATTCTCCTTC...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGAAGGAGAATCCGTCTaGTTTGCTGTCTGGACTACA +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQEEGESV*FAVWTT
Trigger: TGTAGTCCAGACAGCAAACAAGACGGATTCTCCTTC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGAGAATCCGTCTaGTTTGCTGTCTGGACTACA +
Preference number: 5 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSEGESV*FAVWTT
Trigger: TGTAGTCCAGACAGCAAACAAGACGGATTCTCCTTC...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCGGGCTCCGTTGTCGCTaGCATGTTTTGCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: NVVDYFTESHIRRDVGLCGLRCR*HVLRVR
Trigger: CCGGACTCGCAAAACATGCAAGCGACAACGGAGCCC...GCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGGGCTCCGTTGTCGCTaGCATGTTTTGCGAGTCCGG +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIGLRCR*HVLRVR
Trigger: CCGGACTCGCAAAACATGCAAGCGACAACGGAGCCC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTGCTGACCGGGCTCCGTaGTCGCTTGCATGTTTTGCG +
Preference number: 5 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAADRAP*SLACFA
Trigger: CGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGC...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACATCTTTACCACGAGATaGGGGTCATCGATAATAGCG +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNIFTTR*GSSIIA
Trigger: CGCTATTATCGATGACCCCAATCTCGTGGTAAAGAT...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTCCCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACGGAGGGGTGCTGCTGTaGTCCAGTTATAATATTTAC +
Preference number: 5 (lower is better)
Translates to: LPGGAVHSGETYPLMGDNGGVLL*SSYNIY
Trigger: GTAAATATTATAACTGGACAACAGCAGCACCCCTCC...GTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTCTGGAAGGCCTGCATaGCCAGGAGGAGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLSGRPA*PGGGVL
Trigger: CAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGCATCTTCCTCCCTTTTaGGGCATTTTATCCCTCATG +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQHLPPF*GILSLM
Trigger: CATGAGGGATAAAATGCCCAAAAAGGGAGGAAGATG...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGGCTTACTTTCCTCCTaGATTGTGGTGTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSGLLSS*IVVFLP
Trigger: GGGAAGAAACACCACAATCAAGGAGGAAAGTAAGCC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGGCTTACTTTCCTCCTaGATTGTGGTGTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQGLLSS*IVVFLP
Trigger: GGGAAGAAACACCACAATCAAGGAGGAAAGTAAGCC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCCGGTGCTATGGGCCTaGCCAGCCAAGCACTGCTCT +
Preference number: 5 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLPVLWA*PAKHCS
Trigger: AGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGACAGCGGCACGTGCCTaGGTACTGCGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKTAARA*VLRGDT
Trigger: AGTGTCACCACGCAGTACCAAGGCACGTGCCGCTGT...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGAAGAGATGTTGGTCTTaGCATGTTCCTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQKRCWS*HVPVPA
Trigger: AGCTGGTACAGGAACATGCAAAGACCAACATCTCTT...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGATAAATATTCCAGCCTaGAGCCACAAAAACTGGGGG +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWINIPA*SHKNWG
Trigger: CCCCCAGTTTTTGTGGCTCAAGGCTGGAATATTTAT...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGAACCAACCAGTTTCTTaGGAGAGCTCCCAACAGAAG +
Preference number: 5 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVNQPVS*ESSQQK
Trigger: CTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGTT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCAACCAACCAGTTTCTTaGGAGAGCTCCCAACAGAAG +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSNQPVS*ESSQQK
Trigger: CTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGTT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACCAGATCTGTTTGCCTTaGTGTGTCCACATGAACCAT +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHQICLP*CVHMNH
Trigger: ATGGTTCATGTGGACACACAAAGGCAAACAGATCTG...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS GCA 90 bp TGTCAGGACCTGGCTCAGCTTCCATTAACTTCAGATAAAGGCCCCTaGTCATGCGAACCTGGGTCTCCTGGTGGATTCTCCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CQDLAQLPLTSDKGP*SCEPGSPGGFSFFF
Trigger: GAAGAAAAAGGAGAATCCACCAGGAGACCCAGGTTCGCATGAGCAGGGGCCTTTATCTGAAGTTAATGGAAGCTGAGCCAGGTCCTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396098.5
ENST00000396099.5
ENST00000464517.5
ENST00000480315.1
ENST00000495907.5
CDS GCA 90 bp TCTCACATACAGACACTCGCAAACGAAAGGGAAAAAGAACTGAGCTaGTCCCGCTGTGTGGCCCCAGCCTCTGAAGACATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: SHIQTLANEREKELS*SRCVAPASEDISDD
Trigger: GTCATCTGAAATGTCTTCAGAGGCTGGGGCCACACAGCGGGAGCAGCTCAGTTCTTTTTCCCTTTCGTTTGCGAGTGTCTGTATGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487576.1
CDS CCA 90 bp CACGTTCCACGAGCACTCGCCCTACTTCATGGCAGAGCTGGCTCATaGAAACTCAGCACTAGGGCCTATCTTCATTTCTCTGATGTAAGT +
Preference number: 5 (lower is better)
Translates to: HVPRALALLHGRAGS*KLSTRAYLHFSDVS
Trigger: ACTTACATCAGAGAAATGAAGATAGGCCCTAGTGCTGAGTTTCCATGAGCCAGCTCTGCCATGAAGTAGGGCGAGTGCTCGTGGAACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS-3UTR CAA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGGTGGAAAGGGGAGCATaGGAGGTTTCCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQVERGA*EVSIGL
Trigger: CAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCAC...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGTCCACAGATTCCCCATaGATTTCTATGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALSTDSP*ISMSTT
Trigger: AGTGGTTGACATAGAAATCAATGGGGAATCTGTGGA...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAATCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQSDVFM*SSLFRL
Trigger: CAGCCTGAAGAGAGATGACAACATGAACACATCTGA...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCATCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSSDVFM*SSLFRL
Trigger: CAGCCTGAAGAGAGATGACAACATGAACACATCTGA...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGACTCTTTCATCTaGTGTGGAGAAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALDSFI*CGEEDL
Trigger: TAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAGAAGGTGATCTTTACCACGAGATaGGGGTCATCGATAATAGCG +
Preference number: 5 (lower is better)
Translates to: SDPGHMSLHSPPHCVQKVIFTTR*GSSIIA
Trigger: CGCTATTATCGATGACCCCAATCTCGTGGTAAAGAT...CACCTTCTGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAATCTTTACCACGAGATaGGGGTCATCGATAATAGCG +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQIFTTR*GSSIIA
Trigger: CGCTATTATCGATGACCCCAATCTCGTGGTAAAGAT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGATCTTTACCACGAGATaGGGGTCATCGATAATAGCG +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQEIFTTR*GSSIIA
Trigger: CGCTATTATCGATGACCCCAATCTCGTGGTAAAGAT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCCCAAGGGTGGGCAAGGAGGGGTGCTGCTGTaGTCCAGTTATAATATTTAC +
Preference number: 5 (lower is better)
Translates to: MVQLSDALMGPILPKGGQGGVLL*SSYNIY
Trigger: GTAAATATTATAACTGGACAACAGCAGCACCCCTCC...TTGCCCACCCTTGGGAAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGGAGGGGTGCTGCTGTaGTCCAGTTATAATATTTAC +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQEGGVLL*SSYNIY
Trigger: GTAAATATTATAACTGGACAACAGCAGCACCCCTCC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCCATCTTCCTCCCTTTTaGGGCATTTTATCCCTCATG +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSHLPPF*GILSLM
Trigger: CATGAGGGATAAAATGCCCAAAAAGGGAGGAAGATG...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACATCTTCCTCCCTTTTaGGGCATTTTATCCCTCATG +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQHLPPF*GILSLM
Trigger: CATGAGGGATAAAATGCCCAAAAAGGGAGGAAGATG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGGCTTACTTTCCTCCTaGATTGTGGTGTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: HLAKASNANGAHQLQRRQGLLSS*IVVFLP
Trigger: GGGAAGAAACACCACAATCAAGGAGGAAAGTAAGCC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGGGGAAAAACAGGTTTTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAAAACCTGTTTTTCCC...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGGGGAAAAACAGGTTTTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAAAACCTGTTTTTCCC...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGACACTCCTACTTGCTaGTATGAATACACATCAGCT +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHDTPTC*YEYTSA
Trigger: AGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTC...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGACACTCCTACTTGCTaGTATGAATACACATCAGCT +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQDTPTC*YEYTSA
Trigger: AGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTC...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAAAGAGATGTTGGTCTTaGCATGTTCCTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQKRCWS*HVPVPA
Trigger: AGCTGGTACAGGAACATGCAAAGACCAACATCTCTT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCAAAGAGATGTTGGTCTTaGCATGTTCCTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSKRCWS*HVPVPA
Trigger: AGCTGGTACAGGAACATGCAAAGACCAACATCTCTT...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGATAAATATTCCAGCCTaGAGCCACAAAAACTGGGGG +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQEINIPA*SHKNWG
Trigger: CCCCCAGTTTTTGTGGCTCAAGGCTGGAATATTTAT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAGTCCACATGAACCATTaGGCAAAGGCATCCAATGCT +
Preference number: 5 (lower is better)
Translates to: HLAKASNANGAHQLQRRQVHMNH*AKASNA
Trigger: AGCATTGGATGCCTTTGCCAAATGGTTCATGTGGAC...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS TCA 90 bp CTCATGGATGAGGTTTCTAGTTGTCTTCTGTTAAGCAGGTGGCCTTaGATTCTGGCAGCTCACGCTTCAGAGTTACCTGGGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LMDEVSSCLLLSRWP*ILAAHASELPGSPG
Trigger: ACCAGGAGACCCAGGTAACTCTGAAGCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAACAGAAGACAACTAGAAACCTCATCCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGGTGGAAAGGGGAGCATaGGAGGTTTCCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKVERGA*EVSIGL
Trigger: CAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCAC...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGTCCACAGATTCCCCATaGATTTCTATGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQESTDSP*ISMSTT
Trigger: AGTGGTTGACATAGAAATCAATGGGGAATCTGTGGA...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAATCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HLAKASNANGAHQLQRRQSDVFM*SSLFRL
Trigger: CAGCCTGAAGAGAGATGACAACATGAACACATCTGA...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAACTGGACTCTTTCATCTaGTGTGGAGAAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQLDSFI*CGEEDL
Trigger: TAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAG...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTGGACTCTTTCATCTaGTGTGGAGAAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQELDSFI*CGEEDL
Trigger: TAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGTGTCGCTTGCATGTTTaGCGAGTCCGGAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQCRLHV*RVRKDL
Trigger: GAGATCCTTCCGGACTCGCAAAACATGCAAGCGACA...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAGCTGACCGGGCTCCGTaGTCGCTTGCATGTTTTGCG +
Preference number: 5 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPADRAP*SLACFA
Trigger: CGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGC...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCGGGAAAAACAGGTTTTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAAAACCTGTTTTTCCC...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGGACACTCCTACTTGCTaGTATGAATACACATCAGCT +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQEDTPTC*YEYTSA
Trigger: AGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTC...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACAGCTCTCCTTTAGGGTaGACGGTAAATATTCTATTC +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHSSPLG*TVNILF
Trigger: GAATAGAATATTTACCGTCAACCCTAAAGGAGAGCT...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTAGCTCTCCTTTAGGGTaGACGGTAAATATTCTATTC +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQASSPLG*TVNILF
Trigger: GAATAGAATATTTACCGTCAACCCTAAAGGAGAGCT...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GACCCGGTGGCGTCCAGATTTCTATCAGAGACCTCAGATCCAGGTCACATGAGCACATACGAAGAGATGTaGGTCTTTGCATGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: DPVASRFLSETSDPGHMSTYEEM*VFACSC
Trigger: ACAGGAACATGCAAAGACCAACATCTCTTCGTATGT...GCTCATGTGACCTGGATCTGAGGTCTCTGATAGAAATCTGGACGCCACCGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGACATACGAAGAGATGTaGGTCTTTGCATGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQETYEEM*VFACSC
Trigger: ACAGGAACATGCAAAGACCAACATCTCTTCGTATGT...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAACATACGAAGAGATGTaGGTCTTTGCATGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQTYEEM*VFACSC
Trigger: ACAGGAACATGCAAAGACCAACATCTCTTCGTATGT...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCTGGCAAGAGGCTGCTaGGGACATTTTACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGILARGC*GHFTLR
Trigger: CCTCAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CATTTGGCAAAGGCATCCAATGCTAACGGGGCCCACCAACTACAACGGAGGCAAATAAATATTCCAGCCTaGAGCCACAAAAACTGGGGG +
Preference number: 5 (lower is better)
Translates to: HLAKASNANGAHQLQRRQINIPA*SHKNWG
Trigger: CCCCCAGTTTTTGTGGCTCAAGGCTGGAATATTTAT...TTGCCTCCGTTGTAGTTGGTGGGCCCCGTTAGCATTGGATGCCTTTGCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATAACCAACCAGTTTCTTaGGAGAGCTCCCAACAGAAG +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNNQPVS*ESSQQK
Trigger: CTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGTT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGAGCTTTCACTTTTCAAATaGTTCTGTCCACGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: GETYPLMGDNQALHCWQELSLFK*FCPRAS
Trigger: ACTGGCTCGTGGACAGAACAATTTGAAAAGTGAAAG...CTCTTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTTTCCATAGGGCAACTTaGAAATGTGTGGTCCAAATA +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQAFHRAT*KCVVQI
Trigger: TATTTGGACCACACATTTCAAAGTTGCCCTATGGAA...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAGGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGTTCCATAGGGCAACTTaGAAATGTGTGGTCCAAATA +
Preference number: 5 (lower is better)
Translates to: PGGAVHSGETYPLMGDNQFHRAT*KCVVQI
Trigger: TATTTGGACCACACATTTCAAAGTTGCCCTATGGAA...CTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACGCCAGGTATACATATTaGTCTTCATCACATGTGACA +
Preference number: 5 (lower is better)
Translates to: AVHSGETYPLMGDNQALHARYTY*SSSHVT
Trigger: TGTCACATGTGATGAAGACAAATATGTATACCTGGC...GTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCGCCAGGTATACATATTaGTCTTCATCACATGTGACA +
Preference number: 5 (lower is better)
Translates to: VHSGETYPLMGDNQALHCARYTY*SSSHVT
Trigger: TGTCACATGTGATGAAGACAAATATGTATACCTGGC...GCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTGTTAAGCAGGTGGCCTaGAATTCTGGCAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAVKQVA*NSGSSR
Trigger: GCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAAC...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS TCA 90 bp ATGAACTGGGAAAAGACATTCGCAGCACTCCTGACAAAGGCTAAGTaGTCACCATCCTGTGCTGAGGGCTTGTTTTTGCCAACTGCACCA +
Preference number: 5 (lower is better)
Translates to: MNWEKTFAALLTKAK*SPSCAEGLFLPTAP
Trigger: TGGTGCAGTTGGCAAAAACAAGCCCTCAGCACAGGATGGTGATCACTTAGCCTTTGTCAGGAGTGCTGCGAATGTCTTTTCCCAGTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS TCA 90 bp AGAAAGCCCCAAAACAGAACCACACGTTCACAGATACTTGCTTTATaGCCACAATGGCATCTCGGAGCAGCAAGGGCAGGGCAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: RKPQNRTTRSQILAL*PQWHLGAARAGQSF
Trigger: AAAAGACTGCCCTGCCCTTGCTGCTCCGAGATGCCATTGTGGTCATAAAGCAAGTATCTGTGAACGTGTGGTTCTGTTTTGGGGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCATTGGAGGTTTCCATaGGGCTGGCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIHWRFP*GWRMTM
Trigger: CATTGTCATCCGCCAGCCCAATGGAAACCTCCAATG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCCATTGGAGGTTTCCATaGGGCTGGCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIHWRFP*GWRMTM
Trigger: CATTGTCATCCGCCAGCCCAATGGAAACCTCCAATG...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCTCAGGAATATCATCTaGGAATGGAGGTATATCATT +
Preference number: 5 (lower is better)
Translates to: GAVHSGETYPLMGDNQALLRNII*EWRYII
Trigger: AATGATATACCTCCATTCCAAGATGATATTCCTGAG...CAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCTCAGGAATATCATCTaGGAATGGAGGTATATCATT +
Preference number: 5 (lower is better)
Translates to: HSGETYPLMGDNQALHCWLRNII*EWRYII
Trigger: AATGATATACCTCCATTCCAAGATGATATTCCTGAG...CCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GGTGGAGCTGTGCACTCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTCAGGAATATCATCTaGGAATGGAGGTATATCATT +
Preference number: 5 (lower is better)
Translates to: GGAVHSGETYPLMGDNQALRNII*EWRYII
Trigger: AATGATATACCTCCATTCCAAGATGATATTCCTGAG...AGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGAGTGCACAGCTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCGGAGGGGTGCTGCTGTaGTCCAGTTATAATATTTAC +
Preference number: 5 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTGGVLL*SSYNIY
Trigger: GTAAATATTATAACTGGACAACAGCAGCACCCCTCC...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATGGAGGTGGCCTGCGTTaGATGGCTTGGCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYGGGLR*MAWQLR
Trigger: GCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTCC...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCAAGAGATGTTGGTCTTaGCATGTTCCTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTKRCWS*HVPVPA
Trigger: AGCTGGTACAGGAACATGCAAAGACCAACATCTCTT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTCTGGCAAGAGGCTGCTaGGGACATTTTACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLLARGC*GHFTLR
Trigger: CCTCAGCGTAAAATGTCCCAAGCAGCCTCTTGCCAG...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCATAAATATTCCAGCCTaGAGCCACAAAAACTGGGGG +
Preference number: 5 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTINIPA*SHKNWG
Trigger: CCCCCAGTTTTTGTGGCTCAAGGCTGGAATATTTAT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TCCGGGGAGACCTATCCTTTAATGGGTGACAACCAGGCTCTGCACTGCTGGCAAGCCAGGTATACATATTaGTCTTCATCACATGTGACA +
Preference number: 5 (lower is better)
Translates to: SGETYPLMGDNQALHCWQARYTY*SSSHVT
Trigger: TGTCACATGTGATGAAGACAAATATGTATACCTGGC...TTGCCAGCAGTGCAGAGCCTGGTTGTCACCCATTAAAGGATAGGTCTCCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS GCA 90 bp CTTTGGCAAAGGTTTCTGGAAGGCCTGCATTGCCAGGAGGAGGGGTaGTGCTGTTGTCCAGTTATAATATTTACTCCCAATCTTTACCAC +
Preference number: 5 (lower is better)
Translates to: LWQRFLEGLHCQEEG*CCCPVIIFTPNLYH
Trigger: GTGGTAAAGATTGGGAGTAAATATTATAACTGGACAACAGCAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000464953.2
ENST00000674199.1
CDS-3UTR CAA 90 bp ACACTCCTACTTGCTTGTATGAATACACATCAGCTGGTCGGTTTCCAAAAGCAGCATTGGAGGTTTCCATaGGGCTGGCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: TLLLACMNTHQLVGFQKQHWRFP*GWRMTM
Trigger: CATTGTCATCCGCCAGCCCAATGGAAACCTCCAATG...CTGCTTTTGGAAACCGACCAGCTGATGTGTATTCATACAAGCAAGTAGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATTCCACAGATTCCCCATaGATTTCTATGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNSTDSP*ISMSTT
Trigger: AGTGGTTGACATAGAAATCAATGGGGAATCTGTGGA...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AGAGACCTCAGATCCAGGTCACATGAGCCTTCACAGCCCTCCCCACTGTGTTCACTCAGGAATATCATCTaGGAATGGAGGTATATCATT +
Preference number: 5 (lower is better)
Translates to: RDLRSRSHEPSQPSPLCSLRNII*EWRYII
Trigger: AATGATATACCTCCATTCCAAGATGATATTCCTGAG...TGAACACAGTGGGGAGGGCTGTGAAGGCTCATGTGACCTGGATCTGAGGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATCTGGACTCTTTCATCTaGTGTGGAGAAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNLDSFI*CGEEDL
Trigger: TAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAG...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGAGAATCCGTCTTGTTaGCTGTCTGGACTACACTGG +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIENPSC*LSGLHW
Trigger: CCAGTGTAGTCCAGACAGCAAACAAGACGGATTCTC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTGAAGGATCTCCGTTTTaGGGAAAATACAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLEGSPF*GKYRAA
Trigger: GGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTTC...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp TGTTCAGAAGGTGGTGGCACTAACATTGCTATAATGGAAATGTGCCCCCTACTTTGTCGCTTGCATGTTTaGCGAGTCCGGAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: CSEGGGTNIAIMEMCPLLCRLHV*RVRKDL
Trigger: GAGATCCTTCCGGACTCGCAAAACATGCAAGCGACA...AAGTAGGGGGCACATTTCCATTATAGCAATGTTAGTGCCACCACCTTCTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATTCTGGAAGGCCTGCATaGCCAGGAGGAGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYSGRPA*PGGGVL
Trigger: CAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGA...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPAIPQWP*AKVSGR
Trigger: CCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGAACAGCGGCACGTGCCTaGGTACTGCGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRTAARA*VLRGDT
Trigger: AGTGTCACCACGCAGTACCAAGGCACGTGCCGCTGT...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCGGGAAAAACAGGTTTTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAAAACCTGTTTTTCCC...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATGACACTCCTACTTGCTaGTATGAATACACATCAGCT +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNDTPTC*YEYTSA
Trigger: AGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTC...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCACATACGAAGAGATGTaGGTCTTTGCATGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTTYEEM*VFACSC
Trigger: ACAGGAACATGCAAAGACCAACATCTCTTCGTATGT...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATACATACGAAGAGATGTaGGTCTTTGCATGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNTYEEM*VFACSC
Trigger: ACAGGAACATGCAAAGACCAACATCTCTTCGTATGT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCGATGGCAGATCTGTTaGCCTTTGTGTGTCCACATG +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKRWQIC*PLCVHM
Trigger: CATGTGGACACACAAAGGCAAACAGATCTGCCATCG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS TCA 90 bp ATTGGGGTCATCGATAATAGCGGGGTTGTCCACAAACTGTTGATATaGCACAGCTTGCTCCAGGAATGCATCTGTGACAGCAATTGCAGA +
Preference number: 5 (lower is better)
Translates to: IGVIDNSGVVHKLLI*HSLLQECICDSNCR
Trigger: TCTGCAATTGCTGTCACAGATGCATTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAACCCCGCTATTATCGATGACCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS TCA 90 bp ACGAGATTGGGGTCATCGATAATAGCGGGGTTGTCCACAAACTGTTaGTATGACACAGCTTGCTCCAGGAATGCATCTGTGACAGCAATT +
Preference number: 5 (lower is better)
Translates to: TRLGSSIIAGLSTNC*YDTACSRNASVTAI
Trigger: AATTGCTGTCACAGATGCATTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAACCCCGCTATTATCGATGACCCCAATCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCGTGGAAAGGGGAGCATaGGAGGTTTCCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSVERGA*EVSIGL
Trigger: CAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCAC...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGGAAGGAGAATCCGTCTaGTTTGCTGTCTGGACTACA +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKEGESV*FAVWTT
Trigger: TGTAGTCCAGACAGCAAACAAGACGGATTCTCCTTC...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CCAACTCCTAGCCTAGAAAGTGCTCCCTTCCTATCTTGCTTAGAAATGTCAGCCATCTTTACCACGAGATaGGGGTCATCGATAATAGCG +
Preference number: 5 (lower is better)
Translates to: PTPSLESAPFLSCLEMSAIFTTR*GSSIIA
Trigger: CGCTATTATCGATGACCCCAATCTCGTGGTAAAGAT...GGCTGACATTTCTAAGCAAGATAGGAAGGGAGCACTTTCTAGGCTAGGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATTCTGGCTCACTTTATGGTACAGCTTAGCGATGCCCTGATGGGTCCAATCCTTCATCTTCCTCCCTTTTaGGGCATTTTATCCCTCATG +
Preference number: 5 (lower is better)
Translates to: ILAHFMVQLSDALMGPILHLPPF*GILSLM
Trigger: CATGAGGGATAAAATGCCCAAAAAGGGAGGAAGATG...AAGGATTGGACCCATCAGGGCATCGCTAAGCTGTACCATAAAGTGAGCCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGGCTTACTTTCCTCCTaGATTGTGGTGTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIGLLSS*IVVFLP
Trigger: GGGAAGAAACACCACAATCAAGGAGGAAAGTAAGCC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACCACCTCGCTGGATGGAAGGAAGCCGGCAGTGTCAAACTCATTCAAAATAGCTCTCCTTTAGGGTaGACGGTAAATATTCTATTC +
Preference number: 5 (lower is better)
Translates to: QHHLAGWKEAGSVKLIQNSSPLG*TVNILF
Trigger: GAATAGAATATTTACCGTCAACCCTAAAGGAGAGCT...ATTTTGAATGAGTTTGACACTGCCGGCTTCCTTCCATCCAGCGAGGTGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AAAGGTGGCAGTGGCTCTCTCCAAAAGGTGAAGTTACTGAAGGTATCCGAACAGAAGAGATGTTGGTCTTaGCATGTTCCTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: KGGSGSLQKVKLLKVSEQKRCWS*HVPVPA
Trigger: AGCTGGTACAGGAACATGCAAAGACCAACATCTCTT...CTGTTCGGATACCTTCAGTAACTTCACCTTTTGGAGAGAGCCACTGCCACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGGTCCACATGAACCATTaGGCAAAGGCATCCAATGCT +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKVHMNH*AKASNA
Trigger: AGCATTGGATGCCTTTGCCAAATGGTTCATGTGGAC...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCCTCGATTGACCTTCCATAGGGCAACTTaGAAATGTGTGGTCCAAATA +
Preference number: 5 (lower is better)
Translates to: MCPLLCQKPCTSGIPRLTFHRAT*KCVVQI
Trigger: TATTTGGACCACACATTTCAAAGTTGCCCTATGGAA...GGTCAATCGAGGAATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS TCA 90 bp GGAGGCAGGCAGCGGATAAACAATGAGCCACATAACGTCTGGTGGTaGAATGATTTCCATCAATGGGAGGGTGTCATATTTGAACTGAAA +
Preference number: 5 (lower is better)
Translates to: GGRQRINNEPHNVWW*NDFHQWEGVIFELK
Trigger: TTTCAGTTCAAATATGACACCCTCCCATTGATGGAAATCATTTCACCACCAGACGTTATGTGGCTCATTGTTTATCCGCTGCCTGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464517.5
CDS-3UTR CAA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATTTACTACAGAGCTGCTaGACGGCGTCTCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYLLQSC*TASRWE
Trigger: CTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAA...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MADLFAFVCPHEPFGKGISDVFM*SSLFRL
Trigger: CAGCCTGAAGAGAGATGACAACATGAACACATCTGA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTCTGAAAACCACGTCGTaGGGGCCATTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFLKTTS*GPFFNF
Trigger: GAAGTTGAAGAATGGCCCCAACGACGTGGTTTTCAG...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCATGCTCCCTTCCTATCTaGCTTAGAAATGTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPCSLPI*LRNVSP
Trigger: GGGGCTGACATTTCTAAGCAAGATAGGAAGGGAGCA...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCAGATCTGTTTGCCTTaGTGTGTCCACATGAACCAT +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIQICLP*CVHMNH
Trigger: ATGGTTCATGTGGACACACAAAGGCAAACAGATCTG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS GCA 90 bp AACCAATCTCACTACACAAAACCAACACTTGCTAAGTGTGAGCACTaGTTTGTCTTCTGGGCTTACCTCCTTGATTGTGGTGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: NQSHYTKPTLAKCEH*FVFWAYLLDCGVSS
Trigger: GGAAGAAACACCACAATCAAGGAGGTAAGCCCAGAAGACAAAGCAGTGCTCACACTTAGCAAGTGTTGGTTTTGTGTAGTGAGATTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS-3UTR CAA 90 bp CACAGAGTCTCACATACGAAGAGATGTTGGTCTTTGCATGTTCCTGTACCAGCTTCCACAGATTCCCCATaGATTTCTATGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: HRVSHTKRCWSLHVPVPASTDSP*ISMSTT
Trigger: AGTGGTTGACATAGAAATCAATGGGGAATCTGTGGA...AGCTGGTACAGGAACATGCAAAGACCAACATCTCTTCGTATGTGAGACTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCTCCACAGATTCCCCATaGATTTCTATGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: MADLFAFVCPHEPFGKGISTDSP*ISMSTT
Trigger: AGTGGTTGACATAGAAATCAATGGGGAATCTGTGGA...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CTAAAAATGAGACTAGTCAGCAAATACTGTAAGGGGCCCATCCACAAGGCCAAGCTGGACTCTTTCATCTaGTGTGGAGAAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: LKMRLVSKYCKGPIHKAKLDSFI*CGEEDL
Trigger: TAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAG...CTTGGCCTTGTGGATGGGCCCCTTACAGTATTTGCTGACTAGTCTCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: DKPTRICVSAAHIQISLSIPQWP*AKVSGR
Trigger: CCTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATGGCAGATCTGTTTGCCTTTGTGTGTCCACATGAACCATTTGGCAAAGGCATCGACACTCCTACTTGCTaGTATGAATACACATCAGCT +
Preference number: 5 (lower is better)
Translates to: MADLFAFVCPHEPFGKGIDTPTC*YEYTSA
Trigger: AGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTC...GATGCCTTTGCCAAATGGTTCATGTGGACACACAAAGGCAAACAGATCTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTGACACTCCTACTTGCTaGTATGAATACACATCAGCT +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGIDTPTC*YEYTSA
Trigger: AGCTGATGTGTATTCATACAAGCAAGTAGGAGTGTC...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAAATGTGCCCCCTACTTaGCCAAAAACCGTGCACATC +
Preference number: 5 (lower is better)
Translates to: DKPTRICVSAAHIQISLSNVPPT*PKTVHI
Trigger: GATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GCTATAATGGAAATGTGCCCCCTACTTTGCCAAAAACCGTGCACATCTGGCATTCTTTCACTTTTCAAATaGTTCTGTCCACGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: AIMEMCPLLCQKPCTSGILSLFK*FCPRAS
Trigger: ACTGGCTCGTGGACAGAACAATTTGAAAAGTGAAAG...AATGCCAGATGTGCACGGTTTTTGGCAAAGTAGGGGGCACATTTCCATTATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTTCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFSDVFM*SSLFRL
Trigger: CAGCCTGAAGAGAGATGACAACATGAACACATCTGA...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CCTTTAGGGTTGACGGTAAATATTCTATTCAAAGACACTCCTACTTGCTTGTATGAAGGATCTCCGTTTTaGGGAAAATACAGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PLGLTVNILFKDTPTCLYEGSPF*GKYRAA
Trigger: GGCGGCCCTGTATTTTCCCAAAAACGGAGATCCTTC...ATACAAGCAAGTAGGAGTGTCTTTGAATAGAATATTTACCGTCAACCCTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAGGAGGGGTGCTGCTGTaGTCCAGTTATAATATTTAC +
Preference number: 5 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPGGVLL*SSYNIY
Trigger: GTAAATATTATAACTGGACAACAGCAGCACCCCTCC...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAAAGAGATGTTGGTCTTaGCATGTTCCTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPKRCWS*HVPVPA
Trigger: AGCTGGTACAGGAACATGCAAAGACCAACATCTCTT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCAACCAACCAGTTTCTTaGGAGAGCTCCCAACAGAAG +
Preference number: 5 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSNQPVS*ESSQQK
Trigger: CTTCTGTTGGGAGCTCTCCAAAGAAACTGGTTGGTT...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAGTCCACATGAACCATTaGGCAAAGGCATCCAATGCT +
Preference number: 5 (lower is better)
Translates to: DKPTRICVSAAHIQISLSVHMNH*AKASNA
Trigger: AGCATTGGATGCCTTTGCCAAATGGTTCATGTGGAC...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCAATCTTTACCACGAGATaGGGGTCATCGATAATAGCG +
Preference number: 5 (lower is better)
Translates to: DKPTRICVSAAHIQISLSIFTTR*GSSIIA
Trigger: CGCTATTATCGATGACCCCAATCTCGTGGTAAAGAT...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCGGAGGGGTGCTGCTGTaGTCCAGTTATAATATTTAC +
Preference number: 5 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSGGVLL*SSYNIY
Trigger: GTAAATATTATAACTGGACAACAGCAGCACCCCTCC...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCATCTTCCTCCCTTTTaGGGCATTTTATCCCTCATG +
Preference number: 5 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSHLPPF*GILSLM
Trigger: CATGAGGGATAAAATGCCCAAAAAGGGAGGAAGATG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACATCTTCCTCCCTTTTaGGGCATTTTATCCCTCATG +
Preference number: 5 (lower is better)
Translates to: DKPTRICVSAAHIQISLSHLPPF*GILSLM
Trigger: CATGAGGGATAAAATGCCCAAAAAGGGAGGAAGATG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAGGGAAAAACAGGTTTTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAAAACCTGTTTTTCCC...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCAACATACGAAGAGATGTaGGTCTTTGCATGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPTYEEM*VFACSC
Trigger: ACAGGAACATGCAAAGACCAACATCTCTTCGTATGT...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp CAGCACATGACCTCAGCATCACTGGGTTATAGTCATGTACACAAAGATAAACCACTTTCACTTTTCAAATaGTTCTGTCCACGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: QHMTSASLGYSHVHKDKPLSLFK*FCPRAS
Trigger: ACTGGCTCGTGGACAGAACAATTTGAAAAGTGAAAG...TGGTTTATCTTTGTGTACATGACTATAACCCAGTGATGCTGAGGTCATGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS CCA 90 bp AATGGCCTGAAAGTGACTTTTATCACAAATTTTTCTACTGCTCAATaGGCTGGACTCTTTCATCTTGTGTGGAGAAGAAGACTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: NGLKVTFITNFSTAQ*AGLFHLVWRRRLSS
Trigger: GCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAAATTTGTGATAAAAGTCACTTTCAGGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS-3UTR CAA 90 bp GATAAACCAACTCGTATATGCGTGAGTGCAGCCCATATACAAATCTCACTTTCACTGGACTCTTTCATCTaGTGTGGAGAAGAAGACTTA +
Preference number: 5 (lower is better)
Translates to: DKPTRICVSAAHIQISLSLDSFI*CGEEDL
Trigger: TAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAG...TGAAAGTGAGATTTGTATATGGGCTGCACTCACGCATATACGAGTTGGTTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCTTTCACTTTTCAAATaGTTCTGTCCACGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSLSLFK*FCPRAS
Trigger: ACTGGCTCGTGGACAGAACAATTTGAAAAGTGAAAG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS-3UTR CAA 90 bp AAAACGTGGTCGACTACTTCACAGAGTCTCACATACGAAGAGATGTTGGTCTTTCTCAGGAATATCATCTaGGAATGGAGGTATATCATT +
Preference number: 5 (lower is better)
Translates to: KTWSTTSQSLTYEEMLVFLRNII*EWRYII
Trigger: AATGATATACCTCCATTCCAAGATGATATTCCTGAG...AAAGACCAACATCTCTTCGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp ATGTTCCTGTACCAGCTCTCCTTTAGGGTTGACGGTAAATATTCTATTCAAAGAGGGAAAAACAGGTTTTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: MFLYQLSFRVDGKYSIQRGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAAAACCTGTTTTTCCC...TCTTTGAATAGAATATTTACCGTCAACCCTAAAGGAGAGCTGGTACAGGAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS-3UTR CAA 90 bp ATTCATTTCCATAGGGCAACTTTGAAATGTGTGGTCCAAATACAGCATTCCAGCCTCAGGAATATCATCTaGGAATGGAGGTATATCATT +
Preference number: 5 (lower is better)
Translates to: IHFHRATLKCVVQIQHSSLRNII*EWRYII
Trigger: AATGATATACCTCCATTCCAAGATGATATTCCTGAG...GCTGGAATGCTGTATTTGGACCACACATTTCAAAGTTGCCCTATGGAAATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000425416.6
ENST00000674199.1
CDS GCA 72 bp CCGAGGTGCTCTCCACGCCACTGTCCACGCCCGAGCTaGCCACCGACTGCGGGGACTGGTTGGCTGACCGGG +
Preference number: 6 (lower is better)
Translates to: PRCSPRHCPRPS*PPTAGTGWLTG
Trigger: CCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCGTGGAGAGCACCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 72 bp CTGCACCGAGCGGCGCCGCGCGTGGCCGCCTTTGTATaGCAAACACCCAGCCCGCCGCCGGCTGTCAGCGCA +
Preference number: 6 (lower is better)
Translates to: LHRAAPRVAAFV*QTPSPPPAVSA
Trigger: TGCGCTGACAGCCGGCGGCGGGCTGGGTGTTTGCAATACAAAGGCGGCCACGCGCGGCGCCGCTCGGTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256720.6
CDS GCA 72 bp TCCACGCCACTGTCCACGCCCGAGCTGCCCACCGACTaGGGGGACTGGTTGGCTGACCGGGCTCCGTTGTCG +
Preference number: 6 (lower is better)
Translates to: STPLSTPELPTD*GDWLADRAPLS
Trigger: CGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCGTGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 72 bp GGGAGCTCTTGCCCTGCGAGGTCTCCCAGCTGGAGCTaGGAATGCCGTCCTGTTCCCCCATGGCCCGCCCTG +
Preference number: 6 (lower is better)
Translates to: GSSCPARSPSWS*ECRPVPPWPAL
Trigger: CAGGGCGGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS CAA 72 bp ATGGTCTGCACCGAGCGGCGCCGCGCGTGGCCGCCTTaGTATTGCAAACACCCAGCCCGCCGCCGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: MVCTERRRAWPP*YCKHPARRRLS
Trigger: TGACAGCCGGCGGCGGGCTGGGTGTTTGCAATACAAAGGCGGCCACGCGCGGCGCCGCTCGGTGCAGACCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256720.6
CDS CAA 90 bp ATTCATGGTCTGCACCGAGCGGCGCCGCGCGTGGCCGCCTTTGTATaGCAAACACCCAGCCCGCCGCCGGCTGTCAGCGCAGCTCGCCTT +
Preference number: 6 (lower is better)
Translates to: IHGLHRAAPRVAAFV*QTPSPPPAVSAARL
Trigger: AAGGCGAGCTGCGCTGACAGCCGGCGGCGGGCTGGGTGTTTGCAATACAAAGGCGGCCACGCGCGGCGCCGCTCGGTGCAGACCATGAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256720.6
CDS TCA 72 bp CTGCCAAGCGGTGGTCCAGGTGCGGAACGGTGGCTCTaGACAGGAGGGACAGGCAGCTCCCTGCGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LPSGGPGAERWL*TGGTGSSLRLS
Trigger: GGAGAGGCGCAGGGAGCTGCCTGTCCCTCCTGTTCAGAGCCACCGTTCCGCACCTGGACCACCGCTTGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464517.5
ENST00000480315.1
CDS GCA 72 bp GCCTCCACTCCCGCCTCTGCCAAGCGGTGGTCCAGGTaGGGAACGGTGGCTCTGAACAGGAGGGACAGGCAG +
Preference number: 6 (lower is better)
Translates to: ASTPASAKRWSR*GTVALNRRDRQ
Trigger: CTGCCTGTCCCTCCTGTTCAGAGCCACCGTTCCGCACCTGGACCACCGCTTGGCAGAGGCGGGAGTGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464517.5
ENST00000480315.1
CDS CCA 72 bp CTGTCCACGCCCGAGCTGCCCACCGACTGCGGGGACTaGTTGGCTGACCGGGCTCCGTTGTCGCTTGCATGT +
Preference number: 6 (lower is better)
Translates to: LSTPELPTDCGD*LADRAPLSLAC
Trigger: ACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 90 bp ACGCCACTGTCCACGCCCGAGCTGCCCACCGACTGCGGGGACTGGTaGGCTGACCGGGCTCCGTTGTCGCTTGCATGTTTTGCGAGTCCG +
Preference number: 6 (lower is better)
Translates to: TPLSTPELPTDCGDW*ADRAPLSLACFASP
Trigger: CGGACTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGACAGTGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS TCA 72 bp GCCCGAGCTGCCCACCGACTGCGGGGACTGGTTGGCTaGCCGGGCTCCGTTGTCGCTTGCATGTTTTGCGAG +
Preference number: 6 (lower is better)
Translates to: ARAAHRLRGLVG*PGSVVACMFCE
Trigger: CTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 72 bp ACGGCGTCTCGCTGGGAGCGATCACTTGGGCTGGCGTaGTGGGGTCCAGGCCTCTCATCCTGTCCACAGAGC +
Preference number: 6 (lower is better)
Translates to: TASRWERSLGLA*WGPGLSSCPQS
Trigger: GCTCTGTGGACAGGATGAGAGGCCTGGACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGCGAGACGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp CCACGCCCGAGCTGCCCACCGACTGCGGGGACTGGTTaGCTGACCGGGCTCCGTTGTCGCTTGCATGTTTTG +
Preference number: 6 (lower is better)
Translates to: PRPSCPPTAGTG*LTGLRCRLHVL
Trigger: CAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp CCCAGCTGGAGCTGCGAATGCCGTCCTGTTCCCCCATaGCCCGCCCTGTATGGTGCTGTCTGCCTCCTCACC +
Preference number: 6 (lower is better)
Translates to: PSWSCECRPVPP*PALYGAVCLLT
Trigger: GGTGAGGAGGCAGACAGCACCATACAGGGCGGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS CCA 72 bp AGTCTGGGGAGCTCTTGCCCTGCGAGGTCTCCCAGCTaGAGCTGCGAATGCCGTCCTGTTCCCCCATGGCCC +
Preference number: 6 (lower is better)
Translates to: SLGSSCPARSPS*SCECRPVPPWP
Trigger: GGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS GCA 72 bp TCTTGCCCTGCGAGGTCTCCCAGCTGGAGCTGCGAATaGCGTCCTGTTCCCCCATGGCCCGCCCTGTATGGT +
Preference number: 6 (lower is better)
Translates to: SCPARSPSWSCE*RPVPPWPALYG
Trigger: ACCATACAGGGCGGGCCATGGGGGAACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS GCA 72 bp AACGGTGGCTCTGAACAGGAGGGACAGGCAGCTCCCTaGGCCTCTCCAGCCGGGAGGCAGGCAGCGGATAAA +
Preference number: 6 (lower is better)
Translates to: NGGSEQEGQAAP*ASPAGRQAADK
Trigger: TTTATCCGCTGCCTGCCTCCCGGCTGGAGAGGCGCAGGGAGCTGCCTGTCCCTCCTGTTCAGAGCCACCGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464517.5
ENST00000480315.1
CDS CCA 72 bp ATGGTGACAGCCTCCACTCCCGCCTCTGCCAAGCGGTaGTCCAGGTGCGGAACGGTGGCTCTGAACAGGAGG +
Preference number: 6 (lower is better)
Translates to: MVTASTPASAKR*SRCGTVALNRR
Trigger: CCTCCTGTTCAGAGCCACCGTTCCGCACCTGGACCACCGCTTGGCAGAGGCGGGAGTGGAGGCTGTCACCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464517.5
ENST00000480315.1
CDS CAA 72 bp TCCACGCCCGAGCTGCCCACCGACTGCGGGGACTGGTaGGCTGACCGGGCTCCGTTGTCGCTTGCATGTTTT +
Preference number: 6 (lower is better)
Translates to: STPELPTDCGDW*ADRAPLSLACF
Trigger: AAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGTGGGCAGCTCGGGCGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 72 bp TGCTTTACCCTGGTGGCCAAGCTGAGCTGCGGCGGTTaGTCTCCGGTGCTATGGGCCTTGCCAGCCAAGCAC +
Preference number: 6 (lower is better)
Translates to: CFTLVAKLSCGG*SPVLWALPAKH
Trigger: GTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGGTAAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS GCA 72 bp CTTCATCCTGATGGTGACAGCCTCCACTCCCGCCTCTaGCAAGCGGTGGTCCAGGTGCGGAACGGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: LHPDGDSLHSRL*QAVVQVRNGGS
Trigger: AGAGCCACCGTTCCGCACCTGGACCACCGCTTGGCAGAGGCGGGAGTGGAGGCTGTCACCATCAGGATGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464517.5
ENST00000480315.1
CDS CCA 72 bp TGGGCCACTGCTGGGTGGCTGCTGTTAGGACAGGCATaGCTGGCCCCGGTCTTGCCCTTCATCTCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: WATAGWLLLGQA*LAPVLPFISLP
Trigger: GGGAAGAGAGATGAAGGGCAAGACCGGGGCCAGCCATGCCTGTCCTAACAGCAGCCACCCAGCAGTGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000464517.5
ENST00000480315.1
ENST00000495907.5
CDS CCA 72 bp ATTCACCTGATGGTTTGGCGGACTCGTGAAGCCACGTaGTTGCAAATACGAGCGGCGCCGCGCGTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: IHLMVWRTREAT*LQIRAAPRVAA
Trigger: GGCGGCCACGCGCGGCGCCGCTCGTATTTGCAACCACGTGGCTTCACGAGTCCGCCAAACCATCAGGTGAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CCA 72 bp CAGTTCAGGGTCCTACATCACCATCCAGTGATGCTCTaGCACGCGGCCACCCTCAGAGCCGCAGACGGCTGC +
Preference number: 6 (lower is better)
Translates to: QFRVLHHHPVML*HAATLRAADGC
Trigger: GCAGCCGTCTGCGGCTCTGAGGGTGGCCGCGTGCCAGAGCATCACTGGATGGTGATGTAGGACCCTGAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475286.1
CDS CAA 72 bp CACCTGATGGTTTGGCGGACTCGTGAAGCCACGTGGTaGCAAATACGAGCGGCGCCGCGCGTGGCCGCCTTT +
Preference number: 6 (lower is better)
Translates to: HLMVWRTREATW*QIRAAPRVAAF
Trigger: AAAGGCGGCCACGCGCGGCGCCGCTCGTATTTGCAACCACGTGGCTTCACGAGTCCGCCAAACCATCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CAA 72 bp CTCCACAGGACAGCTAGCACATGGAACGGCTCTGGCTaGATGGCAGCCCTAGGAAGGACCAGGCCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LHRTASTWNGSG*MAALGRTRPVA
Trigger: GGCCACCGGCCTGGTCCTTCCTAGGGCTGCCATCAAGCCAGAGCCGTTCCATGTGCTAGCTGTCCTGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS GCA 72 bp CCCACTGCCCCTCCCTGGTTGAGGTGCAGCCCTCTCTaGAAGTCACCCCGTGCTGGGACAGGAAAGATTCCA +
Preference number: 6 (lower is better)
Translates to: PTAPPWLRCSPL*KSPRAGTGKIP
Trigger: TGGAATCTTTCCTGTCCCAGCACGGGGTGACTTGCAGAGAGGGCTGCACCTCAACCAGGGAGGGGCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS GCA 72 bp TTCACTCTGGACTCCACTGCTACCCCTGACCCCCACTaGCCCTCCCTGGTTGAGGTGCAGCCCTCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: FTLDSTATPDPH*PSLVEVQPSLQ
Trigger: TTGCAGAGAGGGCTGCACCTCAACCAGGGAGGGGCAGTGGGGGTCAGGGGTAGCAGTGGAGTCCAGAGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS CCA 72 bp CGGGAGCGCAGGACCCCCATCTTCCCAAAGCGGACGTaGAAAGGGGAGCATTGGAGGTTTCCATTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RERRTPIFPKRT*KGEHWRFPLGW
Trigger: CCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAAGATGGGGGTCCTGCGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp GCCAAGCTGAGCTGCGGCGGTTGCTCTCCGGTGCTATaGGCCTTGCCAGCCAAGCACTGCTCTGGCTTACTT +
Preference number: 6 (lower is better)
Translates to: AKLSCGGCSPVL*ALPAKHCSGLL
Trigger: AAGTAAGCCAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGCTTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS CCA 72 bp CCTCCTCAGGCCCTTCAGGGACGTGGCACCTCTCAGTaGCCGTCCAGTCTCTGGAGCCTCTTCTTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: PPQALQGRGTSQ*PSSLWSLFFSS
Trigger: GCTGGAAAAGAAGAGGCTCCAGAGACTGGACGGCCACTGAGAGGTGCCACGTCCCTGAAGGGCCTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CCA 72 bp TCATGCCATCAACCCTCCTCAGGCCCTTCAGGGACGTaGCACCTCTCAGTGGCCGTCCAGTCTCTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: SCHQPSSGPSGT*HLSVAVQSLEP
Trigger: AGGCTCCAGAGACTGGACGGCCACTGAGAGGTGCCACGTCCCTGAAGGGCCTGAGGAGGGTTGATGGCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CCA 72 bp GGCTGCAGTGAGCTGAGATCGTGCCAATCTTATCCCTaGACTGGGTCATGGCAGGCGGGAGTCCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GCSELRSCQSYP*TGSWQAGVLQP
Trigger: GGGCTGGAGGACTCCCGCCTGCCATGACCCAGTCCAGGGATAAGATTGGCACGATCTCAGCTCACTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423495.1
CDS CAA 72 bp CTGAGCTGCGGCGGTTGCTCTCCGGTGCTATGGGCCTaGCCAGCCAAGCACTGCTCTGGCTTACTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LSCGGCSPVLWA*PAKHCSGLLSS
Trigger: GGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS GCA 72 bp ATGCCGTCCTGTTCCCCCATGGCCCGCCCTGTATGGTaGTGTCTGCCTCCTCACCCAGCATCAGGAGAGAAA +
Preference number: 6 (lower is better)
Translates to: MPSCSPMARPVW*CLPPHPASGEK
Trigger: TTTCTCTCCTGATGCTGGGTGAGGAGGCAGACAGCACCATACAGGGCGGGCCATGGGGGAACAGGACGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS GCA 72 bp TTGGAATCCATGACCAAGCCGAGTCTGGGGAGCTCTTaGCCTGCGAGGTCTCCCAGCTGGAGCTGCGAATGC +
Preference number: 6 (lower is better)
Translates to: LESMTKPSLGSS*PARSPSWSCEC
Trigger: GCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACTCGGCTTGGTCATGGATTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS GCA 72 bp ATGGCAGCCCTAGGAAGGACCAGGCCGGTGGCCATCTaGCACTGGAGCACCTTGGCCTTCCAAGAGGACATA +
Preference number: 6 (lower is better)
Translates to: MAALGRTRPVAI*HWSTLAFQEDI
Trigger: TATGTCCTCTTGGAAGGCCAAGGTGCTCCAGTGGCAGATGGCCACCGGCCTGGTCCTTCCTAGGGCTGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CCA 72 bp CTGAGATCGTGCCAATCTTATCCCTGGACTGGGTCATaGCAGGCGGGAGTCCTCCAGCCCTCCTCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: LRSCQSYPWTGS*QAGVLQPSSLH
Trigger: GTGGAGAGAGGAGGGCTGGAGGACTCCCGCCTGCCATGACCCAGTCCAGGGATAAGATTGGCACGATCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423495.1
CDS CCA 72 bp GCTGGGAAGGTGAGGAGCTTCTGCAGCTGTGGGAGCTaGGACACTATGGCCTTGGCCAATTCGTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: AGKVRSFCSCGS*DTMALANSSRP
Trigger: AGGCCTGGACGAATTGGCCAAGGCCATAGTGTCCCAGCTCCCACAGCTGCAGAAGCTCCTCACCTTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp ACCGACTGCGGGGACTGGTTGGCTGACCGGGCTCCGTaGTCGCTTGCATGTTTTGCGAGTCCGGAAGGATCT +
Preference number: 6 (lower is better)
Translates to: TDCGDWLADRAP*SLACFASPEGS
Trigger: AGATCCTTCCGGACTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGCAGTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 90 bp GTGGCCAAGCTGAGCTGCGGCGGTTGCTCTCCGGTGCTATGGGCCTaGCCAGCCAAGCACTGCTCTGGCTTACTTTCCTCCTTGATTGTG +
Preference number: 6 (lower is better)
Translates to: VAKLSCGGCSPVLWA*PAKHCSGLLSSLIV
Trigger: CACAATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS TCA 72 bp GGACCACAGTCTCCCAACAGTTACAGAGCCAGGAGGTaGCACCTATGCTGCTGGCTCCTGACCTTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: GPQSPNSYRARR*HLCCWLLTFLP
Trigger: GGGGAGGAAGGTCAGGAGCCAGCAGCATAGGTGTCACCTCCTGGCTCTGTAACTGTTGGGAGACTGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS GCA 72 bp GATGATTCATGCTTTACCCTGGTGGCCAAGCTGAGCTaGGGCGGTTGCTCTCCGGTGCTATGGGCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: DDSCFTLVAKLS*GGCSPVLWALP
Trigger: TGGCAAGGCCCATAGCACCGGAGAGCAACCGCCGCAGCTCAGCTTGGCCACCAGGGTAAAGCATGAATCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS CCA 72 bp TCTTCTTTACTACAGAGCTGCTTGACGGCGTCTCGCTaGGAGCGATCACTTGGGCTGGCGTGCTGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: SSLLQSCLTASR*ERSLGLACWGP
Trigger: TGGACCCCAGCACGCCAGCCCAAGTGATCGCTCCCAGCGAGACGCCGTCAAGCAGCTCTGTAGTAAAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp TTCATGGTCTGCACATCTTATCCCTGGACTGGGTCATaGCAGGCGGGAGTCCTCCAGCCCTCCTCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: FMVCTSYPWTGS*QAGVLQPSSLH
Trigger: GTGGAGAGAGGAGGGCTGGAGGACTCCCGCCTGCCATGACCCAGTCCAGGGATAAGATGTGCAGACCATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441684.5
CDS CAA 72 bp GCGGGGACTGGTTGGCTGACCGGGCTCCGTTGTCGCTaGCATGTTTTGCGAGTCCGGAAGGATCTCCGTTTT +
Preference number: 6 (lower is better)
Translates to: AGTGWLTGLRCR*HVLRVRKDLRF
Trigger: AAAACGGAGATCCTTCCGGACTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACCAGTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 72 bp ATTGGAATCCATGACCAAGCCGAGTCTGGGGAGCTCTaGCCCTGCGAGGTCTCCCAGCTGGAGCTGCGAATG +
Preference number: 6 (lower is better)
Translates to: IGIHDQAESGEL*PCEVSQLELRM
Trigger: CATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACTCGGCTTGGTCATGGATTCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS CAA 90 bp CCGTTTATTCACCTGATGGTTTGGCGGACTCGTGAAGCCACGTGGTaGCAAATACGAGCGGCGCCGCGCGTGGCCGCCTTTGTATTGCAA +
Preference number: 6 (lower is better)
Translates to: PFIHLMVWRTREATW*QIRAAPRVAAFVLQ
Trigger: TTGCAATACAAAGGCGGCCACGCGCGGCGCCGCTCGTATTTGCAACCACGTGGCTTCACGAGTCCGCCAAACCATCAGGTGAATAAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441684.5
CDS CAA 90 bp TCTCTCATTATTGGAATCCATGACCAAGCCGAGTCTGGGGAGCTCTaGCCCTGCGAGGTCTCCCAGCTGGAGCTGCGAATGCCGTCCTGT +
Preference number: 6 (lower is better)
Translates to: SLIIGIHDQAESGEL*PCEVSQLELRMPSC
Trigger: ACAGGACGGCATTCGCAGCTCCAGCTGGGAGACCTCGCAGGGCAAGAGCTCCCCAGACTCGGCTTGGTCATGGATTCCAATAATGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449576.6
CDS TCA 72 bp AGAAAGCCAGGCCTAGCACTTCCGATGCTGGGAAGGTaGGGAGCTTCTGCAGCTGTGGGAGCTGGGACACTA +
Preference number: 6 (lower is better)
Translates to: RKPGLALPMLGR*GASAAVGAGTL
Trigger: TAGTGTCCCAGCTCCCACAGCTGCAGAAGCTCCTCACCTTCCCAGCATCGGAAGTGCTAGGCCTGGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS GCA 72 bp CCTCGGCCGCAACTGCAAGATGAGGGGCAGTCCTTTTaGAATCTACCAGGCTACTGGGAGTGGGTGACCACT +
Preference number: 6 (lower is better)
Translates to: PRPQLQDEGQSF*NLPGYWEWVTT
Trigger: AGTGGTCACCCACTCCCAGTAGCCTGGTAGATTGCAAAAGGACTGCCCCTCATCTTGCAGTTGCGGCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000449576.6
ENST00000674199.1
CDS GCA 72 bp GCCACGAGCCACAAAACCCATAGAGGCACTCAGGCGTaGAACTCACGCATAAGGAGCCCAGCCCTACGAGAA +
Preference number: 6 (lower is better)
Translates to: ATSHKTHRGTQA*NSRIRSPALRE
Trigger: TTCTCGTAGGGCTGGGCTCCTTATGCGTGAGTTGCACGCCTGAGTGCCTCTATGGGTTTTGTGGCTCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS CCA 72 bp AGCCTGCGGCAGCTCTCCCCACAGCCAAAGCATTTCTaGGTTCTTCTGCCCTGTCCTTTCCGTGGACTTGCT +
Preference number: 6 (lower is better)
Translates to: SLRQLSPQPKHF*VLLPCPFRGLA
Trigger: AGCAAGTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTGTGGGGAGAGCTGCCGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp GGAAGGACTTTCCGAAGGATGGAACAGGGAAGACTGTaGAGGGCAAGAACTAGACAGACCTCCCTCGGCCGC +
Preference number: 6 (lower is better)
Translates to: GRTFRRMEQGRL*RARTRQTSLGR
Trigger: GCGGCCGAGGGAGGTCTGTCTAGTTCTTGCCCTCCACAGTCTTCCCTGTTCCATCCTTCGGAAAGTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp CACGTAATTCATGGTCTGCACATCTTATCCCTGGACTaGGTCATGGCAGGCGGGAGTCCTCCAGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: HVIHGLHILSLD*VMAGGSPPALL
Trigger: GAGGAGGGCTGGAGGACTCCCGCCTGCCATGACCCAGTCCAGGGATAAGATGTGCAGACCATGAATTACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441684.5
CDS CCA 72 bp TTCCGATGCTGGGAAGGTGAGGAGCTTCTGCAGCTGTaGGAGCTGGGACACTATGGCCTTGGCCAATTCGTC +
Preference number: 6 (lower is better)
Translates to: FRCWEGEELLQL*ELGHYGLGQFV
Trigger: GACGAATTGGCCAAGGCCATAGTGTCCCAGCTCCCACAGCTGCAGAAGCTCCTCACCTTCCCAGCATCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CCA 72 bp GTTGAGGTGCAGCCCTCTCTGCAAGTCACCCCGTGCTaGGACAGGAAAGATTCCATATGCAGAGTGCGGTGC +
Preference number: 6 (lower is better)
Translates to: VEVQPSLQVTPC*DRKDSICRVRC
Trigger: GCACCGCACTCTGCATATGGAATCTTTCCTGTCCCAGCACGGGGTGACTTGCAGAGAGGGCTGCACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS CAA 72 bp TTAGGCAGAAGAGGGAGGTGGCCTGCGTTTGATGGCTaGGCAGCTGCGCGCTCCTCATCACTGGAGGATGAT +
Preference number: 6 (lower is better)
Translates to: LGRRGRWPAFDG*AAARSSSLEDD
Trigger: ATCATCCTCCAGTGATGAGGAGCGCGCAGCTGCCAAGCCATCAAACGCAGGCCACCTCCCTCTTCTGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS CAA 90 bp GCGCAGGACCCCCATCTTCCCAAAGCGGACGTGGAAAGGGGAGCATaGGAGGTTTCCATTGGGCTGGCGGATGACAATGATGTCAATGCA +
Preference number: 6 (lower is better)
Translates to: AQDPHLPKADVERGA*EVSIGLADDNDVNA
Trigger: TGCATTGACATCATTGTCATCCGCCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAAGATGGGGGTCCTGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS CAA 90 bp CGGCACGTGCCTTGGTACTGCGTGGTGACACTGAAAACCACGTCGTaGGGGCCATTCTTCAACTTCAAGAAGCTGCTCGGAAGTCAGCCG +
Preference number: 6 (lower is better)
Translates to: RHVPWYCVVTLKTTS*GPFFNFKKLLGSQP
Trigger: CGGCTGACTTCCGAGCAGCTTCTTGAAGTTGAAGAATGGCCCCAACGACGTGGTTTTCAGTGTCACCACGCAGTACCAAGGCACGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS GCA 72 bp CGTTCAGGCCACAGCAACCCTTCTCCAAAGGTCTCGTaGACAAACACAGATGCGCTTTCTGCCGACCGTCAC +
Preference number: 6 (lower is better)
Translates to: RSGHSNPSPKVS*TNTDALSADRH
Trigger: GTGACGGTCGGCAGAAAGCGCATCTGTGTTTGTGCACGAGACCTTTGGAGAAGGGTTGCTGTGGCCTGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS GCA 72 bp CCTCCCCAACAGCAAACAGGCCACCACCATAAATGCTaGCCGTTCAGGCCACAGCAACCCTTCTCCAAAGGT +
Preference number: 6 (lower is better)
Translates to: PPQQQTGHHHKC*PFRPQQPFSKG
Trigger: ACCTTTGGAGAAGGGTTGCTGTGGCCTGAACGGGCAGCATTTATGGTGGTGGCCTGTTTGCTGTTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS GCA 72 bp CAAGTCACCCCGTGCTGGGACAGGAAAGATTCCATATaGAGAGTGCGGTGCACACACCAGCGTTCACAGGAG +
Preference number: 6 (lower is better)
Translates to: QVTPCWDRKDSI*RVRCTHQRSQE
Trigger: CTCCTGTGAACGCTGGTGTGTGCACCGCACTCTGCATATGGAATCTTTCCTGTCCCAGCACGGGGTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS CCA 72 bp CGTTTGATGGCTTGGCAGCTGCGCGCTCCTCATCACTaGAGGATGATTCATGCTTTACCCTGGTGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: RLMAWQLRAPHH*RMIHALPWWPS
Trigger: GCTTGGCCACCAGGGTAAAGCATGAATCATCCTCCAGTGATGAGGAGCGCGCAGCTGCCAAGCCATCAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS CCA 72 bp CAGGGACGTGGCACCTCTCAGTGGCCGTCCAGTCTCTaGAGCCTCTTCTTTTCCAGCTCTGACTTATACTCC +
Preference number: 6 (lower is better)
Translates to: QGRGTSQWPSSL*SLFFSSSDLYS
Trigger: GGAGTATAAGTCAGAGCTGGAAAAGAAGAGGCTCCAGAGACTGGACGGCCACTGAGAGGTGCCACGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS CCA 72 bp GCTTCTGCAGCTGTGGGAGCTGGGACACTATGGCCTTaGCCAATTCGTCCAGGCCTTTGCCAGTGGAACAAA +
Preference number: 6 (lower is better)
Translates to: ASAAVGAGTLWP*PIRPGLCQWNK
Trigger: TTTGTTCCACTGGCAAAGGCCTGGACGAATTGGCCAAGGCCATAGTGTCCCAGCTCCCACAGCTGCAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp CCACAGATAGATGGTGCCCTCACAGCGGCACGTGCCTaGGTACTGCGTGGTGACACTGAAAACCACGTCGTT +
Preference number: 6 (lower is better)
Translates to: PQIDGALTAARA*VLRGDTENHVV
Trigger: AACGACGTGGTTTTCAGTGTCACCACGCAGTACCAAGGCACGTGCCGCTGTGAGGGCACCATCTATCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000487346.1
ENST00000674199.1
CDS CAA 72 bp AGCTTCTGCAGCTGTGGGAGCTGGGACACTATGGCCTaGGCCAATTCGTCCAGGCCTTTGCCAGTGGAACAA +
Preference number: 6 (lower is better)
Translates to: SFCSCGSWDTMA*ANSSRPLPVEQ
Trigger: TTGTTCCACTGGCAAAGGCCTGGACGAATTGGCCAAGGCCATAGTGTCCCAGCTCCCACAGCTGCAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS GCA 72 bp AGGGCAAGAACTAGACAGACCTCCCTCGGCCGCAACTaGAAGATGAGGGGCAGTCCTTTTGCAATCTACCAG +
Preference number: 6 (lower is better)
Translates to: RARTRQTSLGRN*KMRGSPFAIYQ
Trigger: CTGGTAGATTGCAAAAGGACTGCCCCTCATCTTGCAGTTGCGGCCGAGGGAGGTCTGTCTAGTTCTTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp CCCATCTTCCCAAAGCGGACGTGGAAAGGGGAGCATTaGAGGTTTCCATTGGGCTGGCGGATGACAATGATG +
Preference number: 6 (lower is better)
Translates to: PIFPKRTWKGEH*RFPLGWRMTMM
Trigger: CATCATTGTCATCCGCCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS CAA 90 bp AAGGTGAGGAGCTTCTGCAGCTGTGGGAGCTGGGACACTATGGCCTaGGCCAATTCGTCCAGGCCTTTGCCAGTGGAACAAAACAGAAAG +
Preference number: 6 (lower is better)
Translates to: KVRSFCSCGSWDTMA*ANSSRPLPVEQNRK
Trigger: CTTTCTGTTTTGTTCCACTGGCAAAGGCCTGGACGAATTGGCCAAGGCCATAGTGTCCCAGCTCCCACAGCTGCAGAAGCTCCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS TCA 72 bp GTCCTAGACTCTCTTCTCCTCTCCCGTTTATTCACCTaGTGGTTTGGCGGACTCGTGAAGCCACGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: VLDSLLLSRLFT*WFGGLVKPRGC
Trigger: GCAACCACGTGGCTTCACGAGTCCGCCAAACCATCAGGTGAATAAACGGGAGAGGAGAAGAGAGTCTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423495.1
ENST00000441684.5
CDS GCA 72 bp TGCTCTCCGGTGCTATGGGCCTTGCCAGCCAAGCACTaGTCTGGCTTACTTTCCTCCTTGATTGTGGTGTTT +
Preference number: 6 (lower is better)
Translates to: CSPVLWALPAKH*SGLLSSLIVVF
Trigger: AAACACCACAATCAAGGAGGAAAGTAAGCCAGAGCAGTGCTTGGCTGGCAAGGCCCATAGCACCGGAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000674199.1
CDS GCA 72 bp CTGGCTCAGCTTCCATTAACTTCAGATAAAGGCCCCTaGTCATGCGAACCTGGGTCTCCTGGTGGATTCTCC +
Preference number: 6 (lower is better)
Translates to: LAQLPLTSDKGP*SCEPGSPGGFS
Trigger: GGAGAATCCACCAGGAGACCCAGGTTCGCATGAGCAGGGGCCTTTATCTGAAGTTAATGGAAGCTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396098.5
ENST00000396099.5
ENST00000464517.5
ENST00000480315.1
ENST00000495907.5
CDS GCA 72 bp CGGGAACCGGAAGGACTCTGCTCTAGAAGAACGAAATaGGGAACACGGTTCTCCTGCAGCAATTCCCAACTC +
Preference number: 6 (lower is better)
Translates to: REPEGLCSRRTK*GTRFSCSNSQL
Trigger: GAGTTGGGAATTGCTGCAGGAGAACCGTGTTCCGCATTTCGTTCTTCTAGAGCAGAGTCCTTCCGGTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS GCA 72 bp CTGCCCCACGTAATTCATGGTCTGCACCTGGTCAGGTaGACGAAGTCTAGGGTTCAGAATCCAACAGGCTCA +
Preference number: 6 (lower is better)
Translates to: LPHVIHGLHLVR*TKSRVQNPTGS
Trigger: TGAGCCTGTTGGATTCTGAACCCTAGACTTCGTGCACCTGACCAGGTGCAGACCATGAATTACGTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495907.5
CDS CCA 72 bp AGGCCTCTCATCCTGTCCACAGAGCCCCTTTTCAGCTaGCATTCCATTCTCGAAGCTCCTTCTGACAGGATG +
Preference number: 6 (lower is better)
Translates to: RPLILSTEPLFS*HSILEAPSDRM
Trigger: CATCCTGTCAGAAGGAGCTTCGAGAATGGAATGCCAGCTGAAAAGGGGCTCTGTGGACAGGATGAGAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp CCAGCAGCTCCATGGCCTCATCCGAGCTCATCTCGATaGGGAACATGTCCTCATCCTCAGATGTGTTCATGT +
Preference number: 6 (lower is better)
Translates to: PAAPWPHPSSSR*GTCPHPQMCSC
Trigger: ACATGAACACATCTGAGGATGAGGACATGTTCCCCATCGAGATGAGCTCGGATGAGGCCATGGAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp AGCAATTCTAGAGAACTCCACAGGACAGCTAGCACATaGAACGGCTCTGGCTTGATGGCAGCCCTAGGAAGG +
Preference number: 6 (lower is better)
Translates to: SNSRELHRTAST*NGSGLMAALGR
Trigger: CCTTCCTAGGGCTGCCATCAAGCCAGAGCCGTTCCATGTGCTAGCTGTCCTGTGGAGTTCTCTAGAATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp AAGCGGACGTGGAAAGGGGAGCATTGGAGGTTTCCATaGGGCTGGCGGATGACAATGATGTCAATGCACCCT +
Preference number: 6 (lower is better)
Translates to: KRTWKGEHWRFP*GWRMTMMSMHP
Trigger: AGGGTGCATTGACATCATTGTCATCCGCCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCACGTCCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS CAA 72 bp GGTTGGCTGACCGGGCTCCGTTGTCGCTTGCATGTTTaGCGAGTCCGGAAGGATCTCCGTTTTTGGGAAAAT +
Preference number: 6 (lower is better)
Translates to: GWLTGLRCRLHV*RVRKDLRFWEN
Trigger: ATTTTCCCAAAAACGGAGATCCTTCCGGACTCGCAAAACATGCAAGCGACAACGGAGCCCGGTCAGCCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 72 bp AGGACCAGGCCGGTGGCCATCTGCCACTGGAGCACCTaGGCCTTCCAAGAGGACATATCAACTATGAGATTT +
Preference number: 6 (lower is better)
Translates to: RTRPVAICHWST*AFQEDISTMRF
Trigger: AAATCTCATAGTTGATATGTCCTCTTGGAAGGCCAAGGTGCTCCAGTGGCAGATGGCCACCGGCCTGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS TCA 72 bp GAAAATACAGGGCCGCCACTTCAGGATCCATGTCTGTaGGGTCATCCAAGTAGACGCCGTCAGCACCAAGAT +
Preference number: 6 (lower is better)
Translates to: ENTGPPLQDPCL*GHPSRRRQHQD
Trigger: ATCTTGGTGCTGACGGCGTCTACTTGGATGACCTCACAGACATGGATCCTGAAGTGGCGGCCCTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000460096.1
ENST00000674199.1
CDS GCA 72 bp AGCTCTCCCCACAGCCAAAGCATTTCTGGGTTCTTCTaGCCTGTCCTTTCCGTGGACTTGCTGACCAATTCT +
Preference number: 6 (lower is better)
Translates to: SSPHSQSISGFF*PVLSVDLLTNS
Trigger: AGAATTGGTCAGCAAGTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCTGTGGGGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 72 bp TCTTTCATCTTGTGTGGAGAAGAAGACTTAGCAGCCTaGGGCAGCTCTCCCCACAGCCAAAGCATTTCTGGG +
Preference number: 6 (lower is better)
Translates to: SFILCGEEDLAA*GSSPHSQSISG
Trigger: CCCAGAAATGCTTTGGCTGTGGGGAGAGCTGCCGCAGGCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS GCA 72 bp CAACCCTTCTCCAAAGGTCTCGTGCACAAACACAGATaGGCTTTCTGCCGACCGTCACTGAGGGAATTCAGA +
Preference number: 6 (lower is better)
Translates to: QPFSKGLVHKHR*AFCRPSLREFR
Trigger: TCTGAATTCCCTCAGTGACGGTCGGCAGAAAGCGCATCTGTGTTTGTGCACGAGACCTTTGGAGAAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS CCA 72 bp ACGTGGAAAGGGGAGCATTGGAGGTTTCCATTGGGCTaGCGGATGACAATGATGTCAATGCACCCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: TWKGEHWRFPLG*RMTMMSMHPES
Trigger: ACTCTCAGGGTGCATTGACATCATTGTCATCCGCCAGCCCAATGGAAACCTCCAATGCTCCCCTTTCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp TCTACTGCTCAATGGGCTGGACTCTTTCATCTTGTGTaGAGAAGAAGACTTAGCAGCCTGCGGCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: STAQWAGLFHLV*RRRLSSLRQLS
Trigger: GGAGAGCTGCCGCAGGCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 72 bp CCTTGGTACTGCGTGGTGACACTGAAAACCACGTCGTaGGGGCCATTCTTCAACTTCAAGAAGCTGCTCGGA +
Preference number: 6 (lower is better)
Translates to: PWYCVVTLKTTS*GPFFNFKKLLG
Trigger: TCCGAGCAGCTTCTTGAAGTTGAAGAATGGCCCCAACGACGTGGTTTTCAGTGTCACCACGCAGTACCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396099.5
CDS GCA 72 bp TCCAAAGGTCTCGTGCACAAACACAGATGCGCTTTCTaGCGACCGTCACTGAGGGAATTCAGACAGACCAAA +
Preference number: 6 (lower is better)
Translates to: SKGLVHKHRCAF*RPSLREFRQTK
Trigger: TTTGGTCTGTCTGAATTCCCTCAGTGACGGTCGGCAGAAAGCGCATCTGTGTTTGTGCACGAGACCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS GCA 72 bp CTAAGTGATCACCATCCTGTGCTGAGGGCTTGTTTTTaGCAACTGCACCACACGCATATCCACCCACTACCT +
Preference number: 6 (lower is better)
Translates to: LSDHHPVLRACF*QLHHTHIHPLP
Trigger: AGGTAGTGGGTGGATATGCGTGTGGTGCAGTTGGCAAAAACAAGCCCTCAGCACAGGATGGTGATCACTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS TCA 72 bp GAGGTTTCTAGTTGTCTTCTGTTAAGCAGGTGGCCTTaGATTCTGGCAGCTCACGCTTCAGAGTTACCTGGG +
Preference number: 6 (lower is better)
Translates to: EVSSCLLLSRWP*ILAAHASELPG
Trigger: CCCAGGTAACTCTGAAGCGTGAGCTGCCAGAATTCAAGGCCACCTGCTTAACAGAAGACAACTAGAAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396097.5
ENST00000425416.6
CDS TCA 72 bp CAAAACAGAACCACACGTTCACAGATACTTGCTTTATaGCCACAATGGCATCTCGGAGCAGCAAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: QNRTTRSQILAL*PQWHLGAARAG
Trigger: CCCTGCCCTTGCTGCTCCGAGATGCCATTGTGGTCATAAAGCAAGTATCTGTGAACGTGTGGTTCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS GCA 72 bp CAGCTTCCATTAACTTCAGATAAAGGCCCCTGCTCATaGGAACCTGGGTCTCCTGGTGGATTCTCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: QLPLTSDKGPCS*EPGSPGGFSFF
Trigger: GAAAAAGGAGAATCCACCAGGAGACCCAGGTTCGCATGAGCAGGGGCCTTTATCTGAAGTTAATGGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396098.5
ENST00000396099.5
ENST00000464517.5
ENST00000480315.1
ENST00000495907.5
CDS CAA 90 bp CTCATCTCGATGGGGAACATGTCCTCATCCTCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTGTCCAGCTGTGACTTTCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LISMGNMSSSSDVFM*SSLFRLSSCDFLLL
Trigger: AAGGAGGAGAAAGTCACAGCTGGACAGCCTGAAGAGAGATGACAACATGAACACATCTGAGGATGAGGACATGTTCCCCATCGAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS TCA 72 bp GGGTCATCGATAATAGCGGGGTTGTCCACAAACTGTTaGTATGACACAGCTTGCTCCAGGAATGCATCTGTG +
Preference number: 6 (lower is better)
Translates to: GSSIIAGLSTNC*YDTACSRNASV
Trigger: CACAGATGCATTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAACCCCGCTATTATCGATGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS TCA 72 bp GAAAAGACATTCGCAGCACTCCTGACAAAGGCTAAGTaGTCACCATCCTGTGCTGAGGGCTTGTTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: EKTFAALLTKAK*SPSCAEGLFLP
Trigger: TGGCAAAAACAAGCCCTCAGCACAGGATGGTGATCACTTAGCCTTTGTCAGGAGTGCTGCGAATGTCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CCA 72 bp CTGCAGCAATTCCCAACTCCAGAGTTCCTAACATTCTaGTCCCTTCATAAAAGCCACGAGCCACAAAACCCA +
Preference number: 6 (lower is better)
Translates to: LQQFPTPEFLTF*SLHKSHEPQNP
Trigger: TGGGTTTTGTGGCTCGTGGCTTTTATGAAGGGACCAGAATGTTAGGAACTCTGGAGTTGGGAATTGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404113.6
CDS CCA 72 bp CCAACACTTGCTAAGTGTGAGCACTGCTTTGTCTTCTaGGCTTACCTCCTTGATTGTGGTGTTTCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: PTLAKCEHCFVF*AYLLDCGVSSP
Trigger: AGGGGAAGAAACACCACAATCAAGGAGGTAAGCCCAGAAGACAAAGCAGTGCTCACACTTAGCAAGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS CAA 72 bp ATTTTTCTACTGCTCAATGGGCTGGACTCTTTCATCTaGTGTGGAGAAGAAGACTTAGCAGCCTGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: IFLLLNGLDSFI*CGEEDLAACGS
Trigger: GCTGCCGCAGGCTGCTAAGTCTTCTTCTCCACACAAGATGAAAGAGTCCAGCCCATTGAGCAGTAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 72 bp TCAGAGGAAAGTCTCATCTCCCCATCAGAAGGCACATaGTCAGGACCTGGCTCAGCTTCCATTAACTTCAGA +
Preference number: 6 (lower is better)
Translates to: SEESLISPSEGT*SGPGSASINFR
Trigger: TCTGAAGTTAATGGAAGCTGAGCCAGGTCCTGACAATGTGCCTTCTGATGGGGAGATGAGACTTTCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396098.5
ENST00000396099.5
ENST00000464517.5
ENST00000480315.1
ENST00000495907.5
CDS CAA 90 bp AGCCAAAGCATTTCTGGGTTCTTCTGCCCTGTCCTTTCCGTGGACTaGCTGACCAATTCTGAATCACTTTTAGGTGTTGAAGGTCGGGAA +
Preference number: 6 (lower is better)
Translates to: SQSISGFFCPVLSVD*LTNSESLLGVEGRE
Trigger: TTCCCGACCTTCAACACCTAAAAGTGATTCAGAATTGGTCAGCAAGTCCACGGAAAGGACAGGGCAGAAGAACCCAGAAATGCTTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS TCA 72 bp GGGTCATCGATAATAGCGGGGTTGTCCACAAACTGTTaGTATGACACAGCTTGCTCCAGGAATGCATCTTTC +
Preference number: 6 (lower is better)
Translates to: GSSIIAGLSTNC*YDTACSRNASF
Trigger: GAAAGATGCATTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAACCCCGCTATTATCGATGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS TCA 72 bp ATCGATAATAGCGGGGTTGTCCACAAACTGTTGATATaGCACAGCTTGCTCCAGGAATGCATCTGTGACAGC +
Preference number: 6 (lower is better)
Translates to: IDNSGVVHKLLI*HSLLQECICDS
Trigger: GCTGTCACAGATGCATTCCTGGAGCAAGCTGTGTCATATCAACAGTTTGTGGACAACCCCGCTATTATCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS GCA 72 bp TTTCTGGAAGGCCTGCATTGCCAGGAGGAGGGGTGCTaGTGTTGTCCAGTTATAATATTTACTCCCAATCTT +
Preference number: 6 (lower is better)
Translates to: FLEGLHCQEEGC*CCPVIIFTPNL
Trigger: AAGATTGGGAGTAAATATTATAACTGGACAACAGCAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396099.5
ENST00000404113.6
ENST00000425416.6
ENST00000449576.6
ENST00000454151.2
ENST00000464953.2
ENST00000674199.1
CDS GCA 72 bp AAAGCCCCAAAACAGAACCACACGTTCACAGATACTTaGTTTATGACCACAATGGCATCTCGGAGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: KAPKQNHTFTDT*FMTTMASRSSK
Trigger: CTTGCTGCTCCGAGATGCCATTGTGGTCATAAAGCAAGTATCTGTGAACGTGTGGTTCTGTTTTGGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp ATGGGGAACATGTCCTCATCCTCAGATGTGTTCATGTaGTCATCTCTCTTCAGGCTGTCCAGCTGTGACTTT +
Preference number: 6 (lower is better)
Translates to: MGNMSSSSDVFM*SSLFRLSSCDF
Trigger: AAAGTCACAGCTGGACAGCCTGAAGAGAGATGACAACATGAACACATCTGAGGATGAGGACATGTTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 90 bp AGGGTAAATCACAGCCAGGGAGAGGTTTTCCTCAGGAATATCATCTaGGAATGGAGGTATATCATTAGGAAGAGTTCTGCTGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: RVNHSQGEVFLRNII*EWRYIIRKSSAALQ
Trigger: CTGGAGAGCAGCAGAACTCTTCCTAATGATATACCTCCATTCCAAGATGATATTCCTGAGGAAAACCTCTCCCTGGCTGTGATTTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CAA 90 bp AACTTAAGCATGAAGACTTTGGCAAAGGTTTCTGGAAGGCCTGCATaGCCAGGAGGAGGGGTGCTGCTGTTGTCCAGTTATAATATTTAC +
Preference number: 6 (lower is better)
Translates to: NLSMKTLAKVSGRPA*PGGGVLLLSSYNIY
Trigger: GTAAATATTATAACTGGACAACAGCAGCACCCCTCCTCCTGGCAATGCAGGCCTTCCAGAAACCTTTGCCAAAGTCTTCATGCTTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454151.2
CDS CAA 90 bp AATCTCACTACACAAAACCAACACTTGCTAAGTGTGAGCACTGCTTaGTCTTCTGGGCTTACCTCCTTGATTGTGGTGTTTCTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: NLTTQNQHLLSVSTA*SSGLTSLIVVFLPL
Trigger: GAGGGGAAGAAACACCACAATCAAGGAGGTAAGCCCAGAAGACAAAGCAGTGCTCACACTTAGCAAGTGTTGGTTTTGTGTAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS CCA 72 bp TCTGAAGAATGGCTTCTTTTCAGCAACGGGAAAACGTaGTCGACTACTTCACAGAGTCTCACATACAGACAC +
Preference number: 6 (lower is better)
Translates to: SEEWLLFSNGKT*STTSQSLTYRH
Trigger: GTGTCTGTATGTGAGACTCTGTGAAGTAGTCGACCACGTTTTCCCGTTGCTGAAAAGAAGCCATTCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487576.1
CDS CAA 90 bp ATTCCCCTATACTTCGCCCCTTGTTTCTTGGTATTGAATTCAAATTaGGAGTTGCTGGGATTCACTTTCACTCTGGACTCCACTGCTACC +
Preference number: 6 (lower is better)
Translates to: IPLYFAPCFLVLNSN*ELLGFTFTLDSTAT
Trigger: GGTAGCAGTGGAGTCCAGAGTGAAAGTGAATCCCAGCAACTCCAAATTTGAATTCAATACCAAGAAACAAGGGGCGAAGTATAGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS CCA 72 bp ACAGCCAGGGAGAGGTTTTCCTCAGGAATATCATCTTaGAATGGAGGTATATCATTAGGAAGAGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: TARERFSSGISS*NGGISLGRVLL
Trigger: CAGCAGAACTCTTCCTAATGATATACCTCCATTCCAAGATGATATTCCTGAGGAAAACCTCTCCCTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS CCA 72 bp TGTCAGGCAGCTGAGACATCCCAGAAAAGCACGAGATaGAAAGTAAACCCGTACTTTCAAGTCTTTCTACAA +
Preference number: 6 (lower is better)
Translates to: CQAAETSQKSTR*KVNPYFQVFLQ
Trigger: TTGTAGAAAGACTTGAAAGTACGGGTTTACTTTCCATCTCGTGCTTTTCTGGGATGTCTCAGCTGCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp TCTCCCAATTTCATATGCAAATCCACAGATTCCCCATaGATTTCTATGTCAACCACTTTCTCTCGGGAGCGC +
Preference number: 6 (lower is better)
Translates to: SPNFICKSTDSP*ISMSTTFSRER
Trigger: GCGCTCCCGAGAGAAAGTGGTTGACATAGAAATCAATGGGGAATCTGTGGATTTGCATATGAAATTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000441684.5
ENST00000449576.6
ENST00000674199.1
CDS CAA 72 bp CACAGCCAGGGAGAGGTTTTCCTCAGGAATATCATCTaGGAATGGAGGTATATCATTAGGAAGAGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: HSQGEVFLRNII*EWRYIIRKSSA
Trigger: AGCAGAACTCTTCCTAATGATATACCTCCATTCCAAGATGATATTCCTGAGGAAAACCTCTCCCTGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256720.6
ENST00000396097.5
ENST00000396098.5
ENST00000396099.5
ENST00000425416.6
ENST00000449576.6
ENST00000674199.1
CDS TCA 72 bp CAGCGGATAAACAATGAGCCACATAACGTCTGGTGGTaGAATGATTTCCATCAATGGGAGGGTGTCATATTT +
Preference number: 6 (lower is better)
Translates to: QRINNEPHNVWW*NDFHQWEGVIF
Trigger: AAATATGACACCCTCCCATTGATGGAAATCATTTCACCACCAGACGTTATGTGGCTCATTGTTTATCCGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464517.5
CDS CAA 72 bp TTAGTGTTAGGATGTCGGAGTAACGATGTGGACTTTTaGCTTGGCCTAGCAAAGCCTTACTACTTAACACAG +
Preference number: 6 (lower is better)
Translates to: LVLGCRSNDVDF*LGLAKPYYLTQ
Trigger: CTGTGTTAAGTAGTAAGGCTTTGCTAGGCCAAGCAAAAAGTCCACATCGTTACTCCGACATCCTAACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp TACATGAAAACCAATCTCACTACACAAAACCAACACTaGCTAAGTGTGAGCACTGCTTTGTCTTCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: YMKTNLTTQNQH*LSVSTALSSGL
Trigger: AAGCCCAGAAGACAAAGCAGTGCTCACACTTAGCAAGTGTTGGTTTTGTGTAGTGAGATTGGTTTTCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS CAA 90 bp ACCATCTGTGTTCTCCTAGTAATCAATTCCCCTATACTTCGCCCCTaGTTTCTTGGTATTGAATTCAAATTTGGAGTTGCTGGGATTCAC +
Preference number: 6 (lower is better)
Translates to: TICVLLVINSPILRP*FLGIEFKFGVAGIH
Trigger: GTGAATCCCAGCAACTCCAAATTTGAATTCAATACCAAGAAACAAGGGGCGAAGTATAGGGGAATTGATTACTAGGAGAACACAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS TCA 72 bp ATGATTTCCATCAATGGGAGGGTGTCATATTTGAACTaGAACTTCTGCTCATGGATGAGGTTTCTAGTTGTC +
Preference number: 6 (lower is better)
Translates to: MISINGRVSYLN*NFCSWMRFLVV
Trigger: GACAACTAGAAACCTCATCCATGAGCAGAAGTTTCAGTTCAAATATGACACCCTCCCATTGATGGAAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464517.5
CDS CAA 72 bp TCAATTCCCCTATACTTCGCCCCTTGTTTCTTGGTATaGAATTCAAATTTGGAGTTGCTGGGATTCACTTTC +
Preference number: 6 (lower is better)
Translates to: SIPLYFAPCFLV*NSNLELLGFTF
Trigger: GAAAGTGAATCCCAGCAACTCCAAATTTGAATTCAATACCAAGAAACAAGGGGCGAAGTATAGGGGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS TCA 72 bp ACTAGGGCCTATCTTCATTTCTCTGATGTAAGTACATaGAAACCAATCTCACTACACAAAACCAACACTTGC +
Preference number: 6 (lower is better)
Translates to: TRAYLHFSDVST*KPISLHKTNTC
Trigger: GCAAGTGTTGGTTTTGTGTAGTGAGATTGGTTTTCATGTACTTACATCAGAGAAATGAAGATAGGCCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464953.2
CDS GCA 72 bp GAAATAAGGGTGGTCTGTATCATCATGGCAATTCACTaGTGTATTGCCTGTCCTATCAAATGCAATAATGTA +
Preference number: 6 (lower is better)
Translates to: EIRVVCIIMAIH*CIACPIKCNNV
Trigger: TACATTATTGCATTTGATAGGACAGGCAATACAGCAGTGAATTGCCATGATGATACAGACCACCCTTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp GTTCTCCTAGTAATCAATTCCCCTATACTTCGCCCCTaGTTTCTTGGTATTGAATTCAAATTTGGAGTTGCT +
Preference number: 6 (lower is better)
Translates to: VLLVINSPILRP*FLGIEFKFGVA
Trigger: AGCAACTCCAAATTTGAATTCAATACCAAGAAACAAGGGGCGAAGTATAGGGGAATTGATTACTAGGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487346.1
CDS CAA 90 bp ATTCACTGCAATTTCAATCAAACTCATAACAGAGTCTTGGGTGTTTaGATGAAATTTGAGTCTAGAAGCTACGAAAACGAGCAGAAAGCC +
Preference number: 6 (lower is better)
Translates to: IHCNFNQTHNRVLGV*MKFESRSYENEQKA
Trigger: GGCTTTCTGCTCGTTTTCGTAGCTTCTAGACTCAAATTTCATCAAAACACCCAAGACTCTGTTATGAGTTTGATTGAAATTGCAGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 90 bp GCTCTACAGATTCACTGCAATTTCAATCAAACTCATAACAGAGTCTaGGGTGTTTTGATGAAATTTGAGTCTAGAAGCTACGAAAACGAG +
Preference number: 6 (lower is better)
Translates to: ALQIHCNFNQTHNRV*GVLMKFESRSYENE
Trigger: CTCGTTTTCGTAGCTTCTAGACTCAAATTTCATCAAAACACCCAAGACTCTGTTATGAGTTTGATTGAAATTGCAGTGAATCTGTAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp AATTTCAATCAAACTCATAACAGAGTCTTGGGTGTTTaGATGAAATTTGAGTCTAGAAGCTACGAAAACGAG +
Preference number: 6 (lower is better)
Translates to: NFNQTHNRVLGV*MKFESRSYENE
Trigger: CTCGTTTTCGTAGCTTCTAGACTCAAATTTCATCAAAACACCCAAGACTCTGTTATGAGTTTGATTGAAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475922.1
CDS CAA 72 bp ATTCACTGCAATTTCAATCAAACTCATAACAGAGTCTaGGGTGTTTTGATGAAATTTGAGTCTAGAAGCTAC +
Preference number: 6 (lower is better)
Translates to: IHCNFNQTHNRV*GVLMKFESRSY
Trigger: GTAGCTTCTAGACTCAAATTTCATCAAAACACCCAAGACTCTGTTATGAGTTTGATTGAAATTGCAGTGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475922.1