RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LOXHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167210

Ensembl transcript IDs: ENST00000300591.11, ENST00000335730.6, ENST00000398686.8, ENST00000398705.7, ENST00000414184.1, ENST00000419859.1, ENST00000441551.6, ENST00000452425.2, ENST00000536111.1, ENST00000536736.5, ENST00000579038.6, ENST00000582408.6, ENST00000642948.1

Found 1454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTaGAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCT +
Preference number: 1 (lower is better)
Translates to: YTILMASASPLLSPG*RLNFSSTLCSKSQP
Trigger: AGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR CCA 90 bp CATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCT +
Preference number: 1 (lower is better)
Translates to: HMEPVLEWSFCHPQR*QATDRMGKSRSLHP
Trigger: AGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR CCA 90 bp AATGGTCTTTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGCACCCTGATGTCAGGATTTCAAGAC +
Preference number: 1 (lower is better)
Translates to: NGLFVILRGGKPPIA*ESQGLCTLMSGFQD
Trigger: GTCTTGAAATCCTGACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR CCA 90 bp AAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTaGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCA +
Preference number: 1 (lower is better)
Translates to: KIHHLDGLCFSTSIP*VKTQFLIHTLQQVP
Trigger: TGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR TCA 90 bp CCTTGTAGACTTGCCGTAAGGACCCATCTTTCATGTATTTCTCAGTaGAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCAT +
Preference number: 1 (lower is better)
Translates to: PCRLAVRTHLSCISQ*RCHMEPVLEWSFCH
Trigger: ATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAAATACATGAAAGATGGGTCCTTACGGCAAGTCTACAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGATTGGGGCATCTCAGTaGGAGGGTGGGGGCCCTAGC +
Preference number: 2 (lower is better)
Translates to: APSANARGFEGLLTAKVEIGASQ*EGGGPS
Trigger: GCTAGGGCCCCCACCCTCTCACTGAGATGCCCCAAT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
3UTR-3UTR CCA 90 bp ACAGCACAATGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATG +
Preference number: 2 (lower is better)
Translates to: TAQCPEALLLPCRLAVRTCHPQR*QATDRM
Trigger: CATGCGATCGGTGGCTTGCCACCTCTGAGGATGACA...GGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACATTGTGCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR-3UTR CCA 90 bp ACAGCACAATGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: TAQCPEALLLPCRLAVRTKPPIA*ESQGLC
Trigger: GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTT...GGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACATTGTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR CAA 90 bp TTCTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: FSVKMSYGTSSRMVF*SSSEVASHRSHGKV
Trigger: GACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCATCTTGATGGCCTCTaGTTCTCCACTTCTATCCCC +
Preference number: 2 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASHLDGL*FSTSIP
Trigger: GGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
3UTR-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCATCTTGATGGCCTCTaGTTCTCCACTTCTATCCCC +
Preference number: 2 (lower is better)
Translates to: LATGFIETGEKYTLLSKQHLDGL*FSTSIP
Trigger: GGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
3UTR-3UTR TCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCTTCTATCCCCTGGGTaGAGACTCAATTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLLSPG*RLNFSS
Trigger: GGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR-3UTR TCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCTTCTATCCCCTGGGTaGAGACTCAATTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCLLSPG*RLNFSS
Trigger: GGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATTCTCATCCACACTCTaGAGCAAGTCCCAGCCTGGT +
Preference number: 2 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRFSSTL*SKSQPG
Trigger: ACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR-3UTR GCA 90 bp CCATCTTTCATGTATTTCTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGAAAGTCAAGGTCTCTaGACCCTGATGTCAGGATTT +
Preference number: 2 (lower is better)
Translates to: PSFMYFSVKMSYGTSSRMESQGL*TLMSGF
Trigger: AAATCCTGACATCAGGGTGCAGAGACCTTGACTTTC...CATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAAATACATGAAAGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATCCACTTCTATCCCCTaGGTGAAGACTCAATTTCTC +
Preference number: 2 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRSTSIP*VKTQFL
Trigger: GAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGGCAGAAATGTGAGATaGGGGCATCTCAGTGAGAGG +
Preference number: 3 (lower is better)
Translates to: GPHEVLSGLLAPSANARGGRNVR*GHLSER
Trigger: CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
3UTR GCA 72 bp GGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTaGACCCTGATGTCAGGATTTCAAGACCAGCTTGGC +
Preference number: 3 (lower is better)
Translates to: GKPPIAWESQGL*TLMSGFQDQLG
Trigger: GCCAAGCTGGTCTTGAAATCCTGACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR CCA 72 bp TTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGCACCCTGATGTCAGGA +
Preference number: 3 (lower is better)
Translates to: FVILRGGKPPIA*ESQGLCTLMSG
Trigger: TCCTGACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR CCA 72 bp CCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCT +
Preference number: 3 (lower is better)
Translates to: PVLEWSFCHPQR*QATDRMGKSRS
Trigger: AGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
3UTR TCA 72 bp TTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTaGAGACTCAATTTCTCATCCACACTCTGCAGCAAG +
Preference number: 3 (lower is better)
Translates to: LMASASPLLSPG*RLNFSSTLCSK
Trigger: CTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR CCA 72 bp CATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTaGGTGAAGACTCAATTTCTCATCCACACTCTGCAG +
Preference number: 3 (lower is better)
Translates to: HLDGLCFSTSIP*VKTQFLIHTLQ
Trigger: CTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
3UTR-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTTAAAATACACCATCTaGATGGCCTCTGCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLKYTI*MASASP
Trigger: TGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCCTCCTCCTCCGGCGTaGGGTCCACCTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGPPPPA*GPPPAP
Trigger: TGGTGCGGGAGGTGGACCTCACGCCGGAGGAGGAGG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCACCGGGCCATGCCCATaGTCCTGCGCACTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGTGPCP*SCALLG
Trigger: GCCCAACAGTGCGCAGGATCATGGGCATGGCCCGGT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGACCGGGCCATGCCCATaGTCCTGCGCACTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVETGPCP*SCALLG
Trigger: GCCCAACAGTGCGCAGGATCATGGGCATGGCCCGGT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCTCCTCCTCCGGCGTaGGGTCCACCTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPPPPA*GPPPAP
Trigger: TGGTGCGGGAGGTGGACCTCACGCCGGAGGAGGAGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCTGAGACCTCCTCCCTaGGCTCTGGCGCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALRPPP*ALAPTA
Trigger: GGCCGTGGGCGCCAGAGCTCAGGGAGGAGGTCTCAG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGCTCCAGGCGCACCTTaGGCAGCTCACCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEAPGAP*AAHPAP
Trigger: TGGAGCTGGGTGAGCTGCGCAAGGTGCGCCTGGAGC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCACAGAGCCACGGCTaGAGCCCCTCTTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPQSHG*SPSSLG
Trigger: CCCGAGGGAAGAGGGGCTTCAGCCGTGGCTCTGTGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVESCPPG*ARRSPW
Trigger: CCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCAGGGTCTCGAGGGTaGACTCATCCACCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSGSRG*THPPGH
Trigger: GTGGCCGGGTGGATGAGTTCACCCTCGAGACCCTGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGCTTTGAAGGGCTGCTaGCCGCCAAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGALKGC*PPRWRA
Trigger: TGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGTCAGCAGGGCTGCTaGAGTTGCTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVESQQGC*SCCCGP
Trigger: GGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGACCACTCCGGCCGACTaGCCAGGCCATCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVETTPAD*PGHQSG
Trigger: TCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCCAGGTACCAGCCGCTaGCGGAGCCTTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGPGTSR*RSLCHR
Trigger: ACGATGGCAAAGGCTCCGGCAGCGGCTGGTACCTGG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCGCCTCCTCACACCTaGGGGAACCTGAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEPPPHT*GNLRPP
Trigger: AGGAGGTCTCAGGTTCCCGCAGGTGTGAGGAGGCGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGGTCAGCTGGCCCATaGGCTCTAGGTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGSAGP*ALGAGA
Trigger: GGCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGCCCGGTCACTGTGCTaGTGTCGACATCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGARSLC*CRHRPS
Trigger: AGATGGCCGATGTCGACATCAGCACAGTGACCGGGC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCCACAGAGCCACGGCTaGAGCCCCTCTTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVPQSHG*SPSSLG
Trigger: CCCGAGGGAAGAGGGGCTTCAGCCGTGGCTCTGTGG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVERSGLC*PARRGC
Trigger: GCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGGRSGL*CPARRG
Trigger: ACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCTGAGCAGTAGCCACTaGTGTCGTGCTCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLSSSH*CRAPGA
Trigger: TGCGCCTGGAGCACGACAGCAGTGGCTACTGCTCAG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTGGGTGGGCCAGAGTaGCCCGTTTTCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVELGGPE*PVFLAS
Trigger: GGAAGCCAAGAAAACGGGGCACTCTGGCCCACCCAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVETGTRL*TLLAKL
Trigger: GAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGTCCACGAACCAGCTaGGCCCAAAGCCCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANACPRTS*AQSPRP
Trigger: CGGGCGAGGGCTTTGGGCCCAGCTGGTTCGTGGACA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCGGGCCAGCCAGCGGTaGGCTTCGAACTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRASQR*ASNLCC
Trigger: GCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
3UTR CAA 72 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATaGGGGCATCTCAGTGAGAGGGTGGGGGCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVR*GHLSERVGALA
Trigger: GGCTAGGGCCCCCACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALRMST*EQCHPG
Trigger: TCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGLRMST*EQCHPG
Trigger: TCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCCACAGAGCCACGGCTaGAGCCCCTCTTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFPQSHG*SPSSLG
Trigger: CCCGAGGGAAGAGGGGCTTCAGCCGTGGCTCTGTGG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASCPPG*ARRSPW
Trigger: CCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCGGGGCACACGGATCTaGACGCTGCCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERGTRI*TLPRNQ
Trigger: CTGGTTCCTGGGCAGCGTTCAGATCCGTGTGCCCCG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCGGGGCACACGGATCTaGACGCTGCCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERRGTRI*TLPRNQ
Trigger: CTGGTTCCTGGGCAGCGTTCAGATCCGTGTGCCCCG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCATTGGGGCATCTCAGTaGGAGGGTGGGGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGIGASQ*EGGGPS
Trigger: GCTAGGGCCCCCACCCTCTCACTGAGATGCCCCAAT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGCTTTGAAGGGCTGCTaGCCGCCAAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGALKGC*PPRWRA
Trigger: TGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCTTTGAAGGGCTGCTaGCCGCCAAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAALKGC*PPRWRA
Trigger: TGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCATCCCCCGTGGCTGTaGCCACTTCATACACTCTGG +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGHPPWL*PLHTLW
Trigger: CCAGAGTGTATGAAGTGGTCACAGCCACGGGGGATG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCATCCCCCGTGGCTGTaGCCACTTCATACACTCTGG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEHPPWL*PLHTLW
Trigger: CCAGAGTGTATGAAGTGGTCACAGCCACGGGGGATG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCCATGGGCTCTAGGTaGTGGGGCCCTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPMGSR*WGPACN
Trigger: ATTGCAGGCAGGGCCCCAGCACCTAGAGCCCATGGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVETSLGP*LCCHGQ
Trigger: TTGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACAGGGCTGCTGCAGTTaGTGCTGCGGTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRQGCCS*CCGPQC
Trigger: ACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGAAGTCAGCAGGGCTaGTGCAGTTGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVERSQQG*CSCCCG
Trigger: ACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAAGTCAGCAGGGCTaGTGCAGTTGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGRSQQG*CSCCCG
Trigger: ACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATGTTGGAGTCAGTaGCCCCGCCAACCACATCCC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGRCWSQ*PRQPHP
Trigger: GGGATGTGGTTGGCGGGGGCACTGACTCCAACATCT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGATGTTGGAGTCAGTaGCCCCGCCAACCACATCCC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVERCWSQ*PRQPHP
Trigger: GGGATGTGGTTGGCGGGGGCACTGACTCCAACATCT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCACCACTCCGGCCGACTaGCCAGGCCATCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGTTPAD*PGHQSG
Trigger: TCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGTTGGCATCAGTGCCTaGTCCCAGGATGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEVGISA*SQDVAG
Trigger: ACCAGCGACATCCTGGGAGCAGGCACTGATGCCAAC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCAGGCTCTGGACCTTaGTGGCAAAGCTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEPGSGP*WQSSLS
Trigger: CGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGTTGGCATCAGTGCCTaGCCCTGGCTCATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEVGISA*PWLIAC
Trigger: ACAGGCTATGAGCCAGGGGCAGGCACTGATGCCAAC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACGTTGGCATCAGTaGCTGCCCCTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGRRWHQ*LPLAHS
Trigger: GCTATGAGCCAGGGGCAGGCACTGATGCCAACGTCT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGCTTCAGCTCCCGCTTaGCTGTGTCTCCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGASAPA*LCLRWP
Trigger: GGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCTTCAGCTCCCGCTTaGCTGTGTCTCCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRASAPA*LCLRWP
Trigger: GGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTGTGGAAGATGTCCGTaGGGCCTCGGTCAAACACGC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVECGRCP*GLGQTR
Trigger: GCGTGTTTGACCGAGGCCGCACGGACATCTTCCACA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCACGGATCTGAACGCTaGCCAGGAACCAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGHGSER*PGTSWH
Trigger: ATGCCAGCTGGTTCCTGGGCAGCGTTCAGATCCGTG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAAGACTCGGGCACTGGTaGCTGCGCCACCCACATCTC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRRLGHW*LRHPHL
Trigger: GAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGACTCGGGCACTGGTaGCTGCGCCACCCACATCTC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARLGHW*LRHPHL
Trigger: GAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCCCGCACCACCAGGTaGCGCAGCCACACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSRTTR*RSHTVS
Trigger: GGACACCGTGTGGCTGCGGCACCTGGTGGTGCGGGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTGCTCAATCACCTCCTaGATCCCCGGCCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVECSITS*IPGPNS
Trigger: GGAGTTTGGGCCGGGGATGCAGGAGGTGATTGAGCA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGCTCCAGGCGCACCTTaGGCAGCTCACCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEAPGAP*AAHPAP
Trigger: TGGAGCTGGGTGAGCTGCGCAAGGTGCGCCTGGAGC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCTCGCAGGCTCACTGTaGCGCCTCCTCACACCTGCG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELAGSL*RLLTPA
Trigger: CGCAGGTGTGAGGAGGCGGCACAGTGAGCCTGCGAG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGATGGGCTCTAGGTGCTaGGGCCCTGCCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEMGSRC*GPACNS
Trigger: AGAATTGCAGGCAGGGCCCCAGCACCTAGAGCCCAT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAAGGCTCGGCTGTCAGTaGCCGCGTCCTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRRLGCQ*PRPCAS
Trigger: GGAAGCACAAGGACGCGGCCACTGACAGCCGAGCCT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCAGTCACACTGGAAGTaGAAGGTCTCGTCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEQSHWK*KVSSRE
Trigger: CTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCCAGACGTTCTCCCTaGTTTCGCCTCCGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRARRSP*FRLRCP
Trigger: CGGGCAACGGAGGCGAAACCAGGGAGAACGTCTGGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGACAGCCAGCTCGATGTaGAAGATGTCCGTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVETASSM*KMSVRP
Trigger: AGGCCGCACGGACATCTTCCACATCGAGCTGGCTGT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTGTCCACGAACCAGCTaGGCCCAAAGCCCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSECPRTS*AQSPRP
Trigger: CGGGCGAGGGCTTTGGGCCCAGCTGGTTCGTGGACA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCGGGCCAGCCAGCGGTaGGCTTCGAACTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERRASQR*ASNLCC
Trigger: GCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTCTTGCTGGTGAGCTaGAGCTTGGGAGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVELLLVS*SLGESP
Trigger: TGGGCTCTCTCCCAAGCTCCAGCTCACCAGCAAGAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGPASPP*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACGGTGGAGACGCTGG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEPASPP*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACGGTGGAGACGCTGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGTTGGTCCGGTTCTCTaGCTTGCCAAGGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEVGPVL*LAKVSL
Trigger: GAGCGATACCTTGGCAAGTCAGAGAACCGGACCAAC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCCCGGTCACTGTGCTaGTGTCGACATCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAARSLC*CRHRPS
Trigger: AGATGGCCGATGTCGACATCAGCACAGTGACCGGGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCCACAGAGCCACGGCTaGAGCCCCTCTTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVPQSHG*SPSSLG
Trigger: CCCGAGGGAAGAGGGGCTTCAGCCGTGGCTCTGTGG...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCGAAGACACGGGAGGTaGTGCCGTCGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERRHGR*CRRLCP
Trigger: AGGACAGAGGCGACGGCATCACCTCCCGTGTCTTCG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSCPPG*ARRSPW
Trigger: CCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSCPPG*ARRSPW
Trigger: CCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCTTGTCCAACCACCTaGGACATGGGAACTCCACGT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEPCPTT*DMGTPR
Trigger: ACGTGGAGTTCCCATGTCTCAGGTGGTTGGACAAGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTCAGCCGCTCCTTCTTaGGCAGCTGCCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSAAPS*AAAAAC
Trigger: ACAAGCTGCGGCAGCTGCTCAAGAAGGAGCGGCTGA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACGGTGCTGGTGTTGGTaGCCTCCACCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRRCWCW*PPPSPP
Trigger: TGGTGGAGAAGGTGGAGGTCACCAACACCAGCACCG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCGGTGCTGGTGTTGGTaGCCTCCACCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARCWCW*PPPSPP
Trigger: TGGTGGAGAAGGTGGAGGTCACCAACACCAGCACCG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGATTGGGGCATCTCAGTaGGAGGGTGGGGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEIGASQ*EGGGPS
Trigger: GCTAGGGCCCCCACCCTCTCACTGAGATGCCCCAAT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGATTGGGGCATCTCAGTaGGAGGGTGGGGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVIGASQ*EGGGPS
Trigger: GCTAGGGCCCCCACCCTCTCACTGAGATGCCCCAAT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCATGTCCATGGGGTTaGAGCTGGCCAGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRACPWG*SWPAGH
Trigger: GTGACCTGCTGGCCAGCTTCAACCCCATGGACATGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCGGGGCATCCAGGATaGACCTGTCTTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPGHPG*TCLQLP
Trigger: AGGGAGCTGAAGACAGGTTCATCCTGGATGCCCCGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACCGGGGCATCCAGGATaGACCTGTCTTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRPGHPG*TCLQLP
Trigger: AGGGAGCTGAAGACAGGTTCATCCTGGATGCCCCGG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGACACCTGCGGGAACCTaGGACCTCCTCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVTPAGT*DLLPEL
Trigger: GAGCTCAGGGAGGAGGTCTCAGGTTCCCGCAGGTGT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTATCCGGGAGGAGCCTaGGGATGTCCACGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGYPGGA*GCPRES
Trigger: GCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTCCGGTTCTCTGACTTaGCAAGGTATCGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVESGSLT*QGIAPQ
Trigger: CTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCTCCACGTACCAGTCTaGGCACCACTTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLHVPV*APLGVV
Trigger: GACAACTCCAAGTGGTGCGCAGACTGGTACGTGGAG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGCTGCTGCAGTTGCTaGTGCGGTCCCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGCCSC*CGPQCT
Trigger: AGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAGTCAGCAGGGCTGCTaGAGTTGCTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSQQGC*SCCCGP
Trigger: GGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTGGCCGCGTCCTTGTaGTTCCCAGTGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVAASL*FPVVTD
Trigger: GTCAGTCACCACTGGGAAGCACAAGGACGCGGCCAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGACCACTCCGGCCGACTaGCCAGGCCATCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSETTPAD*PGHQSG
Trigger: TCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEVAGLN*DGVGGP
Trigger: TGGACCTCCTACACCGTCGCAGTTAAGACCAGCGAC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCCAGACCCTCAGCTTaGAGAGGTGGCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAARPSA*RGGPSS
Trigger: TGAGCTTGGGCCACCTCTGCAAGCTGAGGGTCTGGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCCAGACCCTCAGCTTaGAGAGGTGGCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRARPSA*RGGPSS
Trigger: TGAGCTTGGGCCACCTCTGCAAGCTGAGGGTCTGGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGKSRTV*PSPSLL
Trigger: CAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGCTTCAGCTCCCGCTTaGCTGTGTCTCCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVASAPA*LCLRWP
Trigger: GGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRSGLC*PARRGC
Trigger: GCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRRSGLC*PARRGC
Trigger: GCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGRSGL*CPARRG
Trigger: ACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCCAGGTACCAGCCGCTaGCGGAGCCTTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEPGTSR*RSLCHR
Trigger: ACGATGGCAAAGGCTCCGGCAGCGGCTGGTACCTGG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTTCGTTGTCCTCCTTaGCCCGGGCCAGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVRCPP*PGPASG
Trigger: ACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAATTGGCATCCGTCCCTaGACCGCGAACATCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRIGIRP*TANIPR
Trigger: ACGGGGGATGTTCGCGGTGCAGGGACGGATGCCAAT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGTCTACAAACCAGCCTaGGGCCTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGVYKPA*GLACVV
Trigger: GACAACACAGGCAAGGCCCCAGGCTGGTTTGTAGAC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp TCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCCGTCGTCTTCGTTTTTaGCCAGCCAGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SSEVASHRSHGKVKVSAPRRLRF*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACG...GGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGTCTGCGCACCACTTaGAGTTGTCATGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSLRTT*SCHGGA
Trigger: AGCTCCGCCATGACAACTCCAAGTGGTGCGCAGACT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCGACATCGGCCATCTTaGAGCTCAGGGCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARHRPS*SSGRSP
Trigger: GGGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCTCGGCTGTCAGTaGCCGCGTCCTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERLGCQ*PRPCAS
Trigger: GGAAGCACAAGGACGCGGCCACTGACAGCCGAGCCT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGATGTACTTGGTGCCCTaGGTGGGCACTGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEMYLVP*VGTAKH
Trigger: GTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACAT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCGTCACCCTCACTCTTaGAGAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGRHPHS*RASSHT
Trigger: AGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCTGGACCTTGCTaGCAAAGCTCTCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEGSGPC*QSSLSS
Trigger: AGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGTGTRL*TLLAKL
Trigger: GAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGATCAGTGCCTGCCCCTaGCTCATAGCCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEISACP*LIACCH
Trigger: GTGACAACAGGCTATGAGCCAGGGGCAGGCACTGAT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTGCCTGTGTCTCCGTTaGCCCCAAAGATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVECLCLR*PQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGATAGACGTTaGCATCGGTCCCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEGRDRR*HRSQHL
Trigger: AAGGTGCTGGGACCGATGCCAACGTCTATCTCTGCC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCGGCCGCCTCAAGCTaGAATGTGTCCTTGGACGCC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASAASS*NVSLDA
Trigger: GGCGTCCAAGGACACATTCCAGCTTGAGGCGGCCGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCAGCCTGCTCTTCCTaGTGTGCCTTCACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRAACSS*CAFTKP
Trigger: GGGCTTGGTGAAGGCACACCAGGAAGAGCAGGCTGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGCCCTCTGTCTCCACTaGAGGGTGAGGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFALCLH*RVRRSL
Trigger: CAGGCTGCGCCTCACCCTCCAGTGGAGACAGAGGGC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGGTCACGGCACCACTaGCGGTCACCTTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARSRHH*RSPSTL
Trigger: CAAGGTGGAAGGTGACCGCCAGTGGTGCCGTGACCT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAGGTCACGGCACCACTaGCGGTCACCTTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRSRHH*RSPSTL
Trigger: CAAGGTGGAAGGTGACCGCCAGTGGTGCCGTGACCT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCCTATAGCTCAGGCCTaGGTGGGCCAGAGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFPIAQA*VGQSAP
Trigger: CGGGGCACTCTGGCCCACCCAGGCCTGAGCTATAGG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCTTCTAACTCTACGATaGAGCGGGAGGCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLLTLR*SGRQTS
Trigger: GGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGAAG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGTCTCCATAGATGGTaGTGTACACCTTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEGLHRW*CTPWHP
Trigger: CGGATGCCAAGGTGTACATCACCATCTATGGAGACC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWSCPPG*ARRSPW
Trigger: CCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCAGGGTCTCGAGGGTaGACTCATCCACCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSGSRG*THPPGH
Trigger: GTGGCCGGGTGGATGAGTTCACCCTCGAGACCCTGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTGGGCACATTCCCCGTaGCCACCTGAACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGWAHSP*PPEPHR
Trigger: CCTATGAGGTTCAGGTGGTCACGGGGAATGTGCCCA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCGGTGCTGGTGTTGGTaGCCTCCACCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERRCWCW*PPPSPP
Trigger: TGGTGGAGAAGGTGGAGGTCACCAACACCAGCACCG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCGGTGCTGGTGTTGGTaGCCTCCACCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERCWCW*PPPSPP
Trigger: TGGTGGAGAAGGTGGAGGTCACCAACACCAGCACCG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGTSLGP*LCCHGQ
Trigger: TTGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCACAGGGAAACGTCATaGACTTCCCAAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEHRETS*TSQEMG
Trigger: CCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGTACACAGATACTTCTaGTGGGTGCACACGGCATCG +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGVHRYF*WVHTAS
Trigger: CGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTAC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTATCCGGGAGGAGCCTaGGGATGTCCACGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEYPGGA*GCPRES
Trigger: GCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGGCTGCTGCAGTTGCTaGTGCGGTCCCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVGCCSC*CGPQCT
Trigger: AGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCAGGGCTGCTGCAGTTaGTGCTGCGGTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFQGCCS*CCGPQC
Trigger: ACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAGTCAGCAGGGCTGCTaGAGTTGCTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSQQGC*SCCCGP
Trigger: GGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAAGTCAGCAGGGCTaGTGCAGTTGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARSQQG*CSCCCG
Trigger: ACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTGGCCGCGTCCTTGTaGTTCCCAGTGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVAASL*FPVVTD
Trigger: GTCAGTCACCACTGGGAAGCACAAGGACGCGGCCAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAAHIQA*DVELLH
Trigger: GTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGAHIQA*DVELLH
Trigger: GTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGATGTTGGAGTCAGTaGCCCCGCCAACCACATCCC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARCWSQ*PRQPHP
Trigger: GGGATGTGGTTGGCGGGGGCACTGACTCCAACATCT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTTGGCATCAGTGCCTaGTCCCAGGATGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVGISA*SQDVAG
Trigger: ACCAGCGACATCCTGGGAGCAGGCACTGATGCCAAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAACACGTTGGCATCAGTaGCTGCTCCCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRTRWHQ*LLPGCR
Trigger: GCGACATCCTGGGAGCAGGCACTGATGCCAACGTGT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGCCAGACCCTCAGCTTaGAGAGGTGGCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERARPSA*RGGPSS
Trigger: TGAGCTTGGGCCACCTCTGCAAGCTGAGGGTCTGGC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVKSRTV*PSPSLL
Trigger: CAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEKSRTV*PSPSLL
Trigger: CAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCAGGCTCTGGACCTTaGTGGCAAAGCTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPGSGP*WQSSLS
Trigger: CGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCAGGCTCTGGACCTTaGTGGCAAAGCTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPGSGP*WQSSLS
Trigger: CGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVERLRIF*FSSRLP
Trigger: AGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGRLRIF*FSSRLP
Trigger: AGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVGRSGL*CPARRG
Trigger: ACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGACACCCACATTGCCATaGCCGACGGAGACCCGACTC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVTPTLP*PTETRL
Trigger: GAGTCGGGTCTCCGTCGGGCATGGCAATGTGGGTGT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGACACCCACATTGCCATaGCCGACGGAGACCCGACTC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSETPTLP*PTETRL
Trigger: GAGTCGGGTCTCCGTCGGGCATGGCAATGTGGGTGT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTACAAGGGAAGGTCTaGTGGATACCAGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVELQGKV*WIPVKG
Trigger: CCCCTTCACTGGTATCCAGCAGACCTTCCCTTGTAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCACGGATCTGAACGCTaGCCAGGAACCAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAHGSER*PGTSWH
Trigger: ATGCCAGCTGGTTCCTGGGCAGCGTTCAGATCCGTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTCTTCTTCTTCCTCTaGAGCTTGGCCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEFFFFL*SLAFSR
Trigger: GCGGCTGAAGGCCAAGCTGCAGAGGAAGAAGAAGAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGCTCAATCACCTCCTaGATCCCCGGCCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANACSITS*IPGPNS
Trigger: GGAGTTTGGGCCGGGGATGCAGGAGGTGATTGAGCA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCTGCTCTTCCTGGTGTaGCTTCACCAAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELLFLV*LHQAPT
Trigger: GGTGGGGGCTTGGTGAAGGCACACCAGGAAGAGCAG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCTGAGCAGTAGCCACTaGTGTCGTGCTCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERLSSSH*CRAPGA
Trigger: TGCGCCTGGAGCACGACAGCAGTGGCTACTGCTCAG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCTGAGCAGTAGCCACTaGTGTCGTGCTCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELSSSH*CRAPGA
Trigger: TGCGCCTGGAGCACGACAGCAGTGGCTACTGCTCAG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGATTGGCATCCGTCCCTaGACCGCGAACATCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERIGIRP*TANIPR
Trigger: ACGGGGGATGTTCGCGGTGCAGGGACGGATGCCAAT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTGATCTTCATCAGCTaGCCCAAATCCGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVELIFIS*PKSGAS
Trigger: GGATGCCCCGGATTTGGGGCAGCTGATGAAGATCAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCCCCGTGCCCAAGGTaGTGTTCCCTCTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSPCPR*CSLCLL
Trigger: GAGAAGGCAGAGGGAACAGCACCTTGGGCACGGGGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTCTTGGCTTCCCCGTaGCCAAGGTGCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGFLASP*PRCCSL
Trigger: GAGGGAACAGCACCTTGGGCACGGGGAAGCCAAGAA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGCGAATCCGAATCTTaGTCAGGGCCCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGESES*SGPPGQ
Trigger: TTGACCTGGGGGCCCTGACCAAGATTCGGATTCGCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGGCGAATCCGAATCTTaGTCAGGGCCCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGGESES*SGPPGQ
Trigger: TTGACCTGGGGGCCCTGACCAAGATTCGGATTCGCC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCGTCGTCTTCGTTTTTaGCCAGCCAGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERRLRF*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCGTCGTCTTCGTTTTTaGCCAGCCAGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRRLRF*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCGACATCGGCCATCTTaGAGCTCAGGGCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERRHRPS*SSGRSP
Trigger: GGGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGTTCAACATGTACTTaGTGCCCTGGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVESSTCT*CPGWAL
Trigger: CAGTGCCCACCCAGGGCACCAAGTACATGTTGAACT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTCTTCCCTGGCAAGGTaGCCCACACAGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSSLAR*PTQREA
Trigger: TGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTCTTCCCTGGCAAGGTaGCCCACACAGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESSLAR*PTQREA
Trigger: TGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERTGTRL*TLLAKL
Trigger: GAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVTGTRL*TLLAKL
Trigger: GAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCGTTGGCCCCAAAGATaGTCACGAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVERWPQR*SRRRWH
Trigger: ATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCACAGCCAGCTCGATGTaGAAGATGTCCGTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGTASSM*KMSVRP
Trigger: AGGCCGCACGGACATCTTCCACATCGAGCTGGCTGT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCATTGTCATCCTCATTaGCATCCAGCCAGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEHCHPH*HPASGC
Trigger: GCAACCGCTGGCTGGATGCCAATGAGGATGACAATG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCTCCACCACCTCGCTaGGATACAGCTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSPPPR*DTAPPP
Trigger: TGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCTCCACCACCTCGCTaGGATACAGCTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASPPPR*DTAPPP
Trigger: TGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTGTAGACTCGGGCACTaGTGCCTGCGCCACCCACAT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERCRLGH*CLRHPH
Trigger: ATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCTACA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGACCCGGCTTGCCAGCTaGCACCAACTCCACGACAAG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVTRLAS*HQLHDK
Trigger: CTTGTCGTGGAGTTGGTGCCAGCTGGCAAGCCGGGT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGACCCGGCTTGCCAGCTaGCACCAACTCCACGACAAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERTRLAS*HQLHDK
Trigger: CTTGTCGTGGAGTTGGTGCCAGCTGGCAAGCCGGGT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCGGTCACAATCACATaGTCCAGGTACCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSVTIT*SRYQLA
Trigger: TGCCAGCTGGTACCTGGACCATGTGATTGTGACCGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTGTACAGCCTCGTCTaGAGCTCTGCATGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVYSLV*SSAWKR
Trigger: CCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTTGGTCCGGTTCTCTaGCTTGCCAAGGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVGPVL*LAKVSL
Trigger: GAGCGATACCTTGGCAAGTCAGAGAACCGGACCAAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGCCCGGTCACTGTGCTaGTGTCGACATCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFARSLC*CRHRPS
Trigger: AGATGGCCGATGTCGACATCAGCACAGTGACCGGGC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGGATCCGCATCTTGGTaGATGGAGCAATGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGGSASW*MEQCLG
Trigger: TCCTAGACATTGCTCCATTCACCAAGATGCGGATCC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGCATGTCAGGGAAGTTaGATGTGTCCGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGACQGS*MCPCCS
Trigger: GGAACAACACGGACACATTCAACTTCCCTGACATGC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCTTGTCCAACCACCTaGGACATGGGAACTCCACGT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPCPTT*DMGTPR
Trigger: ACGTGGAGTTCCCATGTCTCAGGTGGTTGGACAAGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCACTTGCTCTTGCTGGTaGGCTGGAGCTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGTCSCW*AGAWER
Trigger: TCTCTCCCAAGCTCCAGCTCACCAGCAAGAGCAAGT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTGTTGTGGCCAACATTaGTCTTCATCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGCCGQH*SSSAAP
Trigger: TGGGGCAGCTGATGAAGATCAATGTTGGCCACAACA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAACCAGCCTGCTCTGTTaGCTGTGTTGTCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRTSLLC*LCCRGE
Trigger: TTCGCCACGACAACACAGGCAACAGAGCAGGCTGGT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTCCAGGAACCAGCCTaGTCTGTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVQEPA*SVACVV
Trigger: GACAACACAGGCAACAGAGCAGGCTGGTTCCTGGAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGTCCAGGAACCAGCCTaGTCTGTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRVQEPA*SVACVV
Trigger: GACAACACAGGCAACAGAGCAGGCTGGTTCCTGGAC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGATACTTCTGCTGGGTaGACACGGCATCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRDTSAG*TRHRSH
Trigger: ATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGATACTTCTGCTGGGTaGACACGGCATCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGDTSAG*TRHRSH
Trigger: ATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGCCACCCAGGATTCATaGCCGTGTTATTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGATQDS*PCYYGQ
Trigger: TTGGCCATAATAACACGGGCATGAATCCTGGGTGGC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTGCTGCAGTTGCTGCTaGGGTCCCCAGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVCCSCC*GPQCTP
Trigger: AGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTGCTGCAGTTGCTGCTaGGGTCCCCAGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSECCSCC*GPQCTP
Trigger: AGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGGGCTGCTGCAGTTGCTaGTGCGGTCCCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWGCCSC*CGPQCT
Trigger: AGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCC...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTCAACATGTACTTGGTaGCCTGGGTGGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSTCTW*PGWALP
Trigger: TGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGATGTTGGAGTCAGTaGCCCCGCCAACCACATCCC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRCWSQ*PRQPHP
Trigger: GGGATGTGGTTGGCGGGGGCACTGACTCCAACATCT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAVAGLN*DGVGGP
Trigger: TGGACCTCCTACACCGTCGCAGTTAAGACCAGCGAC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGTTGGCATCAGTGCCTaGTCCCAGGATGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEVGISA*SQDVAG
Trigger: ACCAGCGACATCCTGGGAGCAGGCACTGATGCCAAC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTTGGCATCAGTGCCTaGTCCCAGGATGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVGISA*SQDVAG
Trigger: ACCAGCGACATCCTGGGAGCAGGCACTGATGCCAAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGACACGTTGGCATCAGTaGCTGCTCCCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSETRWHQ*LLPGCR
Trigger: GCGACATCCTGGGAGCAGGCACTGATGCCAACGTGT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGACACGTTGGCATCAGTaGCTGCTCCCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERTRWHQ*LLPGCR
Trigger: GCGACATCCTGGGAGCAGGCACTGATGCCAACGTGT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAFQFAD*FRASVP
Trigger: TGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEKLVPV*RLLQGQ
Trigger: CTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGKLVPV*RLLQGQ
Trigger: CTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGCCAGACCCTCAGCTTaGAGAGGTGGCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFARPSA*RGGPSS
Trigger: TGAGCTTGGGCCACCTCTGCAAGCTGAGGGTCTGGC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFKSRTV*PSPSLL
Trigger: CAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTTGGCATCAGTGCCTaGCCCTGGCTCATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVGISA*PWLIAC
Trigger: ACAGGCTATGAGCCAGGGGCAGGCACTGATGCCAAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGACGTTGGCATCAGTaGCTGCCCCTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRRWHQ*LPLAHS
Trigger: GCTATGAGCCAGGGGCAGGCACTGATGCCAACGTCT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFGRSGL*CPARRG
Trigger: ACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWGRSGL*CPARRG
Trigger: ACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTGTGGAAGATGTCCGTaGGGCCTCGGTCAAACACGC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVCGRCP*GLGQTR
Trigger: GCGTGTTTGACCGAGGCCGCACGGACATCTTCCACA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCACCAGCTGGCATGCATaGCAGTGCTGTCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGTSWHA*QCCHAQ
Trigger: TTGGGCATGACAGCACTGGCATGCATGCCAGCTGGT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGAAAGGTGTACTGCTTaGCTTGACGGGGCACACGGA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAERCTA*LDGAHG
Trigger: TCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGAACACATCGACGTTaGCCTTCTCAAAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEGTHRR*PSQRQT
Trigger: AGTCTGCCTTTGAGAAGGGCAACGTCGATGTGTTCC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCATCATTCTGTCGGCTaGCTTCTCCCAGCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEHHSVG*LLPALA
Trigger: TGCGAGCGCTGGGAGAAGGCAGCCGACAGAATGATG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGGGTCAGCTGGCCCATaGGCTCTAGGTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTGSAGP*ALGAGA
Trigger: GGCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTTGCCTGTGTTGTCGTaGCGAATCCGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLPVLS*RIRILV
Trigger: GACCAAGATTCGGATTCGCCACGACAACACAGGCAA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTCTACAAACCAGCCTaGGGCCTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVYKPA*GLACVV
Trigger: GACAACACAGGCAAGGCCCCAGGCTGGTTTGTAGAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRALPKR*GIHLYP
Trigger: TGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGALPKR*GIHLYP
Trigger: TGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCGTCGTCTTCGTTTTTaGCCAGCCAGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRRLRF*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCACAGATACTTCTGCTaGGTGCACACGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGHRYFC*VHTASQ
Trigger: CTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANACHPQR*QATDRM
Trigger: CATGCGATCGGTGGCTTGCCACCTCTGAGGATGACA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCTCTCTCGAACTTGTTaGTCCGGTTCTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLSRTC*SGSLTC
Trigger: GCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTCTCTCGAACTTGTTaGTCCGGTTCTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVELSRTC*SGSLTC
Trigger: GCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCGACATCGGCCATCTTaGAGCTCAGGGCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRHRPS*SSGRSP
Trigger: GGGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCGTCGCCTCTGTCCTTaGCCAGCCAGCAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRRLCP*PASSYS
Trigger: ACTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCTCAGCTTGCAGAGGTaGCCCAAGCTCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALSLQR*PKLSMS
Trigger: TGACATGCTGAGCTTGGGCCACCTCTGCAAGCTGAG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCAGTCACACTGGAAGTaGAAGGTCTCGTCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERQSHWK*KVSSRE
Trigger: CTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCAGTCACACTGGAAGTaGAAGGTCTCGTCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVQSHWK*KVSSRE
Trigger: CTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCGTCACCCTCACTCTTaGAGAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARHPHS*RASSHT
Trigger: AGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCGTCACCCTCACTCTTaGAGAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRHPHS*RASSHT
Trigger: AGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGHRSCC*HRQSRG
Trigger: TCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEHRSCC*HRQSRG
Trigger: TCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCTTCCCTGGCAAGGTaGCCCACACAGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSSLAR*PTQREA
Trigger: TGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCTTCCCTGGCAAGGTaGCCCACACAGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWSSLAR*PTQREA
Trigger: TGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGGCTCTGGACCTTGCTaGCAAAGCTCTCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAGSGPC*QSSLSS
Trigger: AGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWTGTRL*TLLAKL
Trigger: GAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTATCAGTGCCTGCCCCTaGCTCATAGCCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAISACP*LIACCH
Trigger: GTGACAACAGGCTATGAGCCAGGGGCAGGCACTGAT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTGCCTGTGTCTCCGTTaGCCCCAAAGATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGCLCLR*PQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTGCACACAGTCACATaGTACCGGGCCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVHTVT*YRAMPM
Trigger: CATGGGCATGGCCCGGTACCATGTGACTGTGTGCAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTCGCGCTGCTGTCACTaGGTAGCAACTCTCGGACCA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESRCCH*VATLGP
Trigger: TGGTCCGAGAGTTGCTACCCAGTGACAGCAGCGCGA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCGCGCTGCTGTCACTaGGTAGCAACTCTCGGACCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSRCCH*VATLGP
Trigger: TGGTCCGAGAGTTGCTACCCAGTGACAGCAGCGCGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTGTCCAGCCAGCGGTTaGCGGGAAAGGTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVCPASG*RERCTA
Trigger: AGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCGGCCGCCTCAAGCTaGAATGTGTCCTTGGACGCC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSAASS*NVSLDA
Trigger: GGCGTCCAAGGACACATTCCAGCTTGAGGCGGCCGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTCTTCCTCTGCAGCTTaGCCTTCAGCCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSSSAA*PSAAPS
Trigger: AGAAGGAGCGGCTGAAGGCCAAGCTGCAGAGGAAGA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGGCAGCCTGCTCTTCCTaGTGTGCCTTCACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWAACSS*CAFTKP
Trigger: GGGCTTGGTGAAGGCACACCAGGAAGAGCAGGCTGC...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERPASPP*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACGGTGGAGACGCTGG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGTGTACAGCCTCGTCTaGAGCTCTGCATGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEVYSLV*SSAWKR
Trigger: CCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACAC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCACTGGTGTAGAGGGTaGTCTCGTAAGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEHWCRG*SRKEQM
Trigger: CATTTGTTCCTTACGAGATCACCCTCTACACCAGTG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCTTCTAACTCTACGATaGAGCGGGAGGCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGLLTLR*SGRQTS
Trigger: GGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGAAG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTTGGTCCGGTTCTCTaGCTTGCCAAGGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERVGPVL*LAKVSL
Trigger: GAGCGATACCTTGGCAAGTCAGAGAACCGGACCAAC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCGTTGCCCGTTTCTATaGCGATCTCGTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRCPFL*RSRRWS
Trigger: AGACCACCTACGAGATCGTCATAGAAACGGGCAACG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGCCCATAAATCTGGATaGAGATGGGAGAGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEAHKSG*RWESWY
Trigger: GTACCAACTCTCCCATCTTCATCCAGATTTATGGGC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCTTTGCCATCGTGTCTaGTCCTCACCCGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLCHRV*SSPASH
Trigger: ATGTGAGGCGGGTGAGGATCAGACACGATGGCAAAG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTGGGCACATTCCCCGTaGCCACCTGAACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFWAHSP*PPEPHR
Trigger: CCTATGAGGTTCAGGTGGTCACGGGGAATGTGCCCA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAATCCACTGGAGAAGTaGGACAATCCCCTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGNPLEK*DNPLVP
Trigger: TGGAACTAGGGGATTGTCTCACTTCTCCAGTGGATT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGACTTGCTCTTGCTGGTaGGCTGGAGCTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVTCSCW*AGAWER
Trigger: TCTCTCCCAAGCTCCAGCTCACCAGCAAGAGCAAGT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWTSLGP*LCCHGQ
Trigger: TTGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACACAGGGAAACGTCATaGACTTCCCAAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRHRETS*TSQEMG
Trigger: CCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGATACTTCTGCTGGGTaGACACGGCATCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEDTSAG*TRHRSH
Trigger: ATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTCCCTGTGAAGATCTaGACCGAGTACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEFPVKI*TEYSTM
Trigger: CATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCCGGTTCTCTGACTTaGCAAGGTATCGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSGSLT*QGIAPQ
Trigger: CTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTCCGGTTCTCTGACTTaGCAAGGTATCGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSGSLT*QGIAPQ
Trigger: CTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCTCCACGTACCAGTCTaGGCACCACTTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERLHVPV*APLGVV
Trigger: GACAACTCCAAGTGGTGCGCAGACTGGTACGTGGAG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCAGTCAGCAGGGCTGCTaGAGTTGCTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSSQQGC*SCCCGP
Trigger: GGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACT...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFAHIQA*DVELLH
Trigger: GTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTATGAAGGTGTCGTTCTaGTCCCGCTCAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAMKVSF*SRSNLA
Trigger: AGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCAT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVAGLN*DGVGGP
Trigger: TGGACCTCCTACACCGTCGCAGTTAAGACCAGCGAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGGTTGGCATCAGTGCCTaGTCCCAGGATGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWVGISA*SQDVAG
Trigger: ACCAGCGACATCCTGGGAGCAGGCACTGATGCCAAC...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTACACGTTGGCATCAGTaGCTGCTCCCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFTRWHQ*LLPGCR
Trigger: GCGACATCCTGGGAGCAGGCACTGATGCCAACGTGT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVFQFAD*FRASVP
Trigger: TGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCGCCAGACCCTCAGCTTaGAGAGGTGGCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVARPSA*RGGPSS
Trigger: TGAGCTTGGGCCACCTCTGCAAGCTGAGGGTCTGGC...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGVMVLT*QASSLL
Trigger: CAAGAGAGAACTTGCCTGGCATGTCAAGACCATCAC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGCCAGGCTCTGGACCTTaGTGGCAAAGCTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWPGSGP*WQSSLS
Trigger: CGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGG...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTTGGCATCAGTGCCTaGCCCTGGCTCATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVGISA*PWLIAC
Trigger: ACAGGCTATGAGCCAGGGGCAGGCACTGATGCCAAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAGACGTTGGCATCAGTaGCTGCCCCTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRRWHQ*LPLAHS
Trigger: GCTATGAGCCAGGGGCAGGCACTGATGCCAACGTCT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCGCTTCAGCTCCCGCTTaGCTGTGTCTCCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSASAPA*LCLRWP
Trigger: GGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGC...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPARRG*AFSASA
Trigger: AGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGTCTGTGTTATTCCTaGAGTTGTAGAGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEGLCYS*SCRAAV
Trigger: AACGGCTGCTCTACAACTGCAGGAATAACACAGACC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCTTCAGTGTCGCGCTaGTGTCACTGGGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASSVSR*CHWVAT
Trigger: AGTTGCTACCCAGTGACAGCAGCGCGACACTGAAGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTCTTCAGTGTCGCGCTaGTGTCACTGGGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSSVSR*CHWVAT
Trigger: AGTTGCTACCCAGTGACAGCAGCGCGACACTGAAGA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGATGCCAGTGCTGTCATaGCCAATCACCAGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEMPVLS*PITSRL
Trigger: CAACCGGCTGGTGATTGGGCATGACAGCACTGGCAT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATGGCATGCATGCCAGTaGTGTCATGCCCAATCACCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRWHACQ*CHAQSP
Trigger: TGGTGATTGGGCATGACAGCACTGGCATGCATGCCA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGACCAGCTGGCATGCATaGCAGTGCTGTCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERTSWHA*QCCHAQ
Trigger: TTGGGCATGACAGCACTGGCATGCATGCCAGCTGGT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGAAAGGTGTACTGCTTaGCTTGACGGGGCACACGGA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERERCTA*LDGAHG
Trigger: TCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCGTCCTCTTCGTCGCTaGCCTTCCTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARPLRR*PSSSSS
Trigger: AGAAGAAGAAGAGGAAGGGCAGCGACGAAGAGGACG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGGGCTTCGAACTTGTaGTGCTCAATCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAWASNL*CSITSC
Trigger: GCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATTGATCTTCATCAGCTaGCCCAAATCCGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLIFIS*PKSGAS
Trigger: GGATGCCCCGGATTTGGGGCAGCTGATGAAGATCAA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGGCGAATCCGAATCTTaGTCAGGGCCCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFGESES*SGPPGQ
Trigger: TTGACCTGGGGGCCCTGACCAAGATTCGGATTCGCC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCAGCCAACGTTGGCATaGAAAGTAGTACGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGQPTLA*KVVRDL
Trigger: GAGATCACGTACTACTTTCCATGCCAACGTTGGCTG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGCTCCCTGGACAGCTaGCCATCATCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESSLDS*PSSSST
Trigger: AGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGCTCCCTGGACAGCTaGCCATCATCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSSLDS*PSSSST
Trigger: AGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCATAGGACTCATCCACTaGCAACAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGIGLIH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTAT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGACCCTCCTCGCTCTGTaGCAGCACATAGGACTCATC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSETLLAL*QHIGLI
Trigger: GATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERALPKR*GIHLYP
Trigger: TGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTCGTAAGGAACAAATaGTGTGTACAGCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVELVRNK*CVQPRL
Trigger: CAGACGAGGCTGTACACACCATTTGTTCCTTACGAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCACAGATACTTCTGCTaGGTGCACACGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVHRYFC*VHTASQ
Trigger: CTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAKPPIA*ESQGLC
Trigger: GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVCHPQR*QATDRM
Trigger: CATGCGATCGGTGGCTTGCCACCTCTGAGGATGACA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCTCAGCTTGCAGAGGTaGCCCAAGCTCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERLSLQR*PKLSMS
Trigger: TGACATGCTGAGCTTGGGCCACCTCTGCAAGCTGAG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCTCAGCTTGCAGAGGTaGCCCAAGCTCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELSLQR*PKLSMS
Trigger: TGACATGCTGAGCTTGGGCCACCTCTGCAAGCTGAG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCGTCACCCTCACTCTTaGAGAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRHPHS*RASSHT
Trigger: AGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGGCTCTGGACCTTGCTaGCAAAGCTCTCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEGSGPC*QSSLSS
Trigger: AGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVTGTRL*TLLAKL
Trigger: GAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGATCAGTGCCTGCCCCTaGCTCATAGCCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVISACP*LIACCH
Trigger: GTGACAACAGGCTATGAGCCAGGGGCAGGCACTGAT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCGTTGGCCCCAAAGATaGTCACGAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRWPQR*SRRRWH
Trigger: ATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACGTTGGCCCCAAAGATaGTCACGAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRRWPQR*SRRRWH
Trigger: ATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTGCCTGTGTCTCCGTTaGCCCCAAAGATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSECLCLR*PQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTGCCTGTGTCTCCGTTaGCCCCAAAGATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERCLCLR*PQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGATCCTGCGCACTGTTaGGCCTTCTGCAGTCATTTC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGDPAHC*AFCSHF
Trigger: GAAATGACTGCAGAAGGCCCAACAGTGCGCAGGATC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTGCACACAGTCACATaGTACCGGGCCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVHTVT*YRAMPM
Trigger: CATGGGCATGGCCCGGTACCATGTGACTGTGTGCAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGGCAGAGATAGACGTTaGCATCGGTCCCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVGRDRR*HRSQHL
Trigger: AAGGTGCTGGGACCGATGCCAACGTCTATCTCTGCC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACAACCACCTGAGACATaGGAACTCCACGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRQPPET*ELHVVA
Trigger: AGCGACAACGTGGAGTTCCCATGTCTCAGGTGGTTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCAACCACCTGAGACATaGGAACTCCACGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAQPPET*ELHVVA
Trigger: AGCGACAACGTGGAGTTCCCATGTCTCAGGTGGTTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTGTCCAGCCAGCGGTTaGCGGGAAAGGTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFCPASG*RERCTA
Trigger: AGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGCTGGAATGTGTCCTTaGACGCCCGTTCAAAAACTT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGAGMCP*TPVQKL
Trigger: AAGTTTTTGAACGGGCGTCCAAGGACACATTCCAGC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCTTCCTCTGCAGCTTaGCCTTCAGCCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSSSAA*PSAAPS
Trigger: AGAAGGAGCGGCTGAAGGCCAAGCTGCAGAGGAAGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCTCTTGCTGGTGAGCTaGAGCTTGGGAGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLLLVS*SLGESP
Trigger: TGGGCTCTCTCCCAAGCTCCAGCTCACCAGCAAGAG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGGTCCAGGTACCAGCTaGCATTCAAGCCCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVGPGTS*HSSPCC
Trigger: ACAACACGGGCTTGAATGCCAGCTGGTACCTGGACC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCGGTCACAATCACATaGTCCAGGTACCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASVTIT*SRYQLA
Trigger: TGCCAGCTGGTACCTGGACCATGTGATTGTGACCGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTGTACAGCCTCGTCTaGAGCTCTGCATGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVYSLV*SSAWKR
Trigger: CCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACAGGAATGTTCCCTGTaGAGATCTGCACCGAGTACA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRQECSL*RSAPST
Trigger: TGTACTCGGTGCAGATCTTCACAGGGAACATTCCTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGGTCTCCATAGATGGTaGTGTACACCTTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERGLHRW*CTPWHP
Trigger: CGGATGCCAAGGTGTACATCACCATCTATGGAGACC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTTCCCAGTGGTGACTaGCACATAGTAGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVELPSGD*HIVGNN
Trigger: ATTATTCCCTACTATGTGTCAGTCACCACTGGGAAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCGAAGACACGGGAGGTaGTGCCGTCGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTRRHGR*CRRLCP
Trigger: AGGACAGAGGCGACGGCATCACCTCCCGTGTCTTCG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGGATCCGCATCTTGGTaGATGGAGCAATGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAGSASW*MEQCLG
Trigger: TCCTAGACATTGCTCCATTCACCAAGATGCGGATCC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGGATCCGCATCTTGGTaGATGGAGCAATGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGGSASW*MEQCLG
Trigger: TCCTAGACATTGCTCCATTCACCAAGATGCGGATCC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGATCCGCATCTTGGTaGATGGAGCAATGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGSASW*MEQCLG
Trigger: TCCTAGACATTGCTCCATTCACCAAGATGCGGATCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCATGTCAGGGAAGTTaGATGTGTCCGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAACQGS*MCPCCS
Trigger: GGAACAACACGGACACATTCAACTTCCCTGACATGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCGTTGCCCGTTTCTATaGCGATCTCGTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERCPFL*RSRRWS
Trigger: AGACCACCTACGAGATCGTCATAGAAACGGGCAACG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTCTGCTGGATACCAGTaGAGGGGCACAGAATCACCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSAGYQ*RGTESP
Trigger: TGGTGATTCTGTGCCCCTTCACTGGTATCCAGCAGA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCTGCTGGATACCAGTaGAGGGGCACAGAATCACCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSAGYQ*RGTESP
Trigger: TGGTGATTCTGTGCCCCTTCACTGGTATCCAGCAGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCAGCCGCTTCTTCCTaGGAGACACCATCTCATAGA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSAASS*ETPSHR
Trigger: TCTATGAGATGGTGTCTCTCAGGAAGAAGCGGCTGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGCCAGCGGTTGCAATTaGAGTTGTACTTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGASGCN*SCTCLC
Trigger: ACAAAGACAAGTACAACTTCAATTGCAACCGCTGGC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCTTTGCCATCGTGTCTaGTCCTCACCCGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLCHRV*SSPASH
Trigger: ATGTGAGGCGGGTGAGGATCAGACACGATGGCAAAG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCGTTCAAAAACTTTTaGGCGGCTGGAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPFKNF*AAGEEE
Trigger: CTCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTCCCAATATCTTCAATaGCTATCTGGGACAGGAACC +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVESQYLQ*LSGTGT
Trigger: GGTTCCTGTCCCAGATAGTCATTGAAGATATTGGGA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCCCAATATCTTCAATaGCTATCTGGGACAGGAACC +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSQYLQ*LSGTGT
Trigger: GGTTCCTGTCCCAGATAGTCATTGAAGATATTGGGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTACCAGCCTGCTCTGTTaGCTGTGTTGTCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFTSLLC*LCCRGE
Trigger: TTCGCCACGACAACACAGGCAACAGAGCAGGCTGGT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGATCATCTTCCTCCACTaGCAGCCAACGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEIIFLH*QPTLAW
Trigger: CCATGCCAACGTTGGCTGGCAGTGGAGGAAGATGAT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGATCATCTTCCTCCACTaGCAGCCAACGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERIIFLH*QPTLAW
Trigger: CCATGCCAACGTTGGCTGGCAGTGGAGGAAGATGAT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGATGTCAGGATTACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: QATDRMGKSRSLHPDVRITSLGP*LCCHGQ
Trigger: TTGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...AATCCTGACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCACAGGGAAACGTCATaGACTTCCCAAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVHRETS*TSQEMG
Trigger: CCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACCTCGTCTGAAGCTCTaGATGGAAGAGGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRPRLKL*MEEVSD
Trigger: ATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCTCGTCTGAAGCTCTaGATGGAAGAGGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPRLKL*MEEVSD
Trigger: ATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGGATACTTCTGCTGGGTaGACACGGCATCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWDTSAG*TRHRSH
Trigger: ATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATC...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp GTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCGTACACAGATACTTCTaGTGGGTGCACACGGCATCG +
Preference number: 4 (lower is better)
Translates to: VILRGGKPPIAWESQGLCVHRYF*WVHTAS
Trigger: CGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTAC...GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTACACAGATACTTCTaGTGGGTGCACACGGCATCG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVHRYF*WVHTAS
Trigger: CGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCCACCCAGGATTCATaGCCGTGTTATTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAATQDS*PCYYGQ
Trigger: TTGGCCATAATAACACGGGCATGAATCCTGGGTGGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp TGGGAAAGTCAAGGTCTCTGCACCCTGATGTCAGGATTTCAAGACCAGCTTGGCTATCCGGGAGGAGCCTaGGGATGTCCACGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: WESQGLCTLMSGFQDQLGYPGGA*GCPRES
Trigger: GCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATA...GCCAAGCTGGTCTTGAAATCCTGACATCAGGGTGCAGAGACCTTGACTTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCTCCACGTACCAGTCTaGGCACCACTTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLHVPV*APLGVV
Trigger: GACAACTCCAAGTGGTGCGCAGACTGGTACGTGGAG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAGGGCTGCTGCAGTTaGTGCTGCGGTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTQGCCS*CCGPQC
Trigger: ACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCAACATGTACTTGGTaGCCTGGGTGGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWSTCTW*PGWALP
Trigger: TGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGATGAAGGTGTCGTTCTaGTCCCGCTCAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERMKVSF*SRSNLA
Trigger: AGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCAT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVAGLN*DGVGGP
Trigger: TGGACCTCCTACACCGTCGCAGTTAAGACCAGCGAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFFQFAD*FRASVP
Trigger: TGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTCCTAAAGGCCCGCTaGCTAGAAGAATTTTCCATG +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVEFLKAR*LEEFSM
Trigger: CATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTTCCTAAAGGCCCGCTaGCTAGAAGAATTTTCCATG +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGFLKAR*LEEFSM
Trigger: CATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRLRIF*FSSRLP
Trigger: AGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERPARRG*AFSASA
Trigger: AGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEPARRG*AFSASA
Trigger: AGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCTACAAGGGAAGGTCTaGTGGATACCAGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLQGKV*WIPVKG
Trigger: CCCCTTCACTGGTATCCAGCAGACCTTCCCTTGTAG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAAACTCTCGGACCAGCTaGCCATCATCCTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRNSRTS*PSSLSL
Trigger: CAAGGATAAGGATGATGGGCAGCTGGTCCGAGAGTT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAACTCTCGGACCAGCTaGCCATCATCCTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGNSRTS*PSSLSL
Trigger: CAAGGATAAGGATGATGGGCAGCTGGTCCGAGAGTT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCGTCCTCTTCGTCGCTaGCCTTCCTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERPLRR*PSSSSS
Trigger: AGAAGAAGAAGAGGAAGGGCAGCGACGAAGAGGACG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCTTCGAACTTGTGCTaGTCAATCACCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRASNLC*SITSCI
Trigger: GATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCTTCGAACTTGTGCTaGTCAATCACCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAASNLC*SITSCI
Trigger: GATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGATAGGACTCATCCACTaGCAACAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERIGLIH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTAT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTTGCCTGTGTTGTCATaGCCAAGCCGGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELPVLS*PSRTFH
Trigger: GTGGAAAGTCCGGCTTGGCCATGACAACACAGGCAA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTGCCTGTGTTGTCATaGCCAAGCCGGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLPVLS*PSRTFH
Trigger: GTGGAAAGTCCGGCTTGGCCATGACAACACAGGCAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCACAGATACTTCTGCTaGGTGCACACGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFHRYFC*VHTASQ
Trigger: CTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVKPPIA*ESQGLC
Trigger: GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATG +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWCHPQR*QATDRM
Trigger: CATGCGATCGGTGGCTTGCCACCTCTGAGGATGACA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFCHPQR*QATDRM
Trigger: CATGCGATCGGTGGCTTGCCACCTCTGAGGATGACA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGAACTCGTCCTCGTTaGTGTCATTCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGTRPR*CHSRSP
Trigger: TGGAGATCTGGAATGACACCAACGAGGACGAGTTCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGGAACTCGTCCTCGTTaGTGTCATTCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAGTRPR*CHSRSP
Trigger: TGGAGATCTGGAATGACACCAACGAGGACGAGTTCC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCGTCGCCTCTGTCCTTaGCCAGCCAGCAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVRRLCP*PASSYS
Trigger: ACTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACG...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGCTCCCGCTCAAACCTaGCTTTCTTTTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRAPAQT*LSFCPA
Trigger: AGCTGGACAAAAAGAAAGCCAGGTTTGAGCGGGAGC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCTCCATAGTAGAACATaGTCAGGTCTCCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLHSRT*SGLQCS
Trigger: TGAACACTGGAGACCTGACCATGTTCTACTATGGAG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGCTCAGCTTGCAGAGGTaGCCCAAGCTCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWLSLQR*PKLSMS
Trigger: TGACATGCTGAGCTTGGGCCACCTCTGCAAGCTGAG...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGCGTCACCCTCACTCTTaGAGAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWRHPHS*RASSHT
Trigger: AGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACG...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAHRSCC*HRQSRG
Trigger: TCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGCCAGACGTTCTCCCTaGTTTCGCCTCCGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTARRSP*FRLRCP
Trigger: CGGGCAACGGAGGCGAAACCAGGGAGAACGTCTGGC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTATCAGTGCCTGCCCCTaGCTCATAGCCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFISACP*LIACCH
Trigger: GTGACAACAGGCTATGAGCCAGGGGCAGGCACTGAT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCATTGTCATCCTCATTaGCATCCAGCCAGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERHCHPH*HPASGC
Trigger: GCAACCGCTGGCTGGATGCCAATGAGGATGACAATG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGCCCTCTGTCTCCACTaGAGGGTGAGGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVALCLH*RVRRSL
Trigger: CAGGCTGCGCCTCACCCTCCAGTGGAGACAGAGGGC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAACTGCCTCAATCCACTaGAGAAGTGAGACAATCCCC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRTASIH*RSETIP
Trigger: GGGGATTGTCTCACTTCTCCAGTGGATTGAGGCAGT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGGTCCAGGTACCAGCTaGCATTCAAGCCCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFGPGTS*HSSPCC
Trigger: ACAACACGGGCTTGAATGCCAGCTGGTACCTGGACC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCTTCAATGACTATCTaGGACAGGAACCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSSMTI*DRNQPA
Trigger: TGCAGGTTGGTTCCTGTCCCAGATAGTCATTGAAGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVPASPP*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACGGTGGAGACGCTGG...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACACTGGTGTAGAGGGTaGTCTCGTAAGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRHWCRG*SRKEQM
Trigger: CATTTGTTCCTTACGAGATCACCCTCTACACCAGTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLSCPPG*ARRSPW
Trigger: CCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGA...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCAGCCGCTTCTTCCTaGGAGACACCATCTCATAGA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSAASS*ETPSHR
Trigger: TCTATGAGATGGTGTCTCTCAGGAAGAAGCGGCTGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCGATTATGCCGGGTTTaGACCACTTGTTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRLCRV*TTCCWD
Trigger: ATCCCAACAACAAGTGGTTCAAACCCGGCATAATCG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCCCAGTCTTCAAGCTaGTGTGATAGCGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPQSSS*CDSESS
Trigger: AGAACTTTCGCTATCACATCAGCTTGAAGACTGGGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCCGTTCAAAAACTTTTaGGCGGCTGGAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERPFKNF*AAGEEE
Trigger: CTCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATTTGTTGGACTTGTCTaGCTTCTTCAGGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRFVGLV*LLQGSF
Trigger: GAACGACCCCTGAAGAAGTCAGACAAGTCCAACAAA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGCCAGTTGTTGCAGTTaGAGTAGTAACGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGASCCS*SSNGDE
Trigger: CTCATCTCCGTTACTACTTCAACTGCAACAACTGGC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTGTTGTGGCCAACATTaGTCTTCATCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVCCGQH*SSSAAP
Trigger: TGGGGCAGCTGATGAAGATCAATGTTGGCCACAACA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCAATGGCATAGATGGTaGAGGTGTCTGTCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERQWHRW*RCLSSA
Trigger: GGCACTTGACAGACACCTTCACCATCTATGCCATTG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAAGTGCCTCAGCATCTaGCACTCAACGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERKCLSI*HSTPFS
Trigger: AGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR GCA 90 bp GTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCCCTCGTCTGAAGCTCTaGATGGAAGAGGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VILRGGKPPIAWESQGLCPRLKL*MEEVSD
Trigger: ATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGG...GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCCTCGTCTGAAGCTCTaGATGGAAGAGGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEPRLKL*MEEVSD
Trigger: ATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTATCCGGGAGGAGCCTaGGGATGTCCACGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTYPGGA*GCPRES
Trigger: GCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCAGGGCTGCTGCAGTTaGTGCTGCGGTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVQGCCS*CCGPQC
Trigger: ACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTATGAAGGTGTCGTTCTaGTCCCGCTCAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFMKVSF*SRSNLA
Trigger: AGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCAT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTACCACTCCGGCCGACTaGCCAGGCCATCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASTTPAD*PGHQSG
Trigger: TCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGT...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCTTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVFQFAD*FRASVP
Trigger: TGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAA...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERKLVPV*RLLQGQ
Trigger: CTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEKLVPV*RLLQGQ
Trigger: CTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVMVLT*QASSLL
Trigger: CAAGAGAGAACTTGCCTGGCATGTCAAGACCATCAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCGTTGGCATCAGTGCCTaGCCCTGGCTCATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSVGISA*PWLIAC
Trigger: ACAGGCTATGAGCCAGGGGCAGGCACTGATGCCAAC...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRLRIF*FSSRLP
Trigger: AGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWRLRIF*FSSRLP
Trigger: AGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCT...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFPARRG*AFSASA
Trigger: AGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTTCTCATCCACACTCTaGAGCAAGTCCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWFSSTL*SKSQPG
Trigger: ACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTCTCATCCAGCCAGTTaGTACAAGGGAAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSHPAS*YKGRSA
Trigger: AGCAGACCTTCCCTTGTAGCAACTGGCTGGATGAGA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACACTGTTGGGCCTTCTaGAGTCATTTCCCTCACTAT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRHCWAF*SHFPHY
Trigger: ATAGTGAGGGAAATGACTGCAGAAGGCCCAACAGTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCACTGTTGGGCCTTCTaGAGTCATTTCCCTCACTAT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGHCWAF*SHFPHY
Trigger: ATAGTGAGGGAAATGACTGCAGAAGGCCCAACAGTG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGGTCTGTGTTATTCCTaGAGTTGTAGAGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGGLCYS*SCRAAV
Trigger: AACGGCTGCTCTACAACTGCAGGAATAACACAGACC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTGGCATGCATGCCAGTaGTGTCATGCCCAATCACCA +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFWHACQ*CHAQSP
Trigger: TGGTGATTGGGCATGACAGCACTGGCATGCATGCCA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTGGGCTTCGAACTTGTaGTGCTCAATCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFWASNL*CSITSC
Trigger: GCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGTGTCTGTCTGCCCCTaGTCAAATTTGTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAVSVCP*SNLLDL
Trigger: CAAGTCCAACAAATTTGAGCAGGGGCAGACAGACAC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGTGAAGGTGTCTGTCTaGCCCTGCTCAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRVKVSV*PCSNLL
Trigger: CAACAAATTTGAGCAGGGGCAGACAGACACCTTCAC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTGAAGGTGTCTGTCTaGCCCTGCTCAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVKVSV*PCSNLL
Trigger: CAACAAATTTGAGCAGGGGCAGACAGACACCTTCAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGAACAGAGGGAGCACTaGCTCAATCCACTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFEQREH*LNPLEK
Trigger: CTTCTCCAGTGGATTGAGGCAGTGCTCCCTCTGTTC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGGAACACATCGACGTTaGCCTTCTCAAAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEGTHRR*PSQRQT
Trigger: AGTCTGCCTTTGAGAAGGGCAACGTCGATGTGTTCC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCAGCTCCCTGGACAGCTaGCCATCATCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVSSLDS*PSSSST
Trigger: AGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCT...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTATAGGACTCATCCACTaGCAACAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFIGLIH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTAT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATATCGCTGTTTGTCTTaGAGGACTTCAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRYRCLS*RTSGGS
Trigger: TGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTTGCCTGTGTTGTCATaGCCAAGCCGGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWLPVLS*PSRTFH
Trigger: GTGGAAAGTCCGGCTTGGCCATGACAACACAGGCAA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTTGCCTGTGTTGTCATaGCCAAGCCGGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLPVLS*PSRTFH
Trigger: GTGGAAAGTCCGGCTTGGCCATGACAACACAGGCAA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCGTCGTCTTCGTTTTTaGCCAGCCAGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTRRLRF*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACTCGTAAGGAACAAATaGTGTGTACAGCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLVRNK*CVQPRL
Trigger: CAGACGAGGCTGTACACACCATTTGTTCCTTACGAG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCTGTTCCCTCTTGTTaGTACACAGATACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSVPSC*YTDTSA
Trigger: AGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFKPPIA*ESQGLC
Trigger: GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGAACCAGTTCTCGAATaGTCTTTTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSANARGFEGLLTAKVEGEPVLE*SFCHPQ
Trigger: CTGAGGATGACAAAAAGACCATTCGAGAACTGGTTC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCTCTCTCGAACTTGTTaGTCCGGTTCTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLSRTC*SGSLTC
Trigger: GCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGGAACTCGTCCTCGTTaGTGTCATTCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVGTRPR*CHSRSP
Trigger: TGGAGATCTGGAATGACACCAACGAGGACGAGTTCC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCAATGTTCACCACCATaGCATCCAAGAGGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAQCSPP*HPRGRR
Trigger: TCTTCGACCTCTTGGATGCCATGGTGGTGAACATTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGCTCCCGCTCAAACCTaGCTTTCTTTTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERAPAQT*LSFCPA
Trigger: AGCTGGACAAAAAGAAAGCCAGGTTTGAGCGGGAGC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGCCAGACGTTCTCCCTaGTTTCGCCTCCGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVARRSP*FRLRCP
Trigger: CGGGCAACGGAGGCGAAACCAGGGAGAACGTCTGGC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTTGTRL*TLLAKL
Trigger: GAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCGTTGGCCCCAAAGATaGTCACGAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRWPQR*SRRRWH
Trigger: ATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCTGGAATGTGTCCTTaGACGCCCGTTCAAAAACTT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAAGMCP*TPVQKL
Trigger: AAGTTTTTGAACGGGCGTCCAAGGACACATTCCAGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCTCCGCCTTTTCTTCTaGGGCATCATTCTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLRLFF*GIILSA
Trigger: AGCCGACAGAATGATGCCCCAGAAGAAAAGGCGGAG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCTTCCCAGTGGTGACTaGCACATAGTAGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALPSGD*HIVGNN
Trigger: ATTATTCCCTACTATGTGTCAGTCACCACTGGGAAG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCCACAGAGCCACGGCTaGAGCCCCTCTTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCPQSHG*SPSSLG
Trigger: CCCGAGGGAAGAGGGGCTTCAGCCGTGGCTCTGTGG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGCATGTCAGGGAAGTTaGATGTGTCCGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFACQGS*MCPCCS
Trigger: GGAACAACACGGACACATTCAACTTCCCTGACATGC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGGCATGTCAGGGAAGTTaGATGTGTCCGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWACQGS*MCPCCS
Trigger: GGAACAACACGGACACATTCAACTTCCCTGACATGC...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGCCCATAAATCTGGATaGAGATGGGAGAGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERAHKSG*RWESWY
Trigger: GTACCAACTCTCCCATCTTCATCCAGATTTATGGGC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCCAGCGGTTGCAATTaGAGTTGTACTTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAASGCN*SCTCLC
Trigger: ACAAAGACAAGTACAACTTCAATTGCAACCGCTGGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCCCCAGTCTTCAAGCTaGTGTGATAGCGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEPQSSS*CDSESS
Trigger: AGAACTTTCGCTATCACATCAGCTTGAAGACTGGGG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTTTGTTGGACTTGTCTaGCTTCTTCAGGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEFVGLV*LLQGSF
Trigger: GAACGACCCCTGAAGAAGTCAGACAAGTCCAACAAA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTAGATTTATCTTTCTaGTCCAGGGCCAGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERVDLSF*SRARLS
Trigger: CGACAACCTGGCCCTGGAGCAGAAAGATAAATCTAC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGTAGATTTATCTTTCTaGTCCAGGGCCAGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEVDLSF*SRARLS
Trigger: CGACAACCTGGCCCTGGAGCAGAAAGATAAATCTAC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTCCCTGTGAAGATCTaGACCGAGTACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVFPVKI*TEYSTM
Trigger: CATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCTCCGGTTCTCTGACTTaGCAAGGTATCGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSSGSLT*QGIAPQ
Trigger: CTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGA...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTGCTGCAGTTGCTGCTaGGGTCCCCAGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTCCSCC*GPQCTP
Trigger: AGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGTGGCCGCGTCCTTGTaGTTCCCAGTGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVVAASL*FPVVTD
Trigger: GTCAGTCACCACTGGGAAGCACAAGGACGCGGCCAC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTGTGGCCGCGTCCTTGTaGTTCCCAGTGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASVAASL*FPVVTD
Trigger: GTCAGTCACCACTGGGAAGCACAAGGACGCGGCCAC...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGGTAGTCCAACCAGATaGGCTTACTACGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGGSPTR*AYYVHH
Trigger: ATGATGAACGTAGTAAGCGCATCTGGTTGGACTACC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGCCAGACCCTCAGCTTaGAGAGGTGGCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVARPSA*RGGPSS
Trigger: TGAGCTTGGGCCACCTCTGCAAGCTGAGGGTCTGGC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLKSRTV*PSPSLL
Trigger: CAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTT...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASKSRTV*PSPSLL
Trigger: CAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTT...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTCCTAAAGGCCCGCTaGCTAGAAGAATTTTCCATG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAFLKAR*LEEFSM
Trigger: CATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTGTCCCCCAAGTAGATaGTGTCAAACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGCPPSR*CQTQTC
Trigger: ACACGTTTGAGTTTGACAGCATCTACTTGGGGGACA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGTCCCCCAAGTAGATaGTGTCAAACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANACPPSR*CQTQTC
Trigger: ACACGTTTGAGTTTGACAGCATCTACTTGGGGGACA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEVMVLT*QASSLL
Trigger: CAAGAGAGAACTTGCCTGGCATGTCAAGACCATCAC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTGTCTGTCTGCCCCTaGTCAAATTTGTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVSVCP*SNLLDL
Trigger: CAAGTCCAACAAATTTGAGCAGGGGCAGACAGACAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAATCAGCATCTGTCCCTaGACCAATTACATCACCAGT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRISICP*TNYITS
Trigger: ACTGGTGATGTAATTGGTGCAGGGACAGATGCTGAT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTATCAGCATCTGTCCCTaGACCAATTACATCACCAGT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAISICP*TNYITS
Trigger: ACTGGTGATGTAATTGGTGCAGGGACAGATGCTGAT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTATCCCTTTGGATTTTaGCATCGTCTTCGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAYPFGF*HRLRPR
Trigger: CCTTGGACGAAGACGATGGCAAAATCCAAAGGGATA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTTCCTGTGGGTCAGCTaGCCCATGGGCTCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVFLWVS*PMGSRC
Trigger: GCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTTGCCTGTGTTGTCGTaGCGAATCCGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLPVLS*RIRILV
Trigger: GACCAAGATTCGGATTCGCCACGACAACACAGGCAA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTATCGCTGTTTGTCTTaGAGGACTTCAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERYRCLS*RTSGGS
Trigger: TGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTATCGCTGTTTGTCTTaGAGGACTTCAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVYRCLS*RTSGGS
Trigger: TGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCGTCTACAAACCAGCCTaGGGCCTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSVYKPA*GLACVV
Trigger: GACAACACAGGCAAGGCCCCAGGCTGGTTTGTAGAC...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp TTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: FCHPQRWQATDRMGKSRSALPKR*GIHLYP
Trigger: TGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGC...AGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp GGTCTTTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAACACAGATACTTCTGCTaGGTGCACACGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: GLFVILRGGKPPIAWESQHRYFC*VHTASQ
Trigger: CTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTG...TTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCACAGATACTTCTGCTaGGTGCACACGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSHRYFC*VHTASQ
Trigger: CTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTG...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGTGAAGATGTCATATaGAACCAGTTCTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: APSANARGFEGLLTAKVESEDVI*NQFSNG
Trigger: ACCATTCGAGAACTGGTTCCATATGACATCTTCACT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGCTCCCGCTCAAACCTaGCTTTCTTTTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFAPAQT*LSFCPA
Trigger: AGCTGGACAAAAAGAAAGCCAGGTTTGAGCGGGAGC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTTCTTCCCTGGCAAGGTaGCCCACACAGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASSSLAR*PTQREA
Trigger: TGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGA...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCAGCAAGTCCCAGCCTaGTCACTACCAGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVQQVPA*SLPAPA
Trigger: CGCTGGAGCTGGTAGTGACCAGGCTGGGACTTGCTG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAAACTTTTGAGCGGCTaGAGAGGAAGAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEKLLSG*RGRALL
Trigger: CAGAAGTGCTCTTCCTCTCCAGCCGCTCAAAAGTTT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCACTTCATACACTCTaGCCTTGTAGTACTCGTGTT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPLHTL*PCSTRV
Trigger: AACACGAGTACTACAAGGCCAGAGTGTATGAAGTGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCTTCAATGACTATCTaGGACAGGAACCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSSMTI*DRNQPA
Trigger: TGCAGGTTGGTTCCTGTCCCAGATAGTCATTGAAGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GCACAATGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AQCPEALLLPCRLAVRTHPASPP*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACGGTGGAGACGCTGG...ATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACATTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCACTGGTGTAGAGGGTaGTCTCGTAAGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFHWCRG*SRKEQM
Trigger: CATTTGTTCCTTACGAGATCACCCTCTACACCAGTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCTGTGAAGATCTGCACCGAGTACAGCACAATGTCCAGAGGCTCTTCTACTTCCCTTCTAACTCTACGATaGAGCGGGAGGCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: PVKICTEYSTMSRGSSTSLLTLR*SGRQTS
Trigger: GGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGAAG...GGAAGTAGAAGAGCCTCTGGACATTGTGCTGTACTCGGTGCAGATCTTCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCTTCCCAGTGGTGACTaGCACATAGTAGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELPSGD*HIVGNN
Trigger: ATTATTCCCTACTATGTGTCAGTCACCACTGGGAAG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCGTTGCCCGTTTCTATaGCGATCTCGTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSRCPFL*RSRRWS
Trigger: AGACCACCTACGAGATCGTCATAGAAACGGGCAACG...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCGATTATGCCGGGTTTaGACCACTTGTTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRLCRV*TTCCWD
Trigger: ATCCCAACAACAAGTGGTTCAAACCCGGCATAATCG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCAAGAAGAACTTGCTTaGTGGTGTCAGATTTATCCC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAQEELA*WCQIYP
Trigger: GGGATAAATCTGACACCATCAAGCAAGTTCTTCTTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTTTTGCCATTTAGCCTaGGGTGTGCTCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERFCHLA*GVLQRE
Trigger: TTCTCTTTGGAGCACACCTCAGGCTAAATGGCAAAA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGCCAGTTGTTGCAGTTaGAGTAGTAACGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFASCCS*SSNGDE
Trigger: CTCATCTCCGTTACTACTTCAACTGCAACAACTGGC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGTCCAGGAACCAGCCTaGTCTGTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTVQEPA*SVACVV
Trigger: GACAACACAGGCAACAGAGCAGGCTGGTTCCTGGAC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp CCTGTGAAGATCTGCACCGAGTACAGCACAATGTCCAGAGGCTCTTCTACTTCCATCATCTTCCTCCACTaGCAGCCAACGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: PVKICTEYSTMSRGSSTSIIFLH*QPTLAW
Trigger: CCATGCCAACGTTGGCTGGCAGTGGAGGAAGATGAT...GGAAGTAGAAGAGCCTCTGGACATTGTGCTGTACTCGGTGCAGATCTTCACAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTAGATTTATCTTTCTaGTCCAGGGCCAGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVDLSF*SRARLS
Trigger: CGACAACCTGGCCCTGGAGCAGAAAGATAAATCTAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTGCTGCAGTTGCTGCTaGGGTCCCCAGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVCCSCC*GPQCTP
Trigger: AGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGGTAGTCCAACCAGATaGGCTTACTACGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEGSPTR*AYYVHH
Trigger: ATGATGAACGTAGTAAGCGCATCTGGTTGGACTACC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGGTAGTCCAACCAGATaGGCTTACTACGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERGSPTR*AYYVHH
Trigger: ATGATGAACGTAGTAAGCGCATCTGGTTGGACTACC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVAHIQA*DVELLH
Trigger: GTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCATGAAGGTGTCGTTCTaGTCCCGCTCAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSMKVSF*SRSNLA
Trigger: AGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCAT...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGACACGTTGGCATCAGTaGCTGCTCCCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVTRWHQ*LLPGCR
Trigger: GCGACATCCTGGGAGCAGGCACTGATGCCAACGTGT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGACACGTTGGCATCAGTaGCTGCTCCCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLTRWHQ*LLPGCR
Trigger: GCGACATCCTGGGAGCAGGCACTGATGCCAACGTGT...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTGTCCCCCAAGTAGATaGTGTCAAACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSECPPSR*CQTQTC
Trigger: ACACGTTTGAGTTTGACAGCATCTACTTGGGGGACA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCCAGGCTCTGGACCTTaGTGGCAAAGCTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVPGSGP*WQSSLS
Trigger: CGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCCAGGCTCTGGACCTTaGTGGCAAAGCTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLPGSGP*WQSSLS
Trigger: CGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGG...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAGACGTTGGCATCAGTaGCTGCCCCTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVRRWHQ*LPLAHS
Trigger: GCTATGAGCCAGGGGCAGGCACTGATGCCAACGTCT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGAATCTTATAAAACCTaGCAAGATCCGGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGESYKT*QDPGAQ
Trigger: TTGAGCTCCCGGATCTTGGCAGGTTTTATAAGATTC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAGAGCACTTCTGTCTTaGCTTTCTCTCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRALLS*LSLHRS
Trigger: AGATCTATGGAGAGAAAGGCAAGACAGAAGTGCTCT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTATCCCTTTGGATTTTaGCATCGTCTTCGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEYPFGF*HRLRPR
Trigger: CCTTGGACGAAGACGATGGCAAAATCCAAAGGGATA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCAGCCAACGTTGGCATaGAAAGTAGTACGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFQPTLA*KVVRDL
Trigger: GAGATCACGTACTACTTTCCATGCCAACGTTGGCTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCATAGGACTCATCCACTaGCAACAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSIGLIH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTAT...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTACCCTCCTCGCTCTGTaGCAGCACATAGGACTCATC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTTLLAL*QHIGLI
Trigger: GATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTALPKR*GIHLYP
Trigger: TGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTCTGTTCCCTCTTGTTaGTACACAGATACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSVPSC*YTDTSA
Trigger: AGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCTGTTCCCTCTTGTTaGTACACAGATACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSVPSC*YTDTSA
Trigger: AGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp TTTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FLSSSEVASHRSHGKVKVKPPIA*ESQGLC
Trigger: GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTT...GACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCATAGTAGGGAATAATTaGGCCCTCTTGAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGIVGNN*ALLNVV
Trigger: GACTACGTTCAAGAGGGCCCAATTATTCCCTACTAT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCGTCGCCTCTGTCCTTaGCCAGCCAGCAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVRRLCP*PASSYS
Trigger: ACTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCGCTCCCGCTCAAACCTaGCTTTCTTTTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVAPAQT*LSFCPA
Trigger: AGCTGGACAAAAAGAAAGCCAGGTTTGAGCGGGAGC...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCTCCATAGTAGAACATaGTCAGGTCTCCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLHSRT*SGLQCS
Trigger: TGAACACTGGAGACCTGACCATGTTCTACTATGGAG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCTCCATAGTAGAACATaGTCAGGTCTCCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERLHSRT*SGLQCS
Trigger: TGAACACTGGAGACCTGACCATGTTCTACTATGGAG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTGCCTGTGTCTCCGTTaGCCCCAAAGATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTCLCLR*PQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAAACTTTTGAGCGGCTaGAGAGGAAGAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFKLLSG*RGRALL
Trigger: CAGAAGTGCTCTTCCTCTCCAGCCGCTCAAAAGTTT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTaGTCACTACTTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLQQVPA*SLLAQL
Trigger: GAGCTGCGCAAGTAGTGACCAGGCTGGGACTTGCTG...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCAGCAAGTCCCAGCCTaGTCACTACTTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASQQVPA*SLLAQL
Trigger: GAGCTGCGCAAGTAGTGACCAGGCTGGGACTTGCTG...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCCACTTCATACACTCTaGCCTTGTAGTACTCGTGTT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEPLHTL*PCSTRV
Trigger: AACACGAGTACTACAAGGCCAGAGTGTATGAAGTGG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCTTTCATGTGTGTACAGCCTCGTCTaGAGCTCTGCATGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PEALLLPCRLAVRTHLSCVYSLV*SSAWKR
Trigger: CCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACAC...ACATGAAAGATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGTTGGTCCGGTTCTCTaGCTTGCCAAGGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVVGPVL*LAKVSL
Trigger: GAGCGATACCTTGGCAAGTCAGAGAACCGGACCAAC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCGAAGACACGGGAGGTaGTGCCGTCGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASRRHGR*CRRLCP
Trigger: AGGACAGAGGCGACGGCATCACCTCCCGTGTCTTCG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASSCPPG*ARRSPW
Trigger: CCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGTTCAAAGTAGTCTTTaGGGTTGTTGTCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAVQSSL*GCCQRQ
Trigger: TTGTCTCTGACAACAACCTCAAAGACTACTTTGAAC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACACCAGTGTATACCTTaGCTTCATACTTATTACCTC +
Preference number: 4 (lower is better)
Translates to: SANARGFEGLLTAKVEGRHQCIP*LHTYYL
Trigger: GAGGTAATAAGTATGAAGTCAAGGTATACACTGGTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCCCATGGGCTCTAGGTaGTGGGGCCCTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASPMGSR*WGPACN
Trigger: ATTGCAGGCAGGGCCCCAGCACCTAGAGCCCATGGG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGACCAGCCTGCTCTGTTaGCTGTGTTGTCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVTSLLC*LCCRGE
Trigger: TTCGCCACGACAACACAGGCAACAGAGCAGGCTGGT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCACAGGGAAACGTCATaGACTTCCCAAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTHRETS*TSQEMG
Trigger: CCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCCTCGTCTGAAGCTCTaGATGGAAGAGGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSPRLKL*MEEVSD
Trigger: ATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGG...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp TTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTGCCACCCAGGATTCATaGCCGTGTTATTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: FCHPQRWQATDRMGKSRSATQDS*PCYYGQ
Trigger: TTGGCCATAATAACACGGGCATGAATCCTGGGTGGC...AGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCTTCCCTGTGAAGATCTaGACCGAGTACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVFPVKI*TEYSTM
Trigger: CATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAA...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCTCCACGTACCAGTCTaGGCACCACTTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVLHVPV*APLGVV
Trigger: GACAACTCCAAGTGGTGCGCAGACTGGTACGTGGAG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCTCCACGTACCAGTCTaGGCACCACTTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASLHVPV*APLGVV
Trigger: GACAACTCCAAGTGGTGCGCAGACTGGTACGTGGAG...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTCAGCAGGGCTGCTaGAGTTGCTGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASSQQGC*SCCCGP
Trigger: GGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACCACTCCGGCCGACTaGCCAGGCCATCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQTTPAD*PGHQSG
Trigger: TCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASVAGLN*DGVGGP
Trigger: TGGACCTCCTACACCGTCGCAGTTAAGACCAGCGAC...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTGTCCCCCAAGTAGATaGTGTCAAACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFCPPSR*CQTQTC
Trigger: ACACGTTTGAGTTTGACAGCATCTACTTGGGGGACA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGCTTCAGCTCCCGCTTaGCTGTGTCTCCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCASAPA*LCLRWP
Trigger: GGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGCTTCAGCTCCCGCTTaGCTGTGTCTCCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASASAPA*LCLRWP
Trigger: GGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTTCTCATCCACACTCTaGAGCAAGTCCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTFSSTL*SKSQPG
Trigger: ACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGTCATCCTTTCTAAATaGCATCCAGAACCAGAACTC +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEVILSK*HPEPEL
Trigger: GAGTTCTGGTTCTGGATGGCATTTAGAAAGGATGAC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGAGCACTTCTGTCTTaGCTTTCTCTCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERALLS*LSLHRS
Trigger: AGATCTATGGAGAGAAAGGCAAGACAGAAGTGCTCT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGACCCTCCTCGCTCTGTaGCAGCACATAGGACTCATC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVTLLAL*QHIGLI
Trigger: GATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTTGCCTGTGTTGTCATaGCCAAGCCGGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTLPVLS*PSRTFH
Trigger: GTGGAAAGTCCGGCTTGGCCATGACAACACAGGCAA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CAATGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCTTGTCTACAAACCAGCCTaGGGCCTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: QCPEALLLPCRLAVRTHLVYKPA*GLACVV
Trigger: GACAACACAGGCAAGGCCCCAGGCTGGTTTGTAGAC...AAGATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CAATGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCTTTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATG +
Preference number: 4 (lower is better)
Translates to: QCPEALLLPCRLAVRTHLCHPQR*QATDRM
Trigger: CATGCGATCGGTGGCTTGCCACCTCTGAGGATGACA...AAGATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGAACCAGTTCTCGAATaGTCTTTTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEEPVLE*SFCHPQ
Trigger: CTGAGGATGACAAAAAGACCATTCGAGAACTGGTTC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGAACCAGTTCTCGAATaGTCTTTTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSEREPVLE*SFCHPQ
Trigger: CTGAGGATGACAAAAAGACCATTCGAGAACTGGTTC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGTGAAGATGTCATATaGAACCAGTTCTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASEDVI*NQFSNG
Trigger: ACCATTCGAGAACTGGTTCCATATGACATCTTCACT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTAGTCTGCGCACCACTTaGAGTTGTCATGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASSLRTT*SCHGGA
Trigger: AGCTCCGCCATGACAACTCCAAGTGGTGCGCAGACT...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCGGAACTCGTCCTCGTTaGTGTCATTCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSGTRPR*CHSRSP
Trigger: TGGAGATCTGGAATGACACCAACGAGGACGAGTTCC...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGATAGTAGGGAATAATTaGGCCCTCTTGAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERIVGNN*ALLNVV
Trigger: GACTACGTTCAAGAGGGCCCAATTATTCCCTACTAT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGGCTCGGCTGTCAGTaGCCGCGTCCTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQRLGCQ*PRPCAS
Trigger: GGAAGCACAAGGACGCGGCCACTGACAGCCGAGCCT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGGGCTCTGGACCTTGCTaGCAAAGCTCTCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLGSGPC*QSSLSS
Trigger: AGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCC...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGATCAGTGCCTGCCCCTaGCTCATAGCCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVISACP*LIACCH
Trigger: GTGACAACAGGCTATGAGCCAGGGGCAGGCACTGAT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTTGCCTGTGTCTCCGTTaGCCCCAAAGATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASCLCLR*PQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCA...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp AGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGACCTGATGAGTTTCTaGCAGAGGTCAGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSRMVFLSSSEVASHRSHDLMSF*QRSDSR
Trigger: CCTGGAGTCTGACCTCTGCCAGAAACTCATCAGGTC...ATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAGTCTTTATGGTCACTaGGAATGTGGTAGATTTATC +
Preference number: 4 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSLYGH*ECGRFI
Trigger: GATAAATCTACCACATTCTCAGTGACCATAAAGACT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGTCTTTATGGTCACTaGGAATGTGGTAGATTTATC +
Preference number: 4 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASLYGH*ECGRFI
Trigger: GATAAATCTACCACATTCTCAGTGACCATAAAGACT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRLRMST*EQCHPG
Trigger: TCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGGTCTCCATAGATGGTaGTGTACACCTTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVGLHRW*CTPWHP
Trigger: CGGATGCCAAGGTGTACATCACCATCTATGGAGACC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGCCCGGTCACTGTGCTaGTGTCGACATCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCARSLC*CRHRPS
Trigger: AGATGGCCGATGTCGACATCAGCACAGTGACCGGGC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGGATCCGCATCTTGGTaGATGGAGCAATGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTGSASW*MEQCLG
Trigger: TCCTAGACATTGCTCCATTCACCAAGATGCGGATCC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCAAGAAGAACTTGCTTaGTGGTGTCAGATTTATCCC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFQEELA*WCQIYP
Trigger: GGGATAAATCTGACACCATCAAGCAAGTTCTTCTTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTTCAAAGTAGTCTTTaGGGTTGTTGTCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVQSSL*GCCQRQ
Trigger: TTGTCTCTGACAACAACCTCAAAGACTACTTTGAAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCCATGATGTTCACTTaGGATTGGGGTTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSMMFT*DWGFAI
Trigger: AATGGCAAAACCCCAATCTCAAGTGAACATCATGGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR TCA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCATGATGTTCACTTaGGATTGGGGTTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWSMMFT*DWGFAI
Trigger: AATGGCAAAACCCCAATCTCAAGTGAACATCATGGA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR TCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCACCAGTGTATACCTTaGCTTCATACTTATTACCTC +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVHQCIP*LHTYYL
Trigger: GAGGTAATAAGTATGAAGTCAAGGTATACACTGGTG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR TCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGGCAGCCACAGATTATaGCACATGCTAATTATTATC +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERGSHRL*HMLIII
Trigger: GATAATAATTAGCATGTGTCATAATCTGTGGCTGCC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000582408.6
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTAAGTGCCTCAGCATCTaGCACTCAACGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTKCLSI*HSTPFS
Trigger: AGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCGTAGATTTATCTTTCTaGTCCAGGGCCAGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSVDLSF*SRARLS
Trigger: CGACAACCTGGCCCTGGAGCAGAAAGATAAATCTAC...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGCCACCCAGGATTCATaGCCGTGTTATTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTATQDS*PCYYGQ
Trigger: TTGGCCATAATAACACGGGCATGAATCCTGGGTGGC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAACCACTCCGGCCGACTaGCCAGGCCATCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRTTPAD*PGHQSG
Trigger: TCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTKLVPV*RLLQGQ
Trigger: CTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGCCAGACCCTCAGCTTaGAGAGGTGGCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASARPSA*RGGPSS
Trigger: TGAGCTTGGGCCACCTCTGCAAGCTGAGGGTCTGGC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCKSRTV*PSPSLL
Trigger: CAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCTGTCCCCCAAGTAGATaGTGTCAAACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVCPPSR*CQTQTC
Trigger: ACACGTTTGAGTTTGACAGCATCTACTTGGGGGACA...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCRSGLC*PARRGC
Trigger: GCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASRSGLC*PARRGC
Trigger: GCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASGRSGL*CPARRG
Trigger: ACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKGRSGL*CPARRG
Trigger: ACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCTGCTCTTCCTGGTGTaGCTTCACCAAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLLFLV*LHQAPT
Trigger: GGTGGGGGCTTGGTGAAGGCACACCAGGAAGAGCAG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGATAGGACTCATCCACTaGCAACAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVIGLIH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTAT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGTGAAGATGTCATATaGAACCAGTTCTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSEDVI*NQFSNG
Trigger: ACCATTCGAGAACTGGTTCCATATGACATCTTCACT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCTCTCTCGAACTTGTTaGTCCGGTTCTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTLSRTC*SGSLTC
Trigger: GCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGGAACTCGTCCTCGTTaGTGTCATTCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTGTRPR*CHSRSP
Trigger: TGGAGATCTGGAATGACACCAACGAGGACGAGTTCC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCGACATCGGCCATCTTaGAGCTCAGGGCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCRHRPS*SSGRSP
Trigger: GGGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCGACATCGGCCATCTTaGAGCTCAGGGCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQRHRPS*SSGRSP
Trigger: GGGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTATAGTAGGGAATAATTaGGCCCTCTTGAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFIVGNN*ALLNVV
Trigger: GACTACGTTCAAGAGGGCCCAATTATTCCCTACTAT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAGTTCAACATGTACTTaGTGCCCTGGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVSSTCT*CPGWAL
Trigger: CAGTGCCCACCCAGGGCACCAAGTACATGTTGAACT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTHRSCC*HRQSRG
Trigger: TCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCGTTGGCCCCAAAGATaGTCACGAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASRWPQR*SRRRWH
Trigger: ATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACG...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCTTTCAGCTGCAAGGGGAAGCTaGGGATGTTCACAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: CPEALLLPCRLAVRTHLSAARGS*GCSQFV
Trigger: GACAAACTGTGAACATCCCCAGCTTCCCCTTGCAGC...TGAAAGATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGTGACTGTCAGAAACTaGAGACGGATTTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVVTVRN*RRICPP
Trigger: TGGTGGGCAAATCCGTCTTCAGTTTCTGACAGTCAC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR TCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLRMST*EQCHPG
Trigger: TCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp GTATTTCTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCCTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: VFLSEDVIWNQFSNGLFVLRMST*EQCHPG
Trigger: TCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAG...GACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTGCATGTCAGGGAAGTTaGATGTGTCCGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASACQGS*MCPCCS
Trigger: GGAACAACACGGACACATTCAACTTCCCTGACATGC...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp GTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCAAGTGGAAAGTAGTACCCTaGTGGAGCTGCAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VIWNQFSNGLFVILRGGKWKVVP*WSCKGK
Trigger: CTTCCCCTTGCAGCTCCATCAGGGTACTACTTTCCA...CTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCTTTCATGTGCTTGGCCAACATGGTaGAACCCCATCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: PEALLLPCRLAVRTHLSCAWPTW*NPISSL
Trigger: AAGACTAGAGATGGGGTTTCACCATGTTGGCCAAGC...ACATGAAAGATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGGCAGCCACAGATTATaGCACATGCTAATTATTATC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFGSHRL*HMLIII
Trigger: GATAATAATTAGCATGTGTCATAATCTGTGGCTGCC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000582408.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGCACACACTGCTCCATaGACGGGAGGAAGCAGACCA +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASAHTAP*TGGSRP
Trigger: TGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp ACAGCACAATGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCGTAGATTTATCTTTCTaGTCCAGGGCCAGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: TAQCPEALLLPCRLAVRTVDLSF*SRARLS
Trigger: CGACAACCTGGCCCTGGAGCAGAAAGATAAATCTAC...GGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACATTGTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASTSLGP*LCCHGQ
Trigger: TTGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATATCCGGGAGGAGCCTaGGGATGTCCACGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRYPGGA*GCPRES
Trigger: GCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGAGAAGTCAGCAGGGCTaGTGCAGTTGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKRSQQG*CSCCCG
Trigger: ACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCT...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGATGTTGGAGTCAGTaGCCCCGCCAACCACATCCC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQRCWSQ*PRQPHP
Trigger: GGGATGTGGTTGGCGGGGGCACTGACTCCAACATCT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGTTGGAGTCAGTaGCCCCGCCAACCACATCCC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASRCWSQ*PRQPHP
Trigger: GGGATGTGGTTGGCGGGGGCACTGACTCCAACATCT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGTTGGCATCAGTGCCTaGTCCCAGGATGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCVGISA*SQDVAG
Trigger: ACCAGCGACATCCTGGGAGCAGGCACTGATGCCAAC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCTTCCTAAAGGCCCGCTaGCTAGAAGAATTTTCCATG +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSFLKAR*LEEFSM
Trigger: CATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAA...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGACGTTGGCATCAGTaGCTGCCCCTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQRRWHQ*LPLAHS
Trigger: GCTATGAGCCAGGGGCAGGCACTGATGCCAACGTCT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGAGACAAGAAGAACTTaGTTGATGGTGTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVETRRT*LMVSDL
Trigger: TAAATCTGACACCATCAAGCAAGTTCTTCTTGTCTC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGAGACAAGAAGAACTTaGTTGATGGTGTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERETRRT*LMVSDL
Trigger: TAAATCTGACACCATCAAGCAAGTTCTTCTTGTCTC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR GCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATGCTCCAGGCGCACCTTaGGCAGCTCACCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNAPGAP*AAHPAP
Trigger: TGGAGCTGGGTGAGCTGCGCAAGGTGCGCCTGGAGC...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCATGGGCTCTAGGTGCTaGGGCCCTGCCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASMGSRC*GPACNS
Trigger: AGAATTGCAGGCAGGGCCCCAGCACCTAGAGCCCAT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTTGCCTGTGTTGTCGTaGCGAATCCGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVLPVLS*RIRILV
Trigger: GACCAAGATTCGGATTCGCCACGACAACACAGGCAA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACGTCGTCTTCGTTTTTaGCCAGCCAGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRRRLRF*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCTCGTAAGGAACAAATaGTGTGTACAGCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTLVRNK*CVQPRL
Trigger: CAGACGAGGCTGTACACACCATTTGTTCCTTACGAG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCTCTGTTCCCTCTTGTTaGTACACAGATACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGEDSISHPHSAASPSLVSVPSC*YTDTSA
Trigger: AGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGA...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAGGCTCGGCTGTCAGTaGCCGCGTCCTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRRLGCQ*PRPCAS
Trigger: GGAAGCACAAGGACGCGGCCACTGACAGCCGAGCCT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCAGTCACACTGGAAGTaGAAGGTCTCGTCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASQSHWK*KVSSRE
Trigger: CTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCAGTCACACTGGAAGTaGAAGGTCTCGTCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQQSHWK*KVSSRE
Trigger: CTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTCACACTGGAAGTaGAAGGTCTCGTCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKQSHWK*KVSSRE
Trigger: CTCCCGCGACGAGACCTTCCACTTCCAGTGTGACTG...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGCCAGACGTTCTCCCTaGTTTCGCCTCCGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRARRSP*FRLRCP
Trigger: CGGGCAACGGAGGCGAAACCAGGGAGAACGTCTGGC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCTCCACTTCTATCCCCTaGGTGAAGACTCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSSTSIP*VKTQFL
Trigger: GAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGA...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGACTGCCTCAATCCACTaGAGAAGTGAGACAATCCCC +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLTASIH*RSETIP
Trigger: GGGGATTGTCTCACTTCTCCAGTGGATTGAGGCAGT...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR TCA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAGTCTTTATGGTCACTaGGAATGTGGTAGATTTATC +
Preference number: 4 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSLYGH*ECGRFI
Trigger: GATAAATCTACCACATTCTCAGTGACCATAAAGACT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR TCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGTGTACAGCCTCGTCTaGAGCTCTGCATGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCVYSLV*SSAWKR
Trigger: CCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACAC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCACTGGTGTAGAGGGTaGTCTCGTAAGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVHWCRG*SRKEQM
Trigger: CATTTGTTCCTTACGAGATCACCCTCTACACCAGTG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCACTGGTGTAGAGGGTaGTCTCGTAAGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: HFYPLGEDSISHPHSAASHWCRG*SRKEQM
Trigger: CATTTGTTCCTTACGAGATCACCCTCTACACCAGTG...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR TCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCTTCTATCCCCTGGGTaGAGACTCAATTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLLLSPG*RLNFSS
Trigger: GGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAG...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTTTTGCCATTTAGCCTaGGGTGTGCTCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTFCHLA*GVLQRE
Trigger: TTCTCTTTGGAGCACACCTCAGGCTAAATGGCAAAA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR TCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAATCCACTGGAGAAGTaGGACAATCCCCTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVNPLEK*DNPLVP
Trigger: TGGAACTAGGGGATTGTCTCACTTCTCCAGTGGATT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR TCA 90 bp AGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCCCATAAAGATGGCATaGCTTGTCCAGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: RCHMEPVLEWSFCHPQRWPIKMA*LVQGDL
Trigger: CAGGTCACCCTGGACAAGTCATGCCATCTTTATGGG...CCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGATACTTCTGCTGGGTaGACACGGCATCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCDTSAG*TRHRSH
Trigger: ATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTCCGGTTCTCTGACTTaGCAAGGTATCGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCSGSLT*QGIAPQ
Trigger: CTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGA...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGGCTGCTGCAGTTGCTaGTGCGGTCCCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRGCCSC*CGPQCT
Trigger: AGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAAGAAGTCAGCAGGGCTaGTGCAGTTGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRRSQQG*CSCCCG
Trigger: ACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRAHIQA*DVELLH
Trigger: GTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTCAACATGTACTTGGTaGCCTGGGTGGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASSTCTW*PGWALP
Trigger: TGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQVAGLN*DGVGGP
Trigger: TGGACCTCCTACACCGTCGCAGTTAAGACCAGCGAC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKVAGLN*DGVGGP
Trigger: TGGACCTCCTACACCGTCGCAGTTAAGACCAGCGAC...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAACACGTTGGCATCAGTaGCTGCTCCCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRTRWHQ*LLPGCR
Trigger: GCGACATCCTGGGAGCAGGCACTGATGCCAACGTGT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQFQFAD*FRASVP
Trigger: TGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTTCCTAAAGGCCCGCTaGCTAGAAGAATTTTCCATG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTFLKAR*LEEFSM
Trigger: CATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLVMVLT*QASSLL
Trigger: CAAGAGAGAACTTGCCTGGCATGTCAAGACCATCAC...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGTTGGCATCAGTGCCTaGCCCTGGCTCATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRVGISA*PWLIAC
Trigger: ACAGGCTATGAGCCAGGGGCAGGCACTGATGCCAAC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAAGACGTTGGCATCAGTaGCTGCCCCTGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRRRWHQ*LPLAHS
Trigger: GCTATGAGCCAGGGGCAGGCACTGATGCCAACGTCT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRRSGLC*PARRGC
Trigger: GCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCTGTCTGCTATGAGCTaGTGCTGTGCAAATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVLSAMS*CCANPK
Trigger: CTTTGGATTTGCACAGCACCAGCTCATAGCAGACAG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCAGCCAACGTTGGCATaGAAAGTAGTACGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVQPTLA*KVVRDL
Trigger: GAGATCACGTACTACTTTCCATGCCAACGTTGGCTG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGCTCCCTGGACAGCTaGCCATCATCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQSSLDS*PSSSST
Trigger: AGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGCTCCCTGGACAGCTaGCCATCATCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LSEDVIWNQFSNGLFVILSSLDS*PSSSST
Trigger: AGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCT...GAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp TGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCAATTGCCTGTGTTGTCATaGCCAAGCCGGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CHMEPVLEWSFCHPQRWQLPVLS*PSRTFH
Trigger: GTGGAAAGTCCGGCTTGGCCATGACAACACAGGCAA...TTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATG +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASCHPQR*QATDRM
Trigger: CATGCGATCGGTGGCTTGCCACCTCTGAGGATGACA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGTCTGCGCACCACTTaGAGTTGTCATGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQSLRTT*SCHGGA
Trigger: AGCTCCGCCATGACAACTCCAAGTGGTGCGCAGACT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCATGTACTTGGTGCCCTaGGTGGGCACTGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASMYLVP*VGTAKH
Trigger: GTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACAT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCATGTACTTGGTGCCCTaGGTGGGCACTGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCMYLVP*VGTAKH
Trigger: GTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACAT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTCAGCTTGCAGAGGTaGCCCAAGCTCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKLSLQR*PKLSMS
Trigger: TGACATGCTGAGCTTGGGCCACCTCTGCAAGCTGAG...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCGTCACCCTCACTCTTaGAGAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQRHPHS*RASSHT
Trigger: AGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATGCCAGACGTTCTCCCTaGTTTCGCCTCCGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNARRSP*FRLRCP
Trigger: CGGGCAACGGAGGCGAAACCAGGGAGAACGTCTGGC...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATCTTCCCTGGCAAGGTaGCCCACACAGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRSSLAR*PTQREA
Trigger: TGCCTCCCTCTGTGTGGGCCACCTTGCCAGGGAAGA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGGCTCTGGACCTTGCTaGCAAAGCTCTCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASGSGPC*QSSLSS
Trigger: AGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCATCAGTGCCTGCCCCTaGCTCATAGCCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASISACP*LIACCH
Trigger: GTGACAACAGGCTATGAGCCAGGGGCAGGCACTGAT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTGCCTGTGTCTCCGTTaGCCCCAAAGATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASCLCLR*PQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGGTGTCTGTCTGCTATaGGCTGGTGCTGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQGVCLL*AGAVQI
Trigger: GATTTGCACAGCACCAGCTCATAGCAGACAGACACC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR TCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTATGGAAAGTAGTACGTaGTCTCGTTGTTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTMESST*SRCSCQ
Trigger: CTGACATGAACAACGAGATCACGTACTACTTTCCAT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR TCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCTTCTAACTCTACGATaGAGCGGGAGGCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASLLTLR*SGRQTS
Trigger: GGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGAAG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGGTCTCCATAGATGGTaGTGTACACCTTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQGLHRW*CTPWHP
Trigger: CGGATGCCAAGGTGTACATCACCATCTATGGAGACC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGTTGGTCCGGTTCTCTaGCTTGCCAAGGTATCGCTC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRVGPVL*LAKVSL
Trigger: GAGCGATACCTTGGCAAGTCAGAGAACCGGACCAAC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCGTTGCCCGTTTCTATaGCGATCTCGTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQRCPFL*RSRRWS
Trigger: AGACCACCTACGAGATCGTCATAGAAACGGGCAACG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATCATCTTCCTCCACTaGCAGCCAACGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQIIFLH*QPTLAW
Trigger: CCATGCCAACGTTGGCTGGCAGTGGAGGAAGATGAT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCACAGGGAAACGTCATaGACTTCCCAAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASHRETS*TSQEMG
Trigger: CCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAGATGTTGGAGTCAGTaGCCCCGCCAACCACATCCC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRRCWSQ*PRQPHP
Trigger: GGGATGTGGTTGGCGGGGGCACTGACTCCAACATCT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGAAGGTGTCGTTCTaGTCCCGCTCAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQMKVSF*SRSNLA
Trigger: AGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCAT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCATGAAGGTGTCGTTCTaGTCCCGCTCAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCMKVSF*SRSNLA
Trigger: AGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCAT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTGTCCCCCAAGTAGATaGTGTCAAACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVCPPSR*CQTQTC
Trigger: ACACGTTTGAGTTTGACAGCATCTACTTGGGGGACA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGTTGGCATCAGTGCCTaGCCCTGGCTCATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRVGISA*PWLIAC
Trigger: ACAGGCTATGAGCCAGGGGCAGGCACTGATGCCAAC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCRLRIF*FSSRLP
Trigger: AGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCPARRG*AFSASA
Trigger: AGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASPARRG*AFSASA
Trigger: AGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQPARRG*AFSASA
Trigger: AGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCTTTCAGAAAGTCAAGGTCTCTaGACCCTGATGTCAGGATTT +
Preference number: 4 (lower is better)
Translates to: CPEALLLPCRLAVRTHLSESQGL*TLMSGF
Trigger: AAATCCTGACATCAGGGTGCAGAGACCTTGACTTTC...TGAAAGATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGGCGAATCCGAATCTTaGTCAGGGCCCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRGESES*SGPPGQ
Trigger: TTGACCTGGGGGCCCTGACCAAGATTCGGATTCGCC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACACAGATACTTCTGCTaGGTGCACACGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRHRYFC*VHTASQ
Trigger: CTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCAGTGAAGATGTCATATaGAACCAGTTCTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: YPLGEDSISHPHSAASPSSEDVI*NQFSNG
Trigger: ACCATTCGAGAACTGGTTCCATATGACATCTTCACT...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTATAGTAGGGAATAATTaGGCCCTCTTGAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTIVGNN*ALLNVV
Trigger: GACTACGTTCAAGAGGGCCCAATTATTCCCTACTAT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACGTCACCCTCACTCTTaGAGAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRRHPHS*RASSHT
Trigger: AGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGGCTCTGGACCTTGCTaGCAAAGCTCTCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRGSGPC*QSSLSS
Trigger: AGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAATCAGTGCCTGCCCCTaGCTCATAGCCTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRISACP*LIACCH
Trigger: GTGACAACAGGCTATGAGCCAGGGGCAGGCACTGAT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCGTTGGCCCCAAAGATaGTCACGAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQRWPQR*SRRRWH
Trigger: ATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTCCACTTCTATCCCCTaGGTGAAGACTCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVSTSIP*VKTQFL
Trigger: GAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
3UTR CAA 72 bp AAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCAAGCCACCGATCGCAT +
Preference number: 4 (lower is better)
Translates to: KMSYGTSSRMVF*SSSEVASHRSH
Trigger: ATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRPASPP*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACGGTGGAGACGCTGG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGTGTACAGCCTCGTCTaGAGCTCTGCATGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRVYSLV*SSAWKR
Trigger: CCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACAC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp ATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCACACTGGTGTAGAGGGTaGTCTCGTAAGGAACAAATG +
Preference number: 4 (lower is better)
Translates to: MSYGTSSRMVFLSSSEVAHWCRG*SRKEQM
Trigger: CATTTGTTCCTTACGAGATCACCCTCTACACCAGTG...TGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCAGGAATGTTCCCTGTaGAGATCTGCACCGAGTACA +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCQECSL*RSAPST
Trigger: TGTACTCGGTGCAGATCTTCACAGGGAACATTCCTG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGGGATCCGCATCTTGGTaGATGGAGCAATGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKGSASW*MEQCLG
Trigger: TCCTAGACATTGCTCCATTCACCAAGATGCGGATCC...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGGATCCGCATCTTGGTaGATGGAGCAATGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQGSASW*MEQCLG
Trigger: TCCTAGACATTGCTCCATTCACCAAGATGCGGATCC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACGTTGCCCGTTTCTATaGCGATCTCGTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRRCPFL*RSRRWS
Trigger: AGACCACCTACGAGATCGTCATAGAAACGGGCAACG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGTGAATGCACACACTaGTCCATGCACGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRCECTH*SMHGRK
Trigger: CTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNTSLGP*LCCHGQ
Trigger: TTGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR GCA 90 bp ACTTGCCGTAAGGACCCATCTTTCATGTATTTCTCAGTGAAGATGTCATATGGACACAGGGAAACGTCATaGACTTCCCAAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: TCRKDPSFMYFSVKMSYGHRETS*TSQEMG
Trigger: CCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTG...TCCATATGACATCTTCACTGAGAAATACATGAAAGATGGGTCCTTACGGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp CCATCTTTCATGTATTTCTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGATACTTCTGCTGGGTaGACACGGCATCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSFMYFSVKMSYGTSSRMDTSAG*TRHRSH
Trigger: ATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATC...CATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAAATACATGAAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRFQFAD*FRASVP
Trigger: TGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCKLVPV*RLLQGQ
Trigger: CTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATTCTCATCCACACTCTaGAGCAAGTCCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRFSSTL*SKSQPG
Trigger: ACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGAACAGAGGGAGCACTaGCTCAATCCACTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASREQREH*LNPLEK
Trigger: CTTCTCCAGTGGATTGAGGCAGTGCTCCCTCTGTTC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR GCA 90 bp TTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCCTTTCCAAGCTTAAATaGCTTGGATTTTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: FVILRGGKPPIAWESQGLLSKLK*LGFSEH
Trigger: ATGTTCTGAAAATCCAAGGCATTTAAGCTTGGAAAG...GAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp GTATTTCTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCACCCTCCTCGCTCTGTaGCAGCACATAGGACTCATC +
Preference number: 4 (lower is better)
Translates to: VFLSEDVIWNQFSNGLFVTLLAL*QHIGLI
Trigger: GATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGT...GACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGTCTACAAACCAGCCTaGGGCCTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRVYKPA*GLACVV
Trigger: GACAACACAGGCAAGGCCCCAGGCTGGTTTGTAGAC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp ACAGCACAATGTCCAGAGGCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCAGTGAAGATGTCATATaGAACCAGTTCTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: TAQCPEALLLPCRLAVRTSEDVI*NQFSNG
Trigger: ACCATTCGAGAACTGGTTCCATATGACATCTTCACT...GGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGCCTCTGGACATTGTGCTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTCTCTCGAACTTGTTaGTCCGGTTCTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKLSRTC*SGSLTC
Trigger: GCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAG...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAAGTTCAACATGTACTTaGTGCCCTGGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRSSTCT*CPGWAL
Trigger: CAGTGCCCACCCAGGGCACCAAGTACATGTTGAACT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGCTCCCGCTCAAACCTaGCTTTCTTTTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCAPAQT*LSFCPA
Trigger: AGCTGGACAAAAAGAAAGCCAGGTTTGAGCGGGAGC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGCTCCCGCTCAAACCTaGCTTTCTTTTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQAPAQT*LSFCPA
Trigger: AGCTGGACAAAAAGAAAGCCAGGTTTGAGCGGGAGC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACTCAGCTTGCAGAGGTaGCCCAAGCTCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLSLQR*PKLSMS
Trigger: TGACATGCTGAGCTTGGGCCACCTCTGCAAGCTGAG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASHRSCC*HRQSRG
Trigger: TCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACGTTGGCCCCAAAGATaGTCACGAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRRWPQR*SRRRWH
Trigger: ATGCCAACGTCTTCGTGACCATCTTTGGGGCCAACG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCTTGTCCCCAGCCTCATaGTTCTGTGGCACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSEDVIWNQFSNGLFVILLSPAS*FCGTFS
Trigger: GGAAAAAGTGCCACAGAACCATGAGGCTGGGGACAA...GAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCAGCCAACGTTGGCATaGAAAGTAGTACCCTCGGAT +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASQPTLA*KVVPSD
Trigger: ATCCGAGGGTACTACTTTCCATGCCAACGTTGGCTG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR TCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCAATGGCATAGATGGTaGAGGTGTCTGTCTGCTATG +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCQWHRW*RCLSAM
Trigger: CATAGCAGACAGACACCTTCACCATCTATGCCATTG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR TCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACTTCTAACTCTACGATaGAGCGGGAGGCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLLTLR*SGRQTS
Trigger: GGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGAAG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGCATGTCAGGGAAGTTaGATGTGTCCGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRACQGS*MCPCCS
Trigger: GGAACAACACGGACACATTCAACTTCCCTGACATGC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTAAGCAGATGCTAAGATaGGTTCTTTATAGGATATGG +
Preference number: 4 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTKQMLR*VLYRIW
Trigger: CCATATCCTATAAAGAACTCATCTTAGCATCTGCTT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACCTCGTCTGAAGCTCTaGATGGAAGAGGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRPRLKL*MEEVSD
Trigger: ATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGTACACAGATACTTCTaGTGGGTGCACACGGCATCG +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRVHRYF*WVHTAS
Trigger: CGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTAC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGCCACCCAGGATTCATaGCCGTGTTATTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRATQDS*PCYYGQ
Trigger: TTGGCCATAATAACACGGGCATGAATCCTGGGTGGC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTTCCCTGTGAAGATCTaGACCGAGTACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQFPVKI*TEYSTM
Trigger: CATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRKLVPV*RLLQGQ
Trigger: CTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQVMVLT*QASSLL
Trigger: CAAGAGAGAACTTGCCTGGCATGTCAAGACCATCAC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKVMVLT*QASSLL
Trigger: CAAGAGAGAACTTGCCTGGCATGTCAAGACCATCAC...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRRLRIF*FSSRLP
Trigger: AGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACATCTTGATGGCCTCTaGTTCTCCACTTCTATCCCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRHLDGL*FSTSIP
Trigger: GGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGTGAAGAGGGCCATATaGATCACACCATGTGAATGC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQVKRAI*ITPCEC
Trigger: GCATTCACATGGTGTGATCCATATGGCCCTCTTCAC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATAGCTCCCTGGACAGCTaGCCATCATCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNSSLDS*PSSSST
Trigger: AGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCT...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CCA 90 bp GTATTTCTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATAGGACTCATCCACTaGCAACAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: VFLSEDVIWNQFSNGLFVIGLIH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTAT...GACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTATCGCTGTTTGTCTTaGAGGACTTCAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASYRCLS*RTSGGS
Trigger: TGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCTATCGCTGTTTGTCTTaGAGGACTTCAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSEDVIWNQFSNGLFVILYRCLS*RTSGGS
Trigger: TGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATA...GAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTATCGCTGTTTGTCTTaGAGGACTTCAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQYRCLS*RTSGGS
Trigger: TGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp GCTCTTCTACTTCCTTGTAGACTTGCCGTAAGGACCCATCTTTCATGTATTTCTCTCGTAAGGAACAAATaGTGTGTACAGCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ALLLPCRLAVRTHLSCISLVRNK*CVQPRL
Trigger: CAGACGAGGCTGTACACACCATTTGTTCCTTACGAG...AGAAATACATGAAAGATGGGTCCTTACGGCAAGTCTACAAGGAAGTAGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCTCGTAAGGAACAAATaGTGTGTACAGCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLVRNK*CVQPRL
Trigger: CAGACGAGGCTGTACACACCATTTGTTCCTTACGAG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp GTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCAAGTCTGTTCCCTCTTGTTaGTACACAGATACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VIWNQFSNGLFVILRGGKSVPSC*YTDTSA
Trigger: AGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGA...CTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRKPPIA*ESQGLC
Trigger: GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCAATGTTCACCACCATaGCATCCAAGAGGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQQCSPP*HPRGRR
Trigger: TCTTCGACCTCTTGGATGCCATGGTGGTGAACATTG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCTCAGCTTGCAGAGGTaGCCCAAGCTCAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNLSLQR*PKLSMS
Trigger: TGACATGCTGAGCTTGGGCCACCTCTGCAAGCTGAG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR TCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAATGGATCACACCATGTaGATGCACACACTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRMDHTM*MHTLLH
Trigger: ATGGAGCAGTGTGTGCATTCACATGGTGTGATCCAT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR TCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCTTCTAACTCTACGATaGAGCGGGAGGCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNLLTLR*SGRQTS
Trigger: GGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGAAG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR TCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCTTCCCAGTGGTGACTaGCACATAGTAGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLPSGD*HIVGNN
Trigger: ATTATTCCCTACTATGTGTCAGTCACCACTGGGAAG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCGTTGCCCGTTTCTATaGCGATCTCGTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNRCPFL*RSRRWS
Trigger: AGACCACCTACGAGATCGTCATAGAAACGGGCAACG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR TCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACTTCTATCCCCTGGGTaGAGACTCAATTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRLLSPG*RLNFSS
Trigger: GGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR GCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTATGAGCTGGTGCTGTaGAAATCCAAAGTGACTGTC +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASYELVL*KSKVTV
Trigger: GACAGTCACTTTGGATTTGCACAGCACCAGCTCATA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGGTAGTCCAACCAGATaGGCTTACTACGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCGSPTR*AYYVHH
Trigger: ATGATGAACGTAGTAAGCGCATCTGGTTGGACTACC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTGTCCCCCAAGTAGATaGTGTCAAACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQCPPSR*CQTQTC
Trigger: ACACGTTTGAGTTTGACAGCATCTACTTGGGGGACA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACAATGTTCACCACCATaGCATCCAAGAGGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRQCSPP*HPRGRR
Trigger: TCTTCGACCTCTTGGATGCCATGGTGGTGAACATTG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCTCCATAGTAGAACATaGTCAGGTCTCCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCLHSRT*SGLQCS
Trigger: TGAACACTGGAGACCTGACCATGTTCTACTATGGAG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRHRSCC*HRQSRG
Trigger: TCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTCCACTTCTATCCCCTaGGTGAAGACTCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCSTSIP*VKTQFL
Trigger: GAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGA...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCAGGAATGTTCCCTGTaGAGATCTGCACCGAGTACA +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNQECSL*RSAPST
Trigger: TGTACTCGGTGCAGATCTTCACAGGGAACATTCCTG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR TCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATGCATGTCAGGGAAGTTaGATGTGTCCGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNACQGS*MCPCCS
Trigger: GGAACAACACGGACACATTCAACTTCCCTGACATGC...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAATCACACCATGTGAATaGACACACTGCTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRITPCE*THCSMH
Trigger: GTGCATGGAGCAGTGTGTGCATTCACATGGTGTGAT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGTAGATTTATCTTTCTaGTCCAGGGCCAGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRVDLSF*SRARLS
Trigger: CGACAACCTGGCCCTGGAGCAGAAAGATAAATCTAC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATAAGGTGTCTGTCAAGTaGCTCAGCATCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNKVSVK*LSICHS
Trigger: TGAGTGGCAGATGCTGAGGCACTTGACAGACACCTT...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTCTGTTCCCTCTTGTTaGTACACAGATACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQSVPSC*YTDTSA
Trigger: AGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGAACCAGTTCTCGAATaGTCTTTTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCEPVLE*SFCHPQ
Trigger: CTGAGGATGACAAAAAGACCATTCGAGAACTGGTTC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGAACCAGTTCTCGAATaGTCTTTTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQEPVLE*SFCHPQ
Trigger: CTGAGGATGACAAAAAGACCATTCGAGAACTGGTTC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATAGTAGGGAATAATTaGGCCCTCTTGAACGTAGTC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQIVGNN*ALLNVV
Trigger: GACTACGTTCAAGAGGGCCCAATTATTCCCTACTAT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACTTCCCAGTGGTGACTaGCACATAGTAGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLPSGD*HIVGNN
Trigger: ATTATTCCCTACTATGTGTCAGTCACCACTGGGAAG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR GCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATTCCTAAAGGCCCGCTaGCTAGAAGAATTTTCCATG +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRFLKAR*LEEFSM
Trigger: CATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCAGCCAACGTTGGCATaGAAAGTAGTACGTGATCTC +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNQPTLA*KVVRDL
Trigger: GAGATCACGTACTACTTTCCATGCCAACGTTGGCTG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CCA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCTCGTAAGGAACAAATaGTGTGTACAGCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNLVRNK*CVQPRL
Trigger: CAGACGAGGCTGTACACACCATTTGTTCCTTACGAG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCAGTGAAGATGTCATATaGAACCAGTTCTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCSEDVI*NQFSNG
Trigger: ACCATTCGAGAACTGGTTCCATATGACATCTTCACT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CCA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACTCCATAGTAGAACATaGTCAGGTCTCCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLHSRT*SGLQCS
Trigger: TGAACACTGGAGACCTGACCATGTTCTACTATGGAG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCAGTCTTTATGGTCACTaGGAATGTGGTAGATTTATC +
Preference number: 4 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCSLYGH*ECGRFI
Trigger: GATAAATCTACCACATTCTCAGTGACCATAAAGACT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGTCTTTATGGTCACTaGGAATGTGGTAGATTTATC +
Preference number: 4 (lower is better)
Translates to: LSEDVIWNQFSNGLFVILSLYGH*ECGRFI
Trigger: GATAAATCTACCACATTCTCAGTGACCATAAAGACT...GAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR TCA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGTCTTTATGGTCACTaGGAATGTGGTAGATTTATC +
Preference number: 4 (lower is better)
Translates to: LATGFIETGEKYTLLSKQSLYGH*ECGRFI
Trigger: GATAAATCTACCACATTCTCAGTGACCATAAAGACT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR TCA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAAGCAGATGCTAAGATaGGTTCTTTATAGGATATGG +
Preference number: 4 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASKQMLR*VLYRIW
Trigger: CCATATCCTATAAAGAACTCATCTTAGCATCTGCTT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR TCA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGAAGCAGATGCTAAGATaGGTTCTTTATAGGATATGG +
Preference number: 4 (lower is better)
Translates to: PLATGFIETGEKYTLLSKKQMLR*VLYRIW
Trigger: CCATATCCTATAAAGAACTCATCTTAGCATCTGCTT...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CCA 90 bp CCATCTTTCATGTATTTCTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGAACCAGTTCTCGAATaGTCTTTTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSFMYFSVKMSYGTSSRMEPVLE*SFCHPQ
Trigger: CTGAGGATGACAAAAAGACCATTCGAGAACTGGTTC...CATTCGAGAACTGGTTCCATATGACATCTTCACTGAGAAATACATGAAAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS GCA 90 bp CGGGCCTCCTCCTCCGGCGTGAGGTCCACCTCCCGCACCACCAGGTaGCGCAGCCACACGGTGTCCACGAACCAGCTGGGCCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: RASSSGVRSTSRTTR*RSHTVSTNQLGPKP
Trigger: GGGCTTTGGGCCCAGCTGGTTCGTGGACACCGTGTGGCTGCGGCACCTGGTGGTGCGGGAGGTGGACCTCACGCCGGAGGAGGAGGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp CCCGCACCACCAGGTGCCGCAGCCACACGGTGTCCACGAACCAGCTaGGCCCAAAGCCCTCGCCCGTGTGCCCGAGCCGGAGCTTATAGA +
Preference number: 5 (lower is better)
Translates to: PAPPGAAATRCPRTS*AQSPRPCARAGAYR
Trigger: TCTATAAGCTCCGGCTCGGGCACACGGGCGAGGGCTTTGGGCCCAGCTGGTTCGTGGACACCGTGTGGCTGCGGCACCTGGTGGTGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp TGGCGCCCACGGCCCTCCTATAGCTCAGGCCTGGGTGGGCCAGAGTaGCCCGTTTTCTTGGCTTCCCCGTGCCCAAGGTGCTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: WRPRPSYSSGLGGPE*PVFLASPCPRCCSL
Trigger: GAGGGAACAGCACCTTGGGCACGGGGAAGCCAAGAAAACGGGGCACTCTGGCCCACCCAGGCCTGAGCTATAGGAGGGCCGTGGGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS CCA 90 bp ACGGAGACCCGACTCAGGGGGCTAAGGAGGACAGCCAGCTCGATGTaGAAGATGTCCGTGCGGCCTCGGTCAAACACGCCGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TETRLRGLRRTASSM*KMSVRPRSNTPPSR
Trigger: CCTGGAGGGCGGCGTGTTTGACCGAGGCCGCACGGACATCTTCCACATCGAGCTGGCTGTCCTCCTTAGCCCCCTGAGTCGGGTCTCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTGCTCCAGGCGCACCTaGCGCAGCTCACCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVECSRRT*RSSPSS
Trigger: GGAGCTGGGTGAGCTGCGCAAGGTGCGCCTGGAGCA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TCCTCCTTGCCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTGTGCTaGTCAATCACCTCCTGCATCCCCGGCCCAAACTCCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SSLPRASQRWASNLC*SITSCIPGPNSSSS
Trigger: GGAAGAGGAGGAGTTTGGGCCGGGGATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp CCACCTCCAGGCGCCCGTCAGCCTGGTTCTTGTCCAGCCAGCGGTTaGCGGGAAAGGTGTACTGCTTGCCTTGACGGGGCACACGGATCT +
Preference number: 5 (lower is better)
Translates to: PPPGARQPGSCPASG*RERCTACLDGAHGS
Trigger: AGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACAAGAACCAGGCTGACGGGCGCCTGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp TTGTCCTCCTTGCCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTGTaGTGCTCAATCACCTCCTGCATCCCCGGCCCAAACTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSSLPRASQRWASNL*CSITSCIPGPNSSS
Trigger: AGAGGAGGAGTTTGGGCCGGGGATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp ACCACCTCGCTGGGATACAGCTCCACCTCCAGGCGCCCGTCAGCCTaGTTCTTGTCCAGCCAGCGGTTGGCGGGAAAGGTGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: TTSLGYSSTSRRPSA*FLSSQRLAGKVYCL
Trigger: CAAGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACAAGAACCAGGCTGACGGGCGCCTGGAGGTGGAGCTGTATCCCAGCGAGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp TCCACGACAAGTTCGTTGTCCTCCTTGCCCCGGGCCAGCCAGCGGTaGGCTTCGAACTTGTGCTGCTCAATCACCTCCTGCATCCCCGGC +
Preference number: 5 (lower is better)
Translates to: STTSSLSSLPRASQR*ASNLCCSITSCIPG
Trigger: GCCGGGGATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCACACCAGGGTCTTCTaGCCCTTCCGCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGHTRVF*PFRWDS
Trigger: GCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTGCTTCAGCTCCCGCTaGCCTGTGTCTCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGCFSSR*PVSPLA
Trigger: GGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCCACGACAAGTTCGTaGTCCTCCTTGCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSTTSS*SSLPRA
Trigger: GGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCGCTCAGGACCCGGCTaGCCAGCTGGCACCAACTCC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRSGPG*PAGTNS
Trigger: GGAGTTGGTGCCAGCTGGCAAGCCGGGTCCTGAGCG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGCTCCAGGCGCACCTaGCGCAGCTCACCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANACSRRT*RSSPSS
Trigger: GGAGCTGGGTGAGCTGCGCAAGGTGCGCCTGGAGCA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp CCTGGTTCTTGTCCAGCCAGCGGTTGGCGGGAAAGGTGTACTGCTTaGCTTGACGGGGCACACGGATCTGAACGCTGCCCAGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: PGSCPASGWRERCTA*LDGAHGSERCPGTS
Trigger: GCTGGTTCCTGGGCAGCGTTCAGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACAAGAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp GCTTGCCAGCTGGCACCAACTCCACGACAAGTTCGTTGTCCTCCTTaGCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTGTGCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: ACQLAPTPRQVRCPP*PGPASGGLRTCAAQ
Trigger: TTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGAGTTGGTGCCAGCTGGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp GTGCCTCAGCATCTGCCACTCAACGCCATTCTCTGTTTGTTCCTGTaGGTCAGCTGGCCCATGGGCTCTAGGTGCTGGGGCCCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: VPQHLPLNAILCLFL*VSWPMGSRCWGPAC
Trigger: GCAGGCAGGGCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000419859.1
ENST00000582408.6
CDS CCA 90 bp GTCGAGGGGGTTGTTGTCACCGCCTCCCCTACCCTCCTCGCTCTGTaGCAGCACATAGGACTCATCCACTGGCAACAGCTCCCTGGACAG +
Preference number: 5 (lower is better)
Translates to: VEGVVVTASPTLLAL*QHIGLIHWQQLPGQ
Trigger: CTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGTAGGGGAGGCGGTGACAACAACCCCCTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVENQPGA*PVLSWP
Trigger: TGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCGACATCGGCCATCTaGGAGCTCAGGGCGATCTCC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSTSAI*ELRAIS
Trigger: GGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCTGTTGACACCCACATaGCCATGCCCGACGGAGACC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLLTPT*PCPTET
Trigger: GGTCTCCGTCGGGCATGGCAATGTGGGTGTCAACAG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAGTTCGTTGTCCTCCTaGCCCCGGGCCAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSSLSS*PRASQR
Trigger: CCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTGCTCCAGGCGCACCTaGCGCAGCTCACCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSECSRRT*RSSPSS
Trigger: GGAGCTGGGTGAGCTGCGCAAGGTGCGCCTGGAGCA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS TCA 90 bp CCACATCCAAGCCTGCGACGTAGAACTCCTCCACAGAGCCACGGCTaGAGCCCCTCTTCCCTCGGGGGTAGTCCAACCAGATGCGCTTAC +
Preference number: 5 (lower is better)
Translates to: PHPSLRRRTPPQSHG*SPSSLGGSPTRCAY
Trigger: GTAAGCGCATCTGGTTGGACTACCCCCGAGGGAAGAGGGGCTTCAGCCGTGGCTCTGTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp GCGTCTCCAGGAAGAAGCGGTCTGTGCTGCCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCTCCCGCTTGCCTGTGTCTCCGTTGG +
Preference number: 5 (lower is better)
Translates to: ASPGRSGLCCPARRG*AFSASAPACLCLRW
Trigger: CCAACGGAGACACAGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp GCCTGGTCACTACCAGCTCCAGCGTCTCCAGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGTTGCGCATTTTCTGCTTCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: AWSLPAPASPGRSGL*CPARRGCAFSASAP
Trigger: GGGAGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGCTGGAGCTGGTAGTGACCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS GCA 90 bp ACCACCTTCTCACAGAACCAGCCTCTGTTGACACCCACATTGCCATaGCCGACGGAGACCCGACTCAGGGGGCTAAGGAGGACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: TTFSQNQPLLTPTLP*PTETRLRGLRRTAS
Trigger: GCTGGCTGTCCTCCTTAGCCCCCTGAGTCGGGTCTCCGTCGGGCATGGCAATGTGGGTGTCAACAGAGGCTGGTTCTGTGAGAAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp CACCTGAACCTCATAGGTGTTTCGCTCAGGACCCGGCTTGCCAGCTaGCACCAACTCCACGACAAGTTCGTTGTCCTCCTTGCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: HLNLIGVSLRTRLAS*HQLHDKFVVLLAPG
Trigger: GCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGAGTTGGTGCCAGCTGGCAAGCCGGGTCCTGAGCGAAACACCTATGAGGTTCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAACCAGCCTGCTCTGTaGCCTGTGTTGTCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGNQPAL*PVLSWR
Trigger: TCGCCACGACAACACAGGCAACAGAGCAGGCTGGTT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTGTCGAGGGGGTTGTaGTCACCGCCTCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALSRGL*SPPPLP
Trigger: GGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATTGTCGAGGGGGTTGTaGTCACCGCCTCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLSRGL*SPPPLP
Trigger: GGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGGGCCTTGCCTGTGTaGTCATGGCCAAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGALPV*SWPSRT
Trigger: AGTCCGGCTTGGCCATGACAACACAGGCAAGGCCCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGTCCGGTTCTCTGACTaGCCAAGGTATCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGVRFSD*PRYRSP
Trigger: TGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGAC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCGTCGCCTCTGTCCTaGGCCAGCCAGCAGTTACAG +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPSPLS*ASQQLQ
Trigger: CTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCACACCAGGGTCTTCTaGCCCTTCCGCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAHTRVF*PFRWDS
Trigger: GCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVETRLWT*LAKLSV
Trigger: GACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCACGATGACTTCGTACTaGACGGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGTMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGACGATGACTTCGTACTaGACGGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVETMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTGCCTGTGTCTCCGTaGGCCCCAAAGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVELPVSP*APKMVT
Trigger: CGTGACCATCTTTGGGGCCAACGGAGACACAGGCAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEPRSKR*RIFCFS
Trigger: GCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCGCTGCCGGAGCCTTaGCCATCGTGTCTGATCCTC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPLPEP*PSCLIL
Trigger: GAGGATCAGACACGATGGCAAAGGCTCCGGCAGCGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACATGGGAACTCCACGTaGTCGCTCTCAGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRHGNST*SLSGCP
Trigger: GGGGCAGCCTGAGAGCGACAACGTGGAGTTCCCATG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCCGTCAGCCTGGTTCTaGTCCAGCCAGCGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVPSAWF*SSQRLA
Trigger: CGCCAACCGCTGGCTGGACAAGAACCAGGCTGACGG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCGCTCAGGACCCGGCTaGCCAGCTGGCACCAACTCC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRSGPG*PAGTNS
Trigger: GGAGTTGGTGCCAGCTGGCAAGCCGGGTCCTGAGCG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGCATCAGTGCCGGCCTaGGGCACATTCCCCGTGACC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEASVPA*GTFPVT
Trigger: GGTCACGGGGAATGTGCCCAAGGCCGGCACTGATGC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTGGTGAGCTGGAGCTaGGGAGAGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVELVSWS*GESPFS
Trigger: AGAGAATGGGCTCTCTCCCAAGCTCCAGCTCACCAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCGGTCACCTTCCACCTaGCTCAGCCAGTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGRSPST*LSQLLQ
Trigger: CTGCAACAACTGGCTGAGCAAGGTGGAAGGTGACCG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS TCA 90 bp TTGGGCCCTCTTGAACGTAGTCAGCCATGGGCCCGGTCACTGTGCTaGTGTCGACATCGGCCATCTTGGAGCTCAGGGCGATCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LGPLERSQPWARSLC*CRHRPSWSSGRSPR
Trigger: TCTGGGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCGACATCAGCACAGTGACCGGGCCCATGGCTGACTACGTTCAAGAGGGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp CGGCCATCTTGGAGCTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTaGTGCAGTTGCTGCTGCGGTCCCCAGTGTACTCCTTCTCGTAAA +
Preference number: 5 (lower is better)
Translates to: RPSWSSGRSPRSQQG*CSCCCGPQCTPSRK
Trigger: TTTACGAGAAGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGCTCCAAGATGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TGGTCACTACCAGCTCCAGCGTCTCCAGGAAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGCGCATTTTCTGCTTCAGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: WSLPAPASPGRSGLC*PARRGCAFSASAPA
Trigger: AGCGGGAGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGCTGGAGCTGGTAGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS CCA 90 bp TCCCCTACCCTCCTCGCTCTGTGGCAGCACATAGGACTCATCCACTaGCAACAGCTCCCTGGACAGCTGGCCATCATCTTCCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: SPTLLALWQHIGLIH*QQLPGQLAIIFLHC
Trigger: GCAGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCTGTTGCCAGTGGATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 90 bp GGCATGTCCATGGGGTTGAAGCTGGCCAGCAGGTCACGGCACCACTaGCGGTCACCTTCCACCTTGCTCAGCCAGTTGTTGCAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GMSMGLKLASRSRHH*RSPSTLLSQLLQLK
Trigger: CTTCAACTGCAACAACTGGCTGAGCAAGGTGGAAGGTGACCGCCAGTGGTGCCGTGACCTGCTGGCCAGCTTCAACCCCATGGACATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATGGCGAATCCGAATCTaGGTCAGGGCCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRWRIRI*VRAPRS
Trigger: TGACCTGGGGGCCCTGACCAAGATTCGGATTCGCCA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGGCGAATCCGAATCTaGGTCAGGGCCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAWRIRI*VRAPRS
Trigger: TGACCTGGGGGCCCTGACCAAGATTCGGATTCGCCA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGCTCTGTTGCCTGTGTaGTCGTGGCGAATCCGAATC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGALLPV*SWRIRI
Trigger: GATTCGGATTCGCCACGACAACACAGGCAACAGAGC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTTGTCGAGGGGGTTGTaGTCACCGCCTCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELSRGL*SPPPLP
Trigger: GGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAAGGTTGTCGAGGGGGTaGTTGTCACCGCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRRLSRG*LSPPPL
Trigger: TAGGGGAGGCGGTGACAACAACCCCCTCGACAACCT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGGTTGTCGAGGGGGTaGTTGTCACCGCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARLSRG*LSPPPL
Trigger: TAGGGGAGGCGGTGACAACAACCCCCTCGACAACCT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp TCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGCTCCAGGGCCAGGTaGTCGAGGGGGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SSEVASHRSHGKVKVSAPCSRAR*SRGLLS
Trigger: TGACAACAACCCCCTCGACAACCTGGCCCTGGAGCA...GGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTGCTCCAGGGCCAGGTaGTCGAGGGGGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANACSRAR*SRGLLS
Trigger: TGACAACAACCCCCTCGACAACCTGGCCCTGGAGCA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTGCTCCAGGGCCAGGTaGTCGAGGGGGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGCSRAR*SRGLLS
Trigger: TGACAACAACCCCCTCGACAACCTGGCCCTGGAGCA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGGGGCCTTGCCTGTGTaGTCATGGCCAAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERGALPV*SWPSRT
Trigger: AGTCCGGCTTGGCCATGACAACACAGGCAAGGCCCC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: LRGGKPPIAWESQGLCTLNQPGA*PVLSWP
Trigger: TGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...CAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGNQPGA*PVLSWP
Trigger: TGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCGACATCGGCCATCTaGGAGCTCAGGGCGATCTCC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASTSAI*ELRAIS
Trigger: GGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCAGTGGCCGCGTCCTaGTGCTTCCCAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSVAAS*CFPVVT
Trigger: AGTCACCACTGGGAAGCACAAGGACGCGGCCACTGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCACACCAGGGTCTTCTaGCCCTTCCGCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVHTRVF*PFRWDS
Trigger: GCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCGTCACCCTCACTCTaGGAGAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPSPSL*ESQQSH
Trigger: GTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACCGTCACCCTCACTCTaGGAGAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRPSPSL*ESQQSH
Trigger: GTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTGCTTCAGCTCCCGCTaGCCTGTGTCTCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVCFSSR*PVSPLA
Trigger: GGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACTGTTGACACCCACATaGCCATGCCCGACGGAGACC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLLTPT*PCPTET
Trigger: GGTCTCCGTCGGGCATGGCAATGTGGGTGTCAACAG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCATGGGAACTCCACGTaGTCGCTCTCAGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEHGNST*SLSGCP
Trigger: GGGGCAGCCTGAGAGCGACAACGTGGAGTTCCCATG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTGTCCAGCCAGCGGTaGGCGGGAAAGGTGTACTGC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALSSQR*AGKVYC
Trigger: GCAGTACACCTTTCCCGCCAACCGCTGGCTGGACAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGCAGCTGCCGCAGCTaGTCCTTCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVESSCRS*SFSFFF
Trigger: GAAGAAGAAGGAGAAGGACAAGCTGCGGCAGCTGCT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGCAGCTGCCGCAGCTaGTCCTTCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSSCRS*SFSFFF
Trigger: GAAGAAGAAGGAGAAGGACAAGCTGCGGCAGCTGCT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTCCACGACAAGTTCGTaGTCCTCCTTGCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESTTSS*SSLPRA
Trigger: GGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCGGAACACATCGACGTaGCCCTTCTCAAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVERNTST*PFSKAD
Trigger: GTCTGCCTTTGAGAAGGGCAACGTCGATGTGTTCCG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp AGCTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTGCTGCAGTTGCTaGTGCGGTCCCCAGTGTACTCCTTCTCGTAAAAGAGCCTCTCGA +
Preference number: 5 (lower is better)
Translates to: SSGRSPRSQQGCCSC*CGPQCTPSRKRASR
Trigger: TCGAGAGGCTCTTTTACGAGAAGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TGGAGCTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTGCTGCAGTTaGTGCTGCGGTCCCCAGTGTACTCCTTCTCGTAAAAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: WSSGRSPRSQQGCCS*CCGPQCTPSRKRAS
Trigger: AGAGGCTCTTTTACGAGAAGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp CTGATGAGGACGACTCCTCTTCCTCCCCCTCGTCCTCTTCGTCGCTaGCCTTCCTCTTCTTCTTCTTCCTCTGCAGCTTGGCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LMRTTPLPPPRPLRR*PSSSSSSSAAWPSA
Trigger: GGCTGAAGGCCAAGCTGCAGAGGAAGAAGAAGAAGAGGAAGGGCAGCGACGAAGAGGACGAGGGGGAGGAAGAGGAGTCGTCCTCATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp TCAGGGAGAGCCAGCGCCCGCATAGGAACAGGAACTCGTCCTCGTTaGTGTCATTCCAGATCTCCACCTTCTCCACGTACCAGTCTGCGC +
Preference number: 5 (lower is better)
Translates to: SGRASARIGTGTRPR*CHSRSPPSPRTSLR
Trigger: GCGCAGACTGGTACGTGGAGAAGGTGGAGATCTGGAATGACACCAACGAGGACGAGTTCCTGTTCCTATGCGGGCGCTGGCTCTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 90 bp AGCCTGAGGTGTGCTCCAAAGAGAATGTCTGCCCTCTGTCTCCACTaGAGGGTGAGGCGCAGCCTGCTCTTCCTGGTGTGCCTTCACCAA +
Preference number: 5 (lower is better)
Translates to: SLRCAPKRMSALCLH*RVRRSLLFLVCLHQ
Trigger: TTGGTGAAGGCACACCAGGAAGAGCAGGCTGCGCCTCACCCTCCAGTGGAGACAGAGGGCAGACATTCTCTTTGGAGCACACCTCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398686.8
ENST00000398705.7
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAAACCAGCCTGCTCTGTaGCCTGTGTTGTCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRNQPAL*PVLSWR
Trigger: TCGCCACGACAACACAGGCAACAGAGCAGGCTGGTT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCACTGCCAGCCAACGTaGGCATGGAAAGTAGTACGT +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEHCQPT*AWKVVR
Trigger: ACGTACTACTTTCCATGCCAACGTTGGCTGGCAGTG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGATGTCAGGTTGTCGAGGGGGTaGTTGTCACCGCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: RWQATDRMGKSRSLHPDVRLSRG*LSPPPL
Trigger: TAGGGGAGGCGGTGACAACAACCCCCTCGACAACCT...GACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGGTTGTCGAGGGGGTaGTTGTCACCGCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRLSRG*LSPPPL
Trigger: TAGGGGAGGCGGTGACAACAACCCCCTCGACAACCT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTGCTCCAGGGCCAGGTaGTCGAGGGGGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERCSRAR*SRGLLS
Trigger: TGACAACAACCCCCTCGACAACCTGGCCCTGGAGCA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGGGGCCTTGCCTGTGTaGTCATGGCCAAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFGALPV*SWPSRT
Trigger: AGTCCGGCTTGGCCATGACAACACAGGCAAGGCCCC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVNQPGA*PVLSWP
Trigger: TGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGTCCGGTTCTCTGACTaGCCAAGGTATCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRVRFSD*PRYRSP
Trigger: TGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGAC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCCTCTCTCGAACTTGTaGGTCCGGTTCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGPLSNL*VRFSDL
Trigger: CAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCTCTCTCGAACTTGTaGGTCCGGTTCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEPLSNL*VRFSDL
Trigger: CAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGCGCACCACTTGGAGTaGTCATGGCGGAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGAHHLE*SWRSLI
Trigger: GATCAAGCTCCGCCATGACAACTCCAAGTGGTGCGC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCAGTCTGCGCACCACTaGGAGTTGTCATGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEQSAHH*ELSWRS
Trigger: GCTCCGCCATGACAACTCCAAGTGGTGCGCAGACTG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGGAACTCGTCCTCGTaGGTGTCATTCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVERNSSS*VSFQIS
Trigger: GGAGATCTGGAATGACACCAACGAGGACGAGTTCCT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTCGACATCGGCCATCTaGGAGCTCAGGGCGATCTCC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESTSAI*ELRAIS
Trigger: GGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCGA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTCAGTGGCCGCGTCCTaGTGCTTCCCAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSVAAS*CFPVVT
Trigger: AGTCACCACTGGGAAGCACAAGGACGCGGCCACTGA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGGGTCATGAAGATGTaGGAGTCAGTGCCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARVMKM*ESVPPP
Trigger: TGGCGGGGGCACTGACTCCAACATCTTCATGACCCT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAGGGTCATGAAGATGTaGGAGTCAGTGCCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRVMKM*ESVPPP
Trigger: TGGCGGGGGCACTGACTCCAACATCTTCATGACCCT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCACACCAGGGTCTTCTaGCCCTTCCGCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFHTRVF*PFRWDS
Trigger: GCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEGNIPL*SCQTLS
Trigger: GCTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGQASSL*GINRSS
Trigger: GGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTACTTCCTCTTCCTCTaGAGGGGGATGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGYFLFL*RGMRQS
Trigger: TGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANATRLWT*LAKLSV
Trigger: GACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTGCCTGTGTCTCCGTaGGCCCCAAAGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALPVSP*APKMVT
Trigger: CGTGACCATCTTTGGGGCCAACGGAGACACAGGCAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTGCTTCAGCTCCCGCTaGCCTGTGTCTCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFCFSSR*PVSPLA
Trigger: GGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPRSKR*RIFCFS
Trigger: GCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTCTCATCCAGCCAGTaGCTACAAGGGAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEFSSSQ*LQGKVC
Trigger: GCAGACCTTCCCTTGTAGCAACTGGCTGGATGAGAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTCATTGTCATCCTCATaGGCATCCAGCCAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGSLSSS*ASSQRL
Trigger: CAACCGCTGGCTGGATGCCAATGAGGATGACAATGA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTCATTGTCATCCTCATaGGCATCCAGCCAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVESLSSS*ASSQRL
Trigger: CAACCGCTGGCTGGATGCCAATGAGGATGACAATGA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCCGCTGCCGGAGCCTTaGCCATCGTGTCTGATCCTC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFPLPEP*PSCLIL
Trigger: GAGGATCAGACACGATGGCAAAGGCTCCGGCAGCGG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGGTGTACTGCTTGCCTaGACGGGGCACACGGATCTG +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEGVLLA*TGHTDL
Trigger: CAGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTGTCCAGCCAGCGGTaGGCGGGAAAGGTGTACTGC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLSSQR*AGKVYC
Trigger: GCAGTACACCTTTCCCGCCAACCGCTGGCTGGACAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTCTTCCTCTGCAGCTaGGCCTTCAGCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGFFLCS*AFSRSF
Trigger: GAAGGAGCGGCTGAAGGCCAAGCTGCAGAGGAAGAA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCGGCAGAAATGTGAGATaGGGGCATCTCAGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGGRNVR*GHLSER
Trigger: CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCC...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS TCA 90 bp GTCTCTGCACCGTCTTTATCCGGGAGGAGCCTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGATTCATGCCCGTGTTATTATGGCCA +
Preference number: 5 (lower is better)
Translates to: VSAPSLSGRSLRMST*EQCHPGFMPVLLWP
Trigger: TGGCCATAATAACACGGGCATGAATCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATAAAGACGGTGCAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp CCATCTTGGAGCTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTGCTaGAGTTGCTGCTGCGGTCCCCAGTGTACTCCTTCTCGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: PSWSSGRSPRSQQGC*SCCCGPQCTPSRKR
Trigger: TCTTTTACGAGAAGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGCTCCAAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp CCAGCAGTTACAGTTCAACATGTACTTGGTGCCCTGGGTGGGCACTaGCAAACACAACTCTTCCACCAGCCAGCAGCTCTCAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PAVTVQHVLGALGGH*QTQLFHQPAALRGG
Trigger: GCCTCCCCTGAGAGCTGCTGGCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS GCA 90 bp AGAGGGCCATATGGATCACACCATGTGAATGCACACACTGCTCCATaGACGGGAGGAAGCAGACCACACCAGGAACCTGCCAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RGPYGSHHVNAHTAP*TGGSRPHQEPAKAQ
Trigger: CTGGGCCTTGGCAGGTTCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATATGGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS CCA 90 bp CGCCTCTGTCCTTGGCCAGCCAGCAGTTACAGTTCAACATGTACTTaGTGCCCTGGGTGGGCACTGCCAAACACAACTCTTCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: RLCPWPASSYSSTCT*CPGWALPNTTLPPA
Trigger: GGCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCTGGCCAAGGACAGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAACCAGCCTGCTCTGTaGCCTGTGTTGTCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSENQPAL*PVLSWR
Trigger: TCGCCACGACAACACAGGCAACAGAGCAGGCTGGTT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGATGTCAGGATTTTGTCGAGGGGGTTGTaGTCACCGCCTCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: QATDRMGKSRSLHPDVRILSRGL*SPPPLP
Trigger: GGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAA...AATCCTGACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp TCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGGGGGCCTTGCCTGTGTaGTCATGGCCAAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: SRMVFLSSSEVASHRSHGGALPV*SWPSRT
Trigger: AGTCCGGCTTGGCCATGACAACACAGGCAAGGCCCC...CCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGTCCGGTTCTCTGACTaGCCAAGGTATCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVVRFSD*PRYRSP
Trigger: TGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGAC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGCGCACCACTTGGAGTaGTCATGGCGGAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEAHHLE*SWRSLI
Trigger: GATCAAGCTCCGCCATGACAACTCCAAGTGGTGCGC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCAGTCTGCGCACCACTaGGAGTTGTCATGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFQSAHH*ELSWRS
Trigger: GCTCCGCCATGACAACTCCAAGTGGTGCGCAGACTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCAGTGGCCGCGTCCTaGTGCTTCCCAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSVAAS*CFPVVT
Trigger: AGTCACCACTGGGAAGCACAAGGACGCGGCCACTGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCAGTTCAACATGTACTaGGTGCCCTGGGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAQFNMY*VPWVGT
Trigger: AGTGCCCACCCAGGGCACCAAGTACATGTTGAACTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTCATGAAGATGTaGGAGTCAGTGCCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSERVMKM*ESVPPP
Trigger: TGGCGGGGGCACTGACTCCAACATCTTCATGACCCT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEIRIRI*VNGAMS
Trigger: AGACATTGCTCCATTCACCAAGATGCGGATCCGGAT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTGTTCCGCTCAAACTaGTTCCAGTTTGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVELFRSN*FQFADC
Trigger: GCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTTGTTCCGCTCAAACTaGTTCCAGTTTGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLFRSN*FQFADC
Trigger: GCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCCGTCACCCTCACTCTaGGAGAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFPSPSL*ESQQSH
Trigger: GTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACTGGTTTCGCCTCCGTaGCCCGTTTCTATGACGATC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLVSPP*PVSMTI
Trigger: GATCGTCATAGAAACGGGCAACGGAGGCGAAACCAG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSETRLWT*LAKLSV
Trigger: GACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGACGATGACTTCGTACTaGACGGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVTMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTGCCTGTGTCTCCGTaGGCCCCAAAGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLPVSP*APKMVT
Trigger: CGTGACCATCTTTGGGGCCAACGGAGACACAGGCAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERPRSKR*RIFCFS
Trigger: GCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVPRSKR*RIFCFS
Trigger: GCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCTTTCTTTAGGTCGGTaGTCCAGACCCACAGGGACC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGLSLGR*SRPTGT
Trigger: GGTCCCTGTGGGTCTGGACAACCGACCTAAAGAAAG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCCGGGTTTGAACCACTaGTTGTTGGGATTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEPGLNH*LLGFRR
Trigger: TCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGGTGTACTGCTTGCCTaGACGGGGCACACGGATCTG +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFGVLLA*TGHTDL
Trigger: CAGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCCCGTTCAAAAACTTTaGAGCGGCTGGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGPVQKL*SGWRGR
Trigger: TCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGGG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAGCTGGAATGTGTCCTaGGACGCCCGTTCAAAAACT +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVESWNVS*DARSKT
Trigger: AGTTTTTGAACGGGCGTCCAAGGACACATTCCAGCT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCGGTGGGCTTCGAACTaGTGCTGCTCAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRWASN*CCSITS
Trigger: GGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCTGGTGAGCTGGAGCTaGGGAGAGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLVSWS*GESPFS
Trigger: AGAGAATGGGCTCTCTCCCAAGCTCCAGCTCACCAG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAAGGCAGACTTGCTCTaGCTGGTGAGCTGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAKADLL*LVSWSL
Trigger: CAAGCTCCAGCTCACCAGCAAGAGCAAGTCTGCCTT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCGGTCACCTTCCACCTaGCTCAGCCAGTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERRSPST*LSQLLQ
Trigger: CTGCAACAACTGGCTGAGCAAGGTGGAAGGTGACCG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS TCA 90 bp GAAGGTGTCAGCCGTTCCTCTCTCGAACTTGTTGGTCCGGTTCTCTaGCTTGCCAAGGTATCGCTCCCCAGTGTCCCCGAGGTCTCCATA +
Preference number: 5 (lower is better)
Translates to: EGVSRSSLELVGPVL*LAKVSLPSVPEVSI
Trigger: TATGGAGACCTCGGGGACACTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAACGGCTGACACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 90 bp CAATGTTCACCACCATGGCATCCAAGAGGTCGAAGACACGGGAGGTaGTGCCGTCGCCTCTGTCCTTGGCCAGCCAGCAGTTACAGTTCA +
Preference number: 5 (lower is better)
Translates to: QCSPPWHPRGRRHGR*CRRLCPWPASSYSS
Trigger: TGAACTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACGGCATCACCTCCCGTGTCTTCGACCTCTTGGATGCCATGGTGGTGAACATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS GCA 90 bp CGTCGTCTTCGTTTTTGGCCAGCCAGCGGCCACAGGGAAACGTCATaGACTTCCCAAGAGATGGGGCATCCACCTCTACCCAGTCTACAA +
Preference number: 5 (lower is better)
Translates to: RRLRFWPASGHRETS*TSQEMGHPPLPSLQ
Trigger: TTGTAGACTGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TGTCAGCCGTTCCTCTCTCGAACTTGTTGGTCCGGTTCTCTGACTTaGCAAGGTATCGCTCCCCAGTGTCCCCGAGGTCTCCATAGATGG +
Preference number: 5 (lower is better)
Translates to: CQPFLSRTCWSGSLT*QGIAPQCPRGLHRW
Trigger: CCATCTATGGAGACCTCGGGGACACTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAACGGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp CTCTGTCCTTGGCCAGCCAGCAGTTACAGTTCAACATGTACTTGGTaGCCTGGGTGGGCACTGCCAAACACAACTCTTCCACCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LCPWPASSYSSTCTW*PGWALPNTTLPPAS
Trigger: GCTGGCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCTGGCCAAGGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS GCA 90 bp TCATCACAGATCTTGTTGTTGGCACAGGCAAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTGGAGAGCCAGCAGTCACACTGGAAG +
Preference number: 5 (lower is better)
Translates to: SSQILLLAQAKSRTV*PSPSLLESQQSHWK
Trigger: CTTCCAGTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp GACTTCCTCTTGAACCCCCGCATCCCTACCAAGTGCCTCAGCATCTaGCACTCAACGCCATTCTCTGTTTGTTCCTGTGGGTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: DFLLNPRIPTKCLSI*HSTPFSVCSCGSAG
Trigger: GCCAGCTGACCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGGTAGGGATGCGGGGGTTCAAGAGGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS CCA 90 bp CTCTGTTTGTTCCTGTGGGTCAGCTGGCCCATGGGCTCTAGGTGCTaGGGCCCTGCCTGCAATTCTCTCATAACCCCTCCACAAAGTATC +
Preference number: 5 (lower is better)
Translates to: LCLFLWVSWPMGSRC*GPACNSLITPPQSI
Trigger: GATACTTTGTGGAGGGGTTATGAGAGAATTGCAGGCAGGGCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000582408.6
CDS CCA 90 bp TGGCCAGCCAGCAGTTACAGTTCAACATGTACTTGGTGCCCTGGGTaGGCACTGCCAAACACAACTCTTCCACCAGCCAGCAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: WPASSYSSTCTWCPG*ALPNTTLPPASSSQ
Trigger: CTGAGAGCTGCTGGCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS CCA 90 bp TCCTTGGCCAGCCAGCAGTTACAGTTCAACATGTACTTGGTGCCCTaGGTGGGCACTGCCAAACACAACTCTTCCACCAGCCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SLASQQLQFNMYLVP*VGTAKHNSSTSQQL
Trigger: GAGCTGCTGGCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCTGGCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS CCA 90 bp CGATCTCGTAGGTGGTCTCTTCCAGCTCATCACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGACCGTCTGCCCGTCACCCTCACTCT +
Preference number: 5 (lower is better)
Translates to: RSRRWSLPAHHRSCC*HRQSRGPSARHPHS
Trigger: AGAGTGAGGGTGACGGGCAGACGGTCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCTGGAAGAGACCACCTACGAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 90 bp TCTCAACCTCATAGTGGACCAATTTCTGGATCTCCACCACCTCGCTaGGATACAGCTCCACCTCCAGGCGCCCGTCAGCCTGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SQPHSGPISGSPPPR*DTAPPPGARQPGSC
Trigger: ACAAGAACCAGGCTGACGGGCGCCTGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGATCCAGAAATTGGTCCACTATGAGGTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGCTCTGTTGCCTGTGTaGTCGTGGCGAATCCGAATC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERALLPV*SWRIRI
Trigger: GATTCGGATTCGCCACGACAACACAGGCAACAGAGC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACACTGCCAGCCAACGTaGGCATGGAAAGTAGTACGT +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRHCQPT*AWKVVR
Trigger: ACGTACTACTTTCCATGCCAACGTTGGCTGGCAGTG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCTTGTCGAGGGGGTTGTaGTCACCGCCTCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: YPLGEDSISHPHSAASPSLSRGL*SPPPLP
Trigger: GGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAA...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCATGATGATGAAGATGTaGGCATCTGTCCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGMMMKM*ASVPAA
Trigger: TGCTGCTGGGACAGATGCCAACATCTTCATCATCAT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCTCTCTCGAACTTGTaGGTCCGGTTCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPLSNL*VRFSDL
Trigger: CAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGTTCCTCTCTCGAACTaGTTGGTCCGGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRVPLSN*LVRFSD
Trigger: GTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAAC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTTCCTCTCTCGAACTaGTTGGTCCGGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVPLSN*LVRFSD
Trigger: GTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAGGAACTCGTCCTCGTaGGTGTCATTCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGRNSSS*VSFQIS
Trigger: GGAGATCTGGAATGACACCAACGAGGACGAGTTCCT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAACCTGGCTTTCTTTTaGTCCAGCTGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGNLAFF*SSCISS
Trigger: AGAGGAGATGCAGCTGGACAAAAAGAAAGCCAGGTT...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCAAACTTGTTCCAGTTaGCCGACTGCTTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAQTCSS*PTASGP
Trigger: TGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCAAACTTGTTCCAGTTaGCCGACTGCTTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGQTCSS*PTASGP
Trigger: TGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGNIPL*SCQTLS
Trigger: GCTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCCGTCACCCTCACTCTaGGAGAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: LGEDSISHPHSAASPSLVPSPSL*ESQQSH
Trigger: GTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGG...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCACAGATCTTGTTGTaGGCACAGGCAAAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASQILL*AQAKSR
Trigger: CCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCACAGATCTTGTTGTaGGCACAGGCAAAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSQILL*AQAKSR
Trigger: CCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCTGGTTTCGCCTCCGTaGCCCGTTTCTATGACGATC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELVSPP*PVSMTI
Trigger: GATCGTCATAGAAACGGGCAACGGAGGCGAAACCAG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGQASSL*GINRSS
Trigger: GGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTACGATGACTTCGTACTaGACGGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFTMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCTTTCTTTAGGTCGGTaGTCCAGACCCACAGGGACC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERLSLGR*SRPTGT
Trigger: GGTCCCTGTGGGTCTGGACAACCGACCTAAAGAAAG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTCCCTCACTATCTCATaGTCATCCTCATTGGCATCC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVESLTIS*SSSLAS
Trigger: GGATGCCAATGAGGATGACAATGAGATAGTGAGGGA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTTCTTCCTCTGCAGCTaGGCCTTCAGCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFFFLCS*AFSRSF
Trigger: GAAGGAGCGGCTGAAGGCCAAGCTGCAGAGGAAGAA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTGCCCCTGCTCAAATTaGTTGGACTTGTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGCPCSN*LDLSDF
Trigger: GAAGTCAGACAAGTCCAACAAATTTGAGCAGGGGCA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGCTTGAGATTGGGGTTTaGCCATTTAGCCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVELEIGV*PFSLRC
Trigger: ACACCTCAGGCTAAATGGCAAAACCCCAATCTCAAG...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGGCAGAAATGTGAGATaGGGGCATCTCAGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRGRNVR*GHLSER
Trigger: CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCGGAACACATCGACGTaGCCCTTCTCAAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERRNTST*PFSKAD
Trigger: GTCTGCCTTTGAGAAGGGCAACGTCGATGTGTTCCG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAATGAGGCCCACATTGTaGGTTCTCACCCGGAACACA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRMRPTL*VLTRNT
Trigger: TGTGTTCCGGGTGAGAACCAACAATGTGGGCCTCAT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGATGTCGGGGATGTTCACAGTTaGTCCCCAGCCTCATGGTTC +
Preference number: 5 (lower is better)
Translates to: RWQATDRMGKSRSLHPDVGDVHS*SPASWF
Trigger: GAACCATGAGGCTGGGGACAAACTGTGAACATCCCC...GACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS GCA 90 bp ATTCTCTGTTTGTTCCTGTGGGTCAGCTGGCCCATGGGCTCTAGGTaGTGGGGCCCTGCCTGCAATTCTCTCATAACCCCTCCACAAAGT +
Preference number: 5 (lower is better)
Translates to: ILCLFLWVSWPMGSR*WGPACNSLITPPQS
Trigger: ACTTTGTGGAGGGGTTATGAGAGAATTGCAGGCAGGGCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000419859.1
ENST00000582408.6
CDS GCA 90 bp AGAGGGCCATATGGATCACACCATGTGAATGCACACACTGCTCCATaGACGGGAGGAAGCAGACCACACCAGGAACCAAGTGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RGPYGSHHVNAHTAP*TGGSRPHQEPSASA
Trigger: TGCTGAGGCACTTGGTTCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATATGGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS GCA 90 bp GGTGTGAAGAGGGCCATATGGATCACACCATGTGAATGCACACACTaGTCCATGCACGGGAGGAAGCAGACCACACCAGGAACCAAGTGC +
Preference number: 5 (lower is better)
Translates to: GVKRAIWITPCECTH*SMHGRKQTTPGTKC
Trigger: GCACTTGGTTCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATATGGCCCTCTTCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS GCA 90 bp GTCATGGCCCAGCTCTATTTTCTTGATGATGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCACAGAGCCACGGCTGAAGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: VMAQLYFLDDAHIQA*DVELLHRATAEAPL
Trigger: AAGAGGGGCTTCAGCCGTGGCTCTGTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGCATCATCAAGAAAATAGAGCTGGGCCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS GCA 90 bp TTCAGTGTCGCGCTGCTGTCACTGGGTAGCAACTCTCGGACCAGCTaGCCATCATCCTTATCCTTGTCCAACCACCTGAGACATGGGAAC +
Preference number: 5 (lower is better)
Translates to: FSVALLSLGSNSRTS*PSSLSLSNHLRHGN
Trigger: GTTCCCATGTCTCAGGTGGTTGGACAAGGATAAGGATGATGGGCAGCTGGTCCGAGAGTTGCTACCCAGTGACAGCAGCGCGACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp TCTTGCGGCGAGGACTTCCTCTTGAACCCCCGCATCCCTACCAAGTaGCTCAGCATCTGCCACTCAACGCCATTCTCTGTTTGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SCGEDFLLNPRIPTK*LSICHSTPFSVCSC
Trigger: ACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGGTAGGGATGCGGGGGTTCAAGAGGAAGTCCTCGCCGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS GCA 90 bp GGTGTGAAGAGGGCCATATGGATCACACCATGTGAATGCACACACTaGTCCATGCACGGGAGGAAGCAGACCACACCAGGAACCTGCCAA +
Preference number: 5 (lower is better)
Translates to: GVKRAIWITPCECTH*SMHGRKQTTPGTCQ
Trigger: TTGGCAGGTTCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATATGGCCCTCTTCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAACGCCATTCTCTGTTaGTTCCTGTGGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERNAILC*FLWVSW
Trigger: CCAGCTGACCCACAGGAACAAACAGAGAATGGCGTT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALSLFV*EDFRRV
Trigger: GACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCCAAACTTATCGCTGTTaGTCTTGGAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGQTYRC*SWRTSG
Trigger: TCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTG...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTGCTTCTGTTCCCTCTaGTTGGTACACAGATACTTC +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGCFCSL*LVHRYF
Trigger: GAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAGGAACTCGTCCTCGTaGGTGTCATTCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERRNSSS*VSFQIS
Trigger: GGAGATCTGGAATGACACCAACGAGGACGAGTTCCT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGTTGAATGTGTCCGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVELNVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACGGACACATTCAA...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEGNIPL*SCQTLS
Trigger: GCTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTCACAGATCTTGTTGTaGGCACAGGCAAAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESQILL*AQAKSR
Trigger: CCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCTGGTTTCGCCTCCGTaGCCCGTTTCTATGACGATC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLVSPP*PVSMTI
Trigger: GATCGTCATAGAAACGGGCAACGGAGGCGAAACCAG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGCAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERQASSL*GINRSS
Trigger: GGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTG...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGTGATGGTGATGGTCTaGACATGCCAGGCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAVMVMV*TCQASS
Trigger: AGAACTTGCCTGGCATGTCAAGACCATCACCATCAC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTGATGGTGATGGTCTaGACATGCCAGGCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVMVMV*TCQASS
Trigger: AGAACTTGCCTGGCATGTCAAGACCATCACCATCAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCTTAAAGAAGTACACATaGCCGTACTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: PSANARGFEGLLTAKVEGLKKYT*PYSISV
Trigger: CACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA...GCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTACTTCCTCTTCCTCTaGAGGGGGATGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVYFLFL*RGMRQS
Trigger: TGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGTAACCTCGAATACCTaGAAGTACTTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEVTSNT*KYFLFL
Trigger: GAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTAC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LGEDSISHPHSAASPSLVPRSKR*RIFCFS
Trigger: GCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGG...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTCTCATCCAGCCAGTaGCTACAAGGGAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVFSSSQ*LQGKVC
Trigger: GCAGACCTTCCCTTGTAGCAACTGGCTGGATGAGAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGTTTGAACCACTTGTaGTTGGGATTCAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEGLNHL*LGFRRI
Trigger: GATTCTCCTGAATCCCAACAACAAGTGGTTCAAACC...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACCGGGTTTGAACCACTaGTTGTTGGGATTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRPGLNH*LLGFRR
Trigger: TCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCCGTTCAAAAACTTTaGAGCGGCTGGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPVQKL*SGWRGR
Trigger: TCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAAGGCAGACTTGCTCTaGCTGGTGAGCTGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFKADLL*LVSWSL
Trigger: CAAGCTCCAGCTCACCAGCAAGAGCAAGTCTGCCTT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTCTCAAAGGCAGACTaGCTCTTGCTGGTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVFSKAD*LLLVSW
Trigger: CCAGCTCACCAGCAAGAGCAAGTCTGCCTTTGAGAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTTCTCAAAGGCAGACTaGCTCTTGCTGGTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERFSKAD*LLLVSW
Trigger: CCAGCTCACCAGCAAGAGCAAGTCTGCCTTTGAGAA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGATGAGGCCCACATTGTaGGTTCTCACCCGGAACACA +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERMRPTL*VLTRNT
Trigger: TGTGTTCCGGGTGAGAACCAACAATGTGGGCCTCAT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGCATTCAAGCCCGTGTaGTCATGCTCAATCCTGACT +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGAFKPV*SCSILT
Trigger: AGTCAGGATTGAGCATGACAACACGGGCTTGAATGC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGCATTCAAGCCCGTGTaGTCATGCTCAATCCTGACT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAAFKPV*SCSILT
Trigger: AGTCAGGATTGAGCATGACAACACGGGCTTGAATGC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTGTTGTGGCCAACATaGATCTTCATCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALLWPT*IFISCP
Trigger: GGGGCAGCTGATGAAGATCAATGTTGGCCACAACAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATTGTTGTGGCCAACATaGATCTTCATCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLLWPT*IFISCP
Trigger: GGGGCAGCTGATGAAGATCAATGTTGGCCACAACAA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGATATCCCTTTGGATTTaGCCATCGTCTTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEISLWI*PSSSSK
Trigger: CTTGGACGAAGACGATGGCAAAATCCAAAGGGATAT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp CACGTTGGCATCAGTGCCTGCTCCCAGGATGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCACTCCATCATTTCTTCCTCATCGAT +
Preference number: 5 (lower is better)
Translates to: HVGISACSQDVAGLN*DGVGGPLHHFFLID
Trigger: ATCGATGAGGAAGAAATGATGGAGTGGACCTCCTACACCGTCGCAGTTAAGACCAGCGACATCCTGGGAGCAGGCACTGATGCCAACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp AATGTGTCCGTGTTGTTCCGCTCAAACTTGTTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCACTATCCCCGTTCTCCCCGAAGATG +
Preference number: 5 (lower is better)
Translates to: NVSVLFRSNLFQFAD*FRASVPLSPFSPKM
Trigger: CATCTTCGGGGAGAACGGGGATAGTGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAACACGGACACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp GAAGTTGAATGTGTCCGTGTTGTTCCGCTCAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAGTGTCCCACTATCCCCGTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: EVECVRVVPLKLVPV*RLLQGQCPTIPVLP
Trigger: GGGGAGAACGGGGATAGTGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAACACGGACACATTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp GCCTTTCTCTCCATAGATCTGCATGTAGACTCGGGCACTGGTGCCTaGGCCACCCACATCTCCTGTCCAAATCTCAACCTCATAGTGGAC +
Preference number: 5 (lower is better)
Translates to: AFLSIDLHVDSGTGA*ATHISCPNLNLIVD
Trigger: GTCCACTATGAGGTTGAGATTTGGACAGGAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCTACATGCAGATCTATGGAGAGAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCACTGCCAGCCAACGTaGGCATGGAAAGTAGTACGT +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFHCQPT*AWKVVR
Trigger: ACGTACTACTTTCCATGCCAACGTTGGCTGGCAGTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELSLFV*EDFRRV
Trigger: GACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLSLFV*EDFRRV
Trigger: GACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAATGATGATGAAGATGTaGGCATCTGTCCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRMMMKM*ASVPAA
Trigger: TGCTGCTGGGACAGATGCCAACATCTTCATCATCAT...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTATGATGATGAAGATGTaGGCATCTGTCCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAMMMKM*ASVPAA
Trigger: TGCTGCTGGGACAGATGCCAACATCTTCATCATCAT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTTCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PQRWQATDRMGKSRSLHPSRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAAAAGACCATTCGAGA...AGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTTCCTCTCTCGAACTaGTTGGTCCGGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVPLSN*LVRFSD
Trigger: GTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAATAATTGGGCCCTCTaGAACGTAGTCAGCCATGGG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERNNWAL*NVVSHG
Trigger: CCCATGGCTGACTACGTTCAAGAGGGCCCAATTATT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCCGTCGCCTCTGTCCTaGGCCAGCCAGCAGTTACAG +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVPSPLS*ASQQLQ
Trigger: CTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACGG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCGTCGCCTCTGTCCTaGGCCAGCCAGCAGTTACAG +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASPSPLS*ASQQLQ
Trigger: CTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACGG...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAACCTGGCTTTCTTTTaGTCCAGCTGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANANLAFF*SSCISS
Trigger: AGAGGAGATGCAGCTGGACAAAAAGAAAGCCAGGTT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAACCTGGCTTTCTTTTaGTCCAGCTGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGNLAFF*SSCISS
Trigger: AGAGGAGATGCAGCTGGACAAAAAGAAAGCCAGGTT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVIRIRI*VNGAMS
Trigger: AGACATTGCTCCATTCACCAAGATGCGGATCCGGAT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEIRIRI*VNGAMS
Trigger: AGACATTGCTCCATTCACCAAGATGCGGATCCGGAT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCACACCAGGGTCTTCTaGCCCTTCCGCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLHTRVF*PFRWDS
Trigger: GCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTG...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCAAACTTGTTCCAGTTaGCCGACTGCTTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFQTCSS*PTASGP
Trigger: TGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTTGTTCCGCTCAAACTaGTTCCAGTTTGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSELFRSN*FQFADC
Trigger: GCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTGTTCCGCTCAAACTaGTTCCAGTTTGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLFRSN*FQFADC
Trigger: GCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCACAGATCTTGTTGTaGGCACAGGCAAAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSQILL*AQAKSR
Trigger: CCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCACAGATCTTGTTGTaGGCACAGGCAAAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWSQILL*AQAKSR
Trigger: CCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAGCTCATCACAGATCTaGTTGTTGGCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSSSQI*LLAQAK
Trigger: CTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGATGGTGATGGTCTaGACATGCCAGGCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERVMVMV*TCQASS
Trigger: AGAACTTGCCTGGCATGTCAAGACCATCACCATCAC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTACTTCCTCTTCCTCTaGAGGGGGATGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFYFLFL*RGMRQS
Trigger: TGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTG +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAKLSVV*VTSNTL
Trigger: CAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTG +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGKLSVV*VTSNTL
Trigger: CAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTT...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: YPLGEDSISHPHSAASPSTRLWT*LAKLSV
Trigger: GACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGT...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCGATTATGCCGGGTTaGAACCACTTGTTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSIMPG*NHLLLG
Trigger: TCCCAACAACAAGTGGTTCAAACCCGGCATAATCGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGCATCCAGCCAGCGGTaGCAATTGAAGTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERASSQR*QLKLYL
Trigger: CAAGTACAACTTCAATTGCAACCGCTGGCTGGATGC...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGGCATCCAGCCAGCGGTaGCAATTGAAGTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVASSQR*QLKLYL
Trigger: CAAGTACAACTTCAATTGCAACCGCTGGCTGGATGC...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCCCTCACTATCTCATaGTCATCCTCATTGGCATCC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSLTIS*SSSLAS
Trigger: GGATGCCAATGAGGATGACAATGAGATAGTGAGGGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGAGTGAACTCGTCAGCATaGCCCTTTTCAAACAGGTCT +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRVNSSA*PFSNRS
Trigger: AGACCTGTTTGAAAAGGGCAATGCTGACGAGTTCAC...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGTGAACTCGTCAGCATaGCCCTTTTCAAACAGGTCT +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGVNSSA*PFSNRS
Trigger: AGACCTGTTTGAAAAGGGCAATGCTGACGAGTTCAC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCCATCATCCTTATCCTaGTCCAACCACCTGAGACAT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAPSSLS*SNHLRH
Trigger: ATGTCTCAGGTGGTTGGACAAGGATAAGGATGATGG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTGCCCCTGCTCAAATTaGTTGGACTTGTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGCPCSN*LDLSDF
Trigger: GAAGTCAGACAAGTCCAACAAATTTGAGCAGGGGCA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGATGTCAGGATTTCACACTGCCAGCCAACGTaGGCATGGAAAGTAGTACCC +
Preference number: 5 (lower is better)
Translates to: ATDRMGKSRSLHPDVRISHCQPT*AWKVVP
Trigger: GGGTACTACTTTCCATGCCAACGTTGGCTGGCAGTG...TGAAATCCTGACATCAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS GCA 90 bp CACCATTTAGGTGTGAAGAGGGCCATATGGATCACACCATGTGAATaGACACACTGCTCCATGCACGGGAGGAAGCAGACCACACCAGGA +
Preference number: 5 (lower is better)
Translates to: HHLGVKRAIWITPCE*THCSMHGRKQTTPG
Trigger: TCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATATGGCCCTCTTCACACCTAAATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000419859.1
CDS GCA 90 bp CCATCCGCTTTCTTCTCATCCAGCCAGTTGCTACAAGGGAAGGTCTaGTGGATACCAGTGAAGGGGCACAGAATCACCACCTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: PSAFFSSSQLLQGKV*WIPVKGHRITTFSQ
Trigger: CTGTGAGAAGGTGGTGATTCTGTGCCCCTTCACTGGTATCCAGCAGACCTTCCCTTGTAGCAACTGGCTGGATGAGAAGAAAGCGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp ATGGTACCGGGCCATGCCCATGATCCTGCGCACTGTTGGGCCTTCTaGAGTCATTTCCCTCACTATCTCATTGTCATCCTCATTGGCATC +
Preference number: 5 (lower is better)
Translates to: MVPGHAHDPAHCWAF*SHFPHYLIVILIGI
Trigger: GATGCCAATGAGGATGACAATGAGATAGTGAGGGAAATGACTGCAGAAGGCCCAACAGTGCGCAGGATCATGGGCATGGCCCGGTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp GGGAGGCAGACTTCCTCTCAAAGAACTGCTTCTGTTCCCTCTTGTTaGTACACAGATACTTCTGCTGGGTGCACACGGCATCGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: GRQTSSQRTASVPSC*YTDTSAGCTRHRSH
Trigger: ATGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCAGTTCTTTGAGAGGAAGTCTGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 90 bp AATGGTCTTTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGCACCGTCTTTATCCGGGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: NGLFVILRGGKPPIA*ESQGLCTVFIREEP
Trigger: AGGCTCCTCCCGGATAAAGACGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 90 bp CTGTCTTGCCTTTCTCTCCATAGATCTGCATGTAGACTCGGGCACTaGTGCCTGCGCCACCCACATCTCCTGTCCAAATCTCAACCTCAT +
Preference number: 5 (lower is better)
Translates to: LSCLSLHRSACRLGH*CLRHPHLLSKSQPH
Trigger: ATGAGGTTGAGATTTGGACAGGAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCTACATGCAGATCTATGGAGAGAAAGGCAAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGAGGTTGTCGAGGGGGTaGTTGTCACCGCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLRLSRG*LSPPPL
Trigger: TAGGGGAGGCGGTGACAACAACCCCCTCGACAACCT...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTGCTCCAGGGCCAGGTaGTCGAGGGGGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVCSRAR*SRGLLS
Trigger: TGACAACAACCCCCTCGACAACCTGGCCCTGGAGCA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGTGCTCCAGGGCCAGGTaGTCGAGGGGGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLCSRAR*SRGLLS
Trigger: TGACAACAACCCCCTCGACAACCTGGCCCTGGAGCA...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCAAACTTATCGCTGTTaGTCTTGGAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGQTYRC*SWRTSG
Trigger: TCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCATGATGATGAAGATGTaGGCATCTGTCCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VILRGGKPPIAWESQGLCMMMKM*ASVPAA
Trigger: TGCTGCTGGGACAGATGCCAACATCTTCATCATCAT...GCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTCTGTTCCCTCTTGTaGGTACACAGATACTTCTGC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAFCSLL*VHRYFC
Trigger: GCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCCTGTGCTTCTGTTCCCTCTaGTTGGTACACAGATACTTC +
Preference number: 5 (lower is better)
Translates to: LRGGKPPIAWESQGLCTLCFCSL*LVHRYF
Trigger: GAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCA...CAGGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTGCTTCTGTTCCCTCTaGTTGGTACACAGATACTTC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGCFCSL*LVHRYF
Trigger: GAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAAAAGACCATTCGAGA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAAAAGACCATTCGAGA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCGTTCCTCTCTCGAACTaGTTGGTCCGGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LGEDSISHPHSAASPSLVVPLSN*LVRFSD
Trigger: GTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAAC...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTCGACATCGGCCATCTaGGAGCTCAGGGCGATCTCC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVSTSAI*ELRAIS
Trigger: GGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCGA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAATAATTGGGCCCTCTaGAACGTAGTCAGCCATGGG +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFNNWAL*NVVSHG
Trigger: CCCATGGCTGACTACGTTCAAGAGGGCCCAATTATT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCCCAGCTCTATTTTCTaGATGATGCCCACATCCAAG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVPSSIF*MMPTSK
Trigger: CTTGGATGTGGGCATCATCAAGAAAATAGAGCTGGG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS-3UTR CAA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCAGTTCAACATGTACTaGGTGCCCTGGGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: YPLGEDSISHPHSAASPSQFNMY*VPWVGT
Trigger: AGTGCCCACCCAGGGCACCAAGTACATGTTGAACTG...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAACCTGGCTTTCTTTTaGTCCAGCTGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERNLAFF*SSCISS
Trigger: AGAGGAGATGCAGCTGGACAAAAAGAAAGCCAGGTT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATTGAATGTGTCCGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLNVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACGGACACATTCAA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTGAATGTGTCCGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGLNVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACGGACACATTCAA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGCTCATCACAGATCTaGTTGTTGGCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVSSSQI*LLAQAK
Trigger: CTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LGEDSISHPHSAASPSLVQASSL*GINRSS
Trigger: GGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTG...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTTAAAGAAGTACACATaGCCGTACTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANALKKYT*PYSISV
Trigger: CACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATTAAAGAAGTACACATaGCCGTACTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLKKYT*PYSISV
Trigger: CACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTGTAACCTCGAATACCTaGAAGTACTTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAVTSNT*KYFLFL
Trigger: GAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTAC...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTG +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEKLSVV*VTSNTL
Trigger: CAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTG +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVKLSVV*VTSNTL
Trigger: CAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCGGTTTGAACCACTTGTaGTTGGGATTCAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGGLNHL*LGFRRI
Trigger: GATTCTCCTGAATCCCAACAACAAGTGGTTCAAACC...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTCGATTATGCCGGGTTaGAACCACTTGTTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESIMPG*NHLLLG
Trigger: TCCCAACAACAAGTGGTTCAAACCCGGCATAATCGA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GCCCCCAGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGAAGTTGTACTTGTCTTaGTTCAGAGTGTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: APSANARGFEGLLTAKVEKLYLS*FRVFIR
Trigger: CCTGATGAACACTCTGAACAAAGACAAGTACAACTT...CTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAGCTGGAATGTGTCCTaGGACGCCCGTTCAAAAACT +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSWNVS*DARSKT
Trigger: AGTTTTTGAACGGGCGTCCAAGGACACATTCCAGCT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGACCCTGCTCAAATTTGTaGGACTTGTCTGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRPCSNL*DLSDFF
Trigger: GAAGAAGTCAGACAAGTCCAACAAATTTGAGCAGGG...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS TCA 90 bp ACCACTGGCGGTCACCTTCCACCTTGCTCAGCCAGTTGTTGCAGTTaGAGTAGTAACGGAGATGAGGCCTCTTCATGTCGGTCACAATCA +
Preference number: 5 (lower is better)
Translates to: TTGGHLPPCSASCCS*SSNGDEASSCRSQS
Trigger: TGATTGTGACCGACATGAAGAGGCCTCATCTCCGTTACTACTTCAACTGCAACAACTGGCTGAGCAAGGTGGAAGGTGACCGCCAGTGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp CTCGTTGGTGTCATTCCAGATCTCCACCTTCTCCACGTACCAGTCTaGGCACCACTTGGAGTTGTCATGGCGGAGCTTGATCTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LVGVIPDLHLLHVPV*APLGVVMAELDLVD
Trigger: ATCTACAAGATCAAGCTCCGCCATGACAACTCCAAGTGGTGCGCAGACTGGTACGTGGAGAAGGTGGAGATCTGGAATGACACCAACGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TACACATTGCCGTACTCCATCTCGGTGATGGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTGGGGATAAACCGGTCTTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: YTLPYSISVMVMVLT*QASSLLGINRSSLA
Trigger: TGCCAGGGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTGGCATGTCAAGACCATCACCATCACCGAGATGGAGTACGGCAATGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TCTTGCCTTTCTCTCCATAGATCTGCATGTAGACTCGGGCACTGGTaGCTGCGCCACCCACATCTCCTGTCCAAATCTCAACCTCATAGT +
Preference number: 5 (lower is better)
Translates to: SCLSLHRSACRLGHW*LRHPHLLSKSQPHS
Trigger: ACTATGAGGTTGAGATTTGGACAGGAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCTACATGCAGATCTATGGAGAGAAAGGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp GGCTGTGTGTCCTCAGATCCTAGCACCAGGCATCTGCCTCCTGCCTaGCCTGACCTGTGCGTTTATATAATTTATCCCAGGTCATTTGAC +
Preference number: 5 (lower is better)
Translates to: GCVSSDPSTRHLPPA*PDLCVYIIYPRSFD
Trigger: GTCAAATGACCTGGGATAAATTATATAAACGCACAGGTCAGGCCAGGCAGGAGGCAGATGCCTGGTGCTAGGATCTGAGGACACACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452425.2
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTCTGTTCCCTCTTGTaGGTACACAGATACTTCTGC +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVFCSLL*VHRYFC
Trigger: GCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGTTCTGTTCCCTCTTGTaGGTACACAGATACTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEFCSLL*VHRYFC
Trigger: GCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAA...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAAAAGACCATTCGAGA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAGGGTCATGAAGATGTaGGAGTCAGTGCCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVRVMKM*ESVPPP
Trigger: TGGCGGGGGCACTGACTCCAACATCTTCATGACCCT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTAGCTCATCACAGATCTaGTTGTTGGCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFSSSQI*LLAQAK
Trigger: CTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCT...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGTTAAAGAAGTACACATaGCCGTACTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERLKKYT*PYSISV
Trigger: CACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVTRLWT*LAKLSV
Trigger: GACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGT...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTTGCCTGTGTCTCCGTaGGCCCCAAAGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVLPVSP*APKMVT
Trigger: CGTGACCATCTTTGGGGCCAACGGAGACACAGGCAA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTTTGCCTGTGTCTCCGTaGGCCCCAAAGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASLPVSP*APKMVT
Trigger: CGTGACCATCTTTGGGGCCAACGGAGACACAGGCAA...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATTGAACCACTTGTTGTaGGGATTCAGGAGAATCTCA +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRLNHLL*GFRRIS
Trigger: TGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGAGCCAGCGGTTGCAATaGAAGTTGTACTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERSQRLQ*KLYLSL
Trigger: CAAAGACAAGTACAACTTCAATTGCAACCGCTGGCT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGCCAGCGGTTGCAATaGAAGTTGTACTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSESQRLQ*KLYLSL
Trigger: CAAAGACAAGTACAACTTCAATTGCAACCGCTGGCT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCCATCATCCTTATCCTaGTCCAACCACCTGAGACAT +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFPSSLS*SNHLRH
Trigger: ATGTCTCAGGTGGTTGGACAAGGATAAGGATGATGG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCAAATTTGTTGGACTaGTCTGACTTCTTCAGGGGT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASNLLD*SDFFRG
Trigger: ACCCCTGAAGAAGTCAGACAAGTCCAACAAATTTGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp AGTGCCAATGCTAGAGGCTTTGAAGGGCTGCTGACCGCCAAGGTGGAGGGCAGATCAAATTTGTTGGACTaGTCTGACTTCTTCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SANARGFEGLLTAKVEGRSNLLD*SDFFRG
Trigger: ACCCCTGAAGAAGTCAGACAAGTCCAACAAATTTGA...TCTGCCCTCCACCTTGGCGGTCAGCAGCCCTTCAAAGCCTCTAGCATTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGCCCTGCTCAAATTTGTaGGACTTGTCTGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEPCSNL*DLSDFF
Trigger: GAAGAAGTCAGACAAGTCCAACAAATTTGAGCAGGG...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGGATGTTCACTTGAGATaGGGGTTTTGCCATTTAGCC +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEDVHLR*GFCHLA
Trigger: GGCTAAATGGCAAAACCCCAATCTCAAGTGAACATC...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTCCATGATGTTCACTaGAGATTGGGGTTTTGCCAT +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGFHDVH*RLGFCH
Trigger: ATGGCAAAACCCCAATCTCAAGTGAACATCATGGAA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398686.8
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGATATCCCTTTGGATTTaGCCATCGTCTTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERISLWI*PSSSSK
Trigger: CTTGGACGAAGACGATGGCAAAATCCAAAGGGATAT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS TCA 90 bp CAAGCCGGACTTTCCACAGGTCTCCCAGATCCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCCTCTCAAACTTATCGCTGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: QAGLSTGLPDPASPP*RFQCCPSQTYRCLS
Trigger: AGACAAACAGCGATAAGTTTGAGAGGGACAGCATTGAAATCTTCACGGTGGAGACGCTGGATCTGGGAGACCTGTGGAAAGTCCGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 90 bp GAAGAGGAAACAAAAGCCCATAAAGATGGCATGACTTGTCCAGGGTaGCCTGATGAGTTTCTGGCAGAGGTCAGACTCCAGGTCAGGACC +
Preference number: 5 (lower is better)
Translates to: EEETKAHKDGMTCPG*PDEFLAEVRLQVRT
Trigger: GGTCCTGACCTGGAGTCTGACCTCTGCCAGAAACTCATCAGGTCACCCTGGACAAGTCATGCCATCTTTATGGGCTTTTGTTTCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS GCA 90 bp TTCATAGAGAACCTCTATTTTCTTGATGATGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCACAGAGCCACGGCTGAAGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: FIENLYFLDDAHIQA*DVELLHRATAEAPL
Trigger: AAGAGGGGCTTCAGCCGTGGCTCTGTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGCATCATCAAGAAAATAGAGGTTCTCTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000582408.6
CDS CCA 90 bp CATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTaGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCTCTGCACCGT +
Preference number: 5 (lower is better)
Translates to: HMEPVLEWSFCHPQR*QATDRMGKSRSLHR
Trigger: ACGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTAACGCCATTCTCTGTTaGTTCCTGTGGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTNAILC*FLWVSW
Trigger: CCAGCTGACCCACAGGAACAAACAGAGAATGGCGTT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTTGTCGAGGGGGTTGTaGTCACCGCCTCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLSRGL*SPPPLP
Trigger: GGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCAAACTTATCGCTGTTaGTCTTGGAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFQTYRC*SWRTSG
Trigger: TCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGGGGCCTTGCCTGTGTaGTCATGGCCAAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASGALPV*SWPSRT
Trigger: AGTCCGGCTTGGCCATGACAACACAGGCAAGGCCCC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCCTCTCTCGAACTTGTaGGTCCGGTTCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTPLSNL*VRFSDL
Trigger: CAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCCCCAGCTCTATTTTCTaGATGATGCCCACATCCAAG +
Preference number: 5 (lower is better)
Translates to: LGEDSISHPHSAASPSLVPSSIF*MMPTSK
Trigger: CTTGGATGTGGGCATCATCAAGAAAATAGAGCTGGG...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCACACCAGGGTCTTCTaGCCCTTCCGCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCHTRVF*PFRWDS
Trigger: GCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAAACTTGTTCCAGTTaGCCGACTGCTTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTQTCSS*PTASGP
Trigger: TGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCTTGTTCCGCTCAAACTaGTTCCAGTTTGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: YPLGEDSISHPHSAASPSLFRSN*FQFADC
Trigger: GCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAA...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTTTGAATGTGTCCGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFLNVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACGGACACATTCAA...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTCAGCTCATCACAGATCTaGTTGTTGGCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LGEDSISHPHSAASPSLVSSSQI*LLAQAK
Trigger: CTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCT...GACCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCTGGTTTCGCCTCCGTaGCCCGTTTCTATGACGATC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVLVSPP*PVSMTI
Trigger: GATCGTCATAGAAACGGGCAACGGAGGCGAAACCAG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTQASSL*GINRSS
Trigger: GGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTGTAACCTCGAATACCTaGAAGTACTTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFVTSNT*KYFLFL
Trigger: GAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTAC...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398686.8
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTGCTTCAGCTCCCGCTaGCCTGTGTCTCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQCFSSR*PVSPLA
Trigger: GGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTGCTTCAGCTCCCGCTaGCCTGTGTCTCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASCFSSR*PVSPLA
Trigger: GGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGTTGAACCACTTGTTGTaGGGATTCAGGAGAATCTCA +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVLNHLL*GFRRIS
Trigger: TGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAA...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTACAAGAAGAACTTGCTaGATGGTGTCAGATTTATCC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANATRRTC*MVSDLS
Trigger: GGATAAATCTGACACCATCAAGCAAGTTCTTCTTGT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGACAAGAAGAACTaGCTTGATGGTGTCAGATTT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANARDKKN*LDGVRF
Trigger: AAATCTGACACCATCAAGCAAGTTCTTCTTGTCTCT...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCAGCCTGGTCACTACTaGCGCAGCTCACCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCQPGHY*RSSPSS
Trigger: GGAGCTGGGTGAGCTGCGCAAGTAGTGACCAGGCTG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS TCA 90 bp TCAGGAGAATCTCATCTGTCCGCCCCTTCTGCCCATAAATCTGGATaGAGATGGGAGAGTTGGTACCAGCTTTCTTTAGGTCGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SGESHLSAPSAHKSG*RWESWYQLSLGRLS
Trigger: GGACAACCGACCTAAAGAAAGCTGGTACCAACTCTCCCATCTTCATCCAGATTTATGGGCAGAAGGGGCGGACAGATGAGATTCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp CTCGTTGTTCATGTCAGTAATGTCTATTCTGTCCAGGAACCAGCCTaGTCTGTTGCCTGTGTTGTCGTGGCGAATCCGAATCTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: LVVHVSNVYSVQEPA*SVACVVVANPNLGQ
Trigger: CTGACCAAGATTCGGATTCGCCACGACAACACAGGCAACAGAGCAGGCTGGTTCCTGGACAGAATAGACATTACTGACATGAACAACGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000419859.1
ENST00000441551.6
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp GTTCAAAAACTTTTGAGCGGCTGGAGAGGAAGAGCACTTCTGTCTTaGCTTTCTCTCCATAGATCTGCATGTAGACTCGGGCACTGGTGC +
Preference number: 5 (lower is better)
Translates to: VQKLLSGWRGRALLS*LSLHRSACRLGHWC
Trigger: GCACCAGTGCCCGAGTCTACATGCAGATCTATGGAGAGAAAGGCAAGACAGAAGTGCTCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 90 bp GCTGGAATGTGTCCTTGGACGCCCGTTCAAAAACTTTTGAGCGGCTaGAGAGGAAGAGCACTTCTGTCTTGCCTTTCTCTCCATAGATCT +
Preference number: 5 (lower is better)
Translates to: AGMCPWTPVQKLLSG*RGRALLSCLSLHRS
Trigger: AGATCTATGGAGAGAAAGGCAAGACAGAAGTGCTCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGGGCGTCCAAGGACACATTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGGGGCCTTGCCTGTGTaGTCATGGCCAAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRGALPV*SWPSRT
Trigger: AGTCCGGCTTGGCCATGACAACACAGGCAAGGCCCC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQNQPGA*PVLSWP
Trigger: TGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGTTCCTCTCTCGAACTaGTTGGTCCGGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVVPLSN*LVRFSD
Trigger: GTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAAC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCAGTCTGCGCACCACTaGGAGTTGTCATGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCQSAHH*ELSWRS
Trigger: GCTCCGCCATGACAACTCCAAGTGGTGCGCAGACTG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTCTGCGCACCACTaGGAGTTGTCATGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: PLATGFIETGEKYTLLSKQSAHH*ELSWRS
Trigger: GCTCCGCCATGACAACTCCAAGTGGTGCGCAGACTG...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGAGGAACTCGTCCTCGTaGGTGTCATTCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLRNSSS*VSFQIS
Trigger: GGAGATCTGGAATGACACCAACGAGGACGAGTTCCT...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTCAGTGGCCGCGTCCTaGTGCTTCCCAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCSVAAS*CFPVVT
Trigger: AGTCACCACTGGGAAGCACAAGGACGCGGCCACTGA...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVGNIPL*SCQTLS
Trigger: GCTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCCGTCACCCTCACTCTaGGAGAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASPSPSL*ESQQSH
Trigger: GTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTTCACAGATCTTGTTGTaGGCACAGGCAAAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASSQILL*AQAKSR
Trigger: CCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGA...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTTACTTCCTCTTCCTCTaGAGGGGGATGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASYFLFL*RGMRQS
Trigger: TGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTA...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTTCAGCTCCCGCTaGCCTGTGTCTCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRCFSSR*PVSPLA
Trigger: GGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTGCTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAAGTTGTACTTGTCTTaGTTCAGAGTGTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: LLTAKVEGRNVRLGHLSEKLYLS*FRVFIR
Trigger: CCTGATGAACACTCTGAACAAAGACAAGTACAACTT...CTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTCAATTGAAGTTGTACTaGTCTTTGTTCAGAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANAQLKLY*SLFRVF
Trigger: GAACACTCTGAACAAAGACAAGTACAACTTCAATTG...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCCAATTGAAGTTGTACTaGTCTTTGTTCAGAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGQLKLY*SLFRVF
Trigger: GAACACTCTGAACAAAGACAAGTACAACTTCAATTG...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGCGGTTGCAATTGAAGTaGTACTTGTCTTTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRLQLK*YLSLFR
Trigger: TCTGAACAAAGACAAGTACAACTTCAATTGCAACCG...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTGACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGACAAGAAGAACTTGCTaGATGGTGTCAGATTTATCC +
Preference number: 5 (lower is better)
Translates to: LTAKVEGRNVRLGHLSERTRRTC*MVSDLS
Trigger: GGATAAATCTGACACCATCAAGCAAGTTCTTCTTGT...CCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp ACCGCCAAGGTGGAGGGCAGAAATGTGAGATTGGGGCATCTCAGTGAGAGGGTGAGAGACAAGAAGAACTaGCTTGATGGTGTCAGATTT +
Preference number: 5 (lower is better)
Translates to: TAKVEGRNVRLGHLSERVRDKKN*LDGVRF
Trigger: AAATCTGACACCATCAAGCAAGTTCTTCTTGTCTCT...CACCCTCTCACTGAGATGCCCCAATCTCACATTTCTGCCCTCCACCTTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTTGAGATTGGGGTTTaGCCATTTAGCCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: YPLGEDSISHPHSAASPSLEIGV*PFSLRC
Trigger: ACACCTCAGGCTAAATGGCAAAACCCCAATCTCAAG...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR CAA 90 bp GGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTCACCAGTGTATACCTaGACTTCATACTTATTACCT +
Preference number: 5 (lower is better)
Translates to: GPHEVLSGLLAPSANARGSPVYT*TSYLLP
Trigger: AGGTAATAAGTATGAAGTCAAGGTATACACTGGTGA...GCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp GGAGCAGGACCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTTCACCAGTGTATACCTaGACTTCATACTTATTACCT +
Preference number: 5 (lower is better)
Translates to: GAGPHEVLSGLLAPSANASPVYT*TSYLLP
Trigger: AGGTAATAAGTATGAAGTCAAGGTATACACTGGTGA...AGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGGTCCTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS GCA 90 bp GATCTCGTAAGGAACAAATGGTGTGTACAGCCTCGTCTGAAGCTCTaGATGGAAGAGGTCTCTGATGATGGACCCGTCGTCTTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: DLVRNKWCVQPRLKL*MEEVSDDGPVVFVF
Trigger: AAAAACGAAGACGACGGGTCCATCATCAGAGACCTCTTCCATGCAGAGCTTCAGACGAGGCTGTACACACCATTTGTTCCTTACGAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TCTAACTCTACGATGAAGCGGGAGGCAGACTTCCTCTCAAAGAACTaGTTCTGTTCCCTCTTGTTGGTACACAGATACTTCTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SNSTMKREADFLSKN*FCSLLLVHRYFCWV
Trigger: CACCCAGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCAGTTCTTTGAGAGGAAGTCTGCCTCCCGCTTCATCGTAGAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 90 bp TCAGATCCTAGCACCAGGCATCTGCCTCCTGCCTGGCCTGACCTGTaGGTTTATATAATTTATCCCAGGTCATTTGACCAGTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: SDPSTRHLPPAWPDL*VYIIYPRSFDQLEM
Trigger: CATCTCTAACTGGTCAAATGACCTGGGATAAATTATATAAACGCACAGGTCAGGCCAGGCAGGAGGCAGATGCCTGGTGCTAGGATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452425.2
CDS CCA 90 bp CCCCCGGACATCCCCAGTGAAGACGGTGACAATATACGTAATAGCTaGTGTGGAAACAACAGGAAAGAGAGTGTTCAATGTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: PPDIPSEDGDNIRNS*CGNNRKESVQCELH
Trigger: ATGCAGCTCACATTGAACACTCTCTTTCCTGTTGTTTCCACACCAGCTATTACGTATATTGTCACCGTCTTCACTGGGGATGTCCGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335730.6
CDS CCA 90 bp TCTGGAATGTGTCCTTGGACGCCCGTTCAAAAACTTTTGAGCGGCTaGAGAGGAAGAGCACTTCTGTCTTGCCTTTCTCTCCATAGATCT +
Preference number: 5 (lower is better)
Translates to: SGMCPWTPVQKLLSG*RGRALLSCLSLHRS
Trigger: AGATCTATGGAGAGAAAGGCAAGACAGAAGTGCTCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGGGCGTCCAAGGACACATTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441551.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGGCGAATCCGAATCTaGGTCAGGGCCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRWRIRI*VRAPRS
Trigger: TGACCTGGGGGCCCTGACCAAGATTCGGATTCGCCA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAAGGTTGTCGAGGGGGTaGTTGTCACCGCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRRLSRG*LSPPPL
Trigger: TAGGGGAGGCGGTGACAACAACCCCCTCGACAACCT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVLSLFV*EDFRRV
Trigger: GACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASLSLFV*EDFRRV
Trigger: GACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAA...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CCTGTGAAGATCTGCACCGAGTACAGCACAATGTCCAGAGGCTCTTCTACTTCCCAAACTTATCGCTGTTaGTCTTGGAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: PVKICTEYSTMSRGSSTSQTYRC*SWRTSG
Trigger: TCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTG...GGAAGTAGAAGAGCCTCTGGACATTGTGCTGTACTCGGTGCAGATCTTCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGCGCACCACTTGGAGTaGTCATGGCGGAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQAHHLE*SWRSLI
Trigger: GATCAAGCTCCGCCATGACAACTCCAAGTGGTGCGC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGGCGCACCACTTGGAGTaGTCATGGCGGAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: PLATGFIETGEKYTLLSKAHHLE*SWRSLI
Trigger: GATCAAGCTCCGCCATGACAACTCCAAGTGGTGCGC...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATCAGTGGCCGCGTCCTaGTGCTTCCCAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRSVAAS*CFPVVT
Trigger: AGTCACCACTGGGAAGCACAAGGACGCGGCCACTGA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGAGGGTCATGAAGATGTaGGAGTCAGTGCCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: PLATGFIETGEKYTLLSKRVMKM*ESVPPP
Trigger: TGGCGGGGGCACTGACTCCAACATCTTCATGACCCT...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACACACCAGGGTCTTCTaGCCCTTCCGCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRHTRVF*PFRWDS
Trigger: GCTGTCCCAGCGGAAGGGCAAGAAGACCCTGGTGTG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACCGTCACCCTCACTCTaGGAGAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRPSPSL*ESQQSH
Trigger: GTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTAGCTCATCACAGATCTaGTTGTTGGCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTSSSQI*LLAQAK
Trigger: CTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCGTAACCTCGAATACCTaGAAGTACTTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YPLGEDSISHPHSAASPSVTSNT*KYFLFL
Trigger: GAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTAC...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTG +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTKLSVV*VTSNTL
Trigger: CAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTT...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASTRLWT*LAKLSV
Trigger: GACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCACGATGACTTCGTACTaGACGGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASTMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGACGATGACTTCGTACTaGACGGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PLATGFIETGEKYTLLSKTMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGT...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTTGCCTGTGTCTCCGTaGGCCCCAAAGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASLPVSP*APKMVT
Trigger: CGTGACCATCTTTGGGGCCAACGGAGACACAGGCAA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCCCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCPRSKR*RIFCFS
Trigger: GCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGG...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCCTGGTTGCCACTGGGTTTATaGAAACTGGGGAAAAGTATA +
Preference number: 5 (lower is better)
Translates to: PWVKTQFLIHTLQQVPAWLPLGL*KLGKSI
Trigger: TATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA...CCAGGCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCCCATGAAGTTCTCAGTGGACTGCTAGCCCCCAGTGCCAATGCTAGAGGCTTTCGGTTGCAATTGAAGTaGTACTTGTCTTTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: PHEVLSGLLAPSANARGFRLQLK*YLSLFR
Trigger: TCTGAACAAAGACAAGTACAACTTCAATTGCAACCG...AAAGCCTCTAGCATTGGCACTGGGGGCTAGCAGTCCACTGAGAACTTCATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536736.5
ENST00000642948.1
CDS TCA 90 bp TGCTATGAGCTGGTGCTGTGCAAATCCAAAGTGACTGTCAGAAACTaGAGACGGATTTGCCCACCATTTAGGTGTGAAGAGGGCCATATG +
Preference number: 5 (lower is better)
Translates to: CYELVLCKSKVTVRN*RRICPPFRCEEGHM
Trigger: CATATGGCCCTCTTCACACCTAAATGGTGGGCAAATCCGTCTTCAGTTTCTGACAGTCACTTTGGATTTGCACAGCACCAGCTCATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000419859.1
CDS GCA 90 bp ATAGCTGGTGTGGAAACAACAGGAAAGAGAGTGTTCAATGTGAGCTaGATCATAATATCCCACCCCCTCCTCCCCTTCCTGGTTACAACA +
Preference number: 5 (lower is better)
Translates to: IAGVETTGKRVFNVS*IIISHPLLPFLVTT
Trigger: TGTTGTAACCAGGAAGGGGAGGAGGGGGTGGGATATTATGATGCAGCTCACATTGAACACTCTCTTTCCTGTTGTTTCCACACCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335730.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAAACTTATCGCTGTTaGTCTTGGAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTQTYRC*SWRTSG
Trigger: TCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTG...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRNQPGA*PVLSWP
Trigger: TGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGTCCGGTTCTCTGACTaGCCAAGGTATCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRVRFSD*PRYRSP
Trigger: TGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGAC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATCGACATCGGCCATCTaGGAGCTCAGGGCGATCTCC +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRSTSAI*ELRAIS
Trigger: GGAGATCGCCCTGAGCTCCAAGATGGCCGATGTCGA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTTTGAATGTGTCCGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTLNVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACGGACACATTCAA...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCTGGTTTCGCCTCCGTaGCCCGTTTCTATGACGATC +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASLVSPP*PVSMTI
Trigger: GATCGTCATAGAAACGGGCAACGGAGGCGAAACCAG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp ATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGAAGACTGTAACCTCGAATACCTaGAAGTACTTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: IHHLDGLCFSTSIPWVKTVTSNT*KYFLFL
Trigger: GAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTAC...AGTCTTCACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTG +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASKLSVV*VTSNTL
Trigger: CAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTT...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRPRSKR*RIFCFS
Trigger: GCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTCCCAGCTTAAAATACACCATCTaGATGGCCTCTGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: YPLGEDSISHPHSAASPSLKYTI*MASASP
Trigger: TGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAA...GCTGGGACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCACTGCCAGCCAACGTaGGCATGGAAAGTAGTACCC +
Preference number: 5 (lower is better)
Translates to: PLATGFIETGEKYTLLSKHCQPT*AWKVVP
Trigger: GGGTACTACTTTCCATGCCAACGTTGGCTGGCAGTG...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS TCA 90 bp TTTTCAGTTAAGGAGGGTATTGTGTGGACACCATTGGCTGCACCGTaGGACTCAGAGATTCACAGTATCCCAGATGCCATCTTTCCTATC +
Preference number: 5 (lower is better)
Translates to: FSVKEGIVWTPLAAP*DSEIHSIPDAIFPI
Trigger: GATAGGAAAGATGGCATCTGGGATACTGTGAATCTCTGAGTCTCACGGTGCAGCCAATGGTGTCCACACAATACCCTCCTTAACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414184.1
ENST00000452425.2
CDS TCA 90 bp AAGCCCATTTATCAGAAGAGGAAACAAAAGCCCATAAAGATGGCATaGCTTGTCCAGGGTGACCTGATGAGTTTCTGGCAGAGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: KPIYQKRKQKPIKMA*LVQGDLMSFWQRSD
Trigger: GTCTGACCTCTGCCAGAAACTCATCAGGTCACCCTGGACAAGTCATGCCATCTTTATGGGCTTTTGTTTCCTCTTCTGATAAATGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGCTCTGTTGCCTGTGTaGTCGTGGCGAATCCGAATC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRALLPV*SWRIRI
Trigger: GATTCGGATTCGCCACGACAACACAGGCAACAGAGC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAACCAGCCTGCTCTGTaGCCTGTGTTGTCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRNQPAL*PVLSWR
Trigger: TCGCCACGACAACACAGGCAACAGAGCAGGCTGGTT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTTTCTGTTCCCTCTTGTaGGTACACAGATACTTCTGC +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASFCSLL*VHRYFC
Trigger: GCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAA...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTGCTTCTGTTCCCTCTaGTTGGTACACAGATACTTC +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVCFCSL*LVHRYF
Trigger: GAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAGTCCGGTTCTCTGACTaGCCAAGGTATCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRVRFSD*PRYRSP
Trigger: TGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGAC...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCAGGAACTCGTCCTCGTaGGTGTCATTCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCRNSSS*VSFQIS
Trigger: GGAGATCTGGAATGACACCAACGAGGACGAGTTCCT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAGGGTCATGAAGATGTaGGAGTCAGTGCCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRRVMKM*ESVPPP
Trigger: TGGCGGGGGCACTGACTCCAACATCTTCATGACCCT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCAAACTTGTTCCAGTTaGCCGACTGCTTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASQTCSS*PTASGP
Trigger: TGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGTTGAATGTGTCCGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLLNVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACGGACACATTCAA...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASGNIPL*SCQTLS
Trigger: GCTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQGNIPL*SCQTLS
Trigger: GCTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCCGTCACCCTCACTCTaGGAGAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNPSPSL*ESQQSH
Trigger: GTGTGACTGCTGGCTCTCCAAGAGTGAGGGTGACGG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTCACAGATCTTGTTGTaGGCACAGGCAAAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQSQILL*AQAKSR
Trigger: CCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGTTAAAGAAGTACACATaGCCGTACTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLLKKYT*PYSISV
Trigger: CACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTACTTCCTCTTCCTCTaGAGGGGGATGAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCYFLFL*RGMRQS
Trigger: TGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTA...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAACGATGACTTCGTACTaGACGGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRTMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGCAGCAAGTGATGTTCACTTGAGATaGGGGTTTTGCCATTTAGCC +
Preference number: 5 (lower is better)
Translates to: HFYPLGEDSISHPHSAASDVHLR*GFCHLA
Trigger: GGCTAAATGGCAAAACCCCAATCTCAAGTGAACATC...ACTTGCTGCAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS TCA 90 bp CTATCTCATTGTCATCCTCATTGGCATCCAGCCAGCGGTTGCAATTaGAGTTGTACTTGTCTTTGTTCAGAGTGTTCATCAGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: LSHCHPHWHPASGCN*SCTCLCSECSSGSS
Trigger: GGATGACCCTGATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAATGAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS-3UTR CAA 90 bp CTCAGTGAAGATGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LSEDVIWNQFSNGLFVILLSLFV*EDFRRV
Trigger: GACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAA...GAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACATCTTCACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAATAATTGGGCCCTCTaGAACGTAGTCAGCCATGGG +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQNNWAL*NVVSHG
Trigger: CCCATGGCTGACTACGTTCAAGAGGGCCCAATTATT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACAGTTCAACATGTACTaGGTGCCCTGGGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRQFNMY*VPWVGT
Trigger: AGTGCCCACCCAGGGCACCAAGTACATGTTGAACTG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQIRIRI*VNGAMS
Trigger: AGACATTGCTCCATTCACCAAGATGCGGATCCGGAT...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCIRIRI*VNGAMS
Trigger: AGACATTGCTCCATTCACCAAGATGCGGATCCGGAT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACAAACTTGTTCCAGTTaGCCGACTGCTTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRQTCSS*PTASGP
Trigger: TGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTTGTTCCGCTCAAACTaGTTCCAGTTTGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLFRSN*FQFADC
Trigger: GCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACTGGTTTCGCCTCCGTaGCCCGTTTCTATGACGATC +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLVSPP*PVSMTI
Trigger: GATCGTCATAGAAACGGGCAACGGAGGCGAAACCAG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGACAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRQASSL*GINRSS
Trigger: GGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTG...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCGTGATGGTGATGGTCTaGACATGCCAGGCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCVMVMV*TCQASS
Trigger: AGAACTTGCCTGGCATGTCAAGACCATCACCATCAC...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCGTGATGGTGATGGTCTaGACATGCCAGGCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASVMVMV*TCQASS
Trigger: AGAACTTGCCTGGCATGTCAAGACCATCACCATCAC...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TGCTTCTCCACTTCTATCCCCTGGGTGAAGACTCAATTTCTCATCCACACTCTGTTAAAATACACCATCTaGATGGCCTCTGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: CFSTSIPWVKTQFLIHTLLKYTI*MASASP
Trigger: TGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAA...CAGAGTGTGGATGAGAAATTGAGTCTTCACCCAGGGGATAGAAGTGGAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTTTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATGGGAAAGTCAAGGTCCCAAGCTTAAATGCCTaGGATTTTCAGAACATCTTA +
Preference number: 5 (lower is better)
Translates to: FLSSSEVASHRSHGKVKVPSLNA*DFQNIL
Trigger: TAAGATGTTCTGAAAATCCAAGGCATTTAAGCTTGG...GACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATGCTCTGTTGCCTGTGTaGTCGTGGCGAATCCGAATC +
Preference number: 5 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNALLPV*SWRIRI
Trigger: GATTCGGATTCGCCACGACAACACAGGCAACAGAGC...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACACTGCCAGCCAACGTaGGCATGGAAAGTAGTACGT +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRHCQPT*AWKVVR
Trigger: ACGTACTACTTTCCATGCCAACGTTGGCTGGCAGTG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCATGATGATGAAGATGTaGGCATCTGTCCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCMMMKM*ASVPAA
Trigger: TGCTGCTGGGACAGATGCCAACATCTTCATCATCAT...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp TGTCATATGGAACCAGTTCTCGAATGGTCTTTTTGTCATCCTCAGAGGTGGCAATTCTGTTCCCTCTTGTaGGTACACAGATACTTCTGC +
Preference number: 5 (lower is better)
Translates to: CHMEPVLEWSFCHPQRWQFCSLL*VHRYFC
Trigger: GCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAA...TTGCCACCTCTGAGGATGACAAAAAGACCATTCGAGAACTGGTTCCATATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS-3UTR CAA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGTCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PLATGFIETGEKYTLLSKSRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAAAAGACCATTCGAGA...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGACCTCTCTCGAACTTGTaGGTCCGGTTCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRPLSNL*VRFSDL
Trigger: CAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGG...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCCCAGCTCTATTTTCTaGATGATGCCCACATCCAAG +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQPSSIF*MMPTSK
Trigger: CTTGGATGTGGGCATCATCAAGAAAATAGAGCTGGG...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAACCTGGCTTTCTTTTaGTCCAGCTGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASNLAFF*SSCISS
Trigger: AGAGGAGATGCAGCTGGACAAAAAGAAAGCCAGGTT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGAACCTGGCTTTCTTTTaGTCCAGCTGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PLATGFIETGEKYTLLSKNLAFF*SSCISS
Trigger: AGAGGAGATGCAGCTGGACAAAAAGAAAGCCAGGTT...CTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRIRIRI*VNGAMS
Trigger: AGACATTGCTCCATTCACCAAGATGCGGATCCGGAT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGCTCATCACAGATCTaGTTGTTGGCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASSSSQI*LLAQAK
Trigger: CTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCT...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTTGGGCAGCCACAGATTATGACACATGCTAATTATTATCACTGTAGGTTCAATCTGGTTTCGCCTCCGTaGCCCGTTTCTATGACGATC +
Preference number: 5 (lower is better)
Translates to: FGQPQIMTHANYYHCRFNLVSPP*PVSMTI
Trigger: GATCGTCATAGAAACGGGCAACGGAGGCGAAACCAG...ATTGAACCTACAGTGATAATAATTAGCATGTGTCATAATCTGTGGCTGCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS-3UTR CAA 90 bp CTTAAAATACACCATCTTGATGGCCTCTGCTTCTCCACTTCTATCCCCTGGGTGTTGCCACTGGGTTTATaGAAACTGGGGAAAAGTATA +
Preference number: 5 (lower is better)
Translates to: LKIHHLDGLCFSTSIPWVLPLGL*KLGKSI
Trigger: TATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA...CACCCAGGGGATAGAAGTGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCCAAACTTATCGCTGTTaGTCTTGGAGGACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASQTYRC*SWRTSG
Trigger: TCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTG...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAATGATGATGAAGATGTaGGCATCTGTCCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRMMMKM*ASVPAA
Trigger: TGCTGCTGGGACAGATGCCAACATCTTCATCATCAT...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp CCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTTCTGTTCCCTCTTGTaGGTACACAGATACTTCTGC +
Preference number: 5 (lower is better)
Translates to: PLGLLKLGKSIHFLASRCFCSLL*VHRYFC
Trigger: GCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAA...GCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATTGTTCCGCTCAAACTaGTTCCAGTTTGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLFRSN*FQFADC
Trigger: GCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGTTGAATGTGTCCGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: LATGFIETGEKYTLLSKQLNVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACGGACACATTCAA...CTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTTAAAGAAGTACACATaGCCGTACTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASLKKYT*PYSISV
Trigger: CACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATCTCGAATGGTCTTTTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRSRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAAAAGACCATTCGAGA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGAAACCTGGCTTTCTTTTaGTCCAGCTGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRNLAFF*SSCISS
Trigger: AGAGGAGATGCAGCTGGACAAAAAGAAAGCCAGGTT...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGAGTAACCTCGAATACCTaGAAGTACTTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRVTSNT*KYFLFL
Trigger: GAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTAC...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp CACTTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCTTCCATGATGTTCACTaGAGATTGGGGTTTTGCCAT +
Preference number: 5 (lower is better)
Translates to: HLPLGLLKLGKSIHFLASFHDVH*RLGFCH
Trigger: ATGGCAAAACCCCAATCTCAAGTGAACATCATGGAA...GCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398705.7
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATGCTTCTGTTCCCTCTaGTTGGTACACAGATACTTC +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRCFCSL*LVHRYF
Trigger: GAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000579038.6
CDS-3UTR CAA 90 bp GGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATGCTAAGATTAAAGAAGTACACATaGCCGTACTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GFIETGEKYTLLSKQMLRLKKYT*PYSISV
Trigger: CACCGAGATGGAGTACGGCAATGTGTACTTCTTTAA...TCTTAGCATCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATTAAAATACACCATCTaGATGGCCTCTGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRLKYTI*MASASP
Trigger: TGGAGAAGCAGAGGCCATCAAGATGGTGTATTTTAA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS-3UTR CAA 90 bp TTGCCACTGGGTTTATTGAAACTGGGGAAAAGTATACACTTCTTAGCAAGCAGATTGCCACTGGGTTTATaGAAACTGGGGAAAAGTATA +
Preference number: 5 (lower is better)
Translates to: LPLGLLKLGKSIHFLASRLPLGL*KLGKSI
Trigger: TATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA...TCTGCTTGCTAAGAAGTGTATACTTTTCCCCAGTTTCAATAAACCCAGTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000398705.7
ENST00000579038.6
CDS CCA 72 bp CCAGGTGCCGCAGCCACACGGTGTCCACGAACCAGCTaGGCCCAAAGCCCTCGCCCGTGTGCCCGAGCCGGA +
Preference number: 6 (lower is better)
Translates to: PGAAATRCPRTS*AQSPRPCARAG
Trigger: TCCGGCTCGGGCACACGGGCGAGGGCTTTGGGCCCAGCTGGTTCGTGGACACCGTGTGGCTGCGGCACCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp GGCTCACTGTGCCGCCTCCTCACACCTGCGGGAACCTaGGACCTCCTCCCTGAGCTCTGGCGCCCACGGCCC +
Preference number: 6 (lower is better)
Translates to: GSLCRLLTPAGT*DLLPELWRPRP
Trigger: GGGCCGTGGGCGCCAGAGCTCAGGGAGGAGGTCTCAGGTTCCCGCAGGTGTGAGGAGGCGGCACAGTGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS GCA 72 bp TCCTCCGGCGTGAGGTCCACCTCCCGCACCACCAGGTaGCGCAGCCACACGGTGTCCACGAACCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SSGVRSTSRTTR*RSHTVSTNQLG
Trigger: GCCCAGCTGGTTCGTGGACACCGTGTGGCTGCGGCACCTGGTGGTGCGGGAGGTGGACCTCACGCCGGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 72 bp CCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTGTGCTaGTCAATCACCTCCTGCATCCCCGGCCCAAACTCC +
Preference number: 6 (lower is better)
Translates to: PRASQRWASNLC*SITSCIPGPNS
Trigger: GGAGTTTGGGCCGGGGATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp AGCTCTGGCGCCCACGGCCCTCCTATAGCTCAGGCCTaGGTGGGCCAGAGTGCCCCGTTTTCTTGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SSGAHGPPIAQA*VGQSAPFSWLP
Trigger: GGGAAGCCAAGAAAACGGGGCACTCTGGCCCACCCAGGCCTGAGCTATAGGAGGGCCGTGGGCGCCAGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642948.1
CDS GCA 72 bp TTGCCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTGTaGTGCTCAATCACCTCCTGCATCCCCGGCCCAAAC +
Preference number: 6 (lower is better)
Translates to: LPRASQRWASNL*CSITSCIPGPN
Trigger: GTTTGGGCCGGGGATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp GGCGCCCGTCAGCCTGGTTCTTGTCCAGCCAGCGGTTaGCGGGAAAGGTGTACTGCTTGCCTTGACGGGGCA +
Preference number: 6 (lower is better)
Translates to: GARQPGSCPASG*RERCTACLDGA
Trigger: TGCCCCGTCAAGGCAAGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACAAGAACCAGGCTGACGGGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp TCGTTGTCCTCCTTGCCCCGGGCCAGCCAGCGGTGGGCTTCGAACTaGTGCTGCTCAATCACCTCCTGCATCCCCGGCCCAAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLSSLPRASQRWASN*CCSITSCIPGPNSS
Trigger: GGAGGAGTTTGGGCCGGGGATGCAGGAGGTGATTGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp TCAGGACCCGGCTTGCCAGCTGGCACCAACTCCACGACAAGTTCGTaGTCCTCCTTGCCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTG +
Preference number: 6 (lower is better)
Translates to: SGPGLPAGTNSTTSS*SSLPRASQRWASNL
Trigger: CAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGAGTTGGTGCCAGCTGGCAAGCCGGGTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp CGACTCAGGGGGCTAAGGAGGACAGCCAGCTCGATGTaGAAGATGTCCGTGCGGCCTCGGTCAAACACGCCG +
Preference number: 6 (lower is better)
Translates to: RLRGLRRTASSM*KMSVRPRSNTP
Trigger: CGGCGTGTTTGACCGAGGCCGCACGGACATCTTCCACATCGAGCTGGCTGTCCTCCTTAGCCCCCTGAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp GCTGGCACCAACTCCACGACAAGTTCGTTGTCCTCCTaGCCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTG +
Preference number: 6 (lower is better)
Translates to: AGTNSTTSSLSS*PRASQRWASNL
Trigger: CAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGAGTTGGTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp GGCTTGCCAGCTGGCACCAACTCCACGACAAGTTCGTTGTCCTCCTaGCCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTGTGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: GLPAGTNSTTSSLSS*PRASQRWASNLCCS
Trigger: TGAGCAGCACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGAGTTGGTGCCAGCTGGCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp GTTCTTGTCCAGCCAGCGGTTGGCGGGAAAGGTGTACTGCTTGCCTaGACGGGGCACACGGATCTGAACGCTGCCCAGGAACCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: VLVQPAVGGKGVLLA*TGHTDLNAAQEPAG
Trigger: GCCAGCTGGTTCCTGGGCAGCGTTCAGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp AGCCTGCGACGTAGAACTCCTCCACAGAGCCACGGCTaGAGCCCCTCTTCCCTCGGGGGTAGTCCAACCAGA +
Preference number: 6 (lower is better)
Translates to: SLRRRTPPQSHG*SPSSLGGSPTR
Trigger: TCTGGTTGGACTACCCCCGAGGGAAGAGGGGCTTCAGCCGTGGCTCTGTGGAGGAGTTCTACGTCGCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp CCACCATGGCATCCAAGAGGTCGAAGACACGGGAGGTaGTGCCGTCGCCTCTGTCCTTGGCCAGCCAGCAGT +
Preference number: 6 (lower is better)
Translates to: PPWHPRGRRHGR*CRRLCPWPASS
Trigger: ACTGCTGGCTGGCCAAGGACAGAGGCGACGGCATCACCTCCCGTGTCTTCGACCTCTTGGATGCCATGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS GCA 72 bp TGGAGCTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTaGTGCAGTTGCTGCTGCGGTCCCCAGTGTACTCCT +
Preference number: 6 (lower is better)
Translates to: WSSGRSPRSQQG*CSCCCGPQCTP
Trigger: AGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp TGTCCAGCCAGCGGTTGGCGGGAAAGGTGTACTGCTTaGCTTGACGGGGCACACGGATCTGAACGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: CPASGWRERCTA*LDGAHGSERCP
Trigger: TGGGCAGCGTTCAGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTCCCGCCAACCGCTGGCTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 72 bp CTGGCACCAACTCCACGACAAGTTCGTTGTCCTCCTTaGCCCGGGCCAGCCAGCGGTGGGCTTCGAACTTGT +
Preference number: 6 (lower is better)
Translates to: LAPTPRQVRCPP*PGPASGGLRTC
Trigger: ACAAGTTCGAAGCCCACCGCTGGCTGGCCCGGGGCAAGGAGGACAACGAACTTGTCGTGGAGTTGGTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp CTCAACGCCATTCTCTGTTTGTTCCTGTGGGTCAGCTaGCCCATGGGCTCTAGGTGCTGGGGCCCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: LNAILCLFLWVS*PMGSRCWGPAC
Trigger: GCAGGCAGGGCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAGAATGGCGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000419859.1
ENST00000582408.6
CDS CAA 72 bp CAGCCAGCGGTTGGCGGGAAAGGTGTACTGCTTGCCTaGACGGGGCACACGGATCTGAACGCTGCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: QPAVGGKGVLLA*TGHTDLNAAQE
Trigger: TTCCTGGGCAGCGTTCAGATCCGTGTGCCCCGTCAAGGCAAGCAGTACACCTTTCCCGCCAACCGCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp TCTCTCACCAGCACTCTGTCCAGGTACCAGCCGCTGCCGGAGCCTTaGCCATCGTGTCTGATCCTCACCCGCCTCACATTCCGCATGGTG +
Preference number: 6 (lower is better)
Translates to: SLTSTLSRYQPLPEP*PSCLILTRLTFRMV
Trigger: CACCATGCGGAATGTGAGGCGGGTGAGGATCAGACACGATGGCAAAGGCTCCGGCAGCGGCTGGTACCTGGACAGAGTGCTGGTGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 72 bp TCTGTGCTGCCCCGCTCGAAGAGGTTGCGCATTTTCTaGTTCAGCTCCCGCTTGCCTGTGTCTCCGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SVLPRSKRLRIF*FSSRLPVSPLA
Trigger: GGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp AGCACTCTGTCCAGGTACCAGCCGCTGCCGGAGCCTTaGCCATCGTGTCTGATCCTCACCCGCCTCACATTC +
Preference number: 6 (lower is better)
Translates to: STLSRYQPLPEP*PSCLILTRLTF
Trigger: GAATGTGAGGCGGGTGAGGATCAGACACGATGGCAAAGGCTCCGGCAGCGGCTGGTACCTGGACAGAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp AGCGTCTCCAGGAAGAAGCGGTCTGTGCTGCCCCGCTCGAAGAGGTaGCGCATTTTCTGCTTCAGCTCCCGCTTGCCTGTGTCTCCGTTG +
Preference number: 6 (lower is better)
Translates to: SVSRKKRSVLPRSKR*RIFCFSSRLPVSPL
Trigger: CAACGGAGACACAGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp CCCTACCAAGTGCCTCAGCATCTGCCACTCAACGCCATTCTCTGTTaGTTCCTGTGGGTCAGCTGGCCCATGGGCTCTAGGTGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: PYQVPQHLPLNAILC*FLWVSWPMGSRCWG
Trigger: GCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGGTAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS TCA 72 bp CCGTCTTTATCCGGGAGGAGCCTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGATTCATGCCCGTGTTA +
Preference number: 6 (lower is better)
Translates to: PSLSGRSLRMST*EQCHPGFMPVL
Trigger: TAACACGGGCATGAATCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATAAAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp CTTGAACGTAGTCAGCCATGGGCCCGGTCACTGTGCTaGTGTCGACATCGGCCATCTTGGAGCTCAGGGCGA +
Preference number: 6 (lower is better)
Translates to: LERSQPWARSLC*CRHRPSWSSGR
Trigger: TCGCCCTGAGCTCCAAGATGGCCGATGTCGACATCAGCACAGTGACCGGGCCCATGGCTGACTACGTTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp TTGTTCCTGTGGGTCAGCTGGCCCATGGGCTCTAGGTaGTGGGGCCCTGCCTGCAATTCTCTCATAACCCCT +
Preference number: 6 (lower is better)
Translates to: LFLWVSWPMGSR*WGPACNSLITP
Trigger: AGGGGTTATGAGAGAATTGCAGGCAGGGCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000419859.1
ENST00000582408.6
CDS GCA 72 bp CGTTTTTGGCCAGCCAGCGGCCACAGGGAAACGTCATaGACTTCCCAAGAGATGGGGCATCCACCTCTACCC +
Preference number: 6 (lower is better)
Translates to: RFWPASGHRETS*TSQEMGHPPLP
Trigger: GGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTGGCCGCTGGCTGGCCAAAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp TCAAGGTCTCTGCACCGTCTTTATCCGGGAGGAGCCTaGGGATGTCCACGTGAGAGCAGTGCCACCCAGGAT +
Preference number: 6 (lower is better)
Translates to: SRSLHRLYPGGA*GCPRESSATQD
Trigger: ATCCTGGGTGGCACTGCTCTCACGTGGACATCCGCAGGCTCCTCCCGGATAAAGACGGTGCAGAGACCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp GGAAGAAGCGGTCTGTGCTGCCCCGCTCGAAGAGGTTaGGCATTTTCTGCTTCAGCTCCCGCTTGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: GRSGLCCPARRG*AFSASAPACLC
Trigger: ACACAGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp CCAGCTCCAGCGTCTCCAGGAAGAAGCGGTCTGTGCTaGCCCGCTCGAAGAGGTTGCGCATTTTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: PAPASPGRSGLC*PARRGCAFSAS
Trigger: TGAAGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGCTGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp CTACCAGCTCCAGCGTCTCCAGGAAGAAGCGGTCTGTaGTGCCCCGCTCGAAGAGGTTGCGCATTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: LPAPASPGRSGL*CPARRGCAFSA
Trigger: AGCAGAAAATGCGCAACCTCTTCGAGCGGGGCAGCACAGACCGCTTCTTCCTGGAGACGCTGGAGCTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS CCA 72 bp GTTGTTGTCACCGCCTCCCCTACCCTCCTCGCTCTGTaGCAGCACATAGGACTCATCCACTGGCAACAGCTC +
Preference number: 6 (lower is better)
Translates to: VVVTASPTLLAL*QHIGLIHWQQL
Trigger: GAGCTGTTGCCAGTGGATGAGTCCTATGTGCTGCCACAGAGCGAGGAGGGTAGGGGAGGCGGTGACAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 72 bp CATAGTGGACCAATTTCTGGATCTCCACCACCTCGCTaGGATACAGCTCCACCTCCAGGCGCCCGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: HSGPISGSPPPR*DTAPPPGARQP
Trigger: AGGCTGACGGGCGCCTGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGATCCAGAAATTGGTCCACTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp TTATCTTTCTGCTCCAGGGCCAGGTTGTCGAGGGGGTaGTTGTCACCGCCTCCCCTACCCTCCTCGCTCTGT +
Preference number: 6 (lower is better)
Translates to: LSFCSRARLSRG*LSPPPLPSSLC
Trigger: ACAGAGCGAGGAGGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAACCTGGCCCTGGAGCAGAAAGATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp TCCCCCAAGACACCATCTTGCGGCGAGGACTTCCTCTaGAACCCCCGCATCCCTACCAAGTGCCTCAGCATC +
Preference number: 6 (lower is better)
Translates to: SPKTPSCGEDFL*NPRIPTKCLSI
Trigger: GATGCTGAGGCACTTGGTAGGGATGCGGGGGTTCAAGAGGAAGTCCTCGCCGCAAGATGGTGTCTTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS CAA 90 bp AGGAACCAAGTGCCTCAGCATCTGCCACTCAACGCCATTCTCTGTTaGTTCCTGTGGGTCAGCTGGCCCATGGGCTCTAGGTGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RNQVPQHLPLNAILC*FLWVSWPMGSRCWG
Trigger: GCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS CAA 90 bp GTCTGTCAAGTGCCTCAGCATCTGCCACTCAACGCCATTCTCTGTTaGTTCCTGTGGGTCAGCTGGCCCATGGGCTCTAGGTGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: VCQVPQHLPLNAILC*FLWVSWPMGSRCWG
Trigger: GCCCCAGCACCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS CAA 90 bp TTCAGGGAGAGCCAGCGCCCGCATAGGAACAGGAACTCGTCCTCGTaGGTGTCATTCCAGATCTCCACCTTCTCCACGTACCAGTCTGCG +
Preference number: 6 (lower is better)
Translates to: FRESQRPHRNRNSSS*VSFQISTFSTYQSA
Trigger: CGCAGACTGGTACGTGGAGAAGGTGGAGATCTGGAATGACACCAACGAGGACGAGTTCCTGTTCCTATGCGGGCGCTGGCTCTCCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp TCCAAGAGGTCGAAGACACGGGAGGTGATGCCGTCGCCTCTGTCCTaGGCCAGCCAGCAGTTACAGTTCAACATGTACTTGGTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SKRSKTREVMPSPLS*ASQQLQFNMYLVPW
Trigger: CCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCTGGCCAAGGACAGAGGCGACGGCATCACCTCCCGTGTCTTCGACCTCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS TCA 72 bp AGCCGTTCCTCTCTCGAACTTGTTGGTCCGGTTCTCTaGCTTGCCAAGGTATCGCTCCCCAGTGTCCCCGAG +
Preference number: 6 (lower is better)
Translates to: SRSSLELVGPVL*LAKVSLPSVPE
Trigger: CTCGGGGACACTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp ATCTTGTTGTTGGCACAGGCAAAGTCGCGGACCGTCTaGCCGTCACCCTCACTCTTGGAGAGCCAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: ILLLAQAKSRTV*PSPSLLESQQS
Trigger: TGACTGCTGGCTCTCCAAGAGTGAGGGTGACGGGCAGACGGTCCGCGACTTTGCCTGTGCCAACAACAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp CAGCTCCCTGGACAGCTGGCCATCATCTTCCTCCACTaGCAGCCAACGTTGGCATGGAAAGTAGTACCCTCG +
Preference number: 6 (lower is better)
Translates to: QLPGQLAIIFLH*QPTLAWKVVPS
Trigger: CGAGGGTACTACTTTCCATGCCAACGTTGGCTGGCAGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579038.6
CDS CCA 72 bp GCGGCCACAGGGAAACGTCATGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCAGTCTACAAACCAGCC +
Preference number: 6 (lower is better)
Translates to: AATGKRHALPKR*GIHLYPVYKPA
Trigger: GGCTGGTTTGTAGACTGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGCATGACGTTTCCCTGTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp GTGCCTCAGCATCTGCCACTCAACGCCATTCTCTGTTaGTTCCTGTGGGTCAGCTGGCCCATGGGCTCTAGG +
Preference number: 6 (lower is better)
Translates to: VPQHLPLNAILC*FLWVSWPMGSR
Trigger: CCTAGAGCCCATGGGCCAGCTGACCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300591.11
ENST00000419859.1
ENST00000582408.6
CDS CAA 72 bp ATTCTGTCCAGGAACCAGCCTGCTCTGTTGCCTGTGTaGTCGTGGCGAATCCGAATCTTGGTCAGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: ILSRNQPALLPV*SWRIRILVRAP
Trigger: GGGGGCCCTGACCAAGATTCGGATTCGCCACGACAACACAGGCAACAGAGCAGGCTGGTTCCTGGACAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000419859.1
ENST00000441551.6
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp GAAACTCTTTGGATCGGTTCTTCCTGCCCTCCAGGATaGGCCAGACGTTCTCCCTGGTTTCGCCTCCGTTGC +
Preference number: 6 (lower is better)
Translates to: ETLWIGSSCPPG*ARRSPWFRLRC
Trigger: GCAACGGAGGCGAAACCAGGGAGAACGTCTGGCTCATCCTGGAGGGCAGGAAGAACCGATCCAAAGAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp CCGTGCTGGCCCCAGAGACATCCCCAGTCTTCAAGCTaGTGTGATAGCGAAAGTTCTTCAGTGTCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PCWPQRHPQSSS*CDSESSSVSRC
Trigger: GCAGCGCGACACTGAAGAACTTTCGCTATCACATCAGCTTGAAGACTGGGGATGTCTCTGGGGCCAGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp CTTCATACTTATTACCTCTGGGCATGTCCATGGGGTTaGAGCTGGCCAGCAGGTCACGGCACCACTGGCGGT +
Preference number: 6 (lower is better)
Translates to: LHTYYLWACPWG*SWPAGHGTTGG
Trigger: ACCGCCAGTGGTGCCGTGACCTGCTGGCCAGCTTCAACCCCATGGACATGCCCAGAGGTAATAAGTATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp TCTTGGTCAGGGCCCCCAGGTCAATGGCATAGATGGTaGAGGTGTCTGTCTGGAATGTGTCCTTGGACGCCC +
Preference number: 6 (lower is better)
Translates to: SWSGPPGQWHRW*RCLSGMCPWTP
Trigger: GGGCGTCCAAGGACACATTCCAGACAGACACCTTCACCATCTATGCCATTGACCTGGGGGCCCTGACCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441551.6
CDS GCA 72 bp TTCCTCTCTCGAACTTGTTGGTCCGGTTCTCTGACTTaGCAAGGTATCGCTCCCCAGTGTCCCCGAGGTCTC +
Preference number: 6 (lower is better)
Translates to: FLSRTCWSGSLT*QGIAPQCPRGL
Trigger: GAGACCTCGGGGACACTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp CGATCTCCCAGAAGTCAGCAGGGCTGCTGCAGTTGCTaGTGCGGTCCCCAGTGTACTCCTTCTCGTAAAAGA +
Preference number: 6 (lower is better)
Translates to: RSPRSQQGCCSC*CGPQCTPSRKR
Trigger: TCTTTTACGAGAAGGAGTACACTGGGGACCGCAGCAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp CGAAGAGGTTGCGCATTTTCTGCTTCAGCTCCCGCTTaGCTGTGTCTCCGTTGGCCCCAAAGATGGTCACGA +
Preference number: 6 (lower is better)
Translates to: RRGCAFSASAPA*LCLRWPQRWSR
Trigger: TCGTGACCATCTTTGGGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCTCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp GCGCTGCTGTCACTGGGTAGCAACTCTCGGACCAGCTaGCCATCATCCTTATCCTTGTCCAACCACCTGAGA +
Preference number: 6 (lower is better)
Translates to: ALLSLGSNSRTS*PSSLSLSNHLR
Trigger: TCTCAGGTGGTTGGACAAGGATAAGGATGATGGGCAGCTGGTCCGAGAGTTGCTACCCAGTGACAGCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 72 bp CCTGAACCTCATAGGTGTTTCGCTCAGGACCCGGCTTaGCAGCTGGCACCAACTCCACGACAAGTTCGTTGT +
Preference number: 6 (lower is better)
Translates to: PEPHRCFAQDPA*QLAPTPRQVRC
Trigger: ACAACGAACTTGTCGTGGAGTTGGTGCCAGCTGGCAAGCCGGGTCCTGAGCGAAACACCTATGAGGTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp AGGTGGTCTCTTCCAGCTCATCACAGATCTTGTTGTTaGCACAGGCAAAGTCGCGGACCGTCTGCCCGTCAC +
Preference number: 6 (lower is better)
Translates to: RWSLPAHHRSCC*HRQSRGPSARH
Trigger: GTGACGGGCAGACGGTCCGCGACTTTGCCTGTGCCAACAACAAGATCTGTGATGAGCTGGAAGAGACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 72 bp CCAGCACCTTCAAGTTCACCTGTGCACACAGTCACATaGTACCGGGCCATGCCCATGATCCTGCGCACTGTT +
Preference number: 6 (lower is better)
Translates to: PAPSSSPVHTVT*YRAMPMILRTV
Trigger: AACAGTGCGCAGGATCATGGGCATGGCCCGGTACCATGTGACTGTGTGCACAGGTGAACTTGAAGGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp GTTCCTCTCTCGAACTTGTTGGTCCGGTTCTCTGACTaGCCAAGGTATCGCTCCCCAGTGTCCCCGAGGTCT +
Preference number: 6 (lower is better)
Translates to: VPLSNLLVRFSD*PRYRSPVSPRS
Trigger: AGACCTCGGGGACACTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp TCGAAGAGGTTGCGCATTTTCTGCTTCAGCTCCCGCTaGCCTGTGTCTCCGTTGGCCCCAAAGATGGTCACG +
Preference number: 6 (lower is better)
Translates to: SKRLRIFCFSSR*PVSPLAPKMVT
Trigger: CGTGACCATCTTTGGGGCCAACGGAGACACAGGCAAGCGGGAGCTGAAGCAGAAAATGCGCAACCTCTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp TCTGCATGGAAGAGGTCTCTGATGATGGACCCGTCGTCTTCGTTTTaGGCCAGCCAGCGGCCACAGGGAAACGTCATGCACTTCCCAAGA +
Preference number: 6 (lower is better)
Translates to: SAWKRSLMMDPSSSF*ASQRPQGNVMHFPR
Trigger: TCTTGGGAAGTGCATGACGTTTCCCTGTGGCCGCTGGCTGGCCAAAAACGAAGACGACGGGTCCATCATCAGAGACCTCTTCCATGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp AACCACTCCGGCCGACTGCCCAGGCCATCAATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCTAGGATCTCCATGATGAAGGTGTCG +
Preference number: 6 (lower is better)
Translates to: NHSGRLPRPSIRIRI*VNGAMSRISMMKVS
Trigger: CGACACCTTCATCATGGAGATCCTAGACATTGCTCCATTCACCAAGATGCGGATCCGGATTGATGGCCTGGGCAGTCGGCCGGAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp ATCTCGGTGATGGTGATGGTCTTGACATGCCAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCCCTGGCAAGGTGGCCCACACAGAGG +
Preference number: 6 (lower is better)
Translates to: ISVMVMVLTCQASSL*GINRSSLARWPTQR
Trigger: CCTCTGTGTGGGCCACCTTGCCAGGGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTGGCATGTCAAGACCATCACCATCACCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp TCTTGGTCAGGGCCCCCAGGTCAATGGCATAGATGGTaGAGGTGTCTGTCTGCTATGAGCTGGTGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: SWSGPPGQWHRW*RCLSAMSWCCA
Trigger: TGCACAGCACCAGCTCATAGCAGACAGACACCTTCACCATCTATGCCATTGACCTGGGGGCCCTGACCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000419859.1
CDS TCA 72 bp CGTTCTCCCTGGTTTCGCCTCCGTTGCCCGTTTCTATaGCGATCTCGTAGGTGGTCTCTTCCAGCTCATCAC +
Preference number: 6 (lower is better)
Translates to: RSPWFRLRCPFL*RSRRWSLPAHH
Trigger: GTGATGAGCTGGAAGAGACCACCTACGAGATCGTCATAGAAACGGGCAACGGAGGCGAAACCAGGGAGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp TCTTGGTCAGGGCCCCCAGGTCAATGGCATAGATGGTaGAGGTGTCTGTCAAGTGCCTCAGCATCTGCCACT +
Preference number: 6 (lower is better)
Translates to: SWSGPPGQWHRW*RCLSSASASAT
Trigger: AGTGGCAGATGCTGAGGCACTTGACAGACACCTTCACCATCTATGCCATTGACCTGGGGGCCCTGACCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582408.6
CDS GCA 72 bp AGGGCCATATGGATCACACCATGTGAATGCACACACTaGTCCATGCACGGGAGGAAGCAGACCACACCAGGA +
Preference number: 6 (lower is better)
Translates to: RAIWITPCECTH*SMHGRKQTTPG
Trigger: TCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATATGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000419859.1
CDS GCA 72 bp GGTGTGAAGAGGGCCATATGGATCACACCATGTGAATaGACACACTGCTCCATGCACGGGAGGAAGCAGACC +
Preference number: 6 (lower is better)
Translates to: GVKRAIWITPCE*THCSMHGRKQT
Trigger: GGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATATGGCCCTCTTCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300591.11
ENST00000419859.1
CDS GCA 72 bp CAGCTCCCTGGACAGCTGGCCATCATCTTCCTCCACTaGCAGCCAACGTTGGCATGGAAAGTAGTACGTGAT +
Preference number: 6 (lower is better)
Translates to: QLPGQLAIIFLH*QPTLAWKVVRD
Trigger: ATCACGTACTACTTTCCATGCCAACGTTGGCTGGCAGTGGAGGAAGATGATGGCCAGCTGTCCAGGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp GTGTTGTTCCGCTCAAACTTGTTCCAGTTTGCCGACTaGTTCAGGGCCAGTGTCCCACTATCCCCGTTCTCC +
Preference number: 6 (lower is better)
Translates to: VLFRSNLFQFAD*FRASVPLSPFS
Trigger: GGAGAACGGGGATAGTGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp TGTGTCCGTGTTGTTCCGCTCAAACTTGTTCCAGTTTaGCGACTGCTTCAGGGCCAGTGTCCCACTATCCCC +
Preference number: 6 (lower is better)
Translates to: CVRVVPLKLVPV*RLLQGQCPTIP
Trigger: GGGGATAGTGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAACACGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp TTGAACCCCCGCATCCCTACCAAGTGCCTCAGCATCTaGCACTCAACGCCATTCTCTGTTTGTTCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: LNPRIPTKCLSI*HSTPFSVCSCG
Trigger: CCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGGTAGGGATGCGGGGGTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS GCA 72 bp GAGGACTTCCTCTTGAACCCCCGCATCCCTACCAAGTaGCTCAGCATCTGCCACTCAACGCCATTCTCTGTT +
Preference number: 6 (lower is better)
Translates to: EDFLLNPRIPTK*LSICHSTPFSV
Trigger: AACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGGTAGGGATGCGGGGGTTCAAGAGGAAGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS GCA 72 bp TATGGATCACACCATGTGAATGCACACACTGCTCCATaGACGGGAGGAAGCAGACCACACCAGGAACCTGCC +
Preference number: 6 (lower is better)
Translates to: YGSHHVNAHTAP*TGGSRPHQEPA
Trigger: GGCAGGTTCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419859.1
CDS CCA 72 bp GTCACGATGACTTCGTACTTGACGGGCACCAGGCTCTaGACCTTGCTGGCAAAGCTCTCTGTCGTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: VTMTSYLTGTRL*TLLAKLSVVLV
Trigger: TACCAAGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 72 bp GATAGCGAAAGTTCTTCAGTGTCGCGCTGCTGTCACTaGGTAGCAACTCTCGGACCAGCTGCCCATCATCCT +
Preference number: 6 (lower is better)
Translates to: DSESSSVSRCCH*VATLGPAAHHP
Trigger: AGGATGATGGGCAGCTGGTCCGAGAGTTGCTACCCAGTGACAGCAGCGCGACACTGAAGAACTTTCGCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp AATGTGGTAGATTTATCTTTCTGCTCCAGGGCCAGGTaGTCGAGGGGGTTGTTGTCACCGCCTCCCCTACCC +
Preference number: 6 (lower is better)
Translates to: NVVDLSFCSRAR*SRGLLSPPPLP
Trigger: GGGTAGGGGAGGCGGTGACAACAACCCCCTCGACAACCTGGCCCTGGAGCAGAAAGATAAATCTACCACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp GGCCGACTGCCCAGGCCATCAATCCGGATCCGCATCTaGGTGAATGGAGCAATGTCTAGGATCTCCATGATG +
Preference number: 6 (lower is better)
Translates to: GRLPRPSIRIRI*VNGAMSRISMM
Trigger: CATCATGGAGATCCTAGACATTGCTCCATTCACCAAGATGCGGATCCGGATTGATGGCCTGGGCAGTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp ATGGTGATGGTCTTGACATGCCAGGCAAGTTCTCTCTaGGGGATAAACCGGTCTTCCCTGGCAAGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: MVMVLTCQASSL*GINRSSLARWP
Trigger: GGGCCACCTTGCCAGGGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTGGCATGTCAAGACCATCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp ATGACTTCGTACTTGACGGGCACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTCGTCTTGGTAACCTCG +
Preference number: 6 (lower is better)
Translates to: MTSYLTGTRLWT*LAKLSVVLVTS
Trigger: CGAGGTTACCAAGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGTCAAGTACGAAGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp GTAATGTCTATTCTGTCCAGGAACCAGCCTGCTCTGTTGCCTGTGTaGTCGTGGCGAATCCGAATCTTGGTCAGGGCCCCCAGGTCAATG +
Preference number: 6 (lower is better)
Translates to: VMSILSRNQPALLPV*SWRIRILVRAPRSM
Trigger: CATTGACCTGGGGGCCCTGACCAAGATTCGGATTCGCCACGACAACACAGGCAACAGAGCAGGCTGGTTCCTGGACAGAATAGACATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000419859.1
ENST00000441551.6
ENST00000536736.5
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp CGGGAGGCAGACTTCCTCTCAAAGAACTGCTTCTGTTCCCTCTTGTaGGTACACAGATACTTCTGCTGGGTGCACACGGCATCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: READFLSKNCFCSLL*VHRYFCWVHTASQP
Trigger: TGGCTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCAGTTCTTTGAGAGGAAGTCTGCCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp ATAGCTGTGGTCTCAGCTCCGCCCACTAAGATATCCCTTTGGATTTaGCCATCGTCTTCGTCCAAGGCCAGCCAGCGGTTAAGGGGGAAG +
Preference number: 6 (lower is better)
Translates to: IAVVSAPPTKISLWI*PSSSSKASQRLRGK
Trigger: CTTCCCCCTTAACCGCTGGCTGGCCTTGGACGAAGACGATGGCAAAATCCAAAGGGATATCTTAGTGGGCGGAGCTGAGACCACAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp GTCAGTGGCCGCGTCCTTGTGCTTCCCAGTGGTGACTaGCACATAGTAGGGAATAATTGGGCCCTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: VSGRVLVLPSGD*HIVGNNWALLN
Trigger: GTTCAAGAGGGCCCAATTATTCCCTACTATGTGTCAGTCACCACTGGGAAGCACAAGGACGCGGCCACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp GCCAGTTGCTACAAGGGAAGGTCTGCTGGATACCAGTaGAGGGGCACAGAATCACCACCTTCTCACAGAACC +
Preference number: 6 (lower is better)
Translates to: ASCYKGRSAGYQ*RGTESPPSHRT
Trigger: GGTTCTGTGAGAAGGTGGTGATTCTGTGCCCCTTCACTGGTATCCAGCAGACCTTCCCTTGTAGCAACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS GCA 72 bp AAGCAGACCACACCAGGAACCAAGTGCCTCAGCATCTaGCACTCAACGCCATTCTCTGTTTGTTCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: KQTTPGTKCLSI*HSTPFSVCSCG
Trigger: CCCACAGGAACAAACAGAGAATGGCGTTGAGTGGCAGATGCTGAGGCACTTGGTTCCTGGTGTGGTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS GCA 72 bp TGGCCAGCCAGCAGTTACAGTTCAACATGTACTTGGTaGCCTGGGTGGGCACTGCCAAACACAACTCTTCCA +
Preference number: 6 (lower is better)
Translates to: WPASSYSSTCTW*PGWALPNTTLP
Trigger: TGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS GCA 72 bp ATCAGTGCCTGCTCCCAGGATGTCGCTGGTCTTAACTaGGACGGTGTAGGAGGTCCACTCCATCATTTCTTC +
Preference number: 6 (lower is better)
Translates to: ISACSQDVAGLN*DGVGGPLHHFF
Trigger: GAAGAAATGATGGAGTGGACCTCCTACACCGTCGCAGTTAAGACCAGCGACATCCTGGGAGCAGGCACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp GGCCATGCCCATGATCCTGCGCACTGTTGGGCCTTCTaGAGTCATTTCCCTCACTATCTCATTGTCATCCTC +
Preference number: 6 (lower is better)
Translates to: GHAHDPAHCWAF*SHFPHYLIVIL
Trigger: GAGGATGACAATGAGATAGTGAGGGAAATGACTGCAGAAGGCCCAACAGTGCGCAGGATCATGGGCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp TTTGTCATCCTCAGAGGTGGCAAGCCACCGATCGCATaGGAAAGTCAAGGTCTCTGCACCGTCTTTATCCGG +
Preference number: 6 (lower is better)
Translates to: FVILRGGKPPIA*ESQGLCTVFIR
Trigger: CCGGATAAAGACGGTGCAGAGACCTTGACTTTCCCATGCGATCGGTGGCTTGCCACCTCTGAGGATGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 72 bp AGCAGTTACAGTTCAACATGTACTTGGTGCCCTGGGTaGGCACTGCCAAACACAACTCTTCCACCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SSYSSTCTWCPG*ALPNTTLPPAS
Trigger: GCTGGCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS CCA 72 bp AGCCAGCAGTTACAGTTCAACATGTACTTGGTGCCCTaGGTGGGCACTGCCAAACACAACTCTTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: SQQLQFNMYLVP*VGTAKHNSSTS
Trigger: GCTGGTGGAAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS CCA 72 bp CCTTGGCCAGCCAGCAGTTACAGTTCAACATGTACTTaGTGCCCTGGGTGGGCACTGCCAAACACAACTCTT +
Preference number: 6 (lower is better)
Translates to: PWPASSYSSTCT*CPGWALPNTTL
Trigger: AAGAGTTGTGTTTGGCAGTGCCCACCCAGGGCACCAAGTACATGTTGAACTGTAACTGCTGGCTGGCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS CCA 72 bp ATGGTACCGGGCCATGCCCATGATCCTGCGCACTGTTaGGCCTTCTGCAGTCATTTCCCTCACTATCTCATT +
Preference number: 6 (lower is better)
Translates to: MVPGHAHDPAHC*AFCSHFPHYLI
Trigger: AATGAGATAGTGAGGGAAATGACTGCAGAAGGCCCAACAGTGCGCAGGATCATGGGCATGGCCCGGTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp TGTCCCCCACATCACCAAAAAGGCAGAGATAGACGTTaGCATCGGTCCCAGCACCTTCAAGTTCACCTGTGC +
Preference number: 6 (lower is better)
Translates to: CPPHHQKGRDRR*HRSQHLQVHLC
Trigger: GCACAGGTGAACTTGAAGGTGCTGGGACCGATGCCAACGTCTATCTCTGCCTTTTTGGTGATGTGGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp CTTTCTCTCCATAGATCTGCATGTAGACTCGGGCACTaGTGCCTGCGCCACCCACATCTCCTGTCCAAATCT +
Preference number: 6 (lower is better)
Translates to: LSLHRSACRLGH*CLRHPHLLSKS
Trigger: AGATTTGGACAGGAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCTACATGCAGATCTATGGAGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp ATGTGTCCGTGTTGTTCCGCTCAAACTTGTTCCAGTTaGCCGACTGCTTCAGGGCCAGTGTCCCACTATCCC +
Preference number: 6 (lower is better)
Translates to: MCPCCSAQTCSS*PTASGPVSHYP
Trigger: GGGATAGTGGGACACTGGCCCTGAAGCAGTCGGCAAACTGGAACAAGTTTGAGCGGAACAACACGGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp GTCTCAGCTCCGCCCACTAAGATATCCCTTTGGATTTaGCCATCGTCTTCGTCCAAGGCCAGCCAGCGGTTA +
Preference number: 6 (lower is better)
Translates to: VSAPPTKISLWI*PSSSSKASQRL
Trigger: TAACCGCTGGCTGGCCTTGGACGAAGACGATGGCAAAATCCAAAGGGATATCTTAGTGGGCGGAGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp AAGCGGGAGGCAGACTTCCTCTCAAAGAACTGCTTCTGTTCCCTCTaGTTGGTACACAGATACTTCTGCTGGGTGCACACGGCATCGCAG +
Preference number: 6 (lower is better)
Translates to: KREADFLSKNCFCSL*LVHRYFCWVHTASQ
Trigger: CTGCGATGCCGTGTGCACCCAGCAGAAGTATCTGTGTACCAACAAGAGGGAACAGAAGCAGTTCTTTGAGAGGAAGTCTGCCTCCCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp ACGGGCACCAGGCTCTGGACCTTGCTGGCAAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTGAAGTACTTCCTCTTCCTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: TGTRLWTLLAKLSVV*VTSNTLKYFLFLLR
Trigger: CCTCAAGAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp GTTGTCACGATGACTTCGTACTTGACGGGCACCAGGCTCTGGACCTaGCTGGCAAAGCTCTCTGTCGTCTTGGTAACCTCGAATACCTTG +
Preference number: 6 (lower is better)
Translates to: VVTMTSYLTGTRLWT*LAKLSVVLVTSNTL
Trigger: CAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCTGGTGCCCGTCAAGTACGAAGTCATCGTGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp TATGGATCACACCATGTGAATGCACACACTGCTCCATaGACGGGAGGAAGCAGACCACACCAGGAACCAAGT +
Preference number: 6 (lower is better)
Translates to: YGSHHVNAHTAP*TGGSRPHQEPS
Trigger: ACTTGGTTCCTGGTGTGGTCTGCTTCCTCCCGTGCATGGAGCAGTGTGTGCATTCACATGGTGTGATCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300591.11
CDS GCA 72 bp CAGCTCTATTTTCTTGATGATGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCACAGAGCCACGGCTGAA +
Preference number: 6 (lower is better)
Translates to: QLYFLDDAHIQA*DVELLHRATAE
Trigger: TTCAGCCGTGGCTCTGTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGCATCATCAAGAAAATAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300591.11
ENST00000441551.6
ENST00000579038.6
ENST00000642948.1
CDS GCA 72 bp CCGTACTCCATCTCGGTGATGGTGATGGTCTTGACATaGCAGGCAAGTTCTCTCTTGGGGATAAACCGGTCT +
Preference number: 6 (lower is better)
Translates to: PYSISVMVMVLT*QASSLLGINRS
Trigger: AGACCGGTTTATCCCCAAGAGAGAACTTGCCTGGCATGTCAAGACCATCACCATCACCGAGATGGAGTACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp TTCTTCTCATCCAGCCAGTTGCTACAAGGGAAGGTCTaGTGGATACCAGTGAAGGGGCACAGAATCACCACC +
Preference number: 6 (lower is better)
Translates to: FFSSSQLLQGKV*WIPVKGHRITT
Trigger: GGTGGTGATTCTGTGCCCCTTCACTGGTATCCAGCAGACCTTCCCTTGTAGCAACTGGCTGGATGAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp ATGATGAAGGTGTCAGCCGTTCCTCTCTCGAACTTGTaGGTCCGGTTCTCTGACTTGCCAAGGTATCGCTCC +
Preference number: 6 (lower is better)
Translates to: MMKVSAVPLSNL*VRFSDLPRYRS
Trigger: GGAGCGATACCTTGGCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAACGGCTGACACCTTCATCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp TCGATGATGAAGGTGTCAGCCGTTCCTCTCTCGAACTaGTTGGTCCGGTTCTCTGACTTGCCAAGGTATCGC +
Preference number: 6 (lower is better)
Translates to: SMMKVSAVPLSN*LVRFSDLPRYR
Trigger: GCGATACCTTGGCAAGTCAGAGAACCGGACCAACAAGTTCGAGAGAGGAACGGCTGACACCTTCATCATCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp GCCCGCTGCCTAGAAGAATTTTCCATGAGAAACTCTTaGGATCGGTTCTTCCTGCCCTCCAGGATGAGCCAG +
Preference number: 6 (lower is better)
Translates to: ARCLEEFSMRNS*DRFFLPSRMSQ
Trigger: CTGGCTCATCCTGGAGGGCAGGAAGAACCGATCCAAAGAGTTTCTCATGGAAAATTCTTCTAGGCAGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp CTCTTGCCCTCCAGGCTTTTTCAGTTAAGGAGGGTATaGTGTGGACACCATTGGCTGCACCGTGAGACTCAG +
Preference number: 6 (lower is better)
Translates to: LLPSRLFQLRRV*CGHHWLHRETQ
Trigger: CTGAGTCTCACGGTGCAGCCAATGGTGTCCACACAATACCCTCCTTAACTGAAAAAGCCTGGAGGGCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414184.1
ENST00000452425.2
CDS CAA 90 bp TTCCTAAAGGCCCGCTGCCTAGAAGAATTTTCCATGAGAAACTCTTaGGATCGGTTCTTCCTGCCCTCCAGGATGAGCCAGACGTTCTCC +
Preference number: 6 (lower is better)
Translates to: FLKARCLEEFSMRNS*DRFFLPSRMSQTFS
Trigger: GGAGAACGTCTGGCTCATCCTGGAGGGCAGGAAGAACCGATCCAAAGAGTTTCTCATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp ACCTTGCTGGCAAAGCTCTCTGTCGTCTTGGTAACCTCGAATACCTaGAAGTACTTCCTCTTCCTCTTGAGGGGGATGAGGCAGTCACAG +
Preference number: 6 (lower is better)
Translates to: TLLAKLSVVLVTSNT*KYFLFLLRGMRQSQ
Trigger: CTGTGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTTTGCCAGCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp CTGCGCACTGTTGGGCCTTCTGCAGTCATTTCCCTCACTATCTCATaGTCATCCTCATTGGCATCCAGCCAGCGGTTGCAATTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: LRTVGPSAVISLTIS*SSSLASSQRLQLKL
Trigger: CAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAATGAGATAGTGAGGGAAATGACTGCAGAAGGCCCAACAGTGCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp AGCTCAGACCTCTTGCCCTCCAGGCTTTTTCAGTTAAGGAGGGTATaGTGTGGACACCATTGGCTGCACCGTGAGACTCAGAGATTCACA +
Preference number: 6 (lower is better)
Translates to: SSDLLPSRLFQLRRV*CGHHWLHRETQRFT
Trigger: TGTGAATCTCTGAGTCTCACGGTGCAGCCAATGGTGTCCACACAATACCCTCCTTAACTGAAAAAGCCTGGAGGGCAAGAGGTCTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452425.2
CDS TCA 72 bp CTTTCCACAGGTCTCCCAGATCCAGCGTCTCCACCGTaGAGATTTCAATGCTGTCCCTCTCAAACTTATCGC +
Preference number: 6 (lower is better)
Translates to: LSTGLPDPASPP*RFQCCPSQTYR
Trigger: GCGATAAGTTTGAGAGGGACAGCATTGAAATCTTCACGGTGGAGACGCTGGATCTGGGAGACCTGTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp CTGTCCCAGCAGCAAAGACATCACTGGTGTAGAGGGTaGTCTCGTAAGGAACAAATGGTGTGTACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: LSQQQRHHWCRG*SRKEQMVCTAS
Trigger: CGAGGCTGTACACACCATTTGTTCCTTACGAGATCACCCTCTACACCAGTGATGTCTTTGCTGCTGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp AAGGAGGGTATTGTGTGGACACCATTGGCTGCACCGTaGGACTCAGAGATTCACAGTATCCCAGATGCCATC +
Preference number: 6 (lower is better)
Translates to: KEGIVWTPLAAP*DSEIHSIPDAI
Trigger: GATGGCATCTGGGATACTGTGAATCTCTGAGTCTCACGGTGCAGCCAATGGTGTCCACACAATACCCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414184.1
ENST00000452425.2
CDS TCA 72 bp ACAGCTTCTGACCTGGTCCAAGAAGCCCATTGGTTTTaGTTCAGTACCAGAGATAAGGGCTGGGGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: TASDLVQEAHWF*FSTRDKGWGLL
Trigger: CAGAAGGCCCCAGCCCTTATCTCTGGTACTGAATCAAAACCAATGGGCTTCTTGGACCAGGTCAGAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452425.2
CDS GCA 72 bp AACCTCTATTTTCTTGATGATGCCCACATCCAAGCCTaGGACGTAGAACTCCTCCACAGAGCCACGGCTGAA +
Preference number: 6 (lower is better)
Translates to: NLYFLDDAHIQA*DVELLHRATAE
Trigger: TTCAGCCGTGGCTCTGTGGAGGAGTTCTACGTCGCAGGCTTGGATGTGGGCATCATCAAGAAAATAGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335730.6
ENST00000536736.5
ENST00000582408.6
CDS GCA 72 bp CCCTTATTGTTGTGGCCAACATTGATCTTCATCAGCTaGCCCAAATCCGGGGCATCCAGGATGAACCTGTCT +
Preference number: 6 (lower is better)
Translates to: PLLLWPTLIFIS*PKSGASRMNLS
Trigger: AGACAGGTTCATCCTGGATGCCCCGGATTTGGGGCAGCTGATGAAGATCAATGTTGGCCACAACAATAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp CCTTCCGCTGGGACAGCCAGTCTCCATAGTAGAACATaGTCAGGTCTCCAGTGTTCATGTTCTTCAGTAGGA +
Preference number: 6 (lower is better)
Translates to: PSAGTASLHSRT*SGLQCSCSSVG
Trigger: TCCTACTGAAGAACATGAACACTGGAGACCTGACCATGTTCTACTATGGAGACTGGCTGTCCCAGCGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 72 bp TGTCCTTGGACGCCCGTTCAAAAACTTTTGAGCGGCTaGAGAGGAAGAGCACTTCTGTCTTGCCTTTCTCTC +
Preference number: 6 (lower is better)
Translates to: CPWTPVQKLLSG*RGRALLSCLSL
Trigger: GAGAGAAAGGCAAGACAGAAGTGCTCTTCCTCTCCAGCCGCTCAAAAGTTTTTGAACGGGCGTCCAAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp AAGAAGTACACATTGCCGTACTCCATCTCGGTGATGGTGATGGTCTaGACATGCCAGGCAAGTTCTCTCTTGGGGATAAACCGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: KKYTLPYSISVMVMV*TCQASSLLGINRSS
Trigger: GGAAGACCGGTTTATCCCCAAGAGAGAACTTGCCTGGCATGTCAAGACCATCACCATCACCGAGATGGAGTACGGCAATGTGTACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp GGGAGCTCAATCCTAAACTTCTCGATTATGCCGGGTTTGAACCACTaGTTGTTGGGATTCAGGAGAATCTCATCTGTCCGCCCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GSSILNFSIMPGLNH*LLGFRRISSVRPFC
Trigger: GCAGAAGGGGCGGACAGATGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGGCATAATCGAGAAGTTTAGGATTGAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp ACAAAAGCCCATAAAGATGGCATGACTTGTCCAGGGTaGCCTGATGAGTTTCTGGCAGAGGTCAGACTCCAG +
Preference number: 6 (lower is better)
Translates to: TKAHKDGMTCPG*PDEFLAEVRLQ
Trigger: CTGGAGTCTGACCTCTGCCAGAAACTCATCAGGTCACCCTGGACAAGTCATGCCATCTTTATGGGCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS GCA 72 bp GCAATGTCTAGGATCTCCATGATGAAGGTGTCGTTCTaGTCCCGCTCAAACCTGGCTTTCTTTTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: AMSRISMMKVSF*SRSNLAFFLSS
Trigger: GCTGGACAAAAAGAAAGCCAGGTTTGAGCGGGAGCAGAACGACACCTTCATCATGGAGATCCTAGACATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000398686.8
ENST00000398705.7
ENST00000414184.1
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS GCA 72 bp GTGGAAACAACAGGAAAGAGAGTGTTCAATGTGAGCTaGATCATAATATCCCACCCCCTCCTCCCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: VETTGKRVFNVS*IIISHPLLPFL
Trigger: CAGGAAGGGGAGGAGGGGGTGGGATATTATGATGCAGCTCACATTGAACACTCTCTTTCCTGTTGTTTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335730.6
CDS CAA 72 bp ACATTGCCGTACTCCATCTCGGTGATGGTGATGGTCTaGACATGCCAGGCAAGTTCTCTCTTGGGGATAAAC +
Preference number: 6 (lower is better)
Translates to: TLPYSISVMVMV*TCQASSLLGIN
Trigger: GTTTATCCCCAAGAGAGAACTTGCCTGGCATGTCAAGACCATCACCATCACCGAGATGGAGTACGGCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp AGGCTCTGGACCTTGCTGGCAAAGCTCTCTGTCGTCTaGGTAACCTCGAATACCTTGAAGTACTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RLWTLLAKLSVV*VTSNTLKYFLF
Trigger: GAAGAGGAAGTACTTCAAGGTATTCGAGGTTACCAAGACGACAGAGAGCTTTGCCAGCAAGGTCCAGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp AGCTCAATCCTAAACTTCTCGATTATGCCGGGTTTGAACCACTTGTaGTTGGGATTCAGGAGAATCTCATCTGTCCGCCCCTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: SSILNFSIMPGLNHL*LGFRRISSVRPFCP
Trigger: TGGGCAGAAGGGGCGGACAGATGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGGCATAATCGAGAAGTTTAGGATTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp CCAAGATCCGGGAGCTCAATCCTAAACTTCTCGATTATGCCGGGTTaGAACCACTTGTTGTTGGGATTCAGGAGAATCTCATCTGTCCGC +
Preference number: 6 (lower is better)
Translates to: PRSGSSILNFSIMPG*NHLLLGFRRISSVR
Trigger: GCGGACAGATGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGGCATAATCGAGAAGTTTAGGATTGAGCTCCCGGATCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp ATAGAGAACCTCTTGCCCTCCAGGCTTTTTCAGTTAAGGAGGGTATaGTGTGGACACCATTGGCTGCACCGTGAGACTCAGAGATTCACA +
Preference number: 6 (lower is better)
Translates to: IENLLPSRLFQLRRV*CGHHWLHRETQRFT
Trigger: TGTGAATCTCTGAGTCTCACGGTGCAGCCAATGGTGTCCACACAATACCCTCCTTAACTGAAAAAGCCTGGAGGGCAAGAGGTTCTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414184.1
CDS TCA 72 bp GATGTTCACTTGAGATTGGGGTTTTGCCATTTAGCCTaGGGTGTGCTCCAAAGAGAATGTCTGCCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: DVHLRLGFCHLA*GVLQRECLPSV
Trigger: GACAGAGGGCAGACATTCTCTTTGGAGCACACCTCAGGCTAAATGGCAAAACCCCAATCTCAAGTGAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398686.8
ENST00000398705.7
CDS CCA 72 bp CAATGCTGTCCCTCTCAAACTTATCGCTGTTTGTCTTaGAGGACTTCAGGAGGGTCATTCCAGTGTCATCCT +
Preference number: 6 (lower is better)
Translates to: QCCPSQTYRCLS*RTSGGSFQCHP
Trigger: AGGATGACACTGGAATGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTGAGAGGGACAGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp TCAATGCTGTCCCTCTCAAACTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTCATTCCAGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: SMLSLSNLSLFV*EDFRRVIPVSS
Trigger: GGATGACACTGGAATGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTGAGAGGGACAGCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp AACTTCTCGATTATGCCGGGTTTGAACCACTTGTTGTaGGGATTCAGGAGAATCTCATCTGTCCGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: NFSIMPGLNHLL*GFRRISSVRPF
Trigger: GAAGGGGCGGACAGATGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGGCATAATCGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp CTAAACTTCTCGATTATGCCGGGTTTGAACCACTTGTaGTTGGGATTCAGGAGAATCTCATCTGTCCGCCCC +
Preference number: 6 (lower is better)
Translates to: LNFSIMPGLNHL*LGFRRISSVRP
Trigger: GGGGCGGACAGATGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGGCATAATCGAGAAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp ATCCCCTGTCCACACCGTCATTTCATAGAGAACCTCTaGCCCTCCAGGCTTTTTCAGTTAAGGAGGGTATTG +
Preference number: 6 (lower is better)
Translates to: IPCPHRHFIENL*PSRLFQLRRVL
Trigger: CAATACCCTCCTTAACTGAAAAAGCCTGGAGGGCAAGAGGTTCTCTATGAAATGACGGTGTGGACAGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414184.1
CDS CAA 90 bp GTGAAGATTTCAATGCTGTCCCTCTCAAACTTATCGCTGTTTGTCTaGGAGGACTTCAGGAGGGTCATTCCAGTGTCATCCTGTGTGCCA +
Preference number: 6 (lower is better)
Translates to: VKISMLSLSNLSLFV*EDFRRVIPVSSCVP
Trigger: TGGCACACAGGATGACACTGGAATGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTGAGAGGGACAGCATTGAAATCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 90 bp GTCGTCTTGGTAACCTCGAATACCTTGAAGTACTTCCTCTTCCTCTaGAGGGGGATGAGGCAGTCACAGTTAAAGAAGTACACATTGCCG +
Preference number: 6 (lower is better)
Translates to: VVLVTSNTLKYFLFL*RGMRQSQLKKYTLP
Trigger: CGGCAATGTGTACTTCTTTAACTGTGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTACCAAGACGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp GCCCGCATTCTTCTTAACCCCAGTCTTTATGGTCACTaGGAATGTGGTAGATTTATCTTTCTGCTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: ARILLNPSLYGH*ECGRFIFLLQG
Trigger: GCCCTGGAGCAGAAAGATAAATCTACCACATTCTCAGTGACCATAAAGACTGGGGTTAAGAAGAATGCGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS TCA 72 bp CCGTCATTTCATAGAGAACCTTTGTGGGACAGCTTCTaGCCTGGTCCAAGAAGCCCATTGGTTTTGATTCAG +
Preference number: 6 (lower is better)
Translates to: PSFHREPLWDSF*PGPRSPLVLIQ
Trigger: CTGAATCAAAACCAATGGGCTTCTTGGACCAGGTCAGAAGCTGTCCCACAAAGGTTCTCTATGAAATGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452425.2
CDS GCA 72 bp TCAAACGTGTCTGTGGTCCCCTTCCTAAAGGCCCGCTaGCTAGAAGAATTTTCCATGAGAAACTCTTTGGAT +
Preference number: 6 (lower is better)
Translates to: SNVSVVPFLKAR*LEEFSMRNSLD
Trigger: ATCCAAAGAGTTTCTCATGGAAAATTCTTCTAGGCAGCGGGCCTTTAGGAAGGGGACCACAGACACGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CCA 72 bp GGATGTTCACAGTTTGTCCCCAGCCTCATGGTTCTGTaGCACTTTTTCCTTTCCAAGCTTAAATGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: GCSQFVPSLMVL*HFFLSKLKCLG
Trigger: TCCAAGGCATTTAAGCTTGGAAAGGAAAAAGTGCCACAGAACCATGAGGCTGGGGACAAACTGTGAACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS CAA 72 bp TCCTCATTGGCATCCAGCCAGCGGTTGCAATTGAAGTaGTACTTGTCTTTGTTCAGAGTGTTCATCAGGGTC +
Preference number: 6 (lower is better)
Translates to: SSLASSQRLQLK*YLSLFRVFIRV
Trigger: GACCCTGATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp GCAGTCATTTCCCTCACTATCTCATTGTCATCCTCATaGGCATCCAGCCAGCGGTTGCAATTGAAGTTGTAC +
Preference number: 6 (lower is better)
Translates to: AVISLTISLSSS*ASSQRLQLKLY
Trigger: GTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAATGAGATAGTGAGGGAAATGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp TCCCTCACTATCTCATTGTCATCCTCATTGGCATCCAGCCAGCGGTaGCAATTGAAGTTGTACTTGTCTTTGTTCAGAGTGTTCATCAGG +
Preference number: 6 (lower is better)
Translates to: SLTISLSSSLASSQR*QLKLYLSLFRVFIR
Trigger: CCTGATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAATGAGATAGTGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp CTGTCCCTGCACCAATTACATCACCAGTGTATACCTTaGCTTCATACTTATTACCTCTGGGCATGTCCATGG +
Preference number: 6 (lower is better)
Translates to: LSLHQLHHQCIP*LHTYYLWACPW
Trigger: CCATGGACATGCCCAGAGGTAATAAGTATGAAGTCAAGGTATACACTGGTGATGTAATTGGTGCAGGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS TCA 72 bp TATCAGAAGAGGAAACAAAAGCCCATAAAGATGGCATaGCTTGTCCAGGGTGACCTGATGAGTTTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: YQKRKQKPIKMA*LVQGDLMSFWQ
Trigger: CTGCCAGAAACTCATCAGGTCACCCTGGACAAGTCATGCCATCTTTATGGGCTTTTGTTTCCTCTTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536111.1
CDS CAA 72 bp AGATTTCAATGCTGTCCCTCTCAAACTTATCGCTGTTaGTCTTGGAGGACTTCAGGAGGGTCATTCCAGTGT +
Preference number: 6 (lower is better)
Translates to: RFQCCPSQTYRC*SWRTSGGSFQC
Trigger: ACACTGGAATGACCCTCCTGAAGTCCTCCAAGACAAACAGCGATAAGTTTGAGAGGGACAGCATTGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000335730.6
ENST00000441551.6
ENST00000536111.1
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp GTAACCTCGAATACCTTGAAGTACTTCCTCTTCCTCTaGAGGGGGATGAGGCAGTCACAGTTAAAGAAGTAC +
Preference number: 6 (lower is better)
Translates to: VTSNTLKYFLFL*RGMRQSQLKKY
Trigger: GTACTTCTTTAACTGTGACTGCCTCATCCCCCTCAAGAGGAAGAGGAAGTACTTCAAGGTATTCGAGGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300591.11
ENST00000398686.8
ENST00000398705.7
ENST00000441551.6
ENST00000536736.5
ENST00000579038.6
ENST00000582408.6
ENST00000642948.1
CDS CAA 72 bp ATCCTAAACTTCTCGATTATGCCGGGTTTGAACCACTaGTTGTTGGGATTCAGGAGAATCTCATCTGTCCGC +
Preference number: 6 (lower is better)
Translates to: ILNFSIMPGLNH*LLGFRRISSVR
Trigger: GCGGACAGATGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGGCATAATCGAGAAGTTTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp GGGAGCTCAATCCTAAACTTCTCGATTATGCCGGGTTaGAACCACTTGTTGTTGGGATTCAGGAGAATCTCA +
Preference number: 6 (lower is better)
Translates to: GSSILNFSIMPG*NHLLLGFRRIS
Trigger: TGAGATTCTCCTGAATCCCAACAACAAGTGGTTCAAACCCGGCATAATCGAGAAGTTTAGGATTGAGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp TTGGCATCCAGCCAGCGGTTGCAATTGAAGTTGTACTaGTCTTTGTTCAGAGTGTTCATCAGGGTCATCCTT +
Preference number: 6 (lower is better)
Translates to: LASSQRLQLKLY*SLFRVFIRVIL
Trigger: AAGGATGACCCTGATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp TCATTGGCATCCAGCCAGCGGTTGCAATTGAAGTTGTACTTGTCTTaGTTCAGAGTGTTCATCAGGGTCATCCTTTCTAAATGCCATCCA +
Preference number: 6 (lower is better)
Translates to: SLASSQRLQLKLYLS*FRVFIRVILSKCHP
Trigger: TGGATGGCATTTAGAAAGGATGACCCTGATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 90 bp ACTATCTCATTGTCATCCTCATTGGCATCCAGCCAGCGGTTGCAATaGAAGTTGTACTTGTCTTTGTTCAGAGTGTTCATCAGGGTCATC +
Preference number: 6 (lower is better)
Translates to: TISLSSSLASSQRLQ*KLYLSLFRVFIRVI
Trigger: GATGACCCTGATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAATGAGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp TTGTCATCCTCATTGGCATCCAGCCAGCGGTTGCAATaGAAGTTGTACTTGTCTTTGTTCAGAGTGTTCATC +
Preference number: 6 (lower is better)
Translates to: LSSSLASSQRLQ*KLYLSLFRVFI
Trigger: GATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CAA 72 bp ATCTCATTGTCATCCTCATTGGCATCCAGCCAGCGGTaGCAATTGAAGTTGTACTTGTCTTTGTTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: ISLSSSLASSQR*QLKLYLSLFRV
Trigger: CACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGATGCCAATGAGGATGACAATGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1
CDS CCA 72 bp ATCCCCAGTGAAGACGGTGACAATATACGTAATAGCTaGTGTGGAAACAACAGGAAAGAGAGTGTTCAATGT +
Preference number: 6 (lower is better)
Translates to: IPSEDGDNIRNS*CGNNRKESVQC
Trigger: ACATTGAACACTCTCTTTCCTGTTGTTTCCACACCAGCTATTACGTATATTGTCACCGTCTTCACTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335730.6
CDS CAA 72 bp TCCAGCCAGCGGTTGCAATTGAAGTTGTACTTGTCTTaGTTCAGAGTGTTCATCAGGGTCATCCTTTCTAAA +
Preference number: 6 (lower is better)
Translates to: SSQRLQLKLYLS*FRVFIRVILSK
Trigger: TTTAGAAAGGATGACCCTGATGAACACTCTGAACAAAGACAAGTACAACTTCAATTGCAACCGCTGGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335730.6
ENST00000441551.6
ENST00000536736.5
ENST00000642948.1