RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LONRF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170500

Ensembl transcript IDs: ENST00000393437.8, ENST00000409647.1

Found 651 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTCCGTGTGTGGCACAGGGCATGCCTCGCCTCTTGGCTGCGCGTaGCTTACTAACTGGACCCCCACCCTGGGGAGCATGGCCGCTGCT +
Preference number: 1 (lower is better)
Translates to: ESVCGTGHASPLGCA*LTNWTPTLGSMAAA
Trigger: AGCAGCGGCCATGCTCCCCAGGGTGGGGGTCCAGTTAGTAAGCCACGCGCAGCCAAGAGGCGAGGCATGCCCTGTGCCACACACGGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp GGCACAGGGCATGCCTCGCCTCTTGGCTGCGCGTGGCTTACTAACTaGACCCCCACCCTGGGGAGCATGGCCGCTGCTGGCATGTTTGCA +
Preference number: 1 (lower is better)
Translates to: GTGHASPLGCAWLTN*TPTLGSMAAAGMFA
Trigger: TGCAAACATGCCAGCAGCGGCCATGCTCCCCAGGGTGGGGGTCCAGTTAGTAAGCCACGCGCAGCCAAGAGGCGAGGCATGCCCTGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp ATCGCACTCCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTaGAGGGATCCTCCGGCCATGCGGCCGGTGAGAGGCACCCTCCTC +
Preference number: 1 (lower is better)
Translates to: IALLGKGSGCWSPKR*RDPPAMRPVRGTLL
Trigger: GAGGAGGGTGCCTCTCACCGGCCGCATGGCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGGAGTGCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp CCCAGGGCCAGGCACCAGGCAGCTGGAGACCACCCCTGTAGCTACTaGCCAAGACATTCAAACCTGCCAATCCTACACTCTGCCCCCGCC +
Preference number: 1 (lower is better)
Translates to: PRARHQAAGDHPCSY*PRHSNLPILHSAPA
Trigger: GGCGGGGGCAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGTCTCCAGCTGCCTGGTGCCTGGCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp AGACACACAGAGGGAAGAAGGCCATGTGACGATGGACACGGAAACTaGAGTGATGCAGCCGCTGGCCGAGGAAGGCCGAGGTCGGCCAGC +
Preference number: 1 (lower is better)
Translates to: RHTEGRRPCDDGHGN*SDAAAGRGRPRSAS
Trigger: GCTGGCCGACCTCGGCCTTCCTCGGCCAGCGGCTGCATCACTCCAGTTTCCGTGTCCATCGTCACATGGCCTTCTTCCCTCTGTGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp TCTTGGCTGCCGTTTGCCTTCTGCCCTGAGGGGCACATACACCTTTaGAGGCCACCCACAGGGAGCTCCACGGCTTTGCCATGGCACACA +
Preference number: 1 (lower is better)
Translates to: SWLPFAFCPEGHIHL*RPPTGSSTALPWHT
Trigger: TGTGTGCCATGGCAAAGCCGTGGAGCTCCCTGTGGGTGGCCTGCAAAGGTGTATGTGCCCCTCAGGGCAGAAGGCAAACGGCAGCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp CCACCCTGGGGAGCATGGCCGCTGCTGGCATGTTTGCACTTTGGCTaGACCACGTATGCTGTGTCTGCCAGTGTCTGTGACAGTCCAGCC +
Preference number: 1 (lower is better)
Translates to: PPWGAWPLLACLHFG*TTYAVSASVCDSPA
Trigger: GGCTGGACTGTCACAGACACTGGCAGACACAGCATACGTGGTGCAGCCAAAGTGCAAACATGCCAGCAGCGGCCATGCTCCCCAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TTGGCTGCGCGTGGCTTACTAACTGGACCCCCACCCTGGGGAGCATaGCCGCTGCTGGCATGTTTGCACTTTGGCTGCACCACGTATGCT +
Preference number: 1 (lower is better)
Translates to: LAARGLLTGPPPWGA*PLLACLHFGCTTYA
Trigger: AGCATACGTGGTGCAGCCAAAGTGCAAACATGCCAGCAGCGGCCATGCTCCCCAGGGTGGGGGTCCAGTTAGTAAGCCACGCGCAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp GGCCAGCAGCCACACCAGCTGGAGGAGATGAAGGAGGAGTTTTCCTaGGGCCTTCAGAGAAAGCCCGGCCCTACTGGCACCTTGGCTTTG +
Preference number: 1 (lower is better)
Translates to: GQQPHQLEEMKEEFS*GLQRKPGPTGTLAL
Trigger: CAAAGCCAAGGTGCCAGTAGGGCCGGGCTTTCTCTGAAGGCCCCAGGAAAACTCCTCCTTCATCTCCTCCAGCTGGTGTGGCTGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp TCAGTGGTGGGCTGCTCACCTGAGGGGCCCTCCCCCAGCATCCAGTaGGGAATTAATCGCACTCCTGGGCAAAGGATCTGGGTGTTGGTC +
Preference number: 1 (lower is better)
Translates to: SVVGCSPEGPSPSIQ*GINRTPGQRIWVLV
Trigger: GACCAACACCCAGATCCTTTGCCCAGGAGTGCGATTAATTCCTCACTGGATGCTGGGGGAGGGCCCCTCAGGTGAGCAGCCCACCACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TCCAGTGAGGAATTAATCGCACTCCTGGGCAAAGGATCTGGGTGTTaGTCTCCAAAGCGCTGCAGGGATCCTCCGGCCATGCGGCCGGTG +
Preference number: 1 (lower is better)
Translates to: SSEELIALLGKGSGC*SPKRCRDPPAMRPV
Trigger: CACCGGCCGCATGGCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGGAGTGCGATTAATTCCTCACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TACACTCTGCCCCCGCCCATCTTCGCCTTTGCCATGGAGACACAGTaGAAAGCTGCTCGCCTAGTTCTGCCTCCTGACCACTCTGGTGCG +
Preference number: 1 (lower is better)
Translates to: YTLPPPIFAFAMETQ*KAARLVLPPDHSGA
Trigger: CGCACCAGAGTGGTCAGGAGGCAGAACTAGGCGAGCAGCTTTCCACTGTGTCTCCATGGCAAAGGCGAAGATGGGCGGGGGCAGAGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp GCAGAACATACAGTAGAGGGTCTGAGCCACGTTCCTCCTCACTCCTaGTTCTGCCTGTCTCCCATGCTTCCCCTCATGGCCCGGTGTGGT +
Preference number: 1 (lower is better)
Translates to: AEHTVEGLSHVPPHS*FCLSPMLPLMARCG
Trigger: ACCACACCGGGCCATGAGGGGAAGCATGGGAGACAGGCAGAAGCAGGAGTGAGGAGGAACGTGGCTCAGACCCTCTACTGTATGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp GGCACATACACCTTTGCAGGCCACCCACAGGGAGCTCCACGGCTTTaGCATGGCACACAATGTCTGCAGACAGGGTCTTCACCACATCCG +
Preference number: 1 (lower is better)
Translates to: GTYTFAGHPQGAPRL*HGTQCLQTGSSPHP
Trigger: CGGATGTGGTGAAGACCCTGTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGAGCTCCCTGTGGGTGGCCTGCAAAGGTGTATGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp ATACACCTTTGCAGGCCACCCACAGGGAGCTCCACGGCTTTGCCATaGCACACAATGTCTGCAGACAGGGTCTTCACCACATCCGCCTTC +
Preference number: 1 (lower is better)
Translates to: IHLCRPPTGSSTALP*HTMSADRVFTTSAF
Trigger: GAAGGCGGATGTGGTGAAGACCCTGTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGAGCTCCCTGTGGGTGGCCTGCAAAGGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp CTGCCTCCTGACCACTCTGGTGCGTCCTCCTCCTGTGGCCCTGCGTaGCCTGGTGCGCTCCTTTTCTCCAGAAATGCAAGTAACAAACTT +
Preference number: 1 (lower is better)
Translates to: LPPDHSGASSSCGPA*PGALLFSRNASNKL
Trigger: AAGTTTGTTACTTGCATTTCTGGAGAAAAGGAGCGCACCAGGCCACGCAGGGCCACAGGAGGAGGACGCACCAGAGTGGTCAGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TTCCTCCTCACTCCTGCTTCTGCCTGTCTCCCATGCTTCCCCTCATaGCCCGGTGTGGTCTGCTGGGCCTCTCCTTCTTTCATTTCTGTA +
Preference number: 1 (lower is better)
Translates to: FLLTPASACLPCFPS*PGVVCWASPSFISV
Trigger: TACAGAAATGAAAGAAGGAGAGGCCCAGCAGACCACACCGGGCCATGAGGGGAAGCATGGGAGACAGGCAGAAGCAGGAGTGAGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TACCGATGCCTCCTTAACACAGGACAGAGTCAAGCCTGGGCCCTCTaGTGTATTCTACCCACAGGAGGGTGGTCTCCCATGTCCTCAGTC +
Preference number: 1 (lower is better)
Translates to: YRCLLNTGQSQAWAL*CILPTGGWSPMSSV
Trigger: GACTGAGGACATGGGAGACCACCCTCCTGTGGGTAGAATACACCAGAGGGCCCAGGCTTGACTCTGTCCTGTGTTAAGGAGGCATCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp GCTTCTGCCTGTCTCCCATGCTTCCCCTCATGGCCCGGTGTGGTCTaGTGGGCCTCTCCTTCTTTCATTTCTGTAGGAATTGTGAGAACA +
Preference number: 1 (lower is better)
Translates to: ASACLPCFPSWPGVV*WASPSFISVGIVRT
Trigger: TGTTCTCACAATTCCTACAGAAATGAAAGAAGGAGAGGCCCAGCAGACCACACCGGGCCATGAGGGGAAGCATGGGAGACAGGCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TCTGCCTGTCTCCCATGCTTCCCCTCATGGCCCGGTGTGGTCTGCTaGGCCTCTCCTTCTTTCATTTCTGTAGGAATTGTGAGAACAGTC +
Preference number: 1 (lower is better)
Translates to: SACLPCFPSWPGVVC*ASPSFISVGIVRTV
Trigger: GACTGTTCTCACAATTCCTACAGAAATGAAAGAAGGAGAGGCCCAGCAGACCACACCGGGCCATGAGGGGAAGCATGGGAGACAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp GTCCCTCTGAATTCCCTACCTGGACATACCTACTTTCTTGGCTGGTaGTCTCAGGGCAATGACGGTAGCTCCCTCCACAAGGAGCAAGGA +
Preference number: 1 (lower is better)
Translates to: VPLNSLPGHTYFLGW*SQGNDGSSLHKEQG
Trigger: TCCTTGCTCCTTGTGGAGGGAGCTACCGTCATTGCCCTGAGACCACCAGCCAAGAAAGTAGGTATGTCCAGGTAGGGAATTCAGAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TGGGTCCCTCTGAATTCCCTACCTGGACATACCTACTTTCTTGGCTaGTGGTCTCAGGGCAATGACGGTAGCTCCCTCCACAAGGAGCAA +
Preference number: 1 (lower is better)
Translates to: WVPLNSLPGHTYFLG*WSQGNDGSSLHKEQ
Trigger: TTGCTCCTTGTGGAGGGAGCTACCGTCATTGCCCTGAGACCACCAGCCAAGAAAGTAGGTATGTCCAGGTAGGGAATTCAGAGGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp GGTCATCCTCCCGCAGACCCCTTGGTGTCCCTTAGATTAACTGAGTaGACAGCAGTGGGAGTTCACAGAGGGTACAGATGGCATTGCCAA +
Preference number: 1 (lower is better)
Translates to: GHPPADPLVSLRLTE*TAVGVHRGYRWHCQ
Trigger: TTGGCAATGCCATCTGTACCCTCTGTGAACTCCCACTGCTGTTCACTCAGTTAATCTAAGGGACACCAAGGGGTCTGCGGGAGGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp CCAGCCGAGACTCATGACAGTAAACTTCCTCAGGGTTCTCTATTATaGTCAGGGCCAATCCTTCACCTCGAGGGCTGTCGTAGTACCCCG +
Preference number: 1 (lower is better)
Translates to: PAETHDSKLPQGSLL*SGPILHLEGCRSTP
Trigger: CGGGGTACTACGACAGCCCTCGAGGTGAAGGATTGGCCCTGATCATAATAGAGAACCCTGAGGAAGTTTACTGTCATGAGTCTCGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp TCCTGTCCTGGGTCTCCACAGCCACTCCCTCCCTGTGGTGACACATaGACACCACGAGTCTCTACTTATCCTTTACTGAACTATCAGTGC +
Preference number: 1 (lower is better)
Translates to: SCPGSPQPLPPCGDT*TPRVSTYPLLNYQC
Trigger: GCACTGATAGTTCAGTAAAGGATAAGTAGAGACTCGTGGTGTTCATGTGTCACCACAGGGAGGGAGTGGCTGTGGAGACCCAGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp ACACTCCTTCATCTCTTCAGAGTGGCAGGCATCACTGGAAGTCACTaGGACACACATGCCACTTCTCGGAATCCACAATGCTGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: TLLHLFRVAGITGSH*DTHATSRNPQCWAL
Trigger: CAGAGCCCAGCATTGTGGATTCCGAGAAGTGGCATGTGTGTCTCAGTGACTTCCAGTGATGCCTGCCACTCTGAAGAGATGAAGGAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp GATGCTGTCACCCTGACCCGGTTCCTGATGCGTGATGTTTCTAAGTaGTCAGTAAGTACCAATCTACTCCCACACTGCAGTATGTGGGCG +
Preference number: 1 (lower is better)
Translates to: DAVTLTRFLMRDVSK*SVSTNLLPHCSMWA
Trigger: CGCCCACATACTGCAGTGTGGGAGTAGATTGGTACTTACTGAGCACTTAGAAACATCACGCATCAGGAACCGGGTCAGGGTGACAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp TCTCTTCAGAGTGGCAGGCATCACTGGAAGTCACTGAGACACACATaGCACTTCTCGGAATCCACAATGCTGGGCTCTGGGAAAAGGCAT +
Preference number: 1 (lower is better)
Translates to: SLQSGRHHWKSLRHT*HFSESTMLGSGKRH
Trigger: ATGCCTTTTCCCAGAGCCCAGCATTGTGGATTCCGAGAAGTGGCATGTGTGTCTCAGTGACTTCCAGTGATGCCTGCCACTCTGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp ACTGAGACACACATGCCACTTCTCGGAATCCACAATGCTGGGCTCTaGGAAAAGGCATTCGCTACAACTTCCACAGCCCTGATAGGTTCC +
Preference number: 1 (lower is better)
Translates to: TETHMPLLGIHNAGL*EKAFATTSTALIGS
Trigger: GGAACCTATCAGGGCTGTGGAAGTTGTAGCGAATGCCTTTTCCCAGAGCCCAGCATTGTGGATTCCGAGAAGTGGCATGTGTGTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp GAAGGAGGAGTTTTCCTGGGGCCTTCAGAGAAAGCCCGGCCCTACTaGCACCTTGGCTTTGGATTTCTAATGTCCAGAAATGTGAGCGAA +
Preference number: 1 (lower is better)
Translates to: EGGVFLGPSEKARPY*HLGFGFLMSRNVSE
Trigger: TTCGCTCACATTTCTGGACATTAGAAATCCAAAGCCAAGGTGCCAGTAGGGCCGGGCTTTCTCTGAAGGCCCCAGGAAAACTCCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp GAGGAGTCCACTAATGCTGATACATGCCCTGCTTCTGCCGAAACATaGCCCCCTACACTCCCATGTCTAAATGGAAACTCTGGTAGAAGG +
Preference number: 1 (lower is better)
Translates to: EESTNADTCPASAET*PPTLPCLNGNSGRR
Trigger: CCTTCTACCAGAGTTTCCATTTAGACATGGGAGTGTAGGGGGCCATGTTTCGGCAGAAGCAGGGCATGTATCAGCATTAGTGGACTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TCTTGCCAGGACACTCCTTCATCTCTTCAGAGTGGCAGGCATCACTaGAAGTCACTGAGACACACATGCCACTTCTCGGAATCCACAATG +
Preference number: 1 (lower is better)
Translates to: SCQDTPSSLQSGRHH*KSLRHTCHFSESTM
Trigger: CATTGTGGATTCCGAGAAGTGGCATGTGTGTCTCAGTGACTTCCAGTGATGCCTGCCACTCTGAAGAGATGAAGGAGTGTCCTGGCAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp CCAGCTTCACATTTATGGCCAACTGTTGGACCACTGCCCAAGAGTTaGCCCCTTCAGGATGAAAAACTCTGGGACTCTTCCTCACAGATA +
Preference number: 1 (lower is better)
Translates to: PASHLWPTVGPLPKS*PLQDEKLWDSSSQI
Trigger: TATCTGTGAGGAAGAGTCCCAGAGTTTTTCATCCTGAAGGGGGCAACTCTTGGGCAGTGGTCCAACAGTTGGCCATAAATGTGAAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp GTGCCTAAGGGCTTTGGATGCAAGAAACTATCCCTCTCAGCCTCATaGTACCCTATTAAAGCAGTAAATGGCTGGATGCCTACTGGGCTC +
Preference number: 1 (lower is better)
Translates to: VPKGFGCKKLSLSAS*YPIKAVNGWMPTGL
Trigger: GAGCCCAGTAGGCATCCAGCCATTTACTGCTTTAATAGGGTAGCATGAGGCTGAGAGGGATAGTTTCTTGCATCCAAAGCCCTTAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp GGCACCCTCCTCACAGAAATGACAGCCGCCAAAAGGTTTAAATGTTaGTTTAAGAGCCTTGCAGCTGTTGTGACTCATTCCTCAATCCGG +
Preference number: 1 (lower is better)
Translates to: GTLLTEMTAAKRFKC*FKSLAAVVTHSSIR
Trigger: CCGGATTGAGGAATGAGTCACAACAGCTGCAAGGCTCTTAAAGCAACATTTAAACCTTTTGGCGGCTGTCATTTCTGTGAGGAGGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp GGAGTTCACAGAGGGTACAGATGGCATTGCCAACCCTCATATAAATaGTGGAGCCCAAGAGAATGTTGCTGCTTCCCATCTTTTAGCCAG +
Preference number: 1 (lower is better)
Translates to: GVHRGYRWHCQPSYK*WSPRECCCFPSFSQ
Trigger: CTGGCTAAAAGATGGGAAGCAGCAACATTCTCTTGGGCTCCATCATTTATATGAGGGTTGGCAATGCCATCTGTACCCTCTGTGAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp TGCAGACAGGGTCTTCACCACATCCGCCTTCTCCAGGAGCACAAATaGGGAAACTCATTGTCACACTCATTAAGGACATACAAGTCCAAC +
Preference number: 1 (lower is better)
Translates to: CRQGLHHIRLLQEHK*GNSLSHSLRTYKSN
Trigger: GTTGGACTTGTATGTCCTTAATGAGTGTGACAATGAGTTTCCTCATTTGTGCTCCTGGAGAAGGCGGATGTGGTGAAGACCCTGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp GGACCTTCTGGGTATAATTGTATAATTGGATGCACTGGGTCCCTCTaGATTCCCTACCTGGACATACCTACTTTCTTGGCTGGTGGTCTC +
Preference number: 1 (lower is better)
Translates to: GPSGYNCIIGCTGSL*IPYLDIPTFLAGGL
Trigger: GAGACCACCAGCCAAGAAAGTAGGTATGTCCAGGTAGGGAATTCAGAGGGACCCAGTGCATCCAATTATACAATTATACCCAGAAGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp CTCTGGTTAAGAATGTCCACCTTACAGACGAGGAAGCCAACCAAATaGACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGAT +
Preference number: 1 (lower is better)
Translates to: LWLRMSTLQTRKPTK*TSWLGQREHMSISD
Trigger: ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGGCTTCCTCGTCTGTAAGGTGGACATTCTTAACCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp ACCTCACACAAGGTCAGATCCCACCAGACACAGAATTGTCATTTTTaGGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCA +
Preference number: 1 (lower is better)
Translates to: TSHKVRSHQTQNCHF*GGLNVWQASHFGTS
Trigger: TGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGGGATCTGACCTTGTGTGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR GCA 90 bp AGATACTCATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATaGGCCAACCAGCCGAGACTCATGACAGTAAACTTCCTCAGGGTT +
Preference number: 1 (lower is better)
Translates to: RYSCCKLHLHPSKVT*ANQPRLMTVNFLRV
Trigger: AACCCTGAGGAAGTTTACTGTCATGAGTCTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACATGAGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp AATGAACAAAGCAAAACTTGCAGCTGTGATGTGGTCGTGACCCTCTaGTTAAGAATGTCCACCTTACAGACGAGGAAGCCAACCAAATGC +
Preference number: 1 (lower is better)
Translates to: NEQSKTCSCDVVVTL*LRMSTLQTRKPTKC
Trigger: GCATTTGGTTGGCTTCCTCGTCTGTAAGGTGGACATTCTTAACCAGAGGGTCACGACCACATCACAGCTGCAAGTTTTGCTTTGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TCTAAGTGCTCAGTAAGTACCAATCTACTCCCACACTGCAGTATGTaGGCGTGTGATGCTGAACAGAGAGAGCACGATGTGATCATAGTT +
Preference number: 1 (lower is better)
Translates to: SKCSVSTNLLPHCSM*ACDAEQREHDVIIV
Trigger: AACTATGATCACATCGTGCTCTCTCTGTTCAGCATCACACGCCCACATACTGCAGTGTGGGAGTAGATTGGTACTTACTGAGCACTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp ACGAAGACACACAATGGTCTCCTCAAACAACTCCATTTCAAATTCTaGTCTGCAAACAGACCCCGAAATGGGCCTCTATCTTGCACCACA +
Preference number: 1 (lower is better)
Translates to: TKTHNGLLKQLHFKF*SANRPRNGPLSCTT
Trigger: TGTGGTGCAAGATAGAGGCCCATTTCGGGGTCTGTTTGCAGACCAGAATTTGAAATGGAGTTGTTTGAGGAGACCATTGTGTGTCTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp GGAAGCCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATaGGTATCTCAGATTCAGTTATTCCAATCAATATCACCAACGTGC +
Preference number: 1 (lower is better)
Translates to: GSQPNAPAGWARENI*VSQIQLFQSISPTC
Trigger: GCACGTTGGTGATATTGATTGGAATAACTGAATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp CACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATaGCTGACATTTATAAAAGCACAAGGGCTGCCAGAAACCTTGACA +
Preference number: 1 (lower is better)
Translates to: HKHLMKHNEWTAIRP*LTFIKAQGLPETLT
Trigger: TGTCAAGGTTTCTGGCAGCCCTTGTGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR GCA 90 bp AGGAATTGTGAGAACAGTCAACGCTGTCAATGGCATCCACCTTTCTaGGTCCTCAATCAGTTACTTTTATCAGACCTGGGTGCAAATTCG +
Preference number: 1 (lower is better)
Translates to: RNCENSQRCQWHPPF*VLNQLLLSDLGANS
Trigger: CGAATTTGCACCCAGGTCTGATAAAAGTAACTGATTGAGGACGCAGAAAGGTGGATGCCATTGACAGCGTTGACTGTTCTCACAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp AGAATGTCCACCTTACAGACGAGGAAGCCAACCAAATGCACCAGCTaGTTGGGCCAGAGAGAACATATGAGTATCTCAGATTCAGTTATT +
Preference number: 1 (lower is better)
Translates to: RMSTLQTRKPTKCTS*LGQREHMSISDSVI
Trigger: AATAACTGAATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGGCTTCCTCGTCTGTAAGGTGGACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp AGTATCCTAACTTTCAATTCTGAAGATGAGGACACACACGGGGGATaGGATAAGCTAAAAATGCCACGGGCTTTCAGAAAGCTGCCTTTG +
Preference number: 1 (lower is better)
Translates to: SILTFNSEDEDTHGG*DKLKMPRAFRKLPL
Trigger: CAAAGGCAGCTTTCTGAAAGCCCGTGGCATTTTTAGCTTATCCCATCCCCCGTGTGTGTCCTCATCTTCAGAATTGAAAGTTAGGATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp CGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCACAATaGATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCACA +
Preference number: 1 (lower is better)
Translates to: RPILEPHPQALDEAQ*MDGYSSMPDIYKST
Trigger: TGTGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CCA 90 bp CCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATaGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCACAAGGG +
Preference number: 1 (lower is better)
Translates to: PFWNLIHKHLMKHNE*TAIRPCLTFIKAQG
Trigger: CCCTTGTGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CCA 90 bp TTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTaGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACG +
Preference number: 1 (lower is better)
Translates to: LSFLRRTQCLASVPF*NLIHKHLMKHNEWT
Trigger: CGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CCA 90 bp ACTACTTCTTGGGTAAGGACTAGTTTGGGCTCCTGCACTGAACAATaGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCA +
Preference number: 1 (lower is better)
Translates to: TTSWVRTSLGSCTEQ*CDYSISQTTSQQHA
Trigger: TGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCAAGAAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR GCA 90 bp TATCCAGAGGCTACTACTTCTTGGGTAAGGACTAGTTTGGGCTCCTaGACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCA +
Preference number: 1 (lower is better)
Translates to: YPEATTSWVRTSLGS*TEQWCDYSISQTTS
Trigger: TGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCAAGAAGTAGTAGCCTCTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR GCA 90 bp TGCTCTCGTCTGCGTCATCATTGTTGTTCAGACTTTTACATAACATaGCGAAGGAGAAGACTCAGAAAGCCAGGCAGAATCATGAAGAAA +
Preference number: 1 (lower is better)
Translates to: CSRLRHHCCSDFYIT*RRRRLRKPGRIMKK
Trigger: TTTCTTCATGATTCTGCCTGGCTTTCTGAGTCTTCTCCTTCGGCATGTTATGTAAAAGTCTGAACAACAATGATGACGCAGACGAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp GCTGCCTTTGGGATCTTACTTGCATTTCAAAGACACAGGCAGGTTTaGGCGATGAATGGAAAAATACAGAACAGCATGTATTGTTCCTCA +
Preference number: 1 (lower is better)
Translates to: AAFGILLAFQRHRQV*AMNGKIQNSMYCSS
Trigger: TGAGGAACAATACATGCTGTTCTGTATTTTTCCATTCATCGCCCAAACCTGCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp AAGATGAGGTCATCCTGGATTAGGGTGGAAGTTAAATCTAATGACTaGTGTCCTTATATAAGGAAAGGGATATCTGGACACAGACACACA +
Preference number: 1 (lower is better)
Translates to: KMRSSWIRVEVKSND*CPYIRKGISGHRHT
Trigger: TGTGTGTCTGTGTCCAGATATCCCTTTCCTTATATAAGGACACCAGTCATTAGATTTAACTTCCACCCTAATCCAGGATGACCTCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp ATATTCAAACCAGACTTAAACTTCAGAAACAGAAGGCCAGATGAGTaGCCTGTATCACAGGATATGACAACACATCACCTATCTCCAAAC +
Preference number: 1 (lower is better)
Translates to: IFKPDLNFRNRRPDE*PVSQDMTTHHLSPN
Trigger: GTTTGGAGATAGGTGATGTGTTGTCATATCCTGTGATACAGGTCACTCATCTGGCCTTCTGTTTCTGAAGTTTAAGTCTGGTTTGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp TTACATATTCAAACCAGACTTAAACTTCAGAAACAGAAGGCCAGATaGGTGACCTGTATCACAGGATATGACAACACATCACCTATCTCC +
Preference number: 1 (lower is better)
Translates to: LHIQTRLKLQKQKAR*VTCITGYDNTSPIS
Trigger: GGAGATAGGTGATGTGTTGTCATATCCTGTGATACAGGTCACTCATCTGGCCTTCTGTTTCTGAAGTTTAAGTCTGGTTTGAATATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp AAGTTTCATCCAACAGTGCTGAAGGAGTTAAGATTAGTCACTGCATaGGGAAGCGGGAAAATGCCTGATCCTTACAACTCACATATAAAA +
Preference number: 1 (lower is better)
Translates to: KFHPTVLKELRLVTA*GSGKMPDPYNSHIK
Trigger: TTTTATATGTGAGTTGTAAGGATCAGGCATTTTCCCGCTTCCTCATGCAGTGACTAATCTTAACTCCTTCAGCACTGTTGGATGAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp CAGATTCAGTTATTCCAATCAATATCACCAACGTGCATTACAGGATaGAAGTCATACTACTGTCCTTTAACAGATAACACCTGGTCTGAT +
Preference number: 1 (lower is better)
Translates to: QIQLFQSISPTCITG*KSYYCPLTDNTWSD
Trigger: ATCAGACCAGGTGTTATCTGTTAAAGGACAGTAGTATGACTTCCATCCTGTAATGCACGTTGGTGATATTGATTGGAATAACTGAATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp CAGCTTTACTTCAGGAAGGCTCGTGGAGAAGCTGTGATCACATTGTaGTTATTTAGATACTTCCAAATGGAAATGGCATTGATAACTATT +
Preference number: 1 (lower is better)
Translates to: QLYFRKARGEAVITL*LFRYFQMEMALITI
Trigger: AATAGTTATCAATGCCATTTCCATTTGGAAGTATCTAAATAACCACAATGTGATCACAGCTTCTCCACGAGCCTTCCTGAAGTAAAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp TGTAACGAGAGCATGCCTATTGGAGCACTTTCAGTACAATTAAGCTaGAATGTCCTGACATTGAATGAGAGATTACATTATTTTCTGAGA +
Preference number: 1 (lower is better)
Translates to: CNESMPIGALSVQLS*NVLTLNERLHYFLR
Trigger: TCTCAGAAAATAATGTAATCTCTCATTCAATGTCAGGACATTCCAGCTTAATTGTACTGAAAGTGCTCCAATAGGCATGCTCTCGTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 90 bp GATCTTACTTGCATTTCAAAGACACAGGCAGGTTTGGGCGATGAATaGAAAAATACAGAACAGCATGTATTGTTCCTCAAGAAGAAAAAT +
Preference number: 1 (lower is better)
Translates to: DLTCISKTQAGLGDE*KNTEQHVLFLKKKN
Trigger: ATTTTTCTTCTTGAGGAACAATACATGCTGTTCTGTATTTTTCCATTCATCGCCCAAACCTGCCTGTGTCTTTGAAATGCAAGTAAGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 90 bp TGGAGCACTTTCAGTACAATTAAGCTGGAATGTCCTGACATTGAATaGGAGATTACATTATTTTCTGAGAAATCCTTAGAATTGGCATCT +
Preference number: 1 (lower is better)
Translates to: WSTFSTIKLECPDIE*EITLFSEKSLELAS
Trigger: AGATGCCAATTCTAAGGATTTCTCAGAAAATAATGTAATCTCTCATTCAATGTCAGGACATTCCAGCTTAATTGTACTGAAAGTGCTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 90 bp CCAAGGTATACTTTCTTATGTTTTGACATTCGTTTGATTACAACATaGAATTTACAACACCTGGGACTACAACAGGACATTAAACACAGT +
Preference number: 1 (lower is better)
Translates to: PRYTFLCFDIRLITT*NLQHLGLQQDIKHS
Trigger: ACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATTGCATGTTGTAATCAAACGAATGTCAAAACATAAGAAAGTATACCTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCCAACTCCTCAACCCCTaGGGGAGGAGCACCCACCCC +
Preference number: 2 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGQLLNP*GRSTHP
Trigger: GGGGTGGGTGCTCCTCCCCCAGGGGTTGAGGAGTTG...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCCCTCACTCCTGCTTCTaGCTGTCTCCCATGCTTCCC +
Preference number: 2 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGPHSCF*LSPMLP
Trigger: GGGAAGCATGGGAGACAGGCAGAAGCAGGAGTGAGG...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCCTCTGGCAAGCTCTATaGAGCCCTGGAGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGLWQAL*SPGVSG
Trigger: GCCAGAGACTCCAGGGCTGCATAGAGCTTGCCAGAG...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCGGGCACTCCTGTTGGTaGCCTCAGAGACCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGGHSCW*PQRPLH
Trigger: ATGAAGGGGTCTCTGAGGGCACCAACAGGAGTGCCC...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR TCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAAGTCCTGTGCTGTCAGTaGACTGCATTCCCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: HLRGLADPGETAHPRVSQVLCCQ*TAFPKH
Trigger: GTGCTTGGGGAATGCAGTTCACTGACAGCACAGGAC...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 90 bp GGGCACATACACCTTTGCAGGCCACCCACAGGGAGCTCCACGGCTTaGCCATGGCACACAATGTCTGCAGACAGGGTCTTCACCACATCC +
Preference number: 2 (lower is better)
Translates to: GHIHLCRPPTGSSTA*PWHTMSADRVFTTS
Trigger: GGATGTGGTGAAGACCCTGTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGAGCTCCCTGTGGGTGGCCTGCAAAGGTGTATGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAATTCCCTGCCCTTTCCTaGAGAACATACAGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: HLRGLADPGETAHPRVSQFPALS*RTYSRG
Trigger: CCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAA...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp AAAGGAGACCCCACGTCTCACATCCCAGAAGACATTGCCCAGCCCAGCAGCTCAACGAGATTGCGCCATTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: KGDPTSHIPEDIAQPSSSTRLRH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGCGCAATCTCGT...TGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGTGAGACGTGGGGTCTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGCCACCCTGGGGAGCATaGCCGCTGCTGGCATGTTTG +
Preference number: 2 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLPPWGA*PLLACL
Trigger: CAAACATGCCAGCAGCGGCCATGCTCCCCAGGGTGG...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGCCTACCACCCCAGCCTaGTTTCCACCGCGACTTCCT +
Preference number: 2 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLPTTPA*FPPRLP
Trigger: AGGAAGTCGCGGTGGAAAGCAGGCTGGGGTGGTAGG...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 90 bp GGGCTCCCACAGGCCGTGCAGCTGCTCATCCGATACGGGACCCACTaGAGCCTAAACTTCCACCAAAAAGCAAGAACCAAAACCCTATCA +
Preference number: 2 (lower is better)
Translates to: GLPQAVQLLIRYGTH*SLNFHQKARTKTLS
Trigger: TGATAGGGTTTTGGTTCTTGCTTTTTGGTGGAAGTTTAGGCTCAAGTGGGTCCCGTATCGGATGAGCAGCTGCACGGCCTGTGGGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 90 bp CTCCCTCCACAAGGAGCAAGGAACGGCTTTCCCTGTGAGCTTGTGTaGGATGAGAGTCTGATAACCGAGCCAGCAACGCTGAAGTCAGTG +
Preference number: 2 (lower is better)
Translates to: LPPQGARNGFPCELV*DESLITEPATLKSV
Trigger: CACTGACTTCAGCGTTGCTGGCTCGGTTATCAGACTCTCATCCAACACAAGCTCACAGGGAAAGCCGTTCCTTGCTCCTTGTGGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR TCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTCCAGTAGAGAGGGGGTaGTGCTGGCAAAGGGGTTCG +
Preference number: 2 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSPVERG*CWQRGS
Trigger: CGAACCCCTTTGCCAGCATCACCCCCTCTCTACTGG...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAACTTTGGGATCTTACTTaGATTTCAAAGACACAGGCA +
Preference number: 2 (lower is better)
Translates to: HLRGLADPGETAHPRVSQLWDLT*ISKTQA
Trigger: TGCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAG...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 90 bp CTAAATCACATCTCTCCACAGGTGCTACAGCTGGGATTCCAGGTCTaGCCAGGACACTCCTTCATCTCTTCAGAGTGGCAGGCATCACTG +
Preference number: 2 (lower is better)
Translates to: LNHISPQVLQLGFQV*PGHSFISSEWQASL
Trigger: CAGTGATGCCTGCCACTCTGAAGAGATGAAGGAGTGTCCTGGCAAGACCTGGAATCCCAGCTGTAGCACCTGTGGAGAGATGTGATTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTGTCTATGCTAAAACATaGGGAGATGGGCCGGGCACG +
Preference number: 2 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSVYAKT*GDGPGT
Trigger: CGTGCCCGGCCCATCTCCCCATGTTTTAGCATAGAC...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR TCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCCCCTGTGGTGACACATaGACACCACGAGTCTCTACT +
Preference number: 2 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIPCGDT*TPRVST
Trigger: AGTAGAGACTCGTGGTGTTCATGTGTCACCACAGGG...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp AAAGGAGACCCCACGTCTCACATCCCAGAAGACATTGCCCAGCCCAGCAGCTCAAATAGAATCAGAATGTaGCCTTTGGGAAGGACGATG +
Preference number: 2 (lower is better)
Translates to: KGDPTSHIPEDIAQPSSSNRIRM*PLGRTM
Trigger: CATCGTCCTTCCCAAAGGCCACATTCTGATTCTATT...TGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGTGAGACGTGGGGTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAAGGTTATCTCCCTGTGTaGGCGATGGCTCACGCAGCT +
Preference number: 2 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKGYLPV*AMAHAA
Trigger: AGCTGCGTGAGCCATCGCCCACACAGGGAGATAACC...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTTTTATGTCCCCAACTTaGGGGAGTGCAATGGTGGCA +
Preference number: 2 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSFMSPT*GSAMVA
Trigger: TGCCACCATTGCACTCCCCCAAGTTGGGGACATAAA...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGTTCATCTCTTCAGAGTaGCAGGCATCACTGGAAGTC +
Preference number: 2 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLFISSE*QASLEV
Trigger: GACTTCCAGTGATGCCTGCCACTCTGAAGAGATGAA...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGAATCTACTCCCACACTaGAGTATGTGGGCGTGTGAT +
Preference number: 2 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAENLLPH*SMWACD
Trigger: ATCACACGCCCACATACTGCAGTGTGGGAGTAGATT...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGAGTTGTTTTCCAACTATaGGCTCCATTCAGACTTCAG +
Preference number: 2 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRVVFQL*APFRLQ
Trigger: CTGAAGTCTGAATGGAGCCCATAGTTGGAAAACAAC...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 90 bp CAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTaGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACA +
Preference number: 2 (lower is better)
Translates to: QCLASVPFWNLIHKH*MKHNEWTAIRPCLT
Trigger: TGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 90 bp GGATGGGATAAGCTAAAAATGCCACGGGCTTTCAGAAAGCTGCCTTaGGGATCTTACTTGCATTTCAAAGACACAGGCAGGTTTGGGCGA +
Preference number: 2 (lower is better)
Translates to: GWDKLKMPRAFRKLP*GSYLHFKDTGRFGR
Trigger: TCGCCCAAACCTGCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAGGCAGCTTTCTGAAAGCCCGTGGCATTTTTAGCTTATCCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR TCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGTCAGAGCCAGTGCTCTaGATGAAGTGTCTCACCCCA +
Preference number: 2 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLSEPVL*MKCLTP
Trigger: TGGGGTGAGACACTTCATTCAGAGCACTGGCTCTGA...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGTTTCAAATTCTGGTCTaGAAACAGACCCCGAAATGG +
Preference number: 2 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLFQILV*KQTPKW
Trigger: CCATTTCGGGGTCTGTTTGCAGACCAGAATTTGAAA...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 90 bp AACCTCACACAAGGTCAGATCCCACCAGACACAGAATTGTCATTTTaGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTC +
Preference number: 2 (lower is better)
Translates to: NLTQGQIPPDTELSF*RRTQCLASVPFWNL
Trigger: GAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGGGATCTGACCTTGTGTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 90 bp CTTCAGGCTAACCTCACACAAGGTCAGATCCCACCAGACACAGAATaGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTT +
Preference number: 2 (lower is better)
Translates to: LQANLTQGQIPPDTE*SFLRRTQCLASVPF
Trigger: AAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGGGATCTGACCTTGTGTGAGGTTAGCCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR TCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAATTAGGGCCTTTCGGTTaGCTCACACCTCACACAAAC +
Preference number: 2 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKLGPFG*LTPHTN
Trigger: GTTTGTGTGAGGTGTGAGTCAACCGAAAGGCCCTAA...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR TCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCCTTGCACCACAAACCTaGATCTCTCTTAATTTAGGG +
Preference number: 2 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSILAPQT*ISLNLG
Trigger: CCCTAAATTAAGAGAGATTCAGGTTTGTGGTGCAAG...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACTATGTTGCTCTCGTCTaGGTCATCATTGTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHYVALV*VIIVVQ
Trigger: CTGAACAACAATGATGACGCAGACGAGAGCAACATA...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTCACGCCTTTACCATCTaGCAGAGCCAGATGCTGACT +
Preference number: 2 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTHAFTI*QSQMLT
Trigger: AGTCAGCATCTGGCTCTGCCAGATGGTAAAGGCGTG...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CCA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTCACGCCTTTACCATCTaGCAGAGCCAGATGCTGACT +
Preference number: 2 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRHAFTI*QSQMLT
Trigger: AGTCAGCATCTGGCTCTGCCAGATGGTAAAGGCGTG...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 90 bp ATCCCACCAGACACAGAATTGTCATTTTTGAGGAGGACTCAATGTTaGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATG +
Preference number: 2 (lower is better)
Translates to: IPPDTELSFLRRTQC*ASVPFWNLIHKHLM
Trigger: CATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR TCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGCTTGATGAAGCACAATaGATGGACGGCTATTCGTCC +
Preference number: 2 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLLDEAQ*MDGYSS
Trigger: GGACGAATAGCCGTCCATTCATTGTGCTTCATCAAG...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR TCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCAGGTCTTCTGGCATGTaGGATGCATTTTGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIRSSGM*DAFCFL
Trigger: AAGAAAACAAAATGCATCTCACATGCCAGAAGACCT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACTCAATATCACCAACGTaGATTACAGGATGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHSISPT*ITGWKS
Trigger: TGACTTCCATCCTGTAATGCACGTTGGTGATATTGA...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCGCAAGCGTCCCATTTTaGAACCTCATCCACAAGCAC +
Preference number: 2 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGASVPF*NLIHKH
Trigger: GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGC...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCTTCCAGATAAAAACGTaGTTCCCCCATATTGTCTAC +
Preference number: 2 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIFQIKT*FPHIVY
Trigger: GTAGACAATATGGGGGAACCACGTTTTTATCTGGAA...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 90 bp ACACAGTTCTATCCAGAGGCTACTACTTCTTGGGTAAGGACTAGTTaGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAG +
Preference number: 2 (lower is better)
Translates to: TQFYPEATTSWVRTS*GSCTEQWCDYSISQ
Trigger: CTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCAAGAAGTAGTAGCCTCTGGATAGAACTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR TCA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACATGCTGACTGGGAAGTaGATCCTTCTTTCTCGTGAA +
Preference number: 2 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYMLTGK*ILLSRE
Trigger: TTCACGAGAAAGAAGGATTCACTTCCCAGTCAGCAT...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR GCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTAATAAAAACGTATGTTaGTCTCGTCTGCGTCATCAT +
Preference number: 2 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSNKNVC*SRLRHH
Trigger: ATGATGACGCAGACGAGAGCAACATACGTTTTTATT...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAAGGAAGCAGACCGTTCTaGTTTAGCTTAATTGGTAGC +
Preference number: 2 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKGSRPF*FSLIGS
Trigger: GCTACCAATTAAGCTAAAGCAGAACGGTCTGCTTCC...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGGCAAGCGTCCCATTTTaGAACCTCATCCACAAGCAC +
Preference number: 2 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRASVPF*NLIHKH
Trigger: GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGC...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CCA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTGGAGGACTCAATGTTTaGCAAGCGTCCCATTTTGGA +
Preference number: 2 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRGGLNV*QASHFG
Trigger: TCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCC...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTGAGCCAGATGCTGACTaGGAAGTGAATCCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTEPDAD*EVNPSF
Trigger: GAAAGAAGGATTCACTTCCCAGTCAGCATCTGGCTC...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR GCA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGTTCGATGGTAGCAACTaGCAATTTTCCAAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAEFDGSN*QFSKKF
Trigger: AAACTTTTTGGAAAATTGGCAGTTGCTACCATCGAA...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR GCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACACGGCTATTCGTCCATaGCTGACATTTATAAAAGCA +
Preference number: 2 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHTAIRP*LTFIKA
Trigger: TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGT...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR GCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACGGCTATTCGTCCATaGCTGACATTTATAAAAGCA +
Preference number: 2 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTTAIRP*LTFIKA
Trigger: TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGT...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR GCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCGTGATGTTTCTAAGTaGTCAGTAAGTACCAATCTA +
Preference number: 2 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLRDVSK*SVSTNL
Trigger: TAGATTGGTACTTACTGAGCACTTAGAAACATCACG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGTTGTTTTCCAACTATaGGCTCCATTCAGACTTCAG +
Preference number: 2 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFVVFQL*APFRLQ
Trigger: CTGAAGTCTGAATGGAGCCCATAGTTGGAAAACAAC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTCCAGATAAAAACGTaGTTCCCCCATATTGTCTAC +
Preference number: 2 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSFQIKT*FPHIVY
Trigger: GTAGACAATATGGGGGAACCACGTTTTTATCTGGAA...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 90 bp TACCAGCTTTACTTCAGGAAGGCTCGTGGAGAAGCTGTGATCACATaGTGGTTATTTAGATACTTCCAAATGGAAATGGCATTGATAACT +
Preference number: 2 (lower is better)
Translates to: YQLYFRKARGEAVIT*WLFRYFQMEMALIT
Trigger: AGTTATCAATGCCATTTCCATTTGGAAGTATCTAAATAACCACAATGTGATCACAGCTTCTCCACGAGCCTTCCTGAAGTAAAGCTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 90 bp TCTGATGGCAATGTAGTCCTCATTTACAAATTTTACTTAATCTTCTaGCTGCTGCTTACAAATCAGCTTGCTTTAAATGGGGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: SDGNVVLIYKFYLIF*LLLTNQLALNGAPS
Trigger: GGAGGGTGCCCCATTTAAAGCAAGCTGATTTGTAAGCAGCAGCAAGAAGATTAAGTAAAATTTGTAAATGAGGACTACATTGCCATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR TCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCAGAATTGTCATTTTTaGGGAGGACTCAATGTTTGG +
Preference number: 2 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTQNCHF*GGLNVW
Trigger: CCAAACATTGAGTCCTCCTCAAAAATGACAATTCTG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR GCA 72 bp CACCCACCCCCGGTGCCTTCTCCTACCACCCCAGCCTaGTTTCCACCGCGACTTCCTGTCCTGGGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: HPPPVPSPTTPA*FPPRLPVLGLH
Trigger: GTGGAGACCCAGGACAGGAAGTCGCGGTGGAAAGCAGGCTGGGGTGGTAGGAGAAGGCACCGGGGGTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TCCGTGTGTGGCACAGGGCATGCCTCGCCTCTTGGCTaGGCGTGGCTTACTAACTGGACCCCCACCCTGGGG +
Preference number: 3 (lower is better)
Translates to: SVCGTGHASPLG*AWLTNWTPTLG
Trigger: CCCCAGGGTGGGGGTCCAGTTAGTAAGCCACGCGCAGCCAAGAGGCGAGGCATGCCCTGTGCCACACACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp CTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTaGAGGGATCCTCCGGCCATGCGGCCGGTGAGAGGC +
Preference number: 3 (lower is better)
Translates to: LGKGSGCWSPKR*RDPPAMRPVRG
Trigger: GCCTCTCACCGGCCGCATGGCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TGTGGCACAGGGCATGCCTCGCCTCTTGGCTGCGCGTaGCTTACTAACTGGACCCCCACCCTGGGGAGCATG +
Preference number: 3 (lower is better)
Translates to: CGTGHASPLGCA*LTNWTPTLGSM
Trigger: CATGCTCCCCAGGGTGGGGGTCCAGTTAGTAAGCCACGCGCAGCCAAGAGGCGAGGCATGCCCTGTGCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp GACACAGTGGAAAGCTGCTCGCCTAGTTCTGCCTCCTaGCCACTCTGGTGCGTCCTCCTCCTGTGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: DTVESCSPSSAS*PLWCVLLLWPC
Trigger: GCAGGGCCACAGGAGGAGGACGCACCAGAGTGGTCAGGAGGCAGAACTAGGCGAGCAGCTTTCCACTGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp GAGGGTCTGAGCCACGTTCCTCCTCACTCCTGCTTCTaGCTGTCTCCCATGCTTCCCCTCATGGCCCGGTGT +
Preference number: 3 (lower is better)
Translates to: EGLSHVPPHSCF*LSPMLPLMARC
Trigger: ACACCGGGCCATGAGGGGAAGCATGGGAGACAGGCAGAAGCAGGAGTGAGGAGGAACGTGGCTCAGACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CGTGGCTTACTAACTGGACCCCCACCCTGGGGAGCATaGCCGCTGCTGGCATGTTTGCACTTTGGCTGCACC +
Preference number: 3 (lower is better)
Translates to: RGLLTGPPPWGA*PLLACLHFGCT
Trigger: GGTGCAGCCAAAGTGCAAACATGCCAGCAGCGGCCATGCTCCCCAGGGTGGGGGTCCAGTTAGTAAGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp CACAGGAGGGTGGTCTCCCATGTCCTCAGTCCCTTGTaGGGTCATCCTCCCGCAGACCCCTTGGTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: HRRVVSHVLSPL*GHPPADPLVSL
Trigger: AAGGGACACCAAGGGGTCTGCGGGAGGATGACCTCACAAGGGACTGAGGACATGGGAGACCACCCTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp GGCTGCTCACCTGAGGGGCCCTCCCCCAGCATCCAGTaGGGAATTAATCGCACTCCTGGGCAAAGGATCTGG +
Preference number: 3 (lower is better)
Translates to: GCSPEGPSPSIQ*GINRTPGQRIW
Trigger: CCAGATCCTTTGCCCAGGAGTGCGATTAATTCCTCACTGGATGCTGGGGGAGGGCCCCTCAGGTGAGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp ATCAGTGCACACCCCCAGCCACACAACCGCCAGACCTaGCACCCCGAGCCGAGAAACACCGCGATATCATCA +
Preference number: 3 (lower is better)
Translates to: ISAHPQPHNRQT*HPEPRNTAISS
Trigger: TGATGATATCGCGGTGTTTCTCGGCTCGGGGTGGCAGGTCTGGCGGTTGTGTGGCTGGGGGTGTGCACTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp ACTCCTGCTTCTGCCTGTCTCCCATGCTTCCCCTCATaGCCCGGTGTGGTCTGCTGGGCCTCTCCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: TPASACLPCFPS*PGVVCWASPSF
Trigger: GAAAGAAGGAGAGGCCCAGCAGACCACACCGGGCCATGAGGGGAAGCATGGGAGACAGGCAGAAGCAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CCCCCGCCCATCTTCGCCTTTGCCATGGAGACACAGTaGAAAGCTGCTCGCCTAGTTCTGCCTCCTGACCAC +
Preference number: 3 (lower is better)
Translates to: PPPIFAFAMETQ*KAARLVLPPDH
Trigger: GTGGTCAGGAGGCAGAACTAGGCGAGCAGCTTTCCACTGTGTCTCCATGGCAAAGGCGAAGATGGGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CCACACCAGCTGGAGGAGATGAAGGAGGAGTTTTCCTaGGGCCTTCAGAGAAAGCCCGGCCCTACTGGCACC +
Preference number: 3 (lower is better)
Translates to: PHQLEEMKEEFS*GLQRKPGPTGT
Trigger: GGTGCCAGTAGGGCCGGGCTTTCTCTGAAGGCCCCAGGAAAACTCCTCCTTCATCTCCTCCAGCTGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp ACAGTAGAGGGTCTGAGCCACGTTCCTCCTCACTCCTaGTTCTGCCTGTCTCCCATGCTTCCCCTCATGGCC +
Preference number: 3 (lower is better)
Translates to: TVEGLSHVPPHS*FCLSPMLPLMA
Trigger: GGCCATGAGGGGAAGCATGGGAGACAGGCAGAAGCAGGAGTGAGGAGGAACGTGGCTCAGACCCTCTACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TGCCCTGGTCAGCACAGCGCCCCAGCTTCACATTTATaGCCAACTGTTGGACCACTGCCCAAGAGTTGCCCC +
Preference number: 3 (lower is better)
Translates to: CPGQHSAPASHL*PTVGPLPKSCP
Trigger: GGGGCAACTCTTGGGCAGTGGTCCAACAGTTGGCCATAAATGTGAAGCTGGGGCGCTGTGCTGACCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TGCAGGCCACCCACAGGGAGCTCCACGGCTTTGCCATaGCACACAATGTCTGCAGACAGGGTCTTCACCACA +
Preference number: 3 (lower is better)
Translates to: CRPPTGSSTALP*HTMSADRVFTT
Trigger: TGTGGTGAAGACCCTGTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGAGCTCCCTGTGGGTGGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp AGGGAGCTCCACGGCTTTGCCATGGCACACAATGTCTaGAGACAGGGTCTTCACCACATCCGCCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: RELHGFAMAHNV*RQGLHHIRLLQ
Trigger: CTGGAGAAGGCGGATGTGGTGAAGACCCTGTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGAGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp ACCTTTGCAGGCCACCCACAGGGAGCTCCACGGCTTTaGCATGGCACACAATGTCTGCAGACAGGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: TFAGHPQGAPRL*HGTQCLQTGSS
Trigger: TGAAGACCCTGTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGAGCTCCCTGTGGGTGGCCTGCAAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp GGAGCATGGCCGCTGCTGGCATGTTTGCACTTTGGCTaGACCACGTATGCTGTGTCTGCCAGTGTCTGTGAC +
Preference number: 3 (lower is better)
Translates to: GAWPLLACLHFG*TTYAVSASVCD
Trigger: GTCACAGACACTGGCAGACACAGCATACGTGGTGCAGCCAAAGTGCAAACATGCCAGCAGCGGCCATGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp GAAAGGAGACCCCACGTCTCACATCCCAGAAGACATTaGCCAGCCCAGCAGCTCACGGCTGAAGATGACATG +
Preference number: 3 (lower is better)
Translates to: ERRPHVSHPRRH*PAQQLTAEDDM
Trigger: CATGTCATCTTCAGCCGTGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGTGAGACGTGGGGTCTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp CTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTaGCCCCGCCCATCTTCGCCTTTGCCATGGAGACAC +
Preference number: 3 (lower is better)
Translates to: LPKTFKPANPTL*PRPSSPLPWRH
Trigger: GTGTCTCCATGGCAAAGGCGAAGATGGGCGGGGGCAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CTCCTTAACACAGGACAGAGTCAAGCCTGGGCCCTCTaGTGTATTCTACCCACAGGAGGGTGGTCTCCCATG +
Preference number: 3 (lower is better)
Translates to: LLNTGQSQAWAL*CILPTGGWSPM
Trigger: CATGGGAGACCACCCTCCTGTGGGTAGAATACACCAGAGGGCCCAGGCTTGACTCTGTCCTGTGTTAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAACCTTTGGGATCTTACTaGCATTTCAAAGACACAGGC +
Preference number: 3 (lower is better)
Translates to: HLRGLADPGETAHPRVSQPLGSY*HFKDTG
Trigger: GCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAGG...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp AGTGGCAGGCATCACTGGAAGTCACTGAGACACACATaGCACTTCTCGGAATCCACAATGCTGGGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: SGRHHWKSLRHT*HFSESTMLGSG
Trigger: CCCAGAGCCCAGCATTGTGGATTCCGAGAAGTGGCATGTGTGTCTCAGTGACTTCCAGTGATGCCTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CTCCCATGCTTCCCCTCATGGCCCGGTGTGGTCTGCTaGGCCTCTCCTTCTTTCATTTCTGTAGGAATTGTG +
Preference number: 3 (lower is better)
Translates to: LPCFPSWPGVVC*ASPSFISVGIV
Trigger: CACAATTCCTACAGAAATGAAAGAAGGAGAGGCCCAGCAGACCACACCGGGCCATGAGGGGAAGCATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TGTCTCCCATGCTTCCCCTCATGGCCCGGTGTGGTCTaGTGGGCCTCTCCTTCTTTCATTTCTGTAGGAATT +
Preference number: 3 (lower is better)
Translates to: CLPCFPSWPGVV*WASPSFISVGI
Trigger: AATTCCTACAGAAATGAAAGAAGGAGAGGCCCAGCAGACCACACCGGGCCATGAGGGGAAGCATGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp CCACGAGTCTCTACTTATCCTTTACTGAACTATCAGTaGACACCCCCAGCCACACAACCGCCAGACCTGCCA +
Preference number: 3 (lower is better)
Translates to: PRVSTYPLLNYQ*TPPATQPPDLP
Trigger: TGGCAGGTCTGGCGGTTGTGTGGCTGGGGGTGTGCACTGATAGTTCAGTAAAGGATAAGTAGAGACTCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp ATGTGGCCAAAGTTAGGCAGTCGTCTTAACGCTGGATaGCCTGGTCAGCACAGCGCCCCAGCTTCACATTTA +
Preference number: 3 (lower is better)
Translates to: MWPKLGSRLNAG*PGQHSAPASHL
Trigger: TAAATGTGAAGCTGGGGCGCTGTGCTGACCAGGGCATCCAGCGTTAAGACGACTGCCTAACTTTGGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TGTCCCATTAAGTGTCTACTTGCACAGCTTCTTGGCTaGCGTTTGCCTTCTGCCCTGAGGGGCACATACACC +
Preference number: 3 (lower is better)
Translates to: CPIKCLLAQLLG*RLPSALRGTYT
Trigger: GGTGTATGTGCCCCTCAGGGCAGAAGGCAAACGGCAGCCAAGAAGCTGTGCAAGTAGACACTTAATGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CTGAATTCCCTACCTGGACATACCTACTTTCTTGGCTaGTGGTCTCAGGGCAATGACGGTAGCTCCCTCCAC +
Preference number: 3 (lower is better)
Translates to: LNSLPGHTYFLG*WSQGNDGSSLH
Trigger: GTGGAGGGAGCTACCGTCATTGCCCTGAGACCACCAGCCAAGAAAGTAGGTATGTCCAGGTAGGGAATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp GGGGCCTTCAGAGAAAGCCCGGCCCTACTGGCACCTTaGCTTTGGATTTCTAATGTCCAGAAATGTGAGCGA +
Preference number: 3 (lower is better)
Translates to: GAFRESPALLAP*LWISNVQKCER
Trigger: TCGCTCACATTTCTGGACATTAGAAATCCAAAGCCAAGGTGCCAGTAGGGCCGGGCTTTCTCTGAAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGGTTTATGTCCCCAACTaGGGGGAGTGCAATGGTGGC +
Preference number: 3 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLVYVPN*GECNGG
Trigger: GCCACCATTGCACTCCCCCAAGTTGGGGACATAAAC...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGCGCCCATCTTCGCCTTaGCCATGGAGACACAGTGGA +
Preference number: 3 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAERPSSP*PWRHSG
Trigger: TCCACTGTGTCTCCATGGCAAAGGCGAAGATGGGCG...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp AGGTTGAGGCAGGACAATCCTTTGAACCCAAGAGGTTaGGGCTGCAGTGAGCTATGCTTGTACCACTGCCCT +
Preference number: 3 (lower is better)
Translates to: RLRQDNPLNPRG*GCSELCLYHCP
Trigger: AGGGCAGTGGTACAAGCATAGCTCACTGCAGCCTCAACCTCTTGGGTTCAAAGGATTGTCCTGCCTCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp AGACCAGCCAGTCTTAGCTATTTCCCTGCCCTTTCCTaGAGAACATACAGTAGAGGGTCTGAGCCACGTTCC +
Preference number: 3 (lower is better)
Translates to: RPASLSYFPALS*RTYSRGSEPRS
Trigger: GGAACGTGGCTCAGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGCTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp GGTGAGCCAATTCTTAGATACAGCAAAGGGCTACCCTaGGAGCAAAGTGACCAATCCAGAGCCCATCCTCCT +
Preference number: 3 (lower is better)
Translates to: GEPILRYSKGLP*EQSDQSRAHPP
Trigger: AGGAGGATGGGCTCTGGATTGGTCACTTTGCTCCCAGGGTAGCCCTTTGCTGTATCTAAGAATTGGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CAGGTCTTGCCAGGACACTCCTTCATCTCTTCAGAGTaGCAGGCATCACTGGAAGTCACTGAGACACACATG +
Preference number: 3 (lower is better)
Translates to: QVLPGHSFISSE*QASLEVTETHM
Trigger: CATGTGTGTCTCAGTGACTTCCAGTGATGCCTGCCACTCTGAAGAGATGAAGGAGTGTCCTGGCAAGACCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TCAGCCTCATGCTACCCTATTAAAGCAGTAAATGGCTaGATGCCTACTGGGCTCTCCTGGACACAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: SASCYPIKAVNG*MPTGLSWTQRL
Trigger: GAGCCTCTGTGTCCAGGAGAGCCCAGTAGGCATCCAGCCATTTACTGCTTTAATAGGGTAGCATGAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp AATTCCCTACCTGGACATACCTACTTTCTTGGCTGGTaGTCTCAGGGCAATGACGGTAGCTCCCTCCACAAG +
Preference number: 3 (lower is better)
Translates to: NSLPGHTYFLGW*SQGNDGSSLHK
Trigger: CTTGTGGAGGGAGCTACCGTCATTGCCCTGAGACCACCAGCCAAGAAAGTAGGTATGTCCAGGTAGGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGTGGGTAAGGACTAGTTaGGGCTCCTGCACTGAACAA +
Preference number: 3 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLWVRTS*GSCTEQ
Trigger: TTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCA...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCCGATACGGGACCCACTaGAGCCTAAACTTCCACCAA +
Preference number: 3 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIRYGTH*SLNFHQ
Trigger: TTGGTGGAAGTTTAGGCTCAAGTGGGTCCCGTATCG...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp CATTTATGGCCAACTGTTGGACCACTGCCCAAGAGTTaGCCCCTTCAGGATGAAAAACTCTGGGACTCTTCC +
Preference number: 3 (lower is better)
Translates to: HLWPTVGPLPKS*PLQDEKLWDSS
Trigger: GGAAGAGTCCCAGAGTTTTTCATCCTGAAGGGGGCAACTCTTGGGCAGTGGTCCAACAGTTGGCCATAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp CCTGGAGTCTCTGGCCCACTTAGGATGGACATAAGGTaGCTAAGGGCTTTGGATGCAAGAAACTATCCCTCT +
Preference number: 3 (lower is better)
Translates to: PGVSGPLRMDIR*LRALDARNYPS
Trigger: AGAGGGATAGTTTCTTGCATCCAAAGCCCTTAGGCACCTTATGTCCATCCTAAGTGGGCCAGAGACTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TATAAATCTTGCATCTTATCCCCACCCCATCAGGGCTaGAGCCCAGAGAGAGAACACATTCTCTCCTGGACC +
Preference number: 3 (lower is better)
Translates to: YKSCILSPPHQG*SPEREHILSWT
Trigger: GGTCCAGGAGAGAATGTGTTCTCTCTCTGGGCTCCAGCCCTGATGGGGTGGGGATAAGATGCAAGATTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp GTTTTCCTGGGGCCTTCAGAGAAAGCCCGGCCCTACTaGCACCTTGGCTTTGGATTTCTAATGTCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: VFLGPSEKARPY*HLGFGFLMSRN
Trigger: ATTTCTGGACATTAGAAATCCAAAGCCAAGGTGCCAGTAGGGCCGGGCTTTCTCTGAAGGCCCCAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTAGGAGGACTCAATGTTaGGCAAGCGTCCCATTTTGG +
Preference number: 3 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSRRTQC*ASVPFW
Trigger: CCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp ATAGAATCAGAATGTGGCCTTTGGGAAGGACGATGTTaGAGGGGAAGAACTCCTTCCACTGAATGCCGCTGC +
Preference number: 3 (lower is better)
Translates to: IESECGLWEGRC*RGRTPSTECRC
Trigger: GCAGCGGCATTCAGTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp AGAATGTCCACCTTACAGACGAGGAAGCCAACCAAATaGACCAGCTGGTTGGGCCAGAGAGAACATATGAGT +
Preference number: 3 (lower is better)
Translates to: RMSTLQTRKPTK*TSWLGQREHMS
Trigger: ACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGGCTTCCTCGTCTGTAAGGTGGACATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp ACCCTGACCCGGTTCCTGATGCGTGATGTTTCTAAGTaGTCAGTAAGTACCAATCTACTCCCACACTGCAGT +
Preference number: 3 (lower is better)
Translates to: TLTRFLMRDVSK*SVSTNLLPHCS
Trigger: ACTGCAGTGTGGGAGTAGATTGGTACTTACTGAGCACTTAGAAACATCACGCATCAGGAACCGGGTCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATaGAAAGGATCTATCCATAGAGACCAGTGGCTTGAG +
Preference number: 3 (lower is better)
Translates to: CSCCDSFLNPVG*KGSIHRDQWLE
Trigger: CTCAAGCCACTGGTCTCTATGGATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp AGCAAAACTTGCAGCTGTGATGTGGTCGTGACCCTCTaGTTAAGAATGTCCACCTTACAGACGAGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: SKTCSCDVVVTL*LRMSTLQTRKP
Trigger: TGGCTTCCTCGTCTGTAAGGTGGACATTCTTAACCAGAGGGTCACGACCACATCACAGCTGCAAGTTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TCAGTAAGTACCAATCTACTCCCACACTGCAGTATGTaGGCGTGTGATGCTGAACAGAGAGAGCACGATGTG +
Preference number: 3 (lower is better)
Translates to: SVSTNLLPHCSM*ACDAEQREHDV
Trigger: CACATCGTGCTCTCTCTGTTCAGCATCACACGCCCACATACTGCAGTGTGGGAGTAGATTGGTACTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp ACTCATGACAGTAAACTTCCTCAGGGTTCTCTATTATaGTCAGGGCCAATCCTTCACCTCGAGGGCTGTCGT +
Preference number: 3 (lower is better)
Translates to: THDSKLPQGSLL*SGPILHLEGCR
Trigger: ACGACAGCCCTCGAGGTGAAGGATTGGCCCTGATCATAATAGAGAACCCTGAGGAAGTTTACTGTCATGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp CACGGGCTTTCAGAAAGCTGCCTTTGGGATCTTACTTaGATTTCAAAGACACAGGCAGGTTTGGGCGATGAA +
Preference number: 3 (lower is better)
Translates to: HGLSESCLWDLT*ISKTQAGLGDE
Trigger: TTCATCGCCCAAACCTGCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAGGCAGCTTTCTGAAAGCCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp ACCTTACAGACGAGGAAGCCAACCAAATGCACCAGCTaGTTGGGCCAGAGAGAACATATGAGTATCTCAGAT +
Preference number: 3 (lower is better)
Translates to: TLQTRKPTKCTS*LGQREHMSISD
Trigger: ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGGCTTCCTCGTCTGTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp ACTAATGCTGATACATGCCCTGCTTCTGCCGAAACATaGCCCCCTACACTCCCATGTCTAAATGGAAACTCT +
Preference number: 3 (lower is better)
Translates to: TNADTCPASAET*PPTLPCLNGNS
Trigger: AGAGTTTCCATTTAGACATGGGAGTGTAGGGGGCCATGTTTCGGCAGAAGCAGGGCATGTATCAGCATTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACGGCAAGCGTCCCATTTaGGAACCTCATCCACAAGCA +
Preference number: 3 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYGKRPI*EPHPQA
Trigger: TGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCC...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CAA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGGGCAAGCGTCCCATTTaGGAACCTCATCCACAAGCA +
Preference number: 3 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLGKRPI*EPHPQA
Trigger: TGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCC...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CAA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGCCGTGGGAGATAACTTaGTCCCAGATATTAAAACCT +
Preference number: 3 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAEPWEIT*SQILKP
Trigger: AGGTTTTAATATCTGGGACAAAGTTATCTCCCACGG...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp CATCCAGAGCGGGCTTCCCTGGGAATTAGTTTTTGGTaGACAATAGAATCAGAATGTGGCCTTTGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: HPERASLGISFW*TIESECGLWEG
Trigger: TCCTTCCCAAAGGCCACATTCTGATTCTATTGTTCACCAAAAACTAATTCCCAGGGAAGCCCGCTCTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp AGAGGGTACAGATGGCATTGCCAACCCTCATATAAATaGTGGAGCCCAAGAGAATGTTGCTGCTTCCCATCT +
Preference number: 3 (lower is better)
Translates to: RGYRWHCQPSYK*WSPRECCCFPS
Trigger: AGATGGGAAGCAGCAACATTCTCTTGGGCTCCATCATTTATATGAGGGTTGGCAATGCCATCTGTACCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp GGTCTTCACCACATCCGCCTTCTCCAGGAGCACAAATaGGGAAACTCATTGTCACACTCATTAAGGACATAC +
Preference number: 3 (lower is better)
Translates to: GLHHIRLLQEHK*GNSLSHSLRTY
Trigger: GTATGTCCTTAATGAGTGTGACAATGAGTTTCCTCATTTGTGCTCCTGGAGAAGGCGGATGTGGTGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp GAGAACAGTCAACGCTGTCAATGGCATCCACCTTTCTaGGTCCTCAATCAGTTACTTTTATCAGACCTGGGT +
Preference number: 3 (lower is better)
Translates to: ENSQRCQWHPPF*VLNQLLLSDLG
Trigger: ACCCAGGTCTGATAAAAGTAACTGATTGAGGACGCAGAAAGGTGGATGCCATTGACAGCGTTGACTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TGGTCTCCTCAAACAACTCCATTTCAAATTCTGGTCTaGAAACAGACCCCGAAATGGGCCTCTATCTTGCAC +
Preference number: 3 (lower is better)
Translates to: WSPQTTPFQILV*KQTPKWASILH
Trigger: GTGCAAGATAGAGGCCCATTTCGGGGTCTGTTTGCAGACCAGAATTTGAAATGGAGTTGTTTGAGGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp GGCTTTGGATGCAAGAAACTATCCCTCTCAGCCTCATaGTACCCTATTAAAGCAGTAAATGGCTGGATGCCT +
Preference number: 3 (lower is better)
Translates to: GFGCKKLSLSAS*YPIKAVNGWMP
Trigger: AGGCATCCAGCCATTTACTGCTTTAATAGGGTAGCATGAGGCTGAGAGGGATAGTTTCTTGCATCCAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp AGACCTGGGTGCAAATTCGAGTTTATGTCCCCAACTTaGGGGAGTGCAATGGTGGCACTTCAATTTCTTCAT +
Preference number: 3 (lower is better)
Translates to: RPGCKFEFMSPT*GSAMVALQFLH
Trigger: ATGAAGAAATTGAAGTGCCACCATTGCACTCCCCCAAGTTGGGGACATAAACTCGAATTTGCACCCAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CCATTTCAAATTCTGGTCTGCAAACAGACCCCGAAATaGGCCTCTATCTTGCACCACAAACCTGAATCTCTC +
Preference number: 3 (lower is better)
Translates to: PFQILVCKQTPK*ASILHHKPESL
Trigger: GAGAGATTCAGGTTTGTGGTGCAAGATAGAGGCCCATTTCGGGGTCTGTTTGCAGACCAGAATTTGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TTCAGAGAAAGCCCGGCCCTACTGGCACCTTGGCTTTaGATTTCTAATGTCCAGAAATGTGAGCGAAGAAAA +
Preference number: 3 (lower is better)
Translates to: FRESPALLAPWL*ISNVQKCERRK
Trigger: TTTTCTTCGCTCACATTTCTGGACATTAGAAATCCAAAGCCAAGGTGCCAGTAGGGCCGGGCTTTCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTaGAACCTCATCCACAAGCACTTGATGAAGCACAAT +
Preference number: 3 (lower is better)
Translates to: LRRTQCLASVPF*NLIHKHLMKHN
Trigger: ATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CCA 72 bp ACTTTCAATTCTGAAGATGAGGACACACACGGGGGATaGGATAAGCTAAAAATGCCACGGGCTTTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: TFNSEDEDTHGG*DKLKMPRAFRK
Trigger: CTTTCTGAAAGCCCGTGGCATTTTTAGCTTATCCCATCCCCCGTGTGTGTCCTCATCTTCAGAATTGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TCGAGTTTATGTCCCCAACTTGGGGGAGTGCAATGGTaGCACTTCAATTTCTTCATTATCTGTGCTCACCTA +
Preference number: 3 (lower is better)
Translates to: SSLCPQLGGVQW*HFNFFIICAHL
Trigger: TAGGTGAGCACAGATAATGAAGAAATTGAAGTGCCACCATTGCACTCCCCCAAGTTGGGGACATAAACTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp CACAATGGTCTCCTCAAACAACTCCATTTCAAATTCTaGTCTGCAAACAGACCCCGAAATGGGCCTCTATCT +
Preference number: 3 (lower is better)
Translates to: HNGLLKQLHFKF*SANRPRNGPLS
Trigger: AGATAGAGGCCCATTTCGGGGTCTGTTTGCAGACCAGAATTTGAAATGGAGTTGTTTGAGGAGACCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGACGAGAGCATGCCTATaGGAGCACTTTCAGTACAAT +
Preference number: 3 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLTRACL*EHFQYN
Trigger: ATTGTACTGAAAGTGCTCCAATAGGCATGCTCTCGT...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAAAAGACACAGGCAGGTTaGGGCGATGAATGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKKTQAG*GDEWKN
Trigger: ATTTTTCCATTCATCGCCCAAACCTGCCTGTGTCTT...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp TTGGAACCTCATCCACAAGCACTTGATGAAGCACAATaGATGGACGGCTATTCGTCCATGCCTGACATTTAT +
Preference number: 3 (lower is better)
Translates to: LEPHPQALDEAQ*MDGYSSMPDIY
Trigger: ATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR TCA 72 bp AAGGTCAGATCCCACCAGACACAGAATTGTCATTTTTaGGGAGGACTCAATGTTTGGCAAGCGTCCCATTTT +
Preference number: 3 (lower is better)
Translates to: KVRSHQTQNCHF*GGLNVWQASHF
Trigger: AAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGGGATCTGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR TCA 72 bp GGGTATAATTGTATAATTGGATGCACTGGGTCCCTCTaGATTCCCTACCTGGACATACCTACTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: GYNCIIGCTGSL*IPYLDIPTFLA
Trigger: AGCCAAGAAAGTAGGTATGTCCAGGTAGGGAATTCAGAGGGACCCAGTGCATCCAATTATACAATTATACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp GCTACTACTTCTTGGGTAAGGACTAGTTTGGGCTCCTaGACTGAACAATGGTGTGATTATTCGATTTCACAG +
Preference number: 3 (lower is better)
Translates to: ATTSWVRTSLGS*TEQWCDYSISQ
Trigger: CTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCAAGAAGTAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR GCA 72 bp GTGCAAATTCGAGTTTATGTCCCCAACTTGGGGGAGTaGAATGGTGGCACTTCAATTTCTTCATTATCTGTG +
Preference number: 3 (lower is better)
Translates to: VQIRVYVPNLGE*NGGTSISSLSV
Trigger: CACAGATAATGAAGAAATTGAAGTGCCACCATTGCACTCCCCCAAGTTGGGGACATAAACTCGAATTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp CTCACAGAAATGACAGCCGCCAAAAGGTTTAAATGTTaGTTTAAGAGCCTTGCAGCTGTTGTGACTCATTCC +
Preference number: 3 (lower is better)
Translates to: LTEMTAAKRFKC*FKSLAAVVTHS
Trigger: GGAATGAGTCACAACAGCTGCAAGGCTCTTAAAGCAACATTTAAACCTTTTGGCGGCTGTCATTTCTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TGGGTAAGGACTAGTTTGGGCTCCTGCACTGAACAATaGTGTGATTATTCGATTTCACAGACAACTTCACAG +
Preference number: 3 (lower is better)
Translates to: WVRTSLGSCTEQ*CDYSISQTTSQ
Trigger: CTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CCA 72 bp TTCTGTAGGAATTGTGAGAACAGTCAACGCTGTCAATaGCATCCACCTTTCTGCGTCCTCAATCAGTTACTT +
Preference number: 3 (lower is better)
Translates to: FCRNCENSQRCQ*HPPFCVLNQLL
Trigger: AAGTAACTGATTGAGGACGCAGAAAGGTGGATGCCATTGACAGCGTTGACTGTTCTCACAATTCCTACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCTCATCCACAAGCACTaGATGAAGCACAATGAATGG +
Preference number: 3 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTLIHKH*MKHNEW
Trigger: CCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CAA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTACTCATCCACAAGCACTaGATGAAGCACAATGAATGG +
Preference number: 3 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLLIHKH*MKHNEW
Trigger: CCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR-3UTR CAA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACACCACCAGACACAGAATaGTCATTTTTGAGGAGGACT +
Preference number: 3 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTPPDTE*SFLRRT
Trigger: AGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGG...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR TCA 72 bp ACCAGCTTTACTTCAGGAAGGCTCGTGGAGAAGCTGTaGTCACATTGTGGTTATTTAGATACTTCCAAATGG +
Preference number: 3 (lower is better)
Translates to: TSFTSGRLVEKL*SHCGYLDTSKW
Trigger: CCATTTGGAAGTATCTAAATAACCACAATGTGATCACAGCTTCTCCACGAGCCTTCCTGAAGTAAAGCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp ACAGAAGGCCAGATGAGTGACCTGTATCACAGGATATaGCAACACATCACCTATCTCCAAACAAGAAAAAGC +
Preference number: 3 (lower is better)
Translates to: TEGQMSDLYHRI*QHITYLQTRKS
Trigger: GCTTTTTCTTGTTTGGAGATAGGTGATGTGTTGTCATATCCTGTGATACAGGTCACTCATCTGGCCTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACAGCCTAAGCGTAGTTTaGGTTAGCCTGTGTTCTAAG +
Preference number: 3 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHSLSVV*VSLCSK
Trigger: CTTAGAACACAGGCTAACCAAAACTACGCTTAGGCT...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR TCA 72 bp CCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATaGGTATCTCAGATTCAGTTATTCCAATCAATATCA +
Preference number: 3 (lower is better)
Translates to: PNAPAGWARENI*VSQIQLFQSIS
Trigger: TGATATTGATTGGAATAACTGAATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR TCA 72 bp CAAACTTTTCTTTCAATGACAGCAGCCTCTCCTTTATaGATTAAACGTGGGTACATTTCGATACCACGGGCA +
Preference number: 3 (lower is better)
Translates to: QTFLSMTAASPL*IKRGYISIPRA
Trigger: TGCCCGTGGTATCGAAATGTACCCACGTTTAATTCATAAAGGAGAGGCTGCTGTCATTGAAAGAAAAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp ACAAGTGTGCCTCATGGTGGATTACTACAACCTTATTaGTGCAGTCCCATCCATTACCCAATTTCCATTATT +
Preference number: 3 (lower is better)
Translates to: TSVPHGGLLQPY*CSPIHYPISII
Trigger: AATAATGGAAATTGGGTAATGGATGGGACTGCAGCAATAAGGTTGTAGTAATCCACCATGAGGCACACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp AACCTCATCCACAAGCACTTGATGAAGCACAATGAATaGACGGCTATTCGTCCATGCCTGACATTTATAAAA +
Preference number: 3 (lower is better)
Translates to: NLIHKHLMKHNE*TAIRPCLTFIK
Trigger: TTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CCA 72 bp GGGATCTTACTTGCATTTCAAAGACACAGGCAGGTTTaGGCGATGAATGGAAAAATACAGAACAGCATGTAT +
Preference number: 3 (lower is better)
Translates to: GILLAFQRHRQV*AMNGKIQNSMY
Trigger: ATACATGCTGTTCTGTATTTTTCCATTCATCGCCCAAACCTGCCTGTGTCTTTGAAATGCAAGTAAGATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTACAGAATTGTCATTTTaGAGGAGGACTCAATGTTTG +
Preference number: 3 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRTELSF*RRTQCL
Trigger: CAAACATTGAGTCCTCCTCAAAAATGACAATTCTGT...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR TCA 72 bp GGATTTCTAATGTCCAGAAATGTGAGCGAAGAAAACTaGTTTATTGTGAAAAGCCGTCAGTCTGTGGTGATG +
Preference number: 3 (lower is better)
Translates to: GFLMSRNVSEEN*FIVKSRQSVVM
Trigger: CATCACCACAGACTGACGGCTTTTCACAATAAATCAGTTTTCTTCGCTCACATTTCTGGACATTAGAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TTACTTAATCTTCTTGCTGCTGCTTACAAATCAGCTTaGTTTAAATGGGGCACCCTCCATAAACAACCTCTA +
Preference number: 3 (lower is better)
Translates to: LLNLLAAAYKSA*FKWGTLHKQPL
Trigger: TAGAGGTTGTTTATGGAGGGTGCCCCATTTAAAGCAAGCTGATTTGTAAGCAGCAGCAAGAAGATTAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR-3UTR CAA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACACAGAATTGTCATTTTaGAGGAGGACTCAATGTTTG +
Preference number: 3 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHTELSF*RRTQCL
Trigger: CAAACATTGAGTCCTCCTCAAAAATGACAATTCTGT...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR TCA 72 bp AAGATAATTTTAGGTTGGTGTTGGAGAAAAACTTACTaGATATTTACATCCCATACCGGCCATCCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: KIILGWCWRKTY*IFTSHTGHPPF
Trigger: GAAGGGAGGATGGCCGGTATGGGATGTAAATATTCAGTAAGTTTTTCTCCAACACCAACCTAAAATTATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TCTCAGATTCAGTTATTCCAATCAATATCACCAACGTaGATTACAGGATGGAAGTCATACTACTGTCCTTTA +
Preference number: 3 (lower is better)
Translates to: SQIQLFQSISPT*ITGWKSYYCPL
Trigger: TAAAGGACAGTAGTATGACTTCCATCCTGTAATGCACGTTGGTGATATTGATTGGAATAACTGAATCTGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp TTCCTCCTTTCTACTCTCAGAATAAAATGTTTTCTATaGTCTTCAGGGCAACGTATGCCCTACTCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: FLLSTLRIKCFL*SSGQRMPYSLK
Trigger: TTTTAAAGAGTAGGGCATACGTTGCCCTGAAGAGCATAGAAAACATTTTATTCTGAGAGTAGAAAGGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp TTATTCCAATCAATATCACCAACGTGCATTACAGGATaGAAGTCATACTACTGTCCTTTAACAGATAACACC +
Preference number: 3 (lower is better)
Translates to: LFQSISPTCITG*KSYYCPLTDNT
Trigger: GGTGTTATCTGTTAAAGGACAGTAGTATGACTTCCATCCTGTAATGCACGTTGGTGATATTGATTGGAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CCA 72 bp AGCATGCCTATTGGAGCACTTTCAGTACAATTAAGCTaGAATGTCCTGACATTGAATGAGAGATTACATTAT +
Preference number: 3 (lower is better)
Translates to: SMPIGALSVQLS*NVLTLNERLHY
Trigger: ATAATGTAATCTCTCATTCAATGTCAGGACATTCCAGCTTAATTGTACTGAAAGTGCTCCAATAGGCATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR GCA 72 bp ACTTTCTTATGTTTTGACATTCGTTTGATTACAACATaGAATTTACAACACCTGGGACTACAACAGGACATT +
Preference number: 3 (lower is better)
Translates to: TFLCFDIRLITT*NLQHLGLQQDI
Trigger: AATGTCCTGTTGTAGTCCCAGGTGTTGTAAATTGCATGTTGTAATCAAACGAATGTCAAAACATAAGAAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCTGGCCAGCTGAGCCTTaGGCTCCAGGGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGWPAEP*APGAAR
Trigger: CCGTGCTGCCCCTGGAGCGCAAGGCTCAGCTGGCCA...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCAGCACCCACCCCCGGTaGCTTCTCCTACCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGSTHPR*LLLPPQ
Trigger: CTGGGGTGGTAGGAGAAGGCACCGGGGGTGGGTGCT...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp CCCCCACCCTGGGGAGCATGGCCGCTGCTGGCATGTTaGCACTTTGGCTGCACCACGTATGCTGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PPPWGAWPLLAC*HFGCTTYAVSA
Trigger: GGCAGACACAGCATACGTGGTGCAGCCAAAGTGCAAACATGCCAGCAGCGGCCATGCTCCCCAGGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCGGTAACCCAGGTCGCTaGGGTAACGCAGTGACCGCG +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGGNPGR*GNAVTA
Trigger: CGCGGTCACTGCGTTACCGCAGCGACCTGGGTTACC...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAAGGGCACATACACCTTTaGAGGCCACCCACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HLRGLADPGETAHPRVSQGHIHL*RPPTGS
Trigger: GCTCCCTGTGGGTGGCCTGCAAAGGTGTATGTGCCC...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAATGGTCTCCAAAGCGCTaGAGGGATCCTCCGGCCATG +
Preference number: 4 (lower is better)
Translates to: HLRGLADPGETAHPRVSQWSPKR*RDPPAM
Trigger: CATGGCCGGAGGATCCCTGCAGCGCTTTGGAGACCA...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCACCGCGGGCGCAATCTaGGCCCCTGCCCACGCGCAG +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSITAGAI*APAHAQ
Trigger: CTGCGCGTGGGCAGGGGCTCAGATTGCGCCCGCGGT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAACAACTGTTGGACCACTaGCCAAGAGTTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HLRGLADPGETAHPRVSQQLLDH*PRVAPF
Trigger: GAAGGGGGCAACTCTTGGGCAGTGGTCCAACAGTTG...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp CACCTTTGCAGGCCACCCACAGGGAGCTCCACGGCTTaGCCATGGCACACAATGTCTGCAGACAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLCRPPTGSSTA*PWHTMSADRVF
Trigger: GAAGACCCTGTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGAGCTCCCTGTGGGTGGCCTGCAAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCTTAGGGCCTTTCGGTTaGCTCACACCTCACACAAAC +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGLGPFG*LTPHTN
Trigger: GTTTGTGTGAGGTGTGAGTCAACCGAAAGGCCCTAA...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAATCCATCTCCTCGATTTaGCTCTTCCACTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: HLRGLADPGETAHPRVSQSISSI*LFHCRR
Trigger: CCTTCTGCAGTGGAAGAGTCAAATCGAGGAGATGGA...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCTCTGAAAGCCCCGCGTaGTCAGCAGATAAACACATG +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGSESPA*SADKHM
Trigger: CATGTGTTTATCTGCTGAGCACGCGGGGCTTTCAGA...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTGGCCAGCTGAGCCTTaGGCTCCAGGGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHWPAEP*APGAAR
Trigger: CCGTGCTGCCCCTGGAGCGCAAGGCTCAGCTGGCCA...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp AAAGGAGACCCCACGTCTCACATCCCAGAAGACATTGCCCAGCCCAGCAGCTCACTCTGGCAAGCTCTATaGAGCCCTGGAGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KGDPTSHIPEDIAQPSSSLWQAL*SPGVSG
Trigger: GCCAGAGACTCCAGGGCTGCATAGAGCTTGCCAGAG...TGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGTGAGACGTGGGGTCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTACTGGACCCCCACCCTaGGGAGCATGGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSTGPPP*GAWPLL
Trigger: CAGCAGCGGCCATGCTCCCCAGGGTGGGGGTCCAGT...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCGAGGATGGCCAGCTaGGCCTTGCGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRPRMAS*ALRSRG
Trigger: GCCCCTGGAGCGCAAGGCTCAGCTGGCCATCCTCGG...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGACACGGAAACTGGAGTaGTGCAGCCGCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLTRKLE*CSRWPR
Trigger: CCTCGGCCAGCGGCTGCATCACTCCAGTTTCCGTGT...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTTCATCACCGCGGGGCTaGGACGACGCGGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRSSPRG*DDAGPE
Trigger: CTCCGGACCCGCGTCGTCGCAGCCCCGCGGTGATGA...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGAGGCCGCGGTCCGGCTaGGCCAGCCCGGCTAGCATG +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLRPRSG*ASPASM
Trigger: CATGCTAGCCGGGCTGGCGCAGCCGGACCGCGGCCT...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAAAATCTACTCCCACACTaGAGTATGTGGGCGTGTGAT +
Preference number: 4 (lower is better)
Translates to: HLRGLADPGETAHPRVSQNLLPH*SMWACD
Trigger: ATCACACGCCCACATACTGCAGTGTGGGAGTAGATT...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGACCGGGTATAGCGGCATaGACCTGTGGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRPGIAA*TCGPSY
Trigger: GTAGCTGGGACCACAGGTGCATGCCGCTATACCCGG...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAACCATCCTCCTCTATCTaGCTCTTACAACCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: HLRGLADPGETAHPRVSQPSSSI*LLQPRK
Trigger: CTTCCTAGGTTGTAAGAGCCAGATAGAGGAGGATGG...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCGCGAAAGAGCTCGGCTaGCATCTCGTAGTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIAKELG*HLVVAR
Trigger: GCGGGCGACTACGAGATGGCAGCCGAGCTCTTTCGC...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCTCCCTCTCAGCCTCATaGTACCCTATTAAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGSLSAS*YPIKAV
Trigger: TACTGCTTTAATAGGGTAGCATGAGGCTGAGAGGGA...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGACCATCTCTGTGGCGGTaGCTTAGCACTCGGAACCGA +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRPSLWR*LSTRNR
Trigger: TCGGTTCCGAGTGCTAAGCCACCGCCACAGAGATGG...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGATCAACTCCTCAACCCCTaGGGGAGGAGCACCCACCCC +
Preference number: 4 (lower is better)
Translates to: PTKCTSWLGQREHMSISDQLLNP*GRSTHP
Trigger: GGGGTGGGTGCTCCTCCCCCAGGGGTTGAGGAGTTG...ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCCTCCATTTCAAATTCTaGTCTGCAAACAGACCCCGA +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGLHFKF*SANRPR
Trigger: TCGGGGTCTGTTTGCAGACCAGAATTTGAAATGGAG...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTTCCTGTGGCCCTGCGTaGCCTGGTGCGCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSSCGPA*PGALLF
Trigger: GAAAAGGAGCGCACCAGGCCACGCAGGGCCACAGGA...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAGCTGCGGTAACGCAGTaGCCGCGCTCCAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIAAVTQ*PRSRSA
Trigger: CGCGGACCTGGAGCGCGGTCACTGCGTTACCGCAGC...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCCGAGGATGGCCAGCTaGGCCTTGCGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLPRMAS*ALRSRG
Trigger: GCCCCTGGAGCGCAAGGCTCAGCTGGCCATCCTCGG...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCGGCCATGCGGCCGGTaGGAGGCACCCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLRPCGR*EAPSSQ
Trigger: CTGTGAGGAGGGTGCCTCTCACCGGCCGCATGGCCG...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCAACACCAAGGGGTGCTTaGAGGTCCAGGCCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: MFGKRPILEPHPQALDEATPRGA*RSRPAP
Trigger: AGGGGCGGGCCTGGACCTTCAAGCACCCCTTGGTGT...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCCGGGAGCCTCACATaGCTCTCTCAGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRPGSLT*LSQPLP
Trigger: AGGGAGGGGCTGAGAGAGTCATGTGAGGCTCCCGGG...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGCGCAATCTGAGCCCCTaGCCACGCGCAGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLRNLSP*PRAAAS
Trigger: AGAGGCCGCTGCGCGTGGGCAGGGGCTCAGATTGCG...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACGGCGTTCAGGTCAGGTaGATCCTCCACGTCATCCGG +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHGVQVR*ILHVIR
Trigger: CCGGATGACGTGGAGGATGCACCTGACCTGAACGCC...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACCCTACCACCCCAGCCTaGTTTCCACCGCGACTTCCT +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHPTTPA*FPPRLP
Trigger: AGGAAGTCGCGGTGGAAAGCAGGCTGGGGTGGTAGG...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACCCCTGCCTGTCAACATaGTGGGACCGCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHPCLST*WDRLLP
Trigger: TGGAAGGAGGCGGTCCCAGCATGTTGACAGGCAGGG...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCTCCTCCTGTGGCCCTaGGTGGCCTGGTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYLLLWP*VAWCAP
Trigger: AGGAGCGCACCAGGCCACGCAGGGCCACAGGAGGAG...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGAAACACACCAAGGGGTaGTTGAAGGTCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLKHTKG*LKVQAR
Trigger: GCGGGCCTGGACCTTCAAGCACCCCTTGGTGTGTTT...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCGCTCATAGTTCTTCATaGTCAAATATAACTCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGAHSSS*SNITPP
Trigger: GGGCGGAGTTATATTTGACCATGAAGAACTATGAGC...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCCACCCTGGGGAGCATaGCCGCTGCTGGCATGTTTG +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCPPWGA*PLLACL
Trigger: CAAACATGCCAGCAGCGGCCATGCTCCCCAGGGTGG...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGTGCGTCCTCCTCCTGTaGCCCTGCGTGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLCVLLL*PCVAWC
Trigger: GCACCAGGCCACGCAGGGCCACAGGAGGAGGACGCA...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp ATCTCTCCACAGGTGCTACAGCTGGGATTCCAGGTCTaGCCAGGACACTCCTTCATCTCTTCAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISPQVLQLGFQV*PGHSFISSEWQ
Trigger: CTGCCACTCTGAAGAGATGAAGGAGTGTCCTGGCAAGACCTGGAATCCCAGCTGTAGCACCTGTGGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCGTAACCACTGATCAATaGGACAAGGTTCTACTTTCA +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGVTTDQ*DKVLLS
Trigger: TGAAAGTAGAACCTTGTCTCATTGATCAGTGGTTAC...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTGTGCCTGGGCACTCTaGACACCCTGCCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHCAWAL*TPCLST
Trigger: TGTTGACAGGCAGGGTGTTCAGAGTGCCCAGGCACA...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCGAGCCCCGCAGGGCTaGAATCGTTCCGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTRAPQG*NRSGVG
Trigger: CCCCACCCCGGAACGATTGCAGCCCTGCGGGGCTCG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGAACATCTCTCCACAGGTaGTACAGCTGGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRTSLHR*YSWDSR
Trigger: CCTGGAATCCCAGCTGTAGCACCTGTGGAGAGATGT...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGACTCAAAAACGTGGAGTaGACATGGGACCGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRLKNVE*TWDRGE
Trigger: TTCCCCACGGTCCCATGTCCACTCCACGTTTTTGAG...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCCGGGGCTCAAAAACGTaGAGTGGACATGGGACCGTG +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIRGSKT*SGHGTV
Trigger: CACGGTCCCATGTCCACTCCACGTTTTTGAGCCCCG...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp CCCTATCAAGCACAGCTGCACACATTCTGGGGTCTATaGATCTTGTCACCACTGATGTGGGGGCTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: PYQAQLHTFWGL*ILSPLMWGLSL
Trigger: CAGCGAAAGCCCCCACATCAGTGGTGACAAGATCAATAGACCCCAGAATGTGTGCAGCTGTGCTTGATAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp CAGGCCGTGCAGCTGCTCATCCGATACGGGACCCACTaGAGCCTAAACTTCCACCAAAAAGCAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: QAVQLLIRYGTH*SLNFHQKARTK
Trigger: TTTGGTTCTTGCTTTTTGGTGGAAGTTTAGGCTCAAGTGGGTCCCGTATCGGATGAGCAGCTGCACGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACTCTCAGGGGCCTCGCTaGCCCAGGAGAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHSQGPR*PRRNCP
Trigger: TGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGA...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACGTTTGCCTTCTGCCCTaGGGGGCACATACACCTTTG +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHVCLLP*GAHTPL
Trigger: CAAAGGTGTATGTGCCCCTCAGGGCAGAAGGCAAAC...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCACCAGCTGGAGGAGATaGAGGAGGAGTTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSITSWRR*RRSFPG
Trigger: CCCAGGAAAACTCCTCCTTCATCTCCTCCAGCTGGT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACGTGGTGAGACGAGATTaGGCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHVVRRD*AIALQP
Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGTCTCACCAC...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACGTTCCTCCTCACTCCTaGTTCTGCCTGTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHVPPHS*FCLSPM
Trigger: CATGGGAGACAGGCAGAAGCAGGAGTGAGGAGGAAC...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCGACCCGGGGCTAGGTaGCAGATGGCTAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLRPGAR*QMARDH
Trigger: GTGGTCTCTAGCCATCTGGCACCTAGCCCCGGGTCG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTTGGCTGCACCACGTATaGTGTGTCTGCCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSWLHHV*CVCQCL
Trigger: CAGACACTGGCAGACACAGCATACGTGGTGCAGCCA...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCCAGCCCGGCTAGCATaGAGCGAAAGAGCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLPARLA*SERARL
Trigger: CAGCCGAGCTCTTTCGCTCCATGCTAGCCGGGCTGG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAAGGACAGTGTGGGGCGTaGTCAAGGCAGCGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKGQCGA*SRQRSR
Trigger: CCTTGAGCGCTGCCTTGACCACGCCCCACACTGTCC...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCTTAACAGATAACACCTaGTCTGATCACCGTAAAACT +
Preference number: 4 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGLTDNT*SDHRKT
Trigger: AGTTTTACGGTGATCAGACCAGGTGTTATCTGTTAA...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGCCACACTGCAGTATGTaGGCGTGTGATGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLPHCSM*ACDAEQ
Trigger: CTGTTCAGCATCACACGCCCACATACTGCAGTGTGG...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCGGTTATCTCCCTGTGTaGGCGATGGCTCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCGYLPV*AMAHAA
Trigger: AGCTGCGTGAGCCATCGCCCACACAGGGAGATAACC...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTTGCCTGTCAACATGCTaGGACCGCCTCCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSCLSTC*DRLLPT
Trigger: AGTTGGAAGGAGGCGGTCCCAGCATGTTGACAGGCA...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AAAGGAGACCCCACGTCTCACATCCCAGAAGACATTGCCCAGCCCAGCAGCTCACACATTTGCTGTAGCTaGAAACAGCACTTCACACAT +
Preference number: 4 (lower is better)
Translates to: KGDPTSHIPEDIAQPSSSHICCS*KQHFTH
Trigger: ATGTGTGAAGTGCTGTTTTCAGCTACAGCAAATGTG...TGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGTGAGACGTGGGGTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGATGCACTCGGAACCGACTaGTGCCAATCGCGTCTACAA +
Preference number: 4 (lower is better)
Translates to: PTKCTSWLGQREHMSISDALGTD*CQSRLQ
Trigger: TTGTAGACGCGATTGGCATCAGTCGGTTCCGAGTGC...ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCCGCTGGGATTACTCTaGGGCTCAGGTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCPLGLL*GSGSLS
Trigger: AGACAGAGAACCTGAGCCTCAGAGTAATCCCAGCGG...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACTGGGAAGGACGATGTTaGAGGGGAAGAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHWEGRC*RGRTPS
Trigger: GGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCA...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAACCTAGTTCTGCCTCCTaGCCACTCTGGTGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKPSSAS*PLWCVL
Trigger: GAGGACGCACCAGAGTGGTCAGGAGGCAGAACTAGG...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAGTATCCCCTCACCCTaGTCACCCAGGGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFISIPSP*SPRARH
Trigger: GTGCCTGGCCCTGGGTGATCAGGGTGAGGGGATACT...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTTTGAACCCAAGAGGTTaGGGCTGCAGTGAGCTATGC +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSLNPRG*GCSELC
Trigger: GCATAGCTCACTGCAGCCTCAACCTCTTGGGTTCAA...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACGGCAGGACAATCCTTTaGACCCAAGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHGRTIL*TQEVEA
Trigger: AGCCTCAACCTCTTGGGTTCAAAGGATTGTCCTGCC...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCCGCGTCTCTTGCGATaGTTCCCCCACTCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLPRLLR*FPHSPE
Trigger: CTCAGGCGAGTGGGGGAAGCATCGCAAGAGACGCGG...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTATTCTCCGAGCTCCCTaGATCACCTTCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSILRAP*ITFFQQ
Trigger: CTGCTGGAAGAAGGTGATGCAGGGAGCTCGGAGAAT...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCACGAGATTGCGCCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCTRLRH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGCGCAATCTCGT...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACAAGTCAGTGGTGGGCTaGTCACCTGAGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNKSVVG*SPEGPS
Trigger: GGAGGGCCCCTCAGGTGAGCAGCCCACCACTGACTT...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACGCCTCGCCTCTTGGCTaGGCGTGGCTTACTAACTGG +
Preference number: 4 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYASPLG*AWLTNW
Trigger: CCAGTTAGTAAGCCACGCGCAGCCAAGAGGCGAGGC...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTCTCAAAAACGTGGAGTaGACATGGGACCGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSLKNVE*TWDRGE
Trigger: TTCCCCACGGTCCCATGTCCACTCCACGTTTTTGAG...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGACAGAGCGGGCTTCCCTaGGAATTAGTTTTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRQSGLP*ELVFGE
Trigger: TTCACCAAAAACTAATTCCCAGGGAAGCCCGCTCTG...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCGCGACTTCCTGTCCTaGGTCTCCACAGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTRDFLS*VSTATP
Trigger: GGGAGTGGCTGTGGAGACCCAGGACAGGAAGTCGCG...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGCCACCCCATCAGGGCTaGAGCCCAGAGAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLPPHQG*SPEREH
Trigger: GTGTTCTCTCTCTGGGCTCCAGCCCTGATGGGGTGG...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp ATTAAGTGTCTACTTGCACAGCTTCTTGGCTGCCGTTaGCCTTCTGCCCTGAGGGGCACATACACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: IKCLLAQLLGCR*PSALRGTYTFA
Trigger: TGCAAAGGTGTATGTGCCCCTCAGGGCAGAAGGCAAACGGCAGCCAAGAAGCTGTGCAAGTAGACACTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCGCTGGGATTACTCTaGGGCTCAGGTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRPLGLL*GSGSLS
Trigger: AGACAGAGAACCTGAGCCTCAGAGTAATCCCAGCGG...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCCGAGCCAGCAACGCTaGAGTCAGTGGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTPSQQR*SQWWAA
Trigger: AGCAGCCCACCACTGACTTCAGCGTTGCTGGCTCGG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGTCTTGGGGACCTCACTaGCTGGGGAGAGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTSWGPH*LGRDCP
Trigger: AGGGCAGTCTCTCCCCAGTCAGTGAGGTCCCCAAGA...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCGGCGTTCAGGTCAGGTaGATCCTCCACGTCATCCGG +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGGVQVR*ILHVIR
Trigger: CCGGATGACGTGGAGGATGCACCTGACCTGAACGCC...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCTGCCAAACCGCTTGGTaGCAGTTTCCATGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSICQTAW*QFPCIF
Trigger: GAAGATGCATGGAAACTGGCACCAAGCGGTTTGGCA...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCCAGCAGATAAACACATaGCAAACCGCTTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIQQINT*QTAWCQ
Trigger: CTGGCACCAAGCGGTTTGGCATGTGTTTATCTGCTG...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGAGGAAGCAGACCGTTCTaGTTTAGCTTAATTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRGSRPF*FSLIGS
Trigger: GCTACCAATTAAGCTAAAGCAGAACGGTCTGCTTCC...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTTCTGCCTGTCTCCCATaGTTCCCCTCATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTSACLP*FPSWPG
Trigger: ACCGGGCCATGAGGGGAAGCATGGGAGACAGGCAGA...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACCCACTGCCCAAGAGTTaGCCCCTTCAGGATGAAAAA +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHPLPKS*PLQDEK
Trigger: TTTTTCATCCTGAAGGGGGCAACTCTTGGGCAGTGG...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGGGGCACTCCTGTTGGTaGCCTCAGAGACCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLGHSCW*PQRPLH
Trigger: ATGAAGGGGTCTCTGAGGGCACCAACAGGAGTGCCC...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCTTCAAAGGTCACATaGGCCAACCAGCCGAGACTC +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRPSKVT*ANQPRL
Trigger: GAGTCTCGGCTGGTTGGCGCATGTGACCTTTGAAGG...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAGGACAGTGTGGGGCGTaGTCAAGGCAGCGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NGVIIRFHRQLHSNTQSLGQCGA*SRQRSR
Trigger: CCTTGAGCGCTGCCTTGACCACGCCCCACACTGTCC...TAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAGCACAAAGGACAGTGTaGGGCGTGGTCAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTAQRTV*GVVKAA
Trigger: CGCTGCCTTGACCACGCCCCACACTGTCCTTTGTGC...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCACATGCCAAACCGCTTaGTGCCAGTTTCCATGCATC +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSITCQTA*CQFPCI
Trigger: GATGCATGGAAACTGGCACCAAGCGGTTTGGCATGT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACACCAGGCAGGGCCGCTaGGATTACTCTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNTRQGR*DYSEAQ
Trigger: CTGAGCCTCAGAGTAATCCCAGCGGCCCTGCCTGGT...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGTTTATGTCCCCAACTTaGGGGAGTGCAATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAEFMSPT*GSAMVA
Trigger: TGCCACCATTGCACTCCCCCAAGTTGGGGACATAAA...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCTCCACGGCTTTGCCATaGCACACAATGTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCSTALP*HTMSAD
Trigger: GTCTGCAGACATTGTGTGCCATGGCAAAGCCGTGGA...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTTACTTTCTTGGCTGGTaGTCTCAGGGCAATGACGGT +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSYFLGW*SQGNDG
Trigger: ACCGTCATTGCCCTGAGACCACCAGCCAAGAAAGTA...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTGGCATGTTTGCACTTTaGCTGCACCACGTATGCTGT +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSGMFAL*LHHVCC
Trigger: ACAGCATACGTGGTGCAGCCAAAGTGCAAACATGCC...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCGTGGCTTACTAACTaGACCCCCACCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFAWLTN*TPTLGS
Trigger: GCTCCCCAGGGTGGGGGTCCAGTTAGTAAGCCACGC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCCTCTTGGCTGCGCGTaGCTTACTAACTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTPLGCA*LTNWTP
Trigger: GGGGGTCCAGTTAGTAAGCCACGCGCAGCCAAGAGG...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGGTCCTGTGCTGTCAGTaGACTGCATTCCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLVLCCQ*TAFPKH
Trigger: GTGCTTGGGGAATGCAGTTCACTGACAGCACAGGAC...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCCAGTAGAGAGGGGGTaGTGCTGGCAAAGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTPVERG*CWQRGS
Trigger: CGAACCCCTTTGCCAGCATCACCCCCTCTCTACTGG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTTCAGAGCCAGTGCTCTaGATGAAGTGTCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRSEPVL*MKCLTP
Trigger: TGGGGTGAGACACTTCATTCAGAGCACTGGCTCTGA...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACCACAAAGTGGGCACATaGCATGTTTGCTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHHKVGT*HVCCSS
Trigger: GGAAGAACAGCAAACATGTCATGTGCCCACTTTGTG...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGAGGAAGCCAACCAAATaGACCAGCTGGTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLRKPTK*TSWLGQ
Trigger: CTGGCCCAACCAGCTGGTGCATTTGGTTGGCTTCCT...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGATATGTTGCTCTCGTCTaGGTCATCATTGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRYVALV*VIIVVQ
Trigger: CTGAACAACAATGATGACGCAGACGAGAGCAACATA...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACTGGCCCGGTGTGGTCTaGTGGGCCTCTCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHWPGVV*WASPSF
Trigger: GAAAGAAGGAGAGGCCCAGCAGACCACACCGGGCCA...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCTTACTGAACTATCAGTaGACACCCCCAGCCACACAA +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSILLNYQ*TPPATQ
Trigger: TTGTGTGGCTGGGGGTGTGCACTGATAGTTCAGTAA...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACCCTATCAAGCACAGCTaGACACATTCTGGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHPIKHS*THSGVY
Trigger: ATAGACCCCAGAATGTGTGCAGCTGTGCTTGATAGG...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAGGGGAGCATGGCCGCTaGTGGCATGTTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTGEHGR*WHVCTL
Trigger: CAAAGTGCAAACATGCCAGCAGCGGCCATGCTCCCC...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCCAATCCTACACTCTaGCCCCGCCCATCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHANPTL*PRPSSP
Trigger: AGGCGAAGATGGGCGGGGGCAGAGTGTAGGATTGGC...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGGCACAAAGGACAGTGTaGGGCGTGGTCAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRAQRTV*GVVKAA
Trigger: CGCTGCCTTGACCACGCCCCACACTGTCCTTTGTGC...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCCGGGGCTCAAAAACGTaGAGTGGACATGGGACCGTG +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGRGSKT*SGHGTV
Trigger: CACGGTCCCATGTCCACTCCACGTTTTTGAGCCCCG...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATACCATCTCTGTGGCGGTaGCTTAGCACTCGGAACCGA +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIPSLWR*LSTRNR
Trigger: TCGGTTCCGAGTGCTAAGCCACCGCCACAGAGATGG...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACACCAGGCAGGGCCGCTaGGATTACTCTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHTRQGR*DYSEAQ
Trigger: CTGAGCCTCAGAGTAATCCCAGCGGCCCTGCCTGGT...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACGAGCCAGATGCTGACTaGGAAGTGAATCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHEPDAD*EVNPSF
Trigger: GAAAGAAGGATTCACTTCCCAGTCAGCATCTGGCTC...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCGAGGCTACTACTTCTTaGGTAAGGACTAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIEATTS*VRTSLG
Trigger: GCCCAAACTAGTCCTTACCCAAGAAGTAGTAGCCTC...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGGTCTATGCTAAAACATaGGGAGATGGGCCGGGCACG +
Preference number: 4 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLVYAKT*GDGPGT
Trigger: CGTGCCCGGCCCATCTCCCCATGTTTTAGCATAGAC...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTTCCCTGTGTGGGCGATaGCTCACGCAGCTCATCCTT +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTSLCGR*LTQLIL
Trigger: AAGGATGAGCTGCGTGAGCCATCGCCCACACAGGGA...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTGGCTGGATGCCTACTaGGCTCTCCTGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGWLDAY*ALLDTE
Trigger: CTCTGTGTCCAGGAGAGCCCAGTAGGCATCCAGCCA...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTACTTGCACAGCTTCTTaGCTGCCGTTTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRTCTAS*LPFAFC
Trigger: GCAGAAGGCAAACGGCAGCCAAGAAGCTGTGCAAGT...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCAAAAGGATCTGGGTGTTaGTCTCCAAAGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MFGKRPILEPHPQALDEAKGSGC*SPKRCR
Trigger: CCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTT...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCACCTACTTTCTTGGCTaGTGGTCTCAGGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCTYFLG*WSQGND
Trigger: GTCATTGCCCTGAGACCACCAGCCAAGAAAGTAGGT...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp GCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTaGATGAAGCACAATGAATGGACGGCTATTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ASVPFWNLIHKH*MKHNEWTAIRP
Trigger: TGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 72 bp CAGACCTGGGTGCAAATTCGAGTTTATGTCCCCAACTaGGGGGAGTGCAATGGTGGCACTTCAATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTWVQIRVYVPN*GECNGGTSISS
Trigger: TGAAGAAATTGAAGTGCCACCATTGCACTCCCCCAAGTTGGGGACATAAACTCGAATTTGCACCCAGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACGCACTCGGAACCGACTaGTGCCAATCGCGTCTACAA +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNALGTD*CQSRLQ
Trigger: TTGTAGACGCGATTGGCATCAGTCGGTTCCGAGTGC...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATATGCTGCAGACTAGGGTaGTGTCAATCGCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFICCRLG*CQSQSP
Trigger: AGGGGACTGCGATTGACATCACCCTAGTCTGCAGCA...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGATAGAAGGCCAGATGAGTaGCCTGTATCACAGGATATG +
Preference number: 4 (lower is better)
Translates to: PTKCTSWLGQREHMSISDRRPDE*PVSQDM
Trigger: CATATCCTGTGATACAGGTCACTCATCTGGCCTTCT...ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCAGCCGTCAGTCTGTGGTaGTGTGTTAGTACATCCCTA +
Preference number: 4 (lower is better)
Translates to: MFGKRPILEPHPQALDEAAVSLW*CVSTSL
Trigger: TAGGGATGTACTAACACATCACCACAGACTGACGGC...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCACAGCAGATAAACACATaGCAAACCGCTTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: MFGKRPILEPHPQALDEAQQINT*QTAWCQ
Trigger: CTGGCACCAAGCGGTTTGGCATGTGTTTATCTGCTG...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACACTAGTTTGGGCTCCTaGACTGAACAATGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHTSLGS*TEQWCD
Trigger: ATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCGGGCTTTCAGAAAGCTaGCTTTGGGATCTTACTTGC +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCGLSES*LWDLTC
Trigger: GCAAGTAAGATCCCAAAGGCAGCTTTCTGAAAGCCC...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCCTCACTCCTGCTTCTaGCTGTCTCCCATGCTTCCC +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRPHSCF*LSPMLP
Trigger: GGGAAGCATGGGAGACAGGCAGAAGCAGGAGTGAGG...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCCCTAAGGGCTTTGGATaGAAGAAACTATCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIPKGFG*KKLSLS
Trigger: TGAGAGGGATAGTTTCTTGCATCCAAAGCCCTTAGG...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGAAAGTGTGCCTCATGGTaGATTACTACAACCTTATTG +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRKCASW*ITTTLL
Trigger: CAATAAGGTTGTAGTAATCCACCATGAGGCACACTT...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATACCTGGGCAAAGGATCTaGGTGTTGGTCTCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIPGQRI*VLVSKA
Trigger: CGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTGAGCATGGCCGCTGCTaGCATGTTTGCACTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSEHGRC*HVCTLA
Trigger: AGCCAAAGTGCAAACATGCCAGCAGCGGCCATGCTC...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGAAGGAGGAGTTTTCCTaGGGCCTTCAGAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLKEEFS*GLQRKP
Trigger: GGGCTTTCTCTGAAGGCCCCAGGAAAACTCCTCCTT...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGTCAAGCGAGAGCCCCTaGCTTTCTTCTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLSSESP*LSSVSE
Trigger: CTCTGAGACAGAAGAAAGTCAGGGGCTCTCGCTTGA...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTATCAAGCGAGAGCCCCTaGCTTTCTTCTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLSSESP*LSSVSE
Trigger: CTCTGAGACAGAAGAAAGTCAGGGGCTCTCGCTTGA...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGGTCCTGTGCTGTCAGTaGACTGCATTCCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRVLCCQ*TAFPKH
Trigger: GTGCTTGGGGAATGCAGTTCACTGACAGCACAGGAC...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTGGGAGGCTTCCTTCATaGTATGACCGTAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSGRLPS*YDRRML
Trigger: CAGCATCCTACGGTCATATCATGAAGGAAGCCTCCC...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATACCCTGTGGTGACACATaGACACCACGAGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIPCGDT*TPRVST
Trigger: AGTAGAGACTCGTGGTGTTCATGTGTCACCACAGGG...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCAACTCCCTCCCTGTGGTaGCACATGAACACCACGAGT +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKATPSLW*HMNTTS
Trigger: ACTCGTGGTGTTCATGTGTCACCACAGGGAGGGAGT...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACTTGCCCCCTTCAGGATaGAAAACTCTGGGACTCTTC +
Preference number: 4 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYLPPSG*KTLGLF
Trigger: GAAGAGTCCCAGAGTTTTTCATCCTGAAGGGGGCAA...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACGCCTTGCAGCTGTTGTaGCTCATTCCTCAATCCGGT +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNALQLL*LIPQSG
Trigger: ACCGGATTGAGGAATGAGTCACAACAGCTGCAAGGC...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCCCTCCTCACAGAAATaGCAGCCGCCAAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYPSSQK*QPPKGL
Trigger: TAAACCTTTTGGCGGCTGTCATTTCTGTGAGGAGGG...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTGCAGCCTCTCCTTTATaGATTAAACGTGGGTACATT +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSAASPL*IKRGYI
Trigger: AATGTACCCACGTTTAATTCATAAAGGAGAGGCTGC...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAAGGTGCTTCTGCTCCTaGGCTCCTAAACACACCAAG +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLRCFCS*APKHTK
Trigger: CTTGGTGTGTTTAGGAGCTCAGGAGCAGAAGCACCT...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGGTGAGCGAAGAAAACTaGTTTATTGTGAAAAGCCGT +
Preference number: 4 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLVSEEN*FIVKSR
Trigger: ACGGCTTTTCACAATAAATCAGTTTTCTTCGCTCAC...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAGGGAAGAAGGCCATGTaGCGATGGACACGGAAACTG +
Preference number: 4 (lower is better)
Translates to: NGVIIRFHRQLHSNTQSLGKKAM*RWTRKL
Trigger: CAGTTTCCGTGTCCATCGTCACATGGCCTTCTTCCC...TAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTTTGAGCCCAGGAATTTaGGACCAGCTTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTLSPGI*DQLGQH
Trigger: GTGTTGCCCAAGCTGGTCTCAAATTCCTGGGCTCAA...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGGTGGGAGAACTGCTTaGGCCCAGGAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHGGRTA*AQEFET
Trigger: GGTCTCAAATTCCTGGGCTCAAGCAGTTCTCCCACC...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGACTAAGAAGAAAAAGATaGTCAAAGAGTATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRLRRKR*SKSMQG
Trigger: ACCCTGCATACTCTTTGATCATCTTTTTCTTCTTAG...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTATTCTCCGAGCTCCCTaGATCACCTTCTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRILRAP*ITFFQQ
Trigger: CTGCTGGAAGAAGGTGATGCAGGGAGCTCGGAGAAT...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACTGCCAAACCGCTTGGTaGCAGTTTCCATGCATCTTC +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHCQTAW*QFPCIF
Trigger: GAAGATGCATGGAAACTGGCACCAAGCGGTTTGGCA...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGTCAATATCACCAACGTaGATTACAGGATGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLSISPT*ITGWKS
Trigger: TGACTTCCATCCTGTAATGCACGTTGGTGATATTGA...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACGGGAGGAGGTTTAAGTaGAAAAAGGACACATTTGTG +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHGRRFK*KKDTFV
Trigger: CACAAATGTGTCCTTTTTGCACTTAAACCTCCTCCC...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAACCCAACTTGGGGGAGTaGAATGGTGGCACTTCAATT +
Preference number: 4 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKPNLGE*NGGTSI
Trigger: AATTGAAGTGCCACCATTGCACTCCCCCAAGTTGGG...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTCAATCCGGTGGGATaGAAAGGATCTATCCATAGA +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCLNPVG*KGSIHR
Trigger: TCTATGGATAGATCCTTTGCATCCCACCGGATTGAG...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGTCTGACAAGCTGCACTaGCATCTTGGAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLSDKLH*HLGELA
Trigger: AGCAAGCTCTCCAAGATGCCAGTGCAGCTTGTCAGA...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGTCTTTAAGCCAGCGCTaGGTGCTGTTGGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTSLSQR*VLLEGC
Trigger: GCATCCTTCCAACAGCACCCAGCGCTGGCTTAAAGA...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACTCTTTAAGCCAGCGCTaGGTGCTGTTGGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNSLSQR*VLLEGC
Trigger: GCATCCTTCCAACAGCACCCAGCGCTGGCTTAAAGA...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACAAGTTCTTCATACTCTaGACCCTCCACCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHKFFIL*TLHLFI
Trigger: GATGAAAAGGTGGAGGGTCCAGAGTATGAAGAACTT...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACTCTTTCATGCGATCCTaGAGAGACGCGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHSFMRS*RDANQE
Trigger: TTCCTGGTTCGCGTCTCTCCAGGATCGCATGAAAGA...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTGTTGTTTTCCAACTATaGGCTCCATTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSVVFQL*APFRLQ
Trigger: CTGAAGTCTGAATGGAGCCCATAGTTGGAAAACAAC...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACACCAAATGCACCAGCTaGTTGGGCCAGAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHTKCTS*LGQREH
Trigger: ATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGT...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACCACCCCTGTAGCTACTGCCCAAGACATTCAAACCTGCCAATCCTACACTCTGGGTTTGGGCGATGAATaGAAAAATACAGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: TTPVATAQDIQTCQSYTLGLGDE*KNTEQH
Trigger: ATGCTGTTCTGTATTTTTCCATTCATCGCCCAAACC...CAGAGTGTAGGATTGGCAGGTTTGAATGTCTTGGGCAGTAGCTACAGGGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCAATAGAATCAGAATGTaGCCTTTGGGAAGGACGATG +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSINRIRM*PLGRTM
Trigger: CATCGTCCTTCCCAAAGGCCACATTCTGATTCTATT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACCGGAATCCACAATGCTaGGCTCTGGGAAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHRNPQC*ALGKGI
Trigger: AATGCCTTTTCCCAGAGCCCAGCATTGTGGATTCCG...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACCAGGATGAAAAACTCTaGGACTCTTCCTCACAGATA +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHQDEKL*DSSSQI
Trigger: TATCTGTGAGGAAGAGTCCCAGAGTTTTTCATCCTG...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCCTACTGGGCTCTCCTaGACACAGAGGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTPTGLS*TQRLSK
Trigger: CTTTGAGAGCCTCTGTGTCCAGGAGAGCCCAGTAGG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp TTACAGACGAGGAAGCCAACCAAATGCACCAGCTGGTaGGGCCAGAGAGAACATATGAGTATCTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: LQTRKPTKCTSW*GQREHMSISDS
Trigger: TGAATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGGCTTCCTCGTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCAGGAAACAGACTGTTaGTGCACAGAATCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLQETDC*CTESWR
Trigger: TCTCCACGATTCTGTGCATCAACAGTCTGTTTCCTG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGATGGCTGCCAGAAACCTTaGCAGAGAGAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: PTKCTSWLGQREHMSISDGCQKP*QREKSI
Trigger: AATTGATTTTTCTCTCTGTCAAGGTTTCTGGCAGCC...ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGCAGAATTGTCATTTTTaGGGAGGACTCAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAEQNCHF*GGLNVW
Trigger: CCAAACATTGAGTCCTCCTCAAAAATGACAATTCTG...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTAAGAACTCCTTCCACTaGATGCCGCTGCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTKNSFH*MPLLSM
Trigger: CATAGACAGCAGCGGCATTCAGTGGAAGGAGTTCTT...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACTCCCCCAGCATCCAGTaGGGAATTAATCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHSPSIQ*GINRTP
Trigger: AGGAGTGCGATTAATTCCTCACTGGATGCTGGGGGA...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGAAACAGAAGGCCAGATaGGTGACCTGTATCACAGGA +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLKQKAR*VTCITG
Trigger: TCCTGTGATACAGGTCACTCATCTGGCCTTCTGTTT...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTCTGAAAGCCCCGCGTaGTCAGCAGATAAACACATG +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSSESPA*SADKHM
Trigger: CATGTGTTTATCTGCTGAGCACGCGGGGCTTTCAGA...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCAAATTTGTTCTTTCATaGGATCCTGGAGAGACGCGA +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCKFVLS*DPGETR
Trigger: TCGCGTCTCTCCAGGATCGCATGAAAGAACAAATTT...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGACGGCTATTCGTCCATaGCTGACATTTATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAETAIRP*LTFIKA
Trigger: TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGT...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGATATGACCGTAGGATaGTGTCACCCTGACCCGGTT +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFDMTVG*CHPDPV
Trigger: AACCGGGTCAGGGTGACAGCATCCTACGGTCATATC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACATCTGACAAGCTGCACTaGCATCTTGGAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTSDKLH*HLGELA
Trigger: AGCAAGCTCTCCAAGATGCCAGTGCAGCTTGTCAGA...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTGGCACACACAAAGATaGGGACGTCTCTGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGWHTQR*GRLWSD
Trigger: ATCTGACCAGAGACGTCCCCATCTTTGTGTGTGCCA...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACTCTTTCATGCGATCCTaGAGAGACGCGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNSFMRS*RDANQE
Trigger: TTCCTGGTTCGCGTCTCTCCAGGATCGCATGAAAGA...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAGCAAGCGTCCCATTTTaGAACCTCATCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLASVPF*NLIHKH
Trigger: GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGC...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp AATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTACACGCCTTTACCATCTaGCAGAGCCAGATGCTGACT +
Preference number: 4 (lower is better)
Translates to: NGVIIRFHRQLHSNTQSLHAFTI*QSQMLT
Trigger: AGTCAGCATCTGGCTCTGCCAGATGGTAAAGGCGTG...TAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCACGCCTTTACCATCTaGCAGAGCCAGATGCTGACT +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRHAFTI*QSQMLT
Trigger: AGTCAGCATCTGGCTCTGCCAGATGGTAAAGGCGTG...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGGCAATTTACAACACCTaGGACTACAACAGGACATTA +
Preference number: 4 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAEAIYNT*DYNRTL
Trigger: TAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATTGC...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGGTGGTCGTGACCCTCTaGTTAAGAATGTCCACCTTA +
Preference number: 4 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLVVVTL*LRMSTL
Trigger: TAAGGTGGACATTCTTAACCAGAGGGTCACGACCAC...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACGACACACACGGGGGATaGGATAAGCTAAAAATGCCA +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHDTHGG*DKLKMP
Trigger: TGGCATTTTTAGCTTATCCCATCCCCCGTGTGTGTC...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTGGGCTAGGTGCCAGATaGCTAGAGACCACCTGTATA +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTGLGAR*LETTCI
Trigger: TATACAGGTGGTCTCTAGCCATCTGGCACCTAGCCC...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGAGTGGCAGGCATCACTaGAAGTCACTGAGACACACA +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTSGRHH*KSLRHT
Trigger: TGTGTGTCTCAGTGACTTCCAGTGATGCCTGCCACT...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACTTCATCTCTTCAGAGTaGCAGGCATCACTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHFISSE*QASLEV
Trigger: GACTTCCAGTGATGCCTGCCACTCTGAAGAGATGAA...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGGACAGAGTCAAGCCTaGGCCCTCTGGTGTATTCTA +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFGQSQA*ALWCIL
Trigger: TAGAATACACCAGAGGGCCCAGGCTTGACTCTGTCC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTATCTTCGCCTTTGCCATaGAGACACAGTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLSSPLP*RHSGKL
Trigger: CAGCTTTCCACTGTGTCTCCATGGCAAAGGCGAAGA...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp TTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTaGGAACCTCATCCACAAGCACTTGATGAAGCACAA +
Preference number: 4 (lower is better)
Translates to: FEEDSMFGKRPI*EPHPQALDEAQ
Trigger: TTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 72 bp CAAGGTCAGATCCCACCAGACACAGAATTGTCATTTTaGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: QGQIPPDTELSF*RRTQCLASVPF
Trigger: AAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGGGATCTGACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 72 bp AACCTCACACAAGGTCAGATCCCACCAGACACAGAATaGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: NLTQGQIPPDTE*SFLRRTQCLAS
Trigger: GCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGGGATCTGACCTTGTGTGAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 72 bp TATCCAGAGGCTACTACTTCTTGGGTAAGGACTAGTTaGGGCTCCTGCACTGAACAATGGTGTGATTATTCG +
Preference number: 4 (lower is better)
Translates to: YPEATTSWVRTS*GSCTEQWCDYS
Trigger: CGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCAAGAAGTAGTAGCCTCTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 72 bp AAGCTAAAAATGCCACGGGCTTTCAGAAAGCTGCCTTaGGGATCTTACTTGCATTTCAAAGACACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLKMPRAFRKLP*GSYLHFKDTGR
Trigger: CCTGCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAGGCAGCTTTCTGAAAGCCCGTGGCATTTTTAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp ACCTCTCCTGAGGCACAAAGTGGGCACATGACATGTTaGCTGTTCTTCCTTTTAATACTGAGGAGTCCACTA +
Preference number: 4 (lower is better)
Translates to: TSPEAQSGHMTC*LFFLLILRSPL
Trigger: TAGTGGACTCCTCAGTATTAAAAGGAAGAACAGCAAACATGTCATGTGCCCACTTTGTGCCTCAGGAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACATCAGATTTCTCAGATaGATTCTCCGAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNIRFLR*ILRAPC
Trigger: GCAGGGAGCTCGGAGAATTCATCTGAGAAATCTGAT...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACTGGGCTCCTTTGAAGTaGGAGATCTTTCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHWAPLK*EIFLGN
Trigger: ATTCCCAAGAAAGATCTCTCACTTCAAAGGAGCCCA...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGGAGTTTGGGCTCCTTTaGAGTGAGAGATCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLEFGLL*SERSFL
Trigger: CAAGAAAGATCTCTCACTTCAAAGGAGCCCAAACTC...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTCTTGATGAAGCACAATaGATGGACGGCTATTCGTCC +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSLDEAQ*MDGYSS
Trigger: GGACGAATAGCCGTCCATTCATTGTGCTTCATCAAG...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCAACTGTGTGACCTTATaGCATTTAAAGAGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSINCVTL*HLKSEE
Trigger: TTCCTCACTCTTTAAATGTCATAAGGTCACACAGTT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTAAACTTTTCTTTCAATaGCAGCAGCCTCTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSKLFFQ*QQPLLY
Trigger: ATAAAGGAGAGGCTGCTGTCATTGAAAGAAAAGTTT...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGTTCATTCTGACAAGCTaGACTGGCATCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTFILTS*TGILES
Trigger: GCTCTCCAAGATGCCAGTGCAGCTTGTCAGAATGAA...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTCATTCTGACAAGCTaGACTGGCATCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSFILTS*TGILES
Trigger: GCTCTCCAAGATGCCAGTGCAGCTTGTCAGAATGAA...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACACACATTACCTTCTGTaGTTCTTTCTTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHTHYLL*FFLHRV
Trigger: AACTCTGTGAAGAAAGAAGCACAGAAGGTAATGTGT...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTGCATTAGCCAGCTCTTaGCGACTATTCATCTTACGC +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSALASS*RLFILR
Trigger: GCGTAAGATGAATAGTCGGCAAGAGCTGGCTAATGC...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCGACTTTTACATAACATaGCGAAGGAGAAGACTCAGA +
Preference number: 4 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCDFYIT*RRRRLR
Trigger: TCTGAGTCTTCTCCTTCGGCATGTTATGTAAAAGTC...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACCGTGATGTTTCTAAGTaGTCAGTAAGTACCAATCTA +
Preference number: 4 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHRDVSK*SVSTNL
Trigger: TAGATTGGTACTTACTGAGCACTTAGAAACATCACG...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTTTCCCTGCCCTTTCCTaGAGAACATACAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFFPALS*RTYSRG
Trigger: CCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAA...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTTATTCCTATAAATCTTaGATCTTATCCCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSYSYKS*ILSPPH
Trigger: ATGGGGTGGGGATAAGATGCAAGATTTATAGGAATA...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCATTTCAAATTCTGGTCTaGAAACAGACCCCGAAATGG +
Preference number: 4 (lower is better)
Translates to: MFGKRPILEPHPQALDEAFQILV*KQTPKW
Trigger: CCATTTCGGGGTCTGTTTGCAGACCAGAATTTGAAA...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACATGTTTGCACTTTGGCTaGACCACGTATGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTCLHFG*TTYAVS
Trigger: AGACACAGCATACGTGGTGCAGCCAAAGTGCAAACA...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTAGGTGCAGTGGCTTATaGCTGCAATCTCACACTTTG +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSRCSGL*LQSHTL
Trigger: CAAAGTGTGAGATTGCAGGCATAAGCCACTGCACCT...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAAGATGGGGACGTCTCTaGTCAGATTTGACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTRWGRL*SDLTVL
Trigger: CAGAACTGTCAAATCTGACCAGAGACGTCCCCATCT...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTACATGCCAAACCGCTTaGTGCCAGTTTCCATGCATC +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTTCQTA*CQFPCI
Trigger: GATGCATGGAAACTGGCACCAAGCGGTTTGGCATGT...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACATGAAGCACAATGAATaGACGGCTATTCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYMKHNE*TAIRPC
Trigger: GCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCAAGCGTCCCATTTTaGAACCTCATCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFASVPF*NLIHKH
Trigger: GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGGGAGGACTCAATGTTTaGCAAGCGTCCCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLGGLNV*QASHFG
Trigger: TCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCC...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAGAGCCAGATGCTGACTaGGAAGTGAATCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIEPDAD*EVNPSF
Trigger: GAAAGAAGGATTCACTTCCCAGTCAGCATCTGGCTC...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTGAGGCTACTACTTCTTaGGTAAGGACTAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTEATTS*VRTSLG
Trigger: GCCCAAACTAGTCCTTACCCAAGAAGTAGTAGCCTC...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACAGTCAACGCTGTCAATaGCATCCACCTTTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHSQRCQ*HPPFCV
Trigger: GACGCAGAAAGGTGGATGCCATTGACAGCGTTGACT...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTCACAGAGGGTACAGATaGCATTGCCAACCCTCATAT +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTHRGYR*HCQPSY
Trigger: ATATGAGGGTTGGCAATGCCATCTGTACCCTCTGTG...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACATACCTACTTTCTTaGCTGGTGGTCTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTTYLLS*LVVSGQ
Trigger: TTGCCCTGAGACCACCAGCCAAGAAAGTAGGTATGT...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTTCTGAATTCCCTACCTaGACATACCTACTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRSEFPT*TYLLSW
Trigger: CCAAGAAAGTAGGTATGTCCAGGTAGGGAATTCAGA...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAATTTGAGACCAGCTTaGGCAACACAGCTAGACCTC +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFINLRPA*ATQLDL
Trigger: GAGGTCTAGCTGTGTTGCCCAAGCTGGTCTCAAATT...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp GACACAGAATTGTCATTTTTGAGGAGGACTCAATGTTaGGCAAGCGTCCCATTTTGGAACCTCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: DTELSFLRRTQC*ASVPFWNLIHK
Trigger: CTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTCTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
3UTR CAA 72 bp CAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTaGGTTAGCCTGTGTTCTAAGAAATCCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QLHSNTQSLSVV*VSLCSKKSTSR
Trigger: TCTGGAAGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTGGGCTCCTTTGAAGTaGGAGATCTTTCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGWAPLK*EIFLGN
Trigger: ATTCCCAAGAAAGATCTCTCACTTCAAAGGAGCCCA...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAGAGTTTGGGCTCCTTTaGAGTGAGAGATCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTEFGLL*SERSFL
Trigger: CAAGAAAGATCTCTCACTTCAAAGGAGCCCAAACTC...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACCAGGAAACAGACTGTTaGTGCACAGAATCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHQETDC*CTESWR
Trigger: TCTCCACGATTCTGTGCATCAACAGTCTGTTTCCTG...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTCTTGATGAAGCACAATaGATGGACGGCTATTCGTCC +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFLDEAQ*MDGYSS
Trigger: GGACGAATAGCCGTCCATTCATTGTGCTTCATCAAG...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGATGCTGACTGGGAAGTaGATCCTTCTTTCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLMLTGK*ILLSRE
Trigger: TTCACGAGAAAGAAGGATTCACTTCCCAGTCAGCAT...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGCTCGTGGAGAAGCTGTaGTCACATTGTGGTTATTTA +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLLVEKL*SHCGYL
Trigger: TAAATAACCACAATGTGATCACAGCTTCTCCACGAG...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAGGCAGGTTTGGGCGATaGATGGAAAAATACAGAACA +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTGRFGR*MEKYRT
Trigger: TGTTCTGTATTTTTCCATTCATCGCCCAAACCTGCC...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACTGCTCACCTAAAAGCTaGGTCACTGCTAAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNCSPKS*VTAKRL
Trigger: TAGCCTTTTAGCAGTGACTCAGCTTTTAGGTGAGCA...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGCAACCCTCATATAAATaGTGGAGCCCAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLQPSYK*WSPREC
Trigger: ACATTCTCTTGGGCTCCATCATTTATATGAGGGTTG...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCTTAGATTAACTGAGTaGACAGCAGTGGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTLRLTE*TAVGVH
Trigger: GTGAACTCCCACTGCTGTTCACTCAGTTAATCTAAG...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCACTCCAGGAGCACAAATaGGGAAACTCATTGTCACAC +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKALQEHK*GNSLSH
Trigger: GTGTGACAATGAGTTTCCTCATTTGTGCTCCTGGAG...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCAGGGTTCTCTATTATaGTCAGGGCCAATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTQGSLL*SGPILH
Trigger: GTGAAGGATTGGCCCTGATCATAATAGAGAACCCTG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGCTGTATCACAGGATATaGCAACACATCACCTATCTC +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLLYHRI*QHITYL
Trigger: GAGATAGGTGATGTGTTGTCATATCCTGTGATACAG...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTCAAAGAGCAATCTCATaGAGAGGGCACACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRQRAIS*RGHTQS
Trigger: ACTTTGAGTGTGCCCTCTGCATGAGATTGCTCTTTG...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTCAAAGAGCAATCTCATaGAGAGGGCACACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTQRAIS*RGHTQS
Trigger: ACTTTGAGTGTGCCCTCTGCATGAGATTGCTCTTTG...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCATTAGCCAGCTCTTaGCGACTATTCATCTTACGC +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFALASS*RLFILR
Trigger: GCGTAAGATGAATAGTCGGCAAGAGCTGGCTAATGC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACATGACTCCCCCACGCTaGTATTACTCTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNMTPPR*YYSFLL
Trigger: AAGCAGAAAAGAGTAATAGCAGCGTGGGGGAGTCAT...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCATAAAATGTTTTCTATaGTCTTCAGGGCAACGTATG +
Preference number: 4 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIIKCFL*SSGQRM
Trigger: CATACGTTGCCCTGAAGAGCATAGAAAACATTTTAT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGAAGAGGGCTATGTCTTaGATTCTTGTATATAAAAGC +
Preference number: 4 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAEKRAMS*ILVYKS
Trigger: GCTTTTATATACAAGAATGCAAGACATAGCCCTCTT...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAGCTTACAAATCAGCTTaGTTTAAATGGGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIAYKSA*FKWGTL
Trigger: GAGGGTGCCCCATTTAAAGCAAGCTGATTTGTAAGC...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCAGAGGAAGCGGGAAAATaGCTGATCCTTACAACTCAC +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKAEEAGK*LILTTH
Trigger: GTGAGTTGTAAGGATCAGGCATTTTCCCGCTTCCTC...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACGCTCATAGTTCTTCATaGTCAAATATAACTCCGCCC +
Preference number: 4 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHAHSSS*SNITPP
Trigger: GGGCGGAGTTATATTTGACCATGAAGAACTATGAGC...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGAGATGGGGACGTCTCTaGTCAGATTTGACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRRWGRL*SDLTVL
Trigger: CAGAACTGTCAAATCTGACCAGAGACGTCCCCATCT...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACATGAAGCACAATGAATaGACGGCTATTCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNMKHNE*TAIRPC
Trigger: GCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGGAGGACTCAATGTTTaGCAAGCGTCCCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHGGLNV*QASHFG
Trigger: TCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCC...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCTTCAGGAAGGCTCGTaGAGAAGCTGTGATCACATT +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTLQEGS*RSCDHI
Trigger: AATGTGATCACAGCTTCTCCACGAGCCTTCCTGAAG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTCCAGCTTCACATTTATaGCCAACTGTTGGACCACTG +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFPASHL*PTVGPL
Trigger: CAGTGGTCCAACAGTTGGCCATAAATGTGAAGCTGG...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCACATTTGCTGTAGCTaGAAACAGCACTTCACACAT +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLHICCS*KQHFTH
Trigger: ATGTGTGAAGTGCTGTTTTCAGCTACAGCAAATGTG...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAGGCTGCCAGAAACCTTaGCAGAGAGAAAAATCAATT +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLGCQKP*QREKSI
Trigger: AATTGATTTTTCTCTCTGTCAAGGTTTCTGGCAGCC...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGATGCTGACTGGGAAGTaGATCCTTCTTTCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRMLTGK*ILLSRE
Trigger: TTCACGAGAAAGAAGGATTCACTTCCCAGTCAGCAT...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAATCCATTATAAACACCTaGCAAGCTCAGCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKSIINT*QAQQNY
Trigger: GTAGTTTTGCTGAGCTTGTCAGGTGTTTATAATGGA...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTAAGTCGGTCACTGGTTaGACTGTTCACAGTACAAAA +
Preference number: 4 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSKSVTG*TVHSTK
Trigger: TTTTGTACTGTGAACAGTTCAACCAGTGACCGACTT...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGAAGCGGGAAAATGCCTaGTCCTTACAACTCACATAT +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTKRENA*SLQLTY
Trigger: ATATGTGAGTTGTAAGGATCAGGCATTTTCCCGCTT...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGGTGCTGTTGGAAGGATaGTTTCTAACGCCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLVLLEG*FLTPFY
Trigger: ATAAAAAGGCGTTAGAAAGCATCCTTCCAACAGCAC...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTACTAGTTTGGGCTCCTaGACTGAACAATGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFTSLGS*TEQWCD
Trigger: ATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAAATGTAACGAGAGCATaGCTATTGGAGCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLNVTRA*LLEHFQ
Trigger: CTGAAAGTGCTCCAATAGGCATGCTCTCGTTACATT...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCAACTAATGCTGATACATaGCCTGCTTCTGCCGAAACA +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKATNADT*PASAET
Trigger: TGTTTCGGCAGAAGCAGGGCATGTATCAGCATTAGT...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAAAGTTCTTCATACTCTaGACCCTCCACCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLKFFIL*TLHLFI
Trigger: GATGAAAAGGTGGAGGGTCCAGAGTATGAAGAACTT...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCGTTGTTTTCCAACTATaGGCTCCATTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGVVFQL*APFRLQ
Trigger: CTGAAGTCTGAATGGAGCCCATAGTTGGAAAACAAC...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGTTCCAGATAAAAACGTaGTTCCCCCATATTGTCTAC +
Preference number: 4 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLFQIKT*FPHIVY
Trigger: GTAGACAATATGGGGGAACCACGTTTTTATCTGGAA...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGACGTGCATTACAGGATaGAAGTCATACTACTGTCCT +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTTCITG*KSYYCP
Trigger: AGGACAGTAGTATGACTTCCATCCTGTAATGCACGT...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTAGACACAGGCAGGTTTaGGCGATGAATGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTRHRQV*AMNGKI
Trigger: TATTTTTCCATTCATCGCCCAAACCTGCCTGTGTCT...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTATTAAGCCAAAGCCATTaGCAGCCCTCTTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLLSQSH*QPSFLF
Trigger: AAAAAGGAAAGAGGGCTGCCAATGGCTTTGGCTTAA...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
3UTR CAA 72 bp AACAAGTGTGCCTCATGGTGGATTACTACAACCTTATaGCTGCAGTCCCATCCATTACCCAATTTCCATTAT +
Preference number: 4 (lower is better)
Translates to: NKCASWWITTTL*LQSHPLPNFHY
Trigger: ATAATGGAAATTGGGTAATGGATGGGACTGCAGCAATAAGGTTGTAGTAATCCACCATGAGGCACACTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GAATTGTCATTTTTGAGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCAGAATTGTCATTTTTaGGGAGGACTCAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: ELSFLRRTQCLASVPFWNQNCHF*GGLNVW
Trigger: CCAAACATTGAGTCCTCCTCAAAAATGACAATTCTG...GTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCTCAAAAATGACAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR TCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAATGGTGGTTTTATGTTTaGCATCCCAATGCATATACA +
Preference number: 4 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKWWFYV*HPNAYT
Trigger: TGTATATGCATTGGGATGTCAAACATAAAACCACCA...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCATGCTTAGTAACCACTaGTCAATGAGACAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGMLSNH*SMRQGS
Trigger: AGAACCTTGTCTCATTGATCAGTGGTTACTAAGCAT...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAGCCAGAGAGAACATATaGGTATCTCAGATTCAGTTA +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIARENI*VSQIQL
Trigger: TAACTGAATCTGAGATACTCATATGTTCTCTCTGGC...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAAGGTCTTCTGGCATGTaGGATGCATTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLRSSGM*DAFCFL
Trigger: AAGAAAACAAAATGCATCTCACATGCCAGAAGACCT...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCACTTGCACCACAAACCTaGATCTCTCTTAATTTAGGG +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKALAPQT*ISLNLG
Trigger: CCCTAAATTAAGAGAGATTCAGGTTTGTGGTGCAAG...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCTAGAAGCTGTAACCTaGAATGCTAGAATGAGCTTA +
Preference number: 4 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTLEAVT*NARMSL
Trigger: TAAGCTCATTCTAGCATTTCAGGTTACAGCTTCTAG...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATACTTTGGGATCTTACTTaGATTTCAAAGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFILWDLT*ISKTQA
Trigger: TGCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAG...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTTGGATGGGTAAGGTATaGTTCACTTTAACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTWMGKV*FTLTVA
Trigger: GGCTACAGTTAAAGTGAAGCATACCTTACCCATCCA...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGTCCTGCACTGAACAATaGTGTGATTATTCGATTTCA +
Preference number: 4 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLSCTEQ*CDYSIS
Trigger: TGAAATCGAATAATCACACCATTGTTCAGTGCAGGA...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACCTGGTAAAGGTCTTCTaGCATGTGAGATGCATTTTG +
Preference number: 4 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHLVKVF*HVRCIL
Trigger: CAAAATGCATCTCACATGCCAGAAGACCTTTACCAG...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTACGAGAGCATGCCTATTaGAGCACTTTCAGTACAATT +
Preference number: 4 (lower is better)
Translates to: NGVIIRFHRQLHSNTQSLREHAY*STFSTI
Trigger: AATTGTACTGAAAGTGCTCCAATAGGCATGCTCTCG...TAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGTCAGCTTGCTTTAAATaGGGCACCCTCCATAAACAA +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRSACFK*GTLHKQ
Trigger: TTGTTTATGGAGGGTGCCCCATTTAAAGCAAGCTGA...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACTTGCTCTTACAGATTTaGCTAACATGTCCCATTAAG +
Preference number: 4 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYLLLQI*LTCPIK
Trigger: CTTAATGGGACATGTTAGCCAAATCTGTAAGAGCAA...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCAACAAGTGTGCCTCATaGTGGATTACTACAACCTTA +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGNKCAS*WITTTL
Trigger: TAAGGTTGTAGTAATCCACCATGAGGCACACTTGTT...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCATATAATTGGATGCACTaGGTCCCTCTGAATTCCCTA +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKAYNWMH*VPLNSL
Trigger: TAGGGAATTCAGAGGGACCCAGTGCATCCAATTATA...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAAAGATGAGGTCATCCTaGATTAGGGTGGAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLKMRSS*IRVEVK
Trigger: TTTAACTTCCACCCTAATCCAGGATGACCTCATCTT...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR TCA 90 bp AATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAAAACTGATTTATTGTaGAAAGCCGTCAGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NGVIIRFHRQLHSNTQSLKTDLL*KAVSLW
Trigger: CCACAGACTGACGGCTTTTCACAATAAATCAGTTTT...TAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGGTGCTGTTGGAAGGATaGTTTCTAACGCCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRVLLEG*FLTPFY
Trigger: ATAAAAAGGCGTTAGAAAGCATCCTTCCAACAGCAC...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp AATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAACGGCTATTCGTCCATaGCTGACATTTATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: NGVIIRFHRQLHSNTQSLTAIRP*LTFIKA
Trigger: TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGT...TAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp ACTAGTTTGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACACGTTTGATTACAACATaGAATTTACAACACCTGGGA +
Preference number: 4 (lower is better)
Translates to: TSLGSCTEQWCDYSISQTRLITT*NLQHLG
Trigger: TCCCAGGTGTTGTAAATTGCATGTTGTAATCAAACG...TGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCAAACTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCAATAAAAACGTATGTTaGTCTCGTCTGCGTCATCAT +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGNKNVC*SRLRHH
Trigger: ATGATGACGCAGACGAGAGCAACATACGTTTTTATT...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAATTCGATGGTAGCAACTaGCAATTTTCCAAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKFDGSN*QFSKKF
Trigger: AAACTTTTTGGAAAATTGGCAGTTGCTACCATCGAA...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGTTAAGATTAGTCACTaGATGAGGAAGCGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFVKISH*MRKREN
Trigger: ATTTTCCCGCTTCCTCATGCAGTGACTAATCTTAAC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTTTCCAGATAAAAACGTaGTTCCCCCATATTGTCTAC +
Preference number: 4 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFFQIKT*FPHIVY
Trigger: GTAGACAATATGGGGGAACCACGTTTTTATCTGGAA...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTCCTGCACTGAACAATaGTGTGATTATTCGATTTCA +
Preference number: 4 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGSCTEQ*CDYSIS
Trigger: TGAAATCGAATAATCACACCATTGTTCAGTGCAGGA...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCAGCAATTTACAACACCTaGGACTACAACAGGACATTA +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKAAIYNT*DYNRTL
Trigger: TAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATTGC...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTGGGAAAGGCAGAGAATaGTCAATGCATACTGATTTT +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTGKGRE*SMHTDF
Trigger: AAAATCAGTATGCATTGACCATTCTCTGCCTTTCCC...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTACACATTACCTTCTGTaGTTCTTTCTTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTTHYLL*FFLHRV
Trigger: AACTCTGTGAAGAAAGAAGCACAGAAGGTAATGTGT...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCGTTTGATTACAACATaGAATTTACAACACCTGGGA +
Preference number: 4 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRRLITT*NLQHLG
Trigger: TCCCAGGTGTTGTAAATTGCATGTTGTAATCAAACG...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR GCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAAGGTTTAAATGTTaGTTTAAGAGCCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIKRFKC*FKSLAA
Trigger: AGCTGCAAGGCTCTTAAAGCAACATTTAAACCTTTT...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGTCAGTACAATTAAGCTaGAATGTCCTGACATTGAAT +
Preference number: 4 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLSVQLS*NVLTLN
Trigger: ATTCAATGTCAGGACATTCCAGCTTAATTGTACTGA...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATATACTTTTATCAGACCTaGGTGCAAATTCGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFIYFYQT*VQIRVY
Trigger: ATAAACTCGAATTTGCACCCAGGTCTGATAAAAGTA...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CCA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCATCCTGGATTAGGGTaGAAGTTAAATCTAATGACT +
Preference number: 4 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTHPGLG*KLNLMT
Trigger: AGTCATTAGATTTAACTTCCACCCTAATCCAGGATG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR GCA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCATTAGTCTATGATTTTTaGCCCATATCCATGTTAGAG +
Preference number: 4 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKALVYDF*PISMLE
Trigger: CTCTAACATGGATATGGGGCAAAAATCATAGACTAA...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS GCA 90 bp GCGCAGCGGCCTCTCAGTCCCGCCGGCTTAGGTAACCCAGGTCGCTaGGGTAACGCAGTGACCGCGCTCCAGGTCCGCGTCTCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: AQRPLSPAGLGNPGR*GNAVTALQVRVSCD
Trigger: ATCGCAAGAGACGCGGACCTGGAGCGCGGTCACTGCGTTACCGCAGCGACCTGGGTTACCTAAGCCGGCGGGACTGAGAGGCCGCTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS TCA 90 bp GCAAGGAGCCGCTCTTTGAGCGAGGTCATGCCGAGGATGGCCAGCTaGGCCTTGCGCTCCAGGGGCAGCACGGCCAGGATCCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: ARSRSLSEVMPRMAS*ALRSRGSTARIHQD
Trigger: GTCCTGGTGGATCCTGGCCGTGCTGCCCCTGGAGCGCAAGGCTCAGCTGGCCATCCTCGGCATGACCTCGCTCAAAGAGCGGCTCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGCTTCTTGGCTGCCGTTaGCCTTCTGCCCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAELLGCR*PSALRG
Trigger: GCCCCTCAGGGCAGAAGGCAAACGGCAGCCAAGAAG...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CCTGGGCAAAGGATCTGGGTGTTGGTCTCCAAAGCGCTGCAGGGATCCTCCGGCGAAGTCGGTCACTGGTaGAACTGTTCACAGTACAAA +
Preference number: 5 (lower is better)
Translates to: PGQRIWVLVSKALQGSSGEVGHW*NCSQYK
Trigger: TTTGTACTGTGAACAGTTCAACCAGTGACCGACTTC...GCCGGAGGATCCCTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AAAGGAGACCCCACGTCTCACATCCCAGAAGACATTGCCCAGCCCAGCAGCTCAAGCTGCACTGGCATCTaGGAGAGCTTGCTCATAGTT +
Preference number: 5 (lower is better)
Translates to: KGDPTSHIPEDIAQPSSSSCTGI*ESLLIV
Trigger: AACTATGAGCAAGCTCTCCAAGATGCCAGTGCAGCT...TGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGTGAGACGTGGGGTCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CATCTCAGGGGCCTCGCTGACCCAGGAGAAACTGCCCATCCCAGGGTGAGCCAAGAGAAATCCTTAGAATaGGCATCTCCCCAACAGAAA +
Preference number: 5 (lower is better)
Translates to: HLRGLADPGETAHPRVSQEKSLE*ASPQQK
Trigger: TTTCTGTTGGGGAGATGCCAATTCTAAGGATTTCTC...TTGGCTCACCCTGGGATGGGCAGTTTCTCCTGGGTCAGCGAGGCCCCTGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGCCGCTGCTGGCATGTTaGCACTTTGGCTGCACCACG +
Preference number: 5 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAEPLLAC*HFGCTT
Trigger: CGTGGTGCAGCCAAAGTGCAAACATGCCAGCAGCGG...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCCAGGTCCGCGTCTCTaGCGATGCTTCCCCCACTCG +
Preference number: 5 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLPGPRL*RCFPHS
Trigger: CGAGTGGGGGAAGCATCGCAAGAGACGCGGACCTGG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGAAGGAGGACTCAATGTTaGGCAAGCGTCCCATTTTGG +
Preference number: 5 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRRRTQC*ASVPFW
Trigger: CCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGATACATCCCAGAAGACATaGCCCAGCCCAGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: PTKCTSWLGQREHMSISDTSQKT*PSPAAH
Trigger: GTGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGT...ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AAAGGAGACCCCACGTCTCACATCCCAGAAGACATTGCCCAGCCCAGCAGCTCAACATTCTGGGGTCTATaGATCTTGTCACCACTGATG +
Preference number: 5 (lower is better)
Translates to: KGDPTSHIPEDIAQPSSSTFWGL*ILSPLM
Trigger: CATCAGTGGTGACAAGATCAATAGACCCCAGAATGT...TGAGCTGCTGGGCTGGGCAATGTCTTCTGGGATGTGAGACGTGGGGTCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACCACACCAAGGGGTGCTaGAAGGTCCAGGCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHHTKGC*KVQARP
Trigger: GGGGCGGGCCTGGACCTTCAAGCACCCCTTGGTGTG...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGACAGCTACTCAGAAGGTaGAGGCAGGACAATCCTTTG +
Preference number: 5 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRQLLRR*RQDNPL
Trigger: CAAAGGATTGTCCTGCCTCAACCTTCTGAGTAGCTG...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS TCA 90 bp TGTTATAGCCATCTCTGTGGCGGTGGCTTAGCACTCGGAACCGACTaGTGCCAATCGCGTCTACAACAGAACTTCCATCAGGAAACGTTC +
Preference number: 5 (lower is better)
Translates to: CYSHLCGGGLALGTD*CQSRLQQNFHQETF
Trigger: GAACGTTTCCTGATGGAAGTTCTGTTGTAGACGCGATTGGCATCAGTCGGTTCCGAGTGCTAAGCCACCGCCACAGAGATGGCTATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTGCAAGGAGCCGCTCTTaGAGCGAGGTCATGCCGAGG +
Preference number: 5 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTARSRS*SEVMPR
Trigger: CCTCGGCATGACCTCGCTCAAAGAGCGGCTCCTTGC...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ATGTTGCAAACTCCATCTTCATCCTTCAAAGGTCACATGCGCCAACCAGCCGAGCGATACGGGACCCACTaGAGCCTAAACTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: MLQTPSSSFKGHMRQPAERYGTH*SLNFHQ
Trigger: TTGGTGGAAGTTTAGGCTCAAGTGGGTCCCGTATCG...CTCGGCTGGTTGGCGCATGTGACCTTTGAAGGATGAAGATGGAGTTTGCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCCATGGGCACTCCTGTaGGTGCCCTCAGAGACCCCT +
Preference number: 5 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTPWALL*VPSETP
Trigger: AGGGGTCTCTGAGGGCACCAACAGGAGTGCCCATGG...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGGGGGCACATACACCTTaGCAGGCCACCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLGAHTP*QATHRE
Trigger: CTCCCTGTGGGTGGCCTGCAAAGGTGTATGTGCCCC...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS TCA 90 bp TCTTTCATGCGATCCTGGAGAGACGCGAACCAGGAAACAGACTGTTaGTGCACAGAATCGTGGAGAGCGGCAAGTTCTTCATACTCTGGA +
Preference number: 5 (lower is better)
Translates to: SFMRSWRDANQETDC*CTESWRAASSSYSG
Trigger: TCCAGAGTATGAAGAACTTGCCGCTCTCCACGATTCTGTGCATCAACAGTCTGTTTCCTGGTTCGCGTCTCTCCAGGATCGCATGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CCA 90 bp GTGCATCCTCCACGTCATCCGGAAACTGTCTCTTTAAGCCAGCGCTaGGTGCTGTTGGAAGGATGCTTTCTAACGCCTTTTTATCCTCTT +
Preference number: 5 (lower is better)
Translates to: VHPPRHPETVSLSQR*VLLEGCFLTPFYPL
Trigger: AAGAGGATAAAAAGGCGTTAGAAAGCATCCTTCCAACAGCACCCAGCGCTGGCTTAAAGAGACAGTTTCCGGATGACGTGGAGGATGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCACATGCCAAACCGCTaGGTGCCAGTTTCCATGCAT +
Preference number: 5 (lower is better)
Translates to: LIHKHLMKHNEWTAIRPCHMPNR*VPVSMH
Trigger: ATGCATGGAAACTGGCACCAAGCGGTTTGGCATGTG...GCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTGGGTAAGGACTAGTTaGGGCTCCTGCACTGAACAA +
Preference number: 5 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHWVRTS*GSCTEQ
Trigger: TTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCA...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACCCATTAAGTGTCTACTaGCACAGCTTCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHPLSVY*HSFLAA
Trigger: GGCAGCCAAGAAGCTGTGCAAGTAGACACTTAATGG...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACATAGAGACCAGTGGCTaGAGGTTTGAGGAAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHIETSG*RFEEKG
Trigger: CCCCTTTTCCTCAAACCTCAAGCCACTGGTCTCTAT...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTGGCATGCCTCGCCTCTaGGCTGCGCGTGGCTTACTA +
Preference number: 5 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTGMPRL*AARGLL
Trigger: TAGTAAGCCACGCGCAGCCAAGAGGCGAGGCATGCC...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CCTTGCAGCTGTTGTGACTCATTCCTCAATCCGGTGGGATGCAAAGGATCTATCATCAGAATGTGGCCTTaGGGAAGGACGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PCSCCDSFLNPVGCKGSIIRMWP*GRTMLK
Trigger: CTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT...GATAGATCCTTTGCATCCCACCGGATTGAGGAATGAGTCACAACAGCTGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCAAAGGATCTGGGTGTaGGTCTCCAAAGCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLQRIWV*VSKALQ
Trigger: CTGCAGCGCTTTGGAGACCAACACCCAGATCCTTTG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACGAGCTCATTCAGTCCTaGGTGCTGCAGACTAGGGTG +
Preference number: 5 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHELIQS*VLQTRV
Trigger: CACCCTAGTCTGCAGCACCAAGGACTGAATGAGCTC...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTACGCCCATCTTCGCCTTaGCCATGGAGACACAGTGGA +
Preference number: 5 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLRPSSP*PWRHSG
Trigger: TCCACTGTGTCTCCATGGCAAAGGCGAAGATGGGCG...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS GCA 90 bp CCGGAAACTGTCTCTTTAAGCCAGCGCTGGGTGCTGTTGGAAGGATaGTTTCTAACGCCTTTTTATCCTCTTCAAAGTGTAGACCCAGTA +
Preference number: 5 (lower is better)
Translates to: PETVSLSQRWVLLEG*FLTPFYPLQSVDPV
Trigger: TACTGGGTCTACACTTTGAAGAGGATAAAAAGGCGTTAGAAAGCATCCTTCCAACAGCACCCAGCGCTGGCTTAAAGAGACAGTTTCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp TGGAACCTCATCCACAAGCACTTGATGAAGCACAATGAATGGACGGCTATTCGTAGCTGCACTGGCATCTaGGAGAGCTTGCTCATAGTT +
Preference number: 5 (lower is better)
Translates to: WNLIHKHLMKHNEWTAIRSCTGI*ESLLIV
Trigger: AACTATGAGCAAGCTCTCCAAGATGCCAGTGCAGCT...ACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAGGTTCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTCTCATCCACAAGCACTaGATGAAGCACAATGAATGG +
Preference number: 5 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSLIHKH*MKHNEW
Trigger: CCATTCATTGTGCTTCATCAAGTGCTTGTGGATGAG...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGATCTCTTAGAAATCACTaGGCCAAACTGCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRSLRNH*AKLPLN
Trigger: GTTTAATGGCAGTTTGGCCAAGTGATTTCTAAGAGA...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AACACGCAAAGCCTAAGCGTAGTTTTGGTTAGCCTGTGTTCTAAGAAATCCACTGTTTATGTCCCCAACTaGGGGGAGTGCAATGGTGGC +
Preference number: 5 (lower is better)
Translates to: NTQSLSVVLVSLCSKKSTVYVPN*GECNGG
Trigger: GCCACCATTGCACTCCCCCAAGTTGGGGACATAAAC...AGTGGATTTCTTAGAACACAGGCTAACCAAAACTACGCTTAGGCTTTGCGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CAGGGTCCTGTGCTGTCAGTGAACTGCATTCCCCAAGCACCTGCTTCTAAGAGAGGGCACATGACATGTTaGCTGTTCTTCCTTTTAATA +
Preference number: 5 (lower is better)
Translates to: QGPVLSVNCIPQAPASKRGHMTC*LFFLLI
Trigger: TATTAAAAGGAAGAACAGCAAACATGTCATGTGCCC...TCTCTTAGAAGCAGGTGCTTGGGGAATGCAGTTCACTGACAGCACAGGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTGGTGCCTATTGGCTTTaGTGTCTCCATAACTTAGGT +
Preference number: 5 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSGAYWL*CLHNLG
Trigger: ACCTAAGTTATGGAGACACAAAAGCCAATAGGCACC...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCTTGAGCCCAGGAATTaGAGACCAGCTTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLLEPRN*RPAWAT
Trigger: TGTTGCCCAAGCTGGTCTCAAATTCCTGGGCTCAAG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCAGGCATCTTGGAGAGCTaGCTCATAGTTCTTCATGGT +
Preference number: 5 (lower is better)
Translates to: MFGKRPILEPHPQALDEAGILES*LIVLHG
Trigger: ACCATGAAGAACTATGAGCAAGCTCTCCAAGATGCC...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACCGTCTCTGGTCAGATTaGACAGTTCTGACATTTCTT +
Preference number: 5 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHRLWSD*TVLTFL
Trigger: AAGAAATGTCAGAACTGTCAAATCTGACCAGAGACG...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCACATGCCAAACCGCTaGGTGCCAGTTTCCATGCAT +
Preference number: 5 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTHMPNR*VPVSMH
Trigger: ATGCATGGAAACTGGCACCAAGCGGTTTGGCATGTG...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCCAGGAAACAGACTGTaGATGCACAGAATCGTGGAG +
Preference number: 5 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYPGNRL*MHRIVE
Trigger: CTCCACGATTCTGTGCATCAACAGTCTGTTTCCTGG...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACGGCATTAGCCAGCTCTaGCCGACTATTCATCTTACG +
Preference number: 5 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYGISQL*PTIHLT
Trigger: CGTAAGATGAATAGTCGGCAAGAGCTGGCTAATGCC...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGAGGAGGACTCAATGTTaGGCAAGCGTCCCATTTTGG +
Preference number: 5 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLRRTQC*ASVPFW
Trigger: CCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCCCTGTGAGCTTGTGTaGGATGAGAGTCTGATAACC +
Preference number: 5 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLPCELV*DESLIT
Trigger: GGTTATCAGACTCTCATCCAACACAAGCTCACAGGG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACGAATTTGAGACCAGCTaGGGCAACACAGCTAGACCT +
Preference number: 5 (lower is better)
Translates to: PDKNVVPPYCLHTKARLYEFETS*GNTARP
Trigger: AGGTCTAGCTGTGTTGCCCAAGCTGGTCTCAAATTC...GTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ACAGATACCCCAAATCCAAATCTAAATCACATCTCTCCACAGGTGCTACAGCTGCTTCTGTCTCAGAGTTaGGGCTCCTTTGAAGTGAGA +
Preference number: 5 (lower is better)
Translates to: TDTPNPNLNHISPQVLQLLLSQS*GSFEVR
Trigger: TCTCACTTCAAAGGAGCCCAAACTCTGAGACAGAAG...CAGCTGTAGCACCTGTGGAGAGATGTGATTTAGATTTGGATTTGGGGTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGGCAAGCGTCCCATTTaGGAACCTCATCCACAAGCA +
Preference number: 5 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFGKRPI*EPHPQA
Trigger: TGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGTGGGTAAGGACTAGTTaGGGCTCCTGCACTGAACAA +
Preference number: 5 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTWVRTS*GSCTEQ
Trigger: TTGTTCAGTGCAGGAGCCCAAACTAGTCCTTACCCA...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTAAATGCACCAGCTGGTaGGGCCAGAGAGAACATATG +
Preference number: 5 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSKCTSW*GQREHM
Trigger: CATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTT...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCAACGAGAGCATGCCTATaGGAGCACTTTCAGTACAAT +
Preference number: 5 (lower is better)
Translates to: MFGKRPILEPHPQALDEATRACL*EHFQYN
Trigger: ATTGTACTGAAAGTGCTCCAATAGGCATGCTCTCGT...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGTGGCATGTTTGCACTTaGGCTGCACCACGTATGCTG +
Preference number: 5 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRWHVCT*AAPRML
Trigger: CAGCATACGTGGTGCAGCCAAAGTGCAAACATGCCA...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTGTCCATCTCCTCGATTaGACTCTTCCACTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRVHLLD*TLPLQK
Trigger: CTTCTGCAGTGGAAGAGTCAAATCGAGGAGATGGAC...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATCAGAATGTGGCCTTTGGGAAGGACGATGTTGAAGGGGAAGAACTCCTTCCACCACATCTGCACTGTGTaGAATACTGTTCCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: IRMWPLGRTMLKGKNSFHHICTV*NTVPLK
Trigger: TTTTAGAGGAACAGTATTCAACACAGTGCAGATGTG...GTGGAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAAAGGCCACATTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS CCA 90 bp GACAAGCTGCACTGGCATCTTGGAGAGCTTGCTCATAGTTCTTCATaGTCAAATATAACTCCGCCCGCAGCAGCAATAATGAATTATCAT +
Preference number: 5 (lower is better)
Translates to: DKLHWHLGELAHSSS*SNITPPAAAIMNYH
Trigger: ATGATAATTCATTATTGCTGCTGCGGGCGGAGTTATATTTGACCATGAAGAACTATGAGCAAGCTCTCCAAGATGCCAGTGCAGCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCAGTGAGAGATCTTTCTaGGGAATTTTTCCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: IYNTWDYNRTLNTVLSRGSERSF*GIFPGA
Trigger: CGCCCCTGGAAAAATTCCCAAGAAAGATCTCTCACT...GCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CACTTGATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAGTGAGAGATCTTTCTaGGGAATTTTTCCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: HLMKHNEWTAIRPCLTFISERSF*GIFPGA
Trigger: CGCCCCTGGAAAAATTCCCAAGAAAGATCTCTCACT...TATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCATCAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp GATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTCTTCTGTCTCAGAGTTaGGGCTCCTTTGAAGTGAGA +
Preference number: 5 (lower is better)
Translates to: DYSISQTTSQQHAKPKRSLLSQS*GSFEVR
Trigger: TCTCACTTCAAAGGAGCCCAAACTCTGAGACAGAAG...ACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp GCCAGTCTTAGCTATTTCCCTGCCCTTTCCTGCAGAACATACAGTAGAGGGTCTAATAATTCCGAAAGTTaGTCTTTGCACAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: ASLSYFPALSCRTYSRGSNNSES*SLHKGQ
Trigger: CTGTCCTTTGTGCAAAGACAAACTTTCGGAATTATT...AGACCCTCTACTGTATGTTCTGCAGGAAAGGGCAGGGAAATAGCTAAGACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTCCAGGAAACAGACTGTaGATGCACAGAATCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTPGNRL*MHRIVE
Trigger: CTCCACGATTCTGTGCATCAACAGTCTGTTTCCTGG...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAGGCATTAGCCAGCTCTaGCCGACTATTCATCTTACG +
Preference number: 5 (lower is better)
Translates to: NGVIIRFHRQLHSNTQSLGISQL*PTIHLT
Trigger: CGTAAGATGAATAGTCGGCAAGAGCTGGCTAATGCC...TAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACACAGAATTGTCATTTTaGAGGAGGACTCAATGTTTG +
Preference number: 5 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHTELSF*RRTQCL
Trigger: CAAACATTGAGTCCTCCTCAAAAATGACAATTCTGT...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AGGAGGACTCAATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACGAGTTGAGATACAATTaGTTAAACAGTCTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: RRTQCLASVPFWNLIHKHELRYN*LNSLGV
Trigger: CACACCAAGACTGTTTAACAAATTGTATCTCAACTC...GTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACATTGAGTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGTTGGGAAGGACGATGTaGAAGGGGAAGAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRLGRTM*KGKNSF
Trigger: GAAGGAGTTCTTCCCCTTCAACATCGTCCTTCCCAA...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGACCCTTGTTTCTCCATaGAACAGCCCAATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLTLVSP*NSPIFP
Trigger: AGGAAAGATTGGGCTGTTCAATGGAGAAACAAGGGT...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS GCA 90 bp AGAGAGAAAAATCAATTATTTCTCTCCCTGGCATTAGCCAGCTCTTaGCGACTATTCATCTTACGCGTGATGATGACTAATATCCGTCGG +
Preference number: 5 (lower is better)
Translates to: REKNQLFLSLALASS*RLFILRVMMTNIRR
Trigger: CCGACGGATATTAGTCATCATCACGCGTAAGATGAATAGTCGGCAAGAGCTGGCTAATGCCAGGGAGAGAAATAATTGATTTTTCTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp TATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGGCATCTTGGAGAGCTaGCTCATAGTTCTTCATGGT +
Preference number: 5 (lower is better)
Translates to: YSISQTTSQQHAKPKRSFGILES*LIVLHG
Trigger: ACCATGAAGAACTATGAGCAAGCTCTCCAAGATGCC...AAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp TGGGCTCCTGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACCGTCTCTGGTCAGATTaGACAGTTCTGACATTTCTT +
Preference number: 5 (lower is better)
Translates to: WAPALNNGVIIRFHRQLHRLWSD*TVLTFL
Trigger: AAGAAATGTCAGAACTGTCAAATCTGACCAGAGACG...GTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCAGGAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTCCACCAGACACAGAATaGTCATTTTTGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRPPDTE*SFLRRT
Trigger: AGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGG...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGCCTTTGGGATCTTACTaGCATTTCAAAGACACAGGC +
Preference number: 5 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLPLGSY*HFKDTG
Trigger: GCCTGTGTCTTTGAAATGCAAGTAAGATCCCAAAGG...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGATAACTTCAACTGTTCCTaGATGATTCAAATGTCCTGT +
Preference number: 5 (lower is better)
Translates to: PTKCTSWLGQREHMSISDNFNCS*MIQMSC
Trigger: ACAGGACATTTGAATCATCAAGGAACAGTTGAAGTT...ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp CCAACCAAATGCACCAGCTGGTTGGGCCAGAGAGAACATATGAGTATCTCAGATTATAGAATTCAGCAGTaGAGAAGTGAAAGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: PTKCTSWLGQREHMSISDYRIQQ*RSESQG
Trigger: ACCTTGACTTTCACTTCTCAACTGCTGAATTCTATA...ATCTGAGATACTCATATGTTCTCTCTGGCCCAACCAGCTGGTGCATTTGGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTTTTAAGCCAAAGCCATaGGCAGCCCTCTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRFKPKP*AALFPF
Trigger: AAAAGGAAAGAGGGCTGCCAATGGCTTTGGCTTAAA...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS GCA 90 bp TTTTACTTGATGTCCCTTAATCAAGAGAGGTTCATTCTGACAAGCTaGACTGGCATCTTGGAGAGCTTGCTCATAGTTCTTCATGGTCAA +
Preference number: 5 (lower is better)
Translates to: FYLMSLNQERFILTS*TGILESLLIVLHGQ
Trigger: TTGACCATGAAGAACTATGAGCAAGCTCTCCAAGATGCCAGTGCAGCTTGTCAGAATGAACCTCTCTTGATTAAGGGACATCAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGAGCCTGAGCTTTTACTaGATGTCCCTTAATCAAGAG +
Preference number: 5 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLSLSFY*MSLNQE
Trigger: CTCTTGATTAAGGGACATCAAGTAAAAGCTCAGGCT...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCACCACCAGACACAGAATaGTCATTTTTGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKAPPDTE*SFLRRT
Trigger: AGTCCTCCTCAAAAATGACAATTCTGTGTCTGGTGG...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CTAAGAAATCCACTTCCAGATAAAAACGTGGTTCCCCCATATTGTCTACACACTAGCCTAAGCGTAGTTTaGGTTAGCCTGTGTTCTAAG +
Preference number: 5 (lower is better)
Translates to: LRNPLPDKNVVPPYCLHTSLSVV*VSLCSK
Trigger: CTTAGAACACAGGCTAACCAAAACTACGCTTAGGCT...AGTGTGTAGACAATATGGGGGAACCACGTTTTTATCTGGAAGTGGATTTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGAGCCTAAGCGTAGTTTaGGTTAGCCTGTGTTCTAAG +
Preference number: 5 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRSLSVV*VSLCSK
Trigger: CTTAGAACACAGGCTAACCAAAACTACGCTTAGGCT...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAATCGTCTGCGTCATCATaGTTGTTCAGACTTTTACAT +
Preference number: 5 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKSSASS*LFRLLH
Trigger: ATGTAAAAGTCTGAACAACAATGATGACGCAGACGA...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCAAAGACACAGGCAGGTTaGGGCGATGAATGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKAKTQAG*GDEWKN
Trigger: ATTTTTCCATTCATCGCCCAAACCTGCCTGTGTCTT...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGTTCAGAAAGCTGCCTTaGGGATCTTACTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTFRKLP*GSYLHF
Trigger: GAAATGCAAGTAAGATCCCAAAGGCAGCTTTCTGAA...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGATTACTACAACCTTATaGCTGCAGTCCCATCCATTA +
Preference number: 5 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLITTTL*LQSHPL
Trigger: TAATGGATGGGACTGCAGCAATAAGGTTGTAGTAAT...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATGTTTGGCAAGCGTCCCATTTTGGAACCTCATCCACAAGCACTTGATGAAGCAGAAAAACCTACTCATTaGAGACTACAAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: MFGKRPILEPHPQALDEAEKPTH*RLQTSS
Trigger: AGAAGAGGTTTGTAGTCTCAAATGAGTAGGTTTTTC...TGCTTCATCAAGTGCTTGTGGATGAGGTTCCAAAATGGGACGCTTGCCAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AAAAACGTGGTTCCCCCATATTGTCTACACACTAAAGCACGCCTTTACCATCTGTTAGAGATACTCATGTaGCAAACTCCATCTTCATCC +
Preference number: 5 (lower is better)
Translates to: KNVVPPYCLHTKARLYHLLEILM*QTPSSS
Trigger: GGATGAAGATGGAGTTTGCAACATGAGTATCTCTAA...CAGATGGTAAAGGCGTGCTTTAGTGTGTAGACAATATGGGGGAACCACGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACAGCCTGAGCTTTTACTaGATGTCCCTTAATCAAGAG +
Preference number: 5 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHSLSFY*MSLNQE
Trigger: CTCTTGATTAAGGGACATCAAGTAAAAGCTCAGGCT...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp CTAGGACCCCAATCTCCAACTGTCCATTATAAACACCTGACAAGCTCAGCAAAAGAAGCTGTGATCACATaGTGGTTATTTAGATACTTC +
Preference number: 5 (lower is better)
Translates to: LGPQSPTVHYKHLTSSAKEAVIT*WLFRYF
Trigger: GAAGTATCTAAATAACCACAATGTGATCACAGCTTC...TTTTGCTGAGCTTGTCAGGTGTTTATAATGGACAGTTGGAGATTGGGGTCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp GCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGATATTTTATGATATTTaGACATCTCAGGGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: ALNNGVIIRFHRQLHSNTIFYDI*TSQGPR
Trigger: GCGAGGCCCCTGAGATGTCAAAATATCATAAAATAT...CGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp AATTTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCCGTGGGAGATAACTTaGTCCCAGATATTAAAACCT +
Preference number: 5 (lower is better)
Translates to: NLQHLGLQQDIKHSSIQRPWEIT*SQILKP
Trigger: AGGTTTTAATATCTGGGACAAAGTTATCTCCCACGG...CCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTAGTTTTGAATAATTCCGAAAGTTaGTCTTTGCACAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: IRFHRQLHSNTQSLSVVLNNSES*SLHKGQ
Trigger: CTGTCCTTTGTGCAAAGACAAACTTTCGGAATTATT...CAAAACTACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp TGTGATTATTCGATTTCACAGACAACTTCACAGCAACACGCAAAGCCTAAGCGTGCTAAAATGTACCCATaGACAAAGCTTCATAGTCTT +
Preference number: 5 (lower is better)
Translates to: CDYSISQTTSQQHAKPKRAKMYP*TKLHSL
Trigger: AAGACTATGAAGCTTTGTCAATGGGTACATTTTAGC...ACGCTTAGGCTTTGCGTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp TTACAACACCTGGGACTACAACAGGACATTAAACACAGTTCTATCCAGAGGCTAGAGGTTTTCCCAGATTaGACAACCATCCTATTTAAA +
Preference number: 5 (lower is better)
Translates to: LQHLGLQQDIKHSSIQRLEVFPD*TTILFK
Trigger: TTTAAATAGGATGGTTGTCAAATCTGGGAAAACCTC...TAGCCTCTGGATAGAACTGTGTTTAATGTCCTGTTGTAGTCCCAGGTGTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCAACAGAATTGTCATTTTaGAGGAGGACTCAATGTTTG +
Preference number: 5 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKATELSF*RRTQCL
Trigger: CAAACATTGAGTCCTCCTCAAAAATGACAATTCTGT...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS-3UTR CAA 90 bp TGCACTGAACAATGGTGTGATTATTCGATTTCACAGACAACTTCACAGCAACACAAGCATTCTTTGCACTaGGTGGTTTTATGTTTGACA +
Preference number: 5 (lower is better)
Translates to: CTEQWCDYSISQTTSQQHKHSLH*VVLCLT
Trigger: TGTCAAACATAAAACCACCAAGTGCAAAGAATGCTT...GTGTTGCTGTGAAGTTGTCTGTGAAATCGAATAATCACACCATTGTTCAGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS-3UTR CAA 90 bp ATGAAGCACAATGAATGGACGGCTATTCGTCCATGCCTGACATTTATAAAAGCACCTACTAAAATTAAATaGGAATCGTTCCACATCTGC +
Preference number: 5 (lower is better)
Translates to: MKHNEWTAIRPCLTFIKAPTKIK*ESFHIC
Trigger: GCAGATGTGGAACGATTCCAATTTAATTTTAGTAGG...TGCTTTTATAAATGTCAGGCATGGACGAATAGCCGTCCATTCATTGTGCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS GCA 72 bp GGCCGGGACAGGCACCGCGGGCGCAATCTGAGCCCCTaGCCACGCGCAGCGGCCTCTCAGTCCCGCCGGCTT +
Preference number: 6 (lower is better)
Translates to: GRDRHRGRNLSP*PRAAASQSRRL
Trigger: AAGCCGGCGGGACTGAGAGGCCGCTGCGCGTGGGCAGGGGCTCAGATTGCGCCCGCGGTGCCTGTCCCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS GCA 72 bp CGCAGTGACCGCGCTCCAGGTCCGCGTCTCTTGCGATaGTTCCCCCACTCGCCTGAGGGCTCCTGCGCGACT +
Preference number: 6 (lower is better)
Translates to: RSDRAPGPRLLR*FPHSPEGSCAT
Trigger: AGTCGCGCAGGAGCCCTCAGGCGAGTGGGGGAAGCATCGCAAGAGACGCGGACCTGGAGCGCGGTCACTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS GCA 72 bp CCTCTCAGTCCCGCCGGCTTAGGTAACCCAGGTCGCTaGGGTAACGCAGTGACCGCGCTCCAGGTCCGCGTC +
Preference number: 6 (lower is better)
Translates to: PLSPAGLGNPGR*GNAVTALQVRV
Trigger: GACGCGGACCTGGAGCGCGGTCACTGCGTTACCGCAGCGACCTGGGTTACCTAAGCCGGCGGGACTGAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393437.8
CDS TCA 72 bp CGCTCTTTGAGCGAGGTCATGCCGAGGATGGCCAGCTaGGCCTTGCGCTCCAGGGGCAGCACGGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: RSLSEVMPRMAS*ALRSRGSTARI
Trigger: GATCCTGGCCGTGCTGCCCCTGGAGCGCAAGGCTCAGCTGGCCATCCTCGGCATGACCTCGCTCAAAGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS TCA 72 bp CATCTCTGTGGCGGTGGCTTAGCACTCGGAACCGACTaGTGCCAATCGCGTCTACAACAGAACTTCCATCAG +
Preference number: 6 (lower is better)
Translates to: HLCGGGLALGTD*CQSRLQQNFHQ
Trigger: CTGATGGAAGTTCTGTTGTAGACGCGATTGGCATCAGTCGGTTCCGAGTGCTAAGCCACCGCCACAGAGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CCA 72 bp ATGGGACCGTGGGGAAGGCCATGGCACACACAAAGATaGGGACGTCTCTGGTCAGATTTGACAGTTCTGACA +
Preference number: 6 (lower is better)
Translates to: MGPWGRPWHTQR*GRLWSDLTVLT
Trigger: TGTCAGAACTGTCAAATCTGACCAGAGACGTCCCCATCTTTGTGTGTGCCATGGCCTTCCCCACGGTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CAA 72 bp GCGATCCTGGAGAGACGCGAACCAGGAAACAGACTGTaGATGCACAGAATCGTGGAGAGCGGCAAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: AILERREPGNRL*MHRIVESGKFF
Trigger: GAAGAACTTGCCGCTCTCCACGATTCTGTGCATCAACAGTCTGTTTCCTGGTTCGCGTCTCTCCAGGATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS TCA 72 bp CGATCCTGGAGAGACGCGAACCAGGAAACAGACTGTTaGTGCACAGAATCGTGGAGAGCGGCAAGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: RSWRDANQETDC*CTESWRAASSS
Trigger: TGAAGAACTTGCCGCTCTCCACGATTCTGTGCATCAACAGTCTGTTTCCTGGTTCGCGTCTCTCCAGGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS GCA 72 bp ACTCTGAAAGCCCCGCGTGCTCAGCAGATAAACACATaGCAAACCGCTTGGTGCCAGTTTCCATGCATCTTC +
Preference number: 6 (lower is better)
Translates to: TLKAPRAQQINT*QTAWCQFPCIF
Trigger: GAAGATGCATGGAAACTGGCACCAAGCGGTTTGGCATGTGTTTATCTGCTGAGCACGCGGGGCTTTCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CCA 72 bp CCACGTCATCCGGAAACTGTCTCTTTAAGCCAGCGCTaGGTGCTGTTGGAAGGATGCTTTCTAACGCCTTTT +
Preference number: 6 (lower is better)
Translates to: PRHPETVSLSQR*VLLEGCFLTPF
Trigger: AAAAGGCGTTAGAAAGCATCCTTCCAACAGCACCCAGCGCTGGCTTAAAGAGACAGTTTCCGGATGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CAA 90 bp TTCTTTCATGCGATCCTGGAGAGACGCGAACCAGGAAACAGACTGTaGATGCACAGAATCGTGGAGAGCGGCAAGTTCTTCATACTCTGG +
Preference number: 6 (lower is better)
Translates to: FFHAILERREPGNRL*MHRIVESGKFFILW
Trigger: CCAGAGTATGAAGAACTTGCCGCTCTCCACGATTCTGTGCATCAACAGTCTGTTTCCTGGTTCGCGTCTCTCCAGGATCGCATGAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS GCA 72 bp AGTTTCTGCTTGCCAATAATTCCGAAAGTTTGTCTTTaGACAAAGGACAGTGTGGGGCGTGGTCAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SFCLPIIPKVCL*TKDSVGRGQGS
Trigger: GCTGCCTTGACCACGCCCCACACTGTCCTTTGTGCAAAGACAAACTTTCGGAATTATTGGCAAGCAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CAA 90 bp CCACGTCATCCGGAAACTGTCTCTTTAAGCCAGCGCTGGGTGCTGTaGGAAGGATGCTTTCTAACGCCTTTTTATCCTCTTCAAAGTGTA +
Preference number: 6 (lower is better)
Translates to: PRHPETVSLSQRWVL*EGCFLTPFYPLQSV
Trigger: TACACTTTGAAGAGGATAAAAAGGCGTTAGAAAGCATCCTTCCAACAGCACCCAGCGCTGGCTTAAAGAGACAGTTTCCGGATGACGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CCA 72 bp CACTGGCATCTTGGAGAGCTTGCTCATAGTTCTTCATaGTCAAATATAACTCCGCCCGCAGCAGCAATAATG +
Preference number: 6 (lower is better)
Translates to: HWHLGELAHSSS*SNITPPAAAIM
Trigger: CATTATTGCTGCTGCGGGCGGAGTTATATTTGACCATGAAGAACTATGAGCAAGCTCTCCAAGATGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CAA 72 bp AAGTTTCTGCTTGCCAATAATTCCGAAAGTTTGTCTTaGCACAAAGGACAGTGTGGGGCGTGGTCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: KFLLANNSESLS*HKGQCGAWSRQ
Trigger: CTGCCTTGACCACGCCCCACACTGTCCTTTGTGCAAAGACAAACTTTCGGAATTATTGGCAAGCAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS CAA 72 bp CAAGAGAGGTTCATTCTGACAAGCTGCACTGGCATCTaGGAGAGCTTGCTCATAGTTCTTCATGGTCAAATA +
Preference number: 6 (lower is better)
Translates to: QERFILTSCTGI*ESLLIVLHGQI
Trigger: TATTTGACCATGAAGAACTATGAGCAAGCTCTCCAAGATGCCAGTGCAGCTTGTCAGAATGAACCTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1
CDS GCA 72 bp AATCAATTATTTCTCTCCCTGGCATTAGCCAGCTCTTaGCGACTATTCATCTTACGCGTGATGATGACTAAT +
Preference number: 6 (lower is better)
Translates to: NQLFLSLALASS*RLFILRVMMTN
Trigger: ATTAGTCATCATCACGCGTAAGATGAATAGTCGGCAAGAGCTGGCTAATGCCAGGGAGAGAAATAATTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393437.8
ENST00000409647.1