Pregenerated sensors for LNCPRESS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000249152

Ensembl transcript IDs: ENST00000502518.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTAGTTAGTGTCATAATATCACAGACCCAGGCTTCTGATTCAAACTaGGAGTTGTTTTCAATATGCTACACTATCTGCTTACATACCCCA	+
Preference number: 5 (lower is better) Translates to: LVSVIISQTQASDSN*ELFSICYTICLHTP Trigger: TGGGGTATGTAAGCAGATAGTGTAGCATATTGAAAACAACTCTCAGTTTGAATCAGAAGCCTGGGTCTGTGATATTATGACACTAACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502518.1
CDS CAA 72 bp	AAAGTATGGCCTCCAACTAGCAGCACCTTCATCACCTaGGAGCTTTTTAGAAGTGCTGAATCTCAGGTACCA	+
Preference number: 6 (lower is better) Translates to: KVWPPTSSTFIT*ELFRSAESQVP Trigger: TGGTACCTGAGATTCAGCACTTCTAAAAAGCTCCAAGGTGATGAAGGTGCTGCTAGTTGGAGGCCATACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502518.1
CDS GCA 72 bp	GATTTTCATAGCGATCCCCTTCTAATTTCTTTATCGTaGCTCACCTTGTTTGGTCCTCAATCCCAAATAATT	+
Preference number: 6 (lower is better) Translates to: DFHSDPLLISLS*LTLFGPQSQII Trigger: AATTATTTGGGATTGAGGACCAAACAAGGTGAGGCACGATAAAGAAATTAGAAGGGGATCGCTATGAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502518.1
CDS CCA 72 bp	TCCCCTTCTAATTTCTTTATCGTGCCTCACCTTGTTTaGTCCTCAATCCCAAATAATTATAAATTTCCAAGC	+
Preference number: 6 (lower is better) Translates to: SPSNFFIVPHLV*SSIPNNYKFPS Trigger: GCTTGGAAATTTATAATTATTTGGGATTGAGGACCAAACAAGGTGAGGCACGATAAAGAAATTAGAAGGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502518.1

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