RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMAN2L (Homo sapiens)

Ensembl gene IDs: ENSG00000114988

Ensembl transcript IDs: ENST00000264963.9, ENST00000377079.8, ENST00000434524.5, ENST00000434865.5, ENST00000440610.5, ENST00000446780.5, ENST00000449221.5, ENST00000474494.1, ENST00000480869.1

Found 710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAAAGCAGAAAGCCATCTCCCTAGGGCCACCTAATGAAGGCCAGTaGAACGCAGGTGTGTTCTGCAGCCCCAGGCCCCAACAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: PKQKAISLGPPNEGQ*NAGVFCSPRPQQRG
Trigger: GCCTCTCTGTTGGGGCCTGGGGCTGCAGAACACACCTGCGTTTCACTGGCCTTCATTAGGTGGCCCTAGGGAGATGGCTTTCTGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR TCA 90 bp GGCTGCATGCTCAGGCCAGTGCCTGCTCCTTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCG +
Preference number: 1 (lower is better)
Translates to: GCMLRPVPAPSIPHG*QSQKWWQQEGSVEA
Trigger: CGCTTCTACTGAGCCCTCCTGCTGCCACCACTTTTGTGACTGTCACCCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR CCA 90 bp GACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTaGCTTCCCAGACCAGAGTTAGATGTCCCCATGCACAACCATGGG +
Preference number: 1 (lower is better)
Translates to: DCRERHITAALPWGG*LPRPELDVPMHNHG
Trigger: CCCATGGTTGTGCATGGGGACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR CCA 90 bp GAAGGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGAGTTAGATGTCCCCATGCACAACCA +
Preference number: 1 (lower is better)
Translates to: EGLQGKAHHSSIALG*VASQTRVRCPHAQP
Trigger: TGGTTGTGCATGGGGACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR CCA 90 bp ACATGGAAGGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGACCAGAGTTAGATGTCCCCATGCAC +
Preference number: 1 (lower is better)
Translates to: TWKDCRERHITAALP*GGWLPRPELDVPMH
Trigger: GTGCATGGGGACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCCTTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR CCA 90 bp TCCAGGCTGCATGCTCAGGCCAGTGCCTGCTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTGGTGGCAGCAGGAGGGCTCAGTAGA +
Preference number: 1 (lower is better)
Translates to: SRLHAQASACSFHTS*VTVTKVVAAGGLSR
Trigger: TCTACTGAGCCCTCCTGCTGCCACCACTTTTGTGACTGTCACCCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR GCA 90 bp AGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTCCTTCCATACCTCATGGGTGACAGT +
Preference number: 1 (lower is better)
Translates to: SPQPAARDKNTLQAA*SGQCLLLPYLMGDS
Trigger: ACTGTCACCCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR GCA 90 bp AACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTaGAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGG +
Preference number: 1 (lower is better)
Translates to: NHVNSLHTSAPTWKD*RERHITAALPWGGW
Trigger: CCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR GCA 90 bp CAGGTGTGTTCTGCAGCCCCAGGCCCCAACAGAGAGGCATCCAAATaGCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGA +
Preference number: 1 (lower is better)
Translates to: QVCSAAPGPNREASK*LSQLRLHTERTMNG
Trigger: TCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGATGCCTCTCTGTTGGGGCCTGGGGCTGCAGAACACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR GCA 90 bp CTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGGGTGACAGTCACAAAAGTGGTGGCA +
Preference number: 1 (lower is better)
Translates to: LETRTLSRLHAQASA*SFHTSWVTVTKVVA
Trigger: TGCCACCACTTTTGTGACTGTCACCCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR GCA 90 bp GCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTCATGGGTGACAGTCACAAAAGTGGT +
Preference number: 1 (lower is better)
Translates to: AARDKNTLQAACSGQ*LLLPYLMGDSHKSG
Trigger: ACCACTTTTGTGACTGTCACCCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR GCA 90 bp CGGGGCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATaGTTGCCATCAATATCCATCATTATCGTCAAATGCCTCTTGACG +
Preference number: 1 (lower is better)
Translates to: RGRRTPGTSMQSLHS*LPSISIIIVKCLLT
Trigger: CGTCAAGAGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR CCA 90 bp TGGCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: WHHNHVNSLHTSAPT*KDCRERHITAALPW
Trigger: CCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR GCA 90 bp TCCAAACACAGGCCCTGGCTGCATCCGATCCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGAT +
Preference number: 1 (lower is better)
Translates to: SKHRPWLHPILCVPD*QAIPMQILLSLSMD
Trigger: ATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR GCA 90 bp TCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTCACACCTCTaGTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACAGCAGC +
Preference number: 1 (lower is better)
Translates to: SVILASQPRKFSSHL*SHMEGLQGKAHHSS
Trigger: GCTGCTGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGCCAAAATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR GCA 90 bp GGCTGCATCCGATCCTTTGTGTACCAGATTGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGTCCATGGATTTTGAAGTGCACCTGC +
Preference number: 1 (lower is better)
Translates to: GCIRSFVYQIAKPSP*RFFFPCPWILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR TCA 90 bp CCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATGGACTTG +
Preference number: 1 (lower is better)
Translates to: PSHPHADSSFLVHGF*SAPATPSLSGNMDL
Trigger: CAAGTCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CCA 90 bp TCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTCAGTTCAAAC +
Preference number: 1 (lower is better)
Translates to: SGSFILSTEGKNTSR*SFSSSGVLSTVSSN
Trigger: GTTTGAACTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR GCA 90 bp CTCAATGACAGTGAACTCTTCCAGGCACAGATGATGAGGGTCTGTTaGTCTCAGACTTGGAACATGAGAACAGCAACTGTCTCTTGTCCA +
Preference number: 1 (lower is better)
Translates to: LNDSELFQAQMMRVC*SQTWNMRTATVSCP
Trigger: TGGACAAGAGACAGTTGCTGTTCTCATGTTCCAAGTCTGAGAGCAACAGACCCTCATCATCTGTGCCTGGAAGAGTTCACTGTCATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR GCA 90 bp CAACTCCCAGTCTCTCAGGAAACATGGACTTGTACAAAATCACAGTaGAGCCACACCAGGAATACTGCATTCACTTCTTGTCGCCATACC +
Preference number: 1 (lower is better)
Translates to: QLPVSQETWTCTKSQ*SHTRNTAFTSCRHT
Trigger: GGTATGGCGACAAGAAGTGAATGCAGTATTCCTGGTGTGGCTGCACTGTGATTTTGTACAAGTCCATGTTTCCTGAGAGACTGGGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CCA 90 bp CAGATTGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACAT +
Preference number: 1 (lower is better)
Translates to: QIAKPSPCRFFFPCP*ILKCTCNSQSLRKH
Trigger: ATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CCA 90 bp ATGGATTTTGAAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATaGACTTGTACAAAATCACAGTGCAGCCACACCAGGAATACTGCA +
Preference number: 1 (lower is better)
Translates to: MDFEVHLQLPVSQET*TCTKSQCSHTRNTA
Trigger: TGCAGTATTCCTGGTGTGGCTGCACTGTGATTTTGTACAAGTCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CCA 90 bp AAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGT +
Preference number: 1 (lower is better)
Translates to: KTEVEGPSESNNTAA*AMKFCSVILASQPR
Trigger: ACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR CCA 90 bp CAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATaGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGA +
Preference number: 1 (lower is better)
Translates to: QVGRGLGQMQNPTNG*SESLWCYQFLILCG
Trigger: TCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CCA 90 bp TCCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATaGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTG +
Preference number: 1 (lower is better)
Translates to: SSGRQRVGSNAKPNE*MVRKPVVLPVFNSL
Trigger: CAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CCA 90 bp AGACCACATGACAAATGTTGCTTTTGGTTTGATCAAACCTGGAGCTaGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: RPHDKCCFWFDQTWS*SVAQLIHGIHDVFQ
Trigger: CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAACCAAAAGCAACATTTGTCATGTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CCA 90 bp ATGGTCAGACCACATGACAAATGTTGCTTTTGGTTTGATCAAACCTaGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTC +
Preference number: 1 (lower is better)
Translates to: MVRPHDKCCFWFDQT*SWSVAQLIHGIHDV
Trigger: GACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAACCAAAAGCAACATTTGTCATGTGGTCTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR GCA 90 bp CCATGCAGATTCTTCTTTCCTTGTCCATGGATTTTGAAGTGCACCTaGAACTCCCAGTCTCTCAGGAAACATGGACTTGTACAAAATCAC +
Preference number: 1 (lower is better)
Translates to: PCRFFFPCPWILKCT*NSQSLRKHGLVQNH
Trigger: GTGATTTTGTACAAGTCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CCA 90 bp GGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGA +
Preference number: 2 (lower is better)
Translates to: GLQGKAHHSSIALGWVASSIALG*VASQTR
Trigger: TCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCT...GGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 2 (lower is better)
Translates to: LQGKAHHSSIALGWVASQACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCAACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: GHSGAAVELSSQAASYCPTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GGCCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: GQATQGRQWSCHLRQLHIEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...AATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp GTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTCCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: VVAAGGLSRSAFGSVPAIPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...AATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp AAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCACCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: KWWQQEGSVEALSALFLPPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...TGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp CCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PQPAARDKNTLQAACSGQTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...CTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp GTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 2 (lower is better)
Translates to: VVAAGGLSRSAFGSVPAILRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...AATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp CCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 2 (lower is better)
Translates to: PGHSGAAVELSSQAASYCACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...ACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: LQGKAHHSSIALGWVASQGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: GLQGKAHHSSIALGWVASAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...GGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GCCGCGGGGCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTTGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: AAGQADSGHFNAVPPLMLCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...AAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGCCCCGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp CATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAGAGTTAGATGTCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 2 (lower is better)
Translates to: HHSSIALGWVASQTRVRCLRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...ACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 2 (lower is better)
Translates to: QPAARDKNTLQAACSGQCAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: AGKGTSQQHCPGVGGFPDLCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...GTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CCA 90 bp AGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: RPLRGGSGAVISGSFILSTSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...GGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp AGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: RPLRGGSGAVISGSFILSEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...GGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp AGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCATCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 2 (lower is better)
Translates to: RERHITAALPWGGWLPRPSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...TGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp GTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 2 (lower is better)
Translates to: VMKIADNGCAASQLCRPPVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...GGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp ACAAAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 2 (lower is better)
Translates to: TKVVAAGGLSRSAFGSVPAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...AGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp CCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: PGHSGAAVELSSQAASYCGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...ACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 2 (lower is better)
Translates to: GLQGKAHHSSIALGWVASQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...GGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCATCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 2 (lower is better)
Translates to: GHSGAAVELSSQAASYCPSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 2 (lower is better)
Translates to: LQGKAHHSSIALGWVASQSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp CACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: HQEGVVMKIADNGCAASQEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...CTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp GTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: VAAGGLSRSAFGSVPAICSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...ACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp AAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 2 (lower is better)
Translates to: KVVAAGGLSRSAFGSVPALHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...GGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 2 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp TTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: LSTEGKNTSRWSFSSSGVTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...AACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: ADSGHFNAVPPLMLAINIAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...GATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp CTCAGAGTTCCAGGCCCTCCAAGGAGACTCTGGCCTGTAACTGATTTAATCCCAACATCACAGCAGCATTaGCCTGGGGTGGGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LRVPGPPRRLWPVTDLIPTSQQH*PGVGGF
Trigger: GAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGT...TGGGATTAAATCAGTTACAGGCCAGAGTCTCCTTGGAGGGCCTGGAACTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR GCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCTTCTCTTCACACCTCTaGTCCCACATGGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: QPAARDKNTLQAACSGQCFSSHL*SHMEGL
Trigger: CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAACGCAGGTGTGTTCTaGAGCCCCAGGCCCCAACAG +
Preference number: 2 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRNAGVF*SPRPQQ
Trigger: CTGTTGGGGCCTGGGGCTGCAGAACACACCTGCGTT...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp AAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCAGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 2 (lower is better)
Translates to: KWWQQEGSVEALSALFLPAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...TGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CCA 90 bp GTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGA +
Preference number: 2 (lower is better)
Translates to: VEGPSESNNTAAWAMKFCSIALG*VASQTR
Trigger: TCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCT...ACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp GGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: GSFILSTEGKNTSRWSFSTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...GGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGACTCAGGGGCGGCAGTaGAGCTGTCATCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLTQGRQ*SCHLRQ
Trigger: CTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGT...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp AGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATACCCGCTGGACTCCTaGAGAATATCGCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: RRTPGTSMQSLHSCLPSIYPLDS*RISPLL
Trigger: CAGAAGAGGCGATATTCTCCAGGAGTCCAGCGGGTA...TATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449221.5
3UTR-3UTR GCA 90 bp CACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 2 (lower is better)
Translates to: HGSLGYEILFCDFGITTTAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...CGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 2 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp GCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGAGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 2 (lower is better)
Translates to: AVISGSFILSTEGKNTSRACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...TCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp AGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACAGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 2 (lower is better)
Translates to: SGAVISGSFILSTEGKNTACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...TGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp GTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 2 (lower is better)
Translates to: VMKIADNGCAASQLCRPPSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...GGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp CCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: PQPAARDKNTLQAACSGQNNTAA*AMKFCS
Trigger: AGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTT...CTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCAAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GHSGAAVELSSQAASYCPKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 2 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR GCA 90 bp CAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 2 (lower is better)
Translates to: QAASYCPLRARTHLDGAFAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...AAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACAACGCAGGTGTGTTCTaGAGCCCCAGGCCCCAACAG +
Preference number: 2 (lower is better)
Translates to: GQYPSPRCKKKASLHFQHNAGVF*SPRPQQ
Trigger: CTGTTGGGGCCTGGGGCTGCAGAACACACCTGCGTT...GTGCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR GCA 90 bp GCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCTGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: ADSGHFNAVPPLMLAINICRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...GATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp GGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACCCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: GQYPSPRCKKKASLHFQHPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...GTGCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR CCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: NTAAWAMKFCSVILASQPPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp TTTGATCAAACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: FDQTWSWSVAQLIHGIHDTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...ATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASTSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CAA 90 bp TTCCAAACACAGGCCCTGGCTGCATCCGATCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGA +
Preference number: 2 (lower is better)
Translates to: FQTQALAASDPLCTR*PSHPHADSSFLVHG
Trigger: TCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR TCA 90 bp GGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTCTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: GKNTSRWSFSSSGVLSTVSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...GACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAGTAGAAGGGCCTTCTaGGTCAAACAACACGGCAGC +
Preference number: 2 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRSRRAF*VKQHGS
Trigger: GCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACT...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR TCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGAGTAGAAGGGCCTTCTaGGTCAAACAACACGGCAGC +
Preference number: 2 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLSRRAF*VKQHGS
Trigger: GCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACT...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGCCTAATGAAGGCCAGTaGAACGCAGGTGTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQPNEGQ*NAGVFC
Trigger: GCAGAACACACCTGCGTTTCACTGGCCTTCATTAGG...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR TCA 90 bp AGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: RPLRGGSGAVISGSFILSKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...GGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp CAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QMQNPTNGWSESLWCYQFTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...AAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp TTTGATCAAACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: FDQTWSWSVAQLIHGIHDEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...ATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: VKQHGSLGYEILFCDFGIEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACATCACAGCAGCATTaGCCTGGGGTGGGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: VKQHGSLGYEILFCDFGITSQQH*PGVGGF
Trigger: GAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGT...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp GGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCCCCACATGGAAGGACTaGAGGGAAAGGCACATCACA +
Preference number: 2 (lower is better)
Translates to: GSFILSTEGKNTSRWSFSPTWKD*RERHIT
Trigger: TGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGG...GGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp TTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCCCACATGGAAGGACTaGAGGGAAAGGCACATCACA +
Preference number: 2 (lower is better)
Translates to: LSTEGKNTSRWSFSSSGVPTWKD*RERHIT
Trigger: TGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGG...AACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp ACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGTTCTCTTCACACCTCTaGTCCCACATGGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: TWSWSVAQLIHGIHDVFQFSSHL*SHMEGL
Trigger: CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA...CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp CTCAGAGTTCCAGGCCCTCCAAGGAGACTCTGGCCTGTAACTGATTTAATCCCACTGGAGCTGGTCAGTTaGACAGCTAATCCATGGCAT +
Preference number: 2 (lower is better)
Translates to: LRVPGPPRRLWPVTDLIPLELVS*TANPWH
Trigger: ATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAG...TGGGATTAAATCAGTTACAGGCCAGAGTCTCCTTGGAGGGCCTGGAACTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR GCA 90 bp CTTCTCCTCATTGGGGTAGGTGTCTACAAATACTCCCAGCCCCACAAATTTGTCCTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 2 (lower is better)
Translates to: LLLIGVGVYKYSQPHKFVLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...GACAAATTTGTGGGGCTGGGAGTATTTGTAGACACCTACCCCAATGAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR GCA 90 bp CAACCATGGGAATGCGGGGTCCCTGCATTCAAAACTCCAGTGACAGAATATAGTCTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 2 (lower is better)
Translates to: QPWECGVPAFKTPVTEYSLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...ACTATATTCTGTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCCCATGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp ATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: ILSTEGKNTSRWSFSSSGTSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp CAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QAASYCPLRARTHLDGAFEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...AAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCGAGCTTTTCCTCTTCTaGGGTTCTCTCCACTGTCAG +
Preference number: 2 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLELFLF*GSLHCQ
Trigger: CTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTC...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp GTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: VEGPSESNNTAAWAMKFCSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...ACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp AGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATACATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: RRTPGTSMQSLHSCLPSIHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...TATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp TCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 2 (lower is better)
Translates to: SGHFNAVPPLMLAINIHHSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...ATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp GCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGACTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 2 (lower is better)
Translates to: AVISGSFILSTEGKNTSRLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...TCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR GCA 90 bp CAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 2 (lower is better)
Translates to: QMQNPTNGWSESLWCYQFACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...AAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp CACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 2 (lower is better)
Translates to: HFNAVPPLMLAINIHHYRACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...ACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp AGTGGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCAACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: SGIPKIVTTKHAAKQALATLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...TGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR GCA 90 bp TTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: FNAVPPLMLAINIHHYRQTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...TTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp CAACCATGGGAATGCGGGGTCCCTGCATTCAAAACTCCAGTGACAGAATATAGTGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: QPWECGVPAFKTPVTEYSAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...ACTATATTCTGTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCCCATGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCCCCACATGGAAGGACTaGAGGGAAAGGCACATCACA +
Preference number: 2 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAPTWKD*RERHIT
Trigger: TGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGG...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGAGAGAGGCATCCAAATaGCTTTCCCAGCTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLREASK*LSQLRL
Trigger: CAACCTGAGCTGGGAAAGGCATTTGGATGCCTCTCT...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp CTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCATGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: LRARTHLDGAFPLLGFSPCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...TGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCACAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 2 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR GCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCCAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 2 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSTSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR CCA 90 bp GAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCAACCCAACGAATGGATaGTCAGAAAGCCTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: EYSPQPAARDKNTLQAACNPTNG*SESLWC
Trigger: ACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT...GCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CAA 90 bp TTTCCATCCTGGTTTCCAAAGAAAGCTCCTCAGGTAGGCAGAGGGTaGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: FPSWFPKKAPQVGRG*GQMQNPTNGWSESL
Trigger: CAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGGAGCTTTCTTTGGAAACCAGGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CAA 90 bp GCCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATGGACTT +
Preference number: 2 (lower is better)
Translates to: AKPSPCRFFFPCPWI*KCTCNSQSLRKHGL
Trigger: AAGTCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CAA 90 bp TGTGTACCAGATTGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTGCACCTGCAACTCCCAGTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: CVPDCQAIPMQILLS*SMDFEVHLQLPVSQ
Trigger: CTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR TCA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACCATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGACATGCTAGGGAACAGTaGTCCAAAGCAGAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRHAREQ*SKAESH
Trigger: ATGGCTTTCTGCTTTGGATCACTGTTCCCTAGCATG...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR TCA 90 bp GAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 2 (lower is better)
Translates to: ELSSQAASYCPLRARTHLLHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...GAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp GAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCCAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 2 (lower is better)
Translates to: ELSSQAASYCPLRARTHLQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...GAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp AACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: NPTNGWSESLWCYQFLILTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...AAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CCA 90 bp CCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTCTTGACGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: PPLMLAINIHHYRQMPLDEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...GTCAAGAGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp GCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTGAATATCGCCTCTTCTaGGCCTCTTGCTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: AVPPLMLAINIHHYRQMPEYRLF*ASCCFS
Trigger: GGAGAAGCAGCAAGAGGCCCAGAAGAGGCGATATTC...AGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449221.5
3UTR-3UTR TCA 90 bp GGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCAAGTGGGCCTGAAGAGACTTaGTTGGGAAGGCCATGGACA +
Preference number: 2 (lower is better)
Translates to: GIPKIVTTKHAAKQALASGPEET*LGRPWT
Trigger: TGTCCATGGCCTTCCCAATCAAGTCTCTTCAGGCCC...ACTTGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR TCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACTTCACTGAGGGCCTaGAGAGACTTGATTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSTSLRA*RDLIGK
Trigger: CTTCCCAATCAAGTCTCTTCAGGCCCTCAGTGAAGT...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR GCA 90 bp CAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: QMQNPTNGWSESLWCYQFGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...AAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp ATCCAAATGCCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGAGTTGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: IQMPFPAQVAHREDNEWSCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...ACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CCA 90 bp TCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAAGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: SMQSLHSCLPSISIIIVKEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...TTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTCATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR TCA 90 bp AGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCCTCATGTTGCTTTTGGTTTaGTCAAACCTGGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: RKVRQGRSFHPGFQRKLLMLLLV*SNLELV
Trigger: GACCAGCTCCAGGTTTGATCAAACCAAAAGCAACAT...GAGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCGAGGGTTGGGTCAAATaGAAAACCCAACGAATGGAT +
Preference number: 2 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAEGWVK*KTQRMD
Trigger: ATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTC...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp CACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 2 (lower is better)
Translates to: HGSLGYEILFCDFGITTTPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...CGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR GCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACCACACCAGGAATACTaGATTCACTTCTTGTCGCCA +
Preference number: 2 (lower is better)
Translates to: NTAAWAMKFCSVILASQPPHQEY*IHFLSP
Trigger: TGGCGACAAGAAGTGAATGCAGTATTCCTGGTGTGG...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR GCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGTGTACAAAATCACAGTaGAGCCACACCAGGAATACT +
Preference number: 2 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQCTKSQ*SHTRNT
Trigger: AGTATTCCTGGTGTGGCTGCACTGTGATTTTGTACA...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CCA 90 bp GGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACAACCCAACGAATGGATaGTCAGAAAGCCTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: GQYPSPRCKKKASLHFQHNPTNG*SESLWC
Trigger: ACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT...GTGCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR CCA 90 bp ATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: ISGSFILSTEGKNTSRWSFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...GCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR TCA 90 bp TCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: SMQSLHSCLPSISIIIVKSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...TTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR TCA 90 bp AAAAGCCAAATTTCTTCTCTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGAGTAGAAGGGCCTTCTaGGTCAAACAACACGGCAGC +
Preference number: 2 (lower is better)
Translates to: KSQISSLGNIQAQGVRRKSRRAF*VKQHGS
Trigger: GCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACT...CTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAGAGAAGAAATTTGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR TCA 90 bp ATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: ISGSFILSTEGKNTSRWSKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...GCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp TCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGACCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 2 (lower is better)
Translates to: SSQAASYCPLRARTHLDGPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...TCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR GCA 90 bp CAACCATGGGAATGCGGGGTCCCTGCATTCAAAACTCCAGTGACAGAATATAGTCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 2 (lower is better)
Translates to: QPWECGVPAFKTPVTEYSPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...ACTATATTCTGTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCCCATGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp GAAAGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 2 (lower is better)
Translates to: ERKVRQGRSFHPGFQRKLSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...GAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 2 (lower is better)
Translates to: VKQHGSLGYEILFCDFGISFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp TATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 2 (lower is better)
Translates to: YRQMPLDVANHQEGVVMKSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...CTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: VKQHGSLGYEILFCDFGINNTAA*AMKFCS
Trigger: AGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTT...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CCA 90 bp CACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGAAGAAGTTTCCATCCTaGTTTCCAAAGAAAGCTCCT +
Preference number: 2 (lower is better)
Translates to: HGSLGYEILFCDFGITTTKKFPS*FPKKAP
Trigger: AGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTT...CGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CCA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGACAAATGTTGCTTTTaGTTTGATCAAACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: VTEYSPQPAARDKNTLQADKCCF*FDQTWS
Trigger: GCTCCAGGTTTGATCAAACCAAAAGCAACATTTGTC...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp GAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: EWMVRKPVVLPVFNSLWIGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...AATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp AAAACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTGAGGGTTGGGTCAAATaGAAAACCCAACGAATGGAT +
Preference number: 2 (lower is better)
Translates to: KTPVTEYSPQPAARDKNTEGWVK*KTQRMD
Trigger: ATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTC...AGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTTGGTCAGAAAGCCTGTaGTGTTACCAGTTTTTAATT +
Preference number: 2 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASWSESL*CYQFLI
Trigger: AATTAAAAACTGGTAACACCACAGGCTTTCTGACCA...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR TCA 90 bp GAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: EWMVRKPVVLPVFNSLWISIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...AATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR GCA 90 bp ATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAAACGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: MVRKPVVLPVFNSLWIQNAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...GTTTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CCA 90 bp AAAAGCCAAATTTCTTCTCTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGGATCAAACCTGGAGCTaGTCAGTTGCACAGCTAATC +
Preference number: 2 (lower is better)
Translates to: KSQISSLGNIQAQGVRRKDQTWS*SVAQLI
Trigger: GATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATC...CTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAGAGAAGAAATTTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR CCA 90 bp GGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCAAGTAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GIPKIVTTKHAAKQALASKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...ACTTGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR TCA 90 bp AATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTCATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: NAKPNEWMVRKPVVLPVFHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...AAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR TCA 90 bp CAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATCATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: QCSPSTHACHQYPSLSSNHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...ATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
3UTR-3UTR TCA 90 bp AACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTCTCAGACTTGGAACATaGGAACAGCAACTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: NPTNGWSESLWCYQFLILLRLGT*EQQLSL
Trigger: AAGAGACAGTTGCTGTTCTCATGTTCCAAGTCTGAG...AAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR-3UTR GCA 90 bp ATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAAACTTCTCTTCACACCTCTaGTCCCACATGGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: MVRKPVVLPVFNSLWIQNFSSHL*SHMEGL
Trigger: CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA...GTTTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CCA 90 bp AACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGGTCAGAAAGCCTGTaGTGTTACCAGTTTTTAATT +
Preference number: 2 (lower is better)
Translates to: NPTNGWSESLWCYQFLILWSESL*CYQFLI
Trigger: AATTAAAAACTGGTAACACCACAGGCTTTCTGACCA...AAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CAA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: GHSGAAVELSSQAASYCPHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
3UTR TCA 72 bp AAAGCCATCTCCCTAGGGCCACCTAATGAAGGCCAGTaGAACGCAGGTGTGTTCTGCAGCCCCAGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: KAISLGPPNEGQ*NAGVFCSPRPQ
Trigger: TTGGGGCCTGGGGCTGCAGAACACACCTGCGTTTCACTGGCCTTCATTAGGTGGCCCTAGGGAGATGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CCA 72 bp CAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGAGTTAGATGTCCCCAT +
Preference number: 3 (lower is better)
Translates to: QGKAHHSSIALG*VASQTRVRCPH
Trigger: ATGGGGACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR CCA 72 bp GACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGACCAGAGTTAGATGTC +
Preference number: 3 (lower is better)
Translates to: DCRERHITAALP*GGWLPRPELDV
Trigger: GACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR GCA 72 bp GACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTCATGGGTGACAGTCAC +
Preference number: 3 (lower is better)
Translates to: DKNTLQAACSGQ*LLLPYLMGDSH
Trigger: GTGACTGTCACCCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR GCA 72 bp CCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTCCTTCCATACCTCATG +
Preference number: 3 (lower is better)
Translates to: PAARDKNTLQAA*SGQCLLLPYLM
Trigger: CATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR-3UTR CAA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCCAGGTAGGCAGAGGGTaGGGTCAAATGCAAAACCCA +
Preference number: 3 (lower is better)
Translates to: NQLLETRTLSRLHAQASAQVGRG*GQMQNP
Trigger: TGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTG...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CAA 90 bp GCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAACCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCC +
Preference number: 3 (lower is better)
Translates to: AGGLRALQCSPSTHACHQPCPWI*KCTCNS
Trigger: GGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGG...TTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CAA 90 bp AGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGCACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: RGLGQMQNPTNGWSESLWHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...CCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CAA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTCACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: VTEYSPQPAARDKNTLQAHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR GCA 72 bp AGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGGGTGACAGTCACAAAA +
Preference number: 3 (lower is better)
Translates to: RTLSRLHAQASA*SFHTSWVTVTK
Trigger: TTTTGTGACTGTCACCCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
3UTR GCA 72 bp AATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTaGAGGGAAAGGCACATCACAGCAGCATTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: NSLHTSAPTWKD*RERHITAALPW
Trigger: CCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR-3UTR CAA 90 bp CAACCATGGGAATGCGGGGTCCCTGCATTCAAAACTCCAGTGACAGAATATAGTCACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: QPWECGVPAFKTPVTEYSHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...ACTATATTCTGTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCCCATGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR GCA 72 bp AGGCCCTGGCTGCATCCGATCCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAGATTCTTCTTTCCTTG +
Preference number: 3 (lower is better)
Translates to: RPWLHPILCVPD*QAIPMQILLSL
Trigger: CAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CAA 90 bp ACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGCAGGTAGGCAGAGGGTaGGGTCAAATGCAAAACCCA +
Preference number: 3 (lower is better)
Translates to: TWSWSVAQLIHGIHDVFQQVGRG*GQMQNP
Trigger: TGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTG...CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CAA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCATCAGGAAACATGGACTaGTACAAAATCACAGTGCAG +
Preference number: 3 (lower is better)
Translates to: GHSGAAVELSSQAASYCPSGNMD*YKITVQ
Trigger: CTGCACTGTGATTTTGTACAAGTCCATGTTTCCTGA...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CCA 72 bp GAAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATaGACTTGTACAAAATCACAGTGCAGCCACACCAGG +
Preference number: 3 (lower is better)
Translates to: EVHLQLPVSQET*TCTKSQCSHTR
Trigger: CCTGGTGTGGCTGCACTGTGATTTTGTACAAGTCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CAA 90 bp GGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: GSFILSTEGKNTSRWSFSSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...GGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CAA 90 bp AGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: SGAVISGSFILSTEGKNTSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...TGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR GCA 72 bp TTGGCATCACAACCACGTAAATTCTCTTCACACCTCTaGTCCCACATGGAAGGACTGCAGGGAAAGGCACAT +
Preference number: 3 (lower is better)
Translates to: LASQPRKFSSHL*SHMEGLQGKAH
Trigger: ATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR GCA 72 bp CGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATaGTTGCCATCAATATCCATCATTATCGTCAAATGC +
Preference number: 3 (lower is better)
Translates to: RTPGTSMQSLHS*LPSISIIIVKC
Trigger: GCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CAA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACTTTCCCAGCTCAGGTaGCACACAGAGAGGACAATG +
Preference number: 3 (lower is better)
Translates to: NTAAWAMKFCSVILASQPLSQLR*HTERTM
Trigger: CATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAG...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CAA 90 bp CATTATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 3 (lower is better)
Translates to: HYRQMPLDVANHQEGVVMAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...CATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR TCA 72 bp CCCCATGCAGATTCTTCTTTCCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCCAGTCTCTCAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PHADSSFLVHGF*SAPATPSLSGN
Trigger: GTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR GCA 72 bp AGTGAACTCTTCCAGGCACAGATGATGAGGGTCTGTTaGTCTCAGACTTGGAACATGAGAACAGCAACTGTC +
Preference number: 3 (lower is better)
Translates to: SELFQAQMMRVC*SQTWNMRTATV
Trigger: GACAGTTGCTGTTCTCATGTTCCAAGTCTGAGAGCAACAGACCCTCATCATCTGTGCCTGGAAGAGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
3UTR GCA 72 bp CTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTaGCATCAATATCCATCATTATCGTCAAATGCCTCT +
Preference number: 3 (lower is better)
Translates to: LRALQCSPSTHA*HQYPSLSSNAS
Trigger: AGAGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR CCA 72 bp TTCATATTGTCCACTGAGGGCAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTC +
Preference number: 3 (lower is better)
Translates to: FILSTEGKNTSR*SFSSSGVLSTV
Trigger: GACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR CCA 72 bp AAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGCAACTCCCAGTCTCTC +
Preference number: 3 (lower is better)
Translates to: KPSPCRFFFPCP*ILKCTCNSQSL
Trigger: GAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR-3UTR CAA 90 bp GAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCTCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 3 (lower is better)
Translates to: ELSSQAASYCPLRARTHLSLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...GAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CAA 90 bp AAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACACCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 3 (lower is better)
Translates to: KQHGSLGYEILFCDFGITPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...TGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CCA 72 bp GTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCTGTGATTTTGGCATCA +
Preference number: 3 (lower is better)
Translates to: VEGPSESNNTAA*AMKFCSVILAS
Trigger: TGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
3UTR CCA 72 bp AGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATaGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTT +
Preference number: 3 (lower is better)
Translates to: RQRVGSNAKPNE*MVRKPVVLPVF
Trigger: AAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CAA 90 bp CATTATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGTCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 3 (lower is better)
Translates to: HYRQMPLDVANHQEGVVMSLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...CATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CAA 90 bp AAAAGCCAAATTTCTTCTCTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: KSQISSLGNIQAQGVRRKSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...CTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAGAGAAGAAATTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR GCA 72 bp GTCTCTCAGGAAACATGGACTTGTACAAAATCACAGTaGAGCCACACCAGGAATACTGCATTCACTTCTTGT +
Preference number: 3 (lower is better)
Translates to: VSQETWTCTKSQ*SHTRNTAFTSC
Trigger: ACAAGAAGTGAATGCAGTATTCCTGGTGTGGCTGCACTGTGATTTTGTACAAGTCCATGTTTCCTGAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CCA 72 bp GACAAATGTTGCTTTTGGTTTGATCAAACCTGGAGCTaGTCAGTTGCACAGCTAATCCATGGCATCCATGAT +
Preference number: 3 (lower is better)
Translates to: DKCCFWFDQTWS*SVAQLIHGIHD
Trigger: ATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAACCAAAAGCAACATTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR TCA 72 bp TGCCATCAATATCCATCATTATCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGAAGGTGTCGTAATGAA +
Preference number: 3 (lower is better)
Translates to: CHQYPSLSSNAS*RSESPGRCRNE
Trigger: TTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATGATGGATATTGATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR-3UTR CAA 90 bp AACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTCTTCCAGGCTTCTCTaGATTTTTACACCAACCTTT +
Preference number: 3 (lower is better)
Translates to: NPTNGWSESLWCYQFLILSSRLL*IFTPTF
Trigger: AAAGGTTGGTGTAAAAATCAAGAGAAGCCTGGAAGA...AAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CCA 72 bp ATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTaGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAA +
Preference number: 3 (lower is better)
Translates to: MQNPTNGWSESL*CYQFLILCGFK
Trigger: TTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR-3UTR CAA 90 bp ATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAAACTTCTGTTCTGTGATTTaGGCATCACAACCACGTAAA +
Preference number: 3 (lower is better)
Translates to: MVRKPVVLPVFNSLWIQNFCSVI*ASQPRK
Trigger: TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA...GTTTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp TTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCAAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LRTMAVQPPSSVGRPSRSKHRRH*CHDPRG
Trigger: ACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTT...TGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp TTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCAACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRTMAVQPPSSVGRPSRSTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...TGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCATGATCATAGCTGAGGGAGCCGGGAGAAAAAGACGATaGGGAAGAGGGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ASQLCRPPIPLMIIAEGAGRKRR*GRGPGH
Trigger: GTGGCCTGGCCCTCTTCCTCATCGTCTTTTTCTCCC...GGCTCCCTCAGCTATGATCATGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCATCGCCGCCACTGCTaGCACGACCCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QPAARDKNTLQAACSGQCHRRHC*HDPRGP
Trigger: GGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATG...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATCATCGCCGCCACTGCTaGCACGACCCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINHRRHC*HDPRGP
Trigger: GGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATG...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GCCGCGGGGCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGGCTTCGACAGCGAGTaGTCCCGTTTCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: AAGQADSGHFNAVPPLMLGFDSE*SRFKYS
Trigger: CGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCC...AAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGCCCCGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGGTGAGGAACTGCCTGTaGCCACACCCTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LQGKAHHSSIALGWVASQVRNCL*PHPGRA
Trigger: AGCCCTACCAGGGTGTGGGCACAGGCAGTTCCTCAC...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGKGTSQQHCPGVGGFPDTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...GTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAGTGAGGAACTGCCTGTaGCCACACCCTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: RERHITAALPWGGWLPRPVRNCL*PHPGRA
Trigger: AGCCCTACCAGGGTGTGGGCACAGGCAGTTCCTCAC...TGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCACTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: LRTMAVQPPSSVGRPSRSLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...TGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp AGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAAACGCAGGTGTGTTCTaGAGCCCCAGGCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: RERHITAALPWGGWLPRPNAGVF*SPRPQQ
Trigger: CTGTTGGGGCCTGGGGCTGCAGAACACACCTGCGTT...TGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GGCCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTCCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GQATQGRQWSCHLRQLHIPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...AATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCATGCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: ADNGCAASQLCRPPIPLMLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...CATGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCCGCGGGGCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: AAGQADSGHFNAVPPLMLLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...AAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGCCCCGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCATGTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ADNGCAASQLCRPPIPLMSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...CATGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCAGTGAGGAACTGCCTGTaGCCACACCCTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GHSGAAVELSSQAASYCPVRNCL*PHPGRA
Trigger: AGCCCTACCAGGGTGTGGGCACAGGCAGTTCCTCAC...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VMKIADNGCAASQLCRPPTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...GGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAAACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGGLRALQCSPSTHACHQTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...TTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGCCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PQPAARDKNTLQAACSGQPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...CTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCACATCGCCGCCACTGCTaGCACGACCCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSHRRHC*HDPRGP
Trigger: GGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATG...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTCCATCGCCGCCACTGCTaGCACGACCCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GKNTSRWSFSSSGVLSTVHRRHC*HDPRGP
Trigger: GGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATG...GACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp AAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 4 (lower is better)
Translates to: KVVAAGGLSRSAFGSVPAAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...GGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp AGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAGAAGGAGTAACATCCTaGACCCATCCCGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: RERHITAALPWGGWLPRPEGVTS*THPEPT
Trigger: TGTCGGCTCGGGATGGGTCCAGGATGTTACTCCTTC...TGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RERHITAALPWGGWLPRPTSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...TGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: LQGKAHHSSIALGWVASQLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGTCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LQGKAHHSSIALGWVASQSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: NQLLETRTLSRLHAQASALRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGKGTSQQHCPGVGGFPDSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...GTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCCCCAGGGCAGTAAGGTaGGCAGCATGTAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: NQLLETRTLSRLHAQASAPRAVR*AACNPL
Trigger: CAAGGGGTTACATGCTGCTCACCTTACTGCCCTGGG...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCATCGCCGCCACTGCTaGCACGACCCAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLHRRHC*HDPRGP
Trigger: GGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATG...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGGCACCCTGTTTACTTTaGATATCTGGGGTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: LQGKAHHSSIALGWVASQAPCLL*ISGVRR
Trigger: CCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGC...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GLQGKAHHSSIALGWVASLCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...GGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 4 (lower is better)
Translates to: VAAGGLSRSAFGSVPAICACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...ACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATACATCACAGCAGCATTaGCCTGGGGTGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINTSQQH*PGVGGF
Trigger: GAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGT...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACAGAGAGGCATCCAAATaGCTTTCCCAGCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGKGTSQQHCPGVGGFPDREASK*LSQLRL
Trigger: CAACCTGAGCTGGGAAAGGCATTTGGATGCCTCTCT...GTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GGCCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGGAATACCCGCTGGCTaGATCCGATCCTTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: GQATQGRQWSCHLRQLHIGIPAG*IRSFVY
Trigger: GTACACAAAGGATCGGATGCAGCCAGCGGGTATTCC...AATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440610.5
CDS-3UTR CCA 90 bp GTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VVAAGGLSRSAFGSVPAIEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...AATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp ACAAAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTACTCAGGGGCGGCAGTaGAGCTGTCATCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TKVVAAGGLSRSAFGSVPTQGRQ*SCHLRQ
Trigger: CTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGT...AGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp AGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATAACTCAGGGGCGGCAGTaGAGCTGTCATCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRTPGTSMQSLHSCLPSITQGRQ*SCHLRQ
Trigger: CTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGT...TATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATCATCAGATTCCACAGTaGGGAACTGCCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINHQIPQ*GTACAH
Trigger: GTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATG...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAAGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 4 (lower is better)
Translates to: AGGLRALQCSPSTHACHQVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...TTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: GVVMKIADNGCAASQLCRLRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...CCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCATGCATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ADNGCAASQLCRPPIPLMHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...CATGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GCCGCGGGGCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTCATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AAGQADSGHFNAVPPLMLHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...AAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGCCCCGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GCCGCGGGGCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 4 (lower is better)
Translates to: AAGQADSGHFNAVPPLMLPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...AAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGCCCCGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAGAGTTAGATGTCTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: HHSSIALGWVASQTRVRCLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...ACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTCTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: VAAGGLSRSAFGSVPAICLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...ACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 4 (lower is better)
Translates to: HQEGVVMKIADNGCAASQACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...CTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp ATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IVPNQLLETRTLSRLHAQTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...CTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAACTGGGTCATCACCATaGCATTGCCCATCAGATTCC +
Preference number: 4 (lower is better)
Translates to: RERHITAALPWGGWLPRPTGSSP*HCPSDS
Trigger: GGAATCTGATGGGCAATGCCATGGTGATGACCCAGT...TGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCGATCAAACCTGGAGCTaGTCAGTTGCACAGCTAATC +
Preference number: 4 (lower is better)
Translates to: GLQGKAHHSSIALGWVASDQTWS*SVAQLI
Trigger: GATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATC...GGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGAATATCGCCTCTTCTaGGCCTGGCTGCATCCGATC +
Preference number: 4 (lower is better)
Translates to: PNQLLETRTLSRLHAQASEYRLF*AWLHPI
Trigger: GATCGGATGCAGCCAGGCCCAGAAGAGGCGATATTC...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS-3UTR TCA 90 bp GCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTCATCAGATTCCACAGTaGGGAACTGCCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: AAGGLSRSAFGSVPAICCHQIPQ*GTACAH
Trigger: GTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATG...ACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PQPAARDKNTLQAACSGQSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...CTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTTCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PGHSGAAVELSSQAASYCSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...ACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACATGTTGCTTTTGGTTTaGTCAAACCTGGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AGKGTSQQHCPGVGGFPDMLLLV*SNLELV
Trigger: GACCAGCTCCAGGTTTGATCAAACCAAAAGCAACAT...GTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: EGKNTSRWSFSSSGVLSTKHRRH*CHDPRG
Trigger: ACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTT...AGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGGCACCCTGTTTACTTTaGATATCTGGGGTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PQPAARDKNTLQAACSGQAPCLL*ISGVRR
Trigger: CCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGC...CTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATAACACAGGCCCTGGCTaGATCCGATCCTTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINNTGPG*IRSFVY
Trigger: GTACACAAAGGATCGGATGCAGCCAGGGCCTGTGTT...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGGGGAATACCCGCTCTTaGTGCTTCTCCTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: HQEGVVMKIADNGCAASQGNTRS*CFSSLG
Trigger: CCCCAATGAGGAGAAGCAGCAAGAGCGGGTATTCCC...CTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000434865.5
CDS-3UTR GCA 90 bp AGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCACAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 4 (lower is better)
Translates to: RERHITAALPWGGWLPRPQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...TGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GGCCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTAAGGCGGATATACTaGGTCATCACCATGGCATTG +
Preference number: 4 (lower is better)
Translates to: GQATQGRQWSCHLRQLHIVRRIY*VITMAL
Trigger: CAATGCCATGGTGATGACCCAGTATATCCGCCTTAC...AATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATTCCAAACACAGGCCCTaGCTGCATCCGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINSKHRP*LHPILC
Trigger: ACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGA...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000449221.5
CDS-3UTR CCA 90 bp AAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCGAGCTTTTCCTCTTCTaGGGTTCTCTCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: KVVAAGGLSRSAFGSVPAELFLF*GSLHCQ
Trigger: CTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTC...GGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCTACCCGCTGGACTCCTaGAGAATATCGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NQLLETRTLSRLHAQASAYPLDS*RISPLL
Trigger: CAGAAGAGGCGATATTCTCCAGGAGTCCAGCGGGTA...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377079.8
ENST00000446780.5
CDS-3UTR TCA 90 bp GAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAAGTACTCGAACGTTTaGCCCGCCCCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: EGVVMKIADNGCAASQLCKYSNV*PAPTCC
Trigger: ACAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTT...ACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp AGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATAGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 4 (lower is better)
Translates to: RRTPGTSMQSLHSCLPSIVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...TATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: AAVELSSQAASYCPLRARAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...TCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp AGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 4 (lower is better)
Translates to: RPLRGGSGAVISGSFILSLHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...GGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGGGAGAAAAAGACGATaGGGAAGAGGGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TWSWSVAQLIHGIHDVFQGRKRR*GRGPGH
Trigger: GTGGCCTGGCCCTCTTCCTCATCGTCTTTTTCTCCC...CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCCTAATGAAGGCCAGTaGAACGCAGGTGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ADSGHFNAVPPLMLAINIPNEGQ*NAGVFC
Trigger: GCAGAACACACCTGCGTTTCACTGGCCTTCATTAGG...GATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR TCA 90 bp CCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCATGCTAGGGAACAGTaGTCCAAAGCAGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PGHSGAAVELSSQAASYCHAREQ*SKAESH
Trigger: ATGGCTTTCTGCTTTGGATCACTGTTCCCTAGCATG...ACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR TCA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACGGGCCTGAAGAGACTTaGTTGGGAAGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHGPEET*LGRPWT
Trigger: TGTCCATGGCCTTCCCAATCAAGTCTCTTCAGGCCC...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp GGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCAGGGCCTGAAGAGACTTaGTTGGGAAGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: GLRALQCSPSTHACHQYPGPEET*LGRPWT
Trigger: TGTCCATGGCCTTCCCAATCAAGTCTCTTCAGGCCC...TGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR GCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQKHRRH*CHDPRG
Trigger: ACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTT...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LSTEGKNTSRWSFSSSGVKHRRH*CHDPRG
Trigger: ACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTT...AACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GSFILSTEGKNTSRWSFSKHRRH*CHDPRG
Trigger: ACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTT...GGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp AAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KVVAAGGLSRSAFGSVPAAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...GGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGAACACAGGCCCTGGCTaGATCCGATCCTTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: HQEGVVMKIADNGCAASQNTGPG*IRSFVY
Trigger: GTACACAAAGGATCGGATGCAGCCAGGGCCTGTGTT...CTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCATGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GHSGAAVELSSQAASYCPCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp AAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KWWQQEGSVEALSALFLPCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...TGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATACTCTCCAGGCTGCATaGTCAGGCCAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGHFNAVPPLMLAINIHHTLQAA*SGQCLL
Trigger: GAGCAGGCACTGGCCTGAGCATGCAGCCTGGAGAGT...ATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp ACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TWSWSVAQLIHGIHDVFQEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp ACAAAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTCCCACATGGAAGGACTaGAGGGAAAGGCACATCACA +
Preference number: 4 (lower is better)
Translates to: TKVVAAGGLSRSAFGSVPPTWKD*RERHIT
Trigger: TGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGG...AGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTTTCTCTTCACACCTCTaGTCCCACATGGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: PNQLLETRTLSRLHAQASFSSHL*SHMEGL
Trigger: CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTCTGGAGCTGGTCAGTTaGACAGCTAATCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: PNQLLETRTLSRLHAQASLELVS*TANPWH
Trigger: ATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAG...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCTGGAGCTGGTCAGTTaGACAGCTAATCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: QPAARDKNTLQAACSGQCLELVS*TANPWH
Trigger: ATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAG...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACCTCTTCTGGGCCTCTTaGTGCTTCTCCTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHLFWAS*CFSSLG
Trigger: CCCCAATGAGGAGAAGCAGCAAGAGGCCCAGAAGAG...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377079.8
CDS-3UTR GCA 90 bp GCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAACCACACCAGGAATACTaGATTCACTTCTTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: AGGLRALQCSPSTHACHQPHQEY*IHFLSP
Trigger: TGGCGACAAGAAGTGAATGCAGTATTCCTGGTGTGG...TTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp GTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTACTGGGTCATCACCATaGCATTGCCCATCAGATTCC +
Preference number: 4 (lower is better)
Translates to: VAAGGLSRSAFGSVPAICTGSSP*HCPSDS
Trigger: GGAATCTGATGGGCAATGCCATGGTGATGACCCAGT...ACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp ATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACCCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: MPLDVANHQEGVVMKIADPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...GTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR CCA 90 bp TCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: SGHFNAVPPLMLAINIHHSIALG*VASQTR
Trigger: TCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCT...ATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ANHQEGVVMKIADNGCAATSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...GGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CTCAGAGTTCCAGGCCCTCCAAGGAGACTCTGGCCTGTAACTGATTTAATCCCAAAGTACTCGAACGTTTaGCCCGCCCCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRVPGPPRRLWPVTDLIPKYSNV*PAPTCC
Trigger: ACAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTT...TGGGATTAAATCAGTTACAGGCCAGAGTCTCCTTGGAGGGCCTGGAACTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp GGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: GSFILSTEGKNTSRWSFSLRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...GGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 4 (lower is better)
Translates to: QPAARDKNTLQAACSGQCLHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGGAGAAAAAGACGATaGGGAAGAGGGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQGRKRR*GRGPGH
Trigger: GTGGCCTGGCCCTCTTCCTCATCGTCTTTTTCTCCC...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp ATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACGGGAGAAAAAGACGATaGGGAAGAGGGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MPLDVANHQEGVVMKIADGRKRR*GRGPGH
Trigger: GTGGCCTGGCCCTCTTCCTCATCGTCTTTTTCTCCC...GTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp AGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACAGGGAGAAAAAGACGATaGGGAAGAGGGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SGAVISGSFILSTEGKNTGRKRR*GRGPGH
Trigger: GTGGCCTGGCCCTCTTCCTCATCGTCTTTTTCTCCC...TGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATACTCTGGCCTGTAACTaGTTTAATCCCAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINTLACN*FNPRAV
Trigger: TACTGCCCTGGGATTAAATCAGTTACAGGCCAGAGT...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR GCA 90 bp GAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCGGCTTCGACAGCGAGTaGTCCCGTTTCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: EYSPQPAARDKNTLQAACGFDSE*SRFKYS
Trigger: CGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCC...GCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCGGCTTCGACAGCGAGTaGTCCCGTTTCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLGFDSE*SRFKYS
Trigger: CGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCC...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCAGGCTTCGACAGCGAGTaGTCCCGTTTCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: LRARTHLDGAFPLLGFSPGFDSE*SRFKYS
Trigger: CGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCC...TGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCGTGAGGAACTGCCTGTaGCCACACCCTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAVRNCL*PHPGRA
Trigger: AGCCCTACCAGGGTGTGGGCACAGGCAGTTCCTCAC...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCTCATCACCATGGCATTaGCCATCAGATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: QPAARDKNTLQAACSGQCSSPWH*PSDSTV
Trigger: CACTGTGGAATCTGATGGGCAATGCCATGGTGATGA...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NQLLETRTLSRLHAQASAAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATACTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: RRTPGTSMQSLHSCLPSILCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...TATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 4 (lower is better)
Translates to: SGHFNAVPPLMLAINIHHAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...ATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 4 (lower is better)
Translates to: EGSVEALSALFLPFVVEYAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...ATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 4 (lower is better)
Translates to: LSTEGKNTSRWSFSSSGVACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...AACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 4 (lower is better)
Translates to: EGSVEALSALFLPFVVEYACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...ATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: DVANHQEGVVMKIADNGCEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...ACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAACATCACAGCAGCATTaGCCTGGGGTGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRTSQQH*PGVGGF
Trigger: GAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGT...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTACATCACAGCAGCATTaGCCTGGGGTGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VTEYSPQPAARDKNTLQATSQQH*PGVGGF
Trigger: GAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGT...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGACATCACAGCAGCATTaGCCTGGGGTGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PVTEYSPQPAARDKNTLQTSQQH*PGVGGF
Trigger: GAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGT...CTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCCCCACATGGAAGGACTaGAGGGAAAGGCACATCACA +
Preference number: 4 (lower is better)
Translates to: ANHQEGVVMKIADNGCAAPTWKD*RERHIT
Trigger: TGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGG...GGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGATTCTCTTCACACCTCTaGTCCCACATGGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: AAVELSSQAASYCPLRARFSSHL*SHMEGL
Trigger: CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA...TCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGTTCTCTTCACACCTCTaGTCCCACATGGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: GVVMKIADNGCAASQLCRFSSHL*SHMEGL
Trigger: CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA...CCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTGAGGGTTGGGTCAAATaGAAAACCCAACGAATGGAT +
Preference number: 4 (lower is better)
Translates to: PGHSGAAVELSSQAASYCEGWVK*KTQRMD
Trigger: ATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTC...ACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR GCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCAACGCAGGTGTGTTCTaGAGCCCCAGGCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: CGFKTEVEGPSESNNTAANAGVF*SPRPQQ
Trigger: CTGTTGGGGCCTGGGGCTGCAGAACACACCTGCGTT...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCGCACTCAGGCTGTGCTaGTCAATGACAGTGAACTCT +
Preference number: 4 (lower is better)
Translates to: ADSGHFNAVPPLMLAINIALRLC*SMTVNS
Trigger: AGAGTTCACTGTCATTGAGCAGCACAGCCTGAGTGC...GATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp GTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTGTAAGGCGGATATACTaGGTCATCACCATGGCATTG +
Preference number: 4 (lower is better)
Translates to: VAAGGLSRSAFGSVPAICVRRIY*VITMAL
Trigger: CAATGCCATGGTGATGACCCAGTATATCCGCCTTAC...ACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp ATCCAAATGCCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGAGTCCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: IQMPFPAQVAHREDNEWSPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...ACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp AGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCCTCAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: RKVRQGRSFHPGFQRKLLSIALG*VASQTR
Trigger: TCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCT...GAGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CCAGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGHSGAAVELSSQAASYCNNTAA*AMKFCS
Trigger: AGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTT...ACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCGATCAAACCTGGAGCTaGTCAGTTGCACAGCTAATC +
Preference number: 4 (lower is better)
Translates to: QPAARDKNTLQAACSGQCDQTWS*SVAQLI
Trigger: GATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATC...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCAGAATATCGCCTCTTCTaGGCCTCTTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLRALQCSPSTHACHQYPEYRLF*ASCCFS
Trigger: GGAGAAGCAGCAAGAGGCCCAGAAGAGGCGATATTC...TGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449221.5
3UTR CAA 72 bp CAGGCCCTGGCTGCATCCGATCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QALAASDPLCTR*PSHPHADSSFL
Trigger: AAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
3UTR CAA 72 bp TGTTTCCAAACACAGGCCCTGGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGCCATCCCCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: CFQTQALAASDP*CTRLPSHPHAD
Trigger: ATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR TCA 90 bp AGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGAAGTACTCGAACGTTTaGCCCGCCCCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGLGQMQNPTNGWSESLWKYSNV*PAPTCC
Trigger: ACAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTT...CCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp CATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCCATCAGATTCCACAGTaGGGAACTGCCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: HHNHVNSLHTSAPTWKDCHQIPQ*GTACAH
Trigger: GTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATG...GCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: EGVVMKIADNGCAASQLCLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...ACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCGGGAGAAAAAGACGATaGGGAAGAGGGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TPVTEYSPQPAARDKNTLGRKRR*GRGPGH
Trigger: GTGGCCTGGCCCTCTTCCTCATCGTCTTTTTCTCCC...GAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ANHQEGVVMKIADNGCAASIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...GGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAGGGCCTGAAGAGACTTaGTTGGGAAGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRGPEET*LGRPWT
Trigger: TGTCCATGGCCTTCCCAATCAAGTCTCTTCAGGCCC...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp ACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCCCAGGGCAGTAAGGTaGGCAGCATGTAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: TPVTEYSPQPAARDKNTLPRAVR*AACNPL
Trigger: CAAGGGGTTACATGCTGCTCACCTTACTGCCCTGGG...GAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp GCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: AVPPLMLAINIHHYRQMPKHRRH*CHDPRG
Trigger: ACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTT...AGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAAACACAGGCCCTGGCTaGATCCGATCCTTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSNTGPG*IRSFVY
Trigger: GTACACAAAGGATCGGATGCAGCCAGGGCCTGTGTT...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGGGGAATACCCGCTCTTaGTGCTTCTCCTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLGNTRS*CFSSLG
Trigger: CCCCAATGAGGAGAAGCAGCAAGAGCGGGTATTCCC...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp TCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATCTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: SGHFNAVPPLMLAINIHHLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...ATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp ATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACCTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: MPLDVANHQEGVVMKIADLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...GTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 4 (lower is better)
Translates to: SSQAASYCPLRARTHLDGAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...TCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCAGAGAGGCATCCAAATaGCTTTCCCAGCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ANHQEGVVMKIADNGCAAREASK*LSQLRL
Trigger: CAACCTGAGCTGGGAAAGGCATTTGGATGCCTCTCT...GGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR GCA 90 bp GGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCAACGCAGGTGTGTTCTaGAGCCCCAGGCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: GTSMQSLHSCLPSISIIINAGVF*SPRPQQ
Trigger: CTGTTGGGGCCTGGGGCTGCAGAACACACCTGCGTT...GATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp GTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: VMKIADNGCAASQLCRPPFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...GGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACAGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGAVISGSFILSTEGKNTEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...TGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp GACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DVANHQEGVVMKIADNGCEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...ACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCGAGCTTTTCCTCTTCTaGGGTTCTCTCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: ANHQEGVVMKIADNGCAAELFLF*GSLHCQ
Trigger: CTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTC...GGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QADSGHFNAVPPLMLAINKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACTCAGGGGCGGCAGTaGAGCTGTCATCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSTQGRQ*SCHLRQ
Trigger: CTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGT...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp GGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCACTCAGGGGCGGCAGTaGAGCTGTCATCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTSMQSLHSCLPSISIIITQGRQ*SCHLRQ
Trigger: CTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGT...GATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: PNQLLETRTLSRLHAQASSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CATCATTATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: HHYRQMPLDVANHQEGVVSIALG*VASQTR
Trigger: TCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCT...TACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCAACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VANHQEGVVMKIADNGCATSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...TGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NQLLETRTLSRLHAQASANNTAA*AMKFCS
Trigger: AGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTT...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGTGGTCAGAAAGCCTGTaGTGTTACCAGTTTTTAATT +
Preference number: 4 (lower is better)
Translates to: LQGKAHHSSIALGWVASQWSESL*CYQFLI
Trigger: AATTAAAAACTGGTAACACCACAGGCTTTCTGACCA...CTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCTTTCAGCACTCAAAGTaGGATTCCAAAAATCGTAAC +
Preference number: 4 (lower is better)
Translates to: GLQGKAHHSSIALGWVASFQHSK*DSKNRN
Trigger: GTTACGATTTTTGGAATCCCACTTTGAGTGCTGAAA...GGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTACCCGCTGGACTCCTaGAGAATATCGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLYPLDS*RISPLL
Trigger: CAGAAGAGGCGATATTCTCCAGGAGTCCAGCGGGTA...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp CAACCATGGGAATGCGGGGTCCCTGCATTCAAAACTCCAGTGACAGAATATAGTAAGTACTCGAACGTTTaGCCCGCCCCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QPWECGVPAFKTPVTEYSKYSNV*PAPTCC
Trigger: ACAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTT...ACTATATTCTGTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCCCATGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTAAGTACTCGAACGTTTaGCCCGCCCCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAASYCPLRARTHLDGAFKYSNV*PAPTCC
Trigger: ACAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTT...AAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 4 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp TCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 4 (lower is better)
Translates to: SGHFNAVPPLMLAINIHHVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...ATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGAGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: AVISGSFILSTEGKNTSRAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...TCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCATCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp GTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: VKCKTQRMDGQKACGVTSLRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...ACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp CCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: PQPAARDKNTLQAACSGQKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...CTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CATTATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGGGGAGAAAAAGACGATaGGGAAGAGGGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HYRQMPLDVANHQEGVVMGRKRR*GRGPGH
Trigger: GTGGCCTGGCCCTCTTCCTCATCGTCTTTTTCTCCC...CATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QPAARDKNTLQAACSGQCHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR TCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGACCTAATGAAGGCCAGTaGAACGCAGGTGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRPNEGQ*NAGVFC
Trigger: GCAGAACACACCTGCGTTTCACTGGCCTTCATTAGG...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp GAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTACTTCACTGAGGGCCTaGAGAGACTTGATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EGKNTSRWSFSSSGVLSTTSLRA*RDLIGK
Trigger: CTTCCCAATCAAGTCTCTTCAGGCCCTCAGTGAAGT...AGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR TCA 90 bp CACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCAGACTTGGAACATaGGAACAGCAACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: HQEGVVMKIADNGCAASQLRLGT*EQQLSL
Trigger: AAGAGACAGTTGCTGTTCTCATGTTCCAAGTCTGAG...CTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR GCA 90 bp GCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAAAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: AAWAMKFCSVILASQPRKKHRRH*CHDPRG
Trigger: ACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTT...TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGATGGCTTCGACAGCGAGTaGTCCCGTTTCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: GSVEALSALFLPFVVEYDGFDSE*SRFKYS
Trigger: CGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCC...ATCATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp ATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGTCATCACCATGGCATTaGCCATCAGATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: IVPNQLLETRTLSRLHAQSSPWH*PSDSTV
Trigger: CACTGTGGAATCTGATGGGCAATGCCATGGTGATGA...CTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATCACCATGGCATTaGCCATCAGATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GLRALQCSPSTHACHQYPSSPWH*PSDSTV
Trigger: CACTGTGGAATCTGATGGGCAATGCCATGGTGATGA...TGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp ATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IVPNQLLETRTLSRLHAQAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...CTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp ATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGCAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 4 (lower is better)
Translates to: IVPNQLLETRTLSRLHAQQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...CTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VTEYSPQPAARDKNTLQAGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: EGSVEALSALFLPFVVEYAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...ATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTCCCACATGGAAGGACTaGAGGGAAAGGCACATCACA +
Preference number: 4 (lower is better)
Translates to: VEGPSESNNTAAWAMKFCPTWKD*RERHIT
Trigger: TGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGG...ACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGCCAGCACTCAGGCTGTaGTGCTCAATGACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: RGLGQMQNPTNGWSESLWPALRL*CSMTVN
Trigger: GTTCACTGTCATTGAGCAGCACAGCCTGAGTGCTGG...CCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCGAAGGAGTAACATCCTaGACCCATCCCGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAEGVTS*THPEPT
Trigger: TGTCGGCTCGGGATGGGTCCAGGATGTTACTCCTTC...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CAACCATGGGAATGCGGGGTCCCTGCATTCAAAACTCCAGTGACAGAATATAGTGAAGGAGTAACATCCTaGACCCATCCCGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: QPWECGVPAFKTPVTEYSEGVTS*THPEPT
Trigger: TGTCGGCTCGGGATGGGTCCAGGATGTTACTCCTTC...ACTATATTCTGTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCCCATGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: NQLLETRTLSRLHAQASAFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATCCAAACACAGGCCCTaGCTGCATCCGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AVISGSFILSTEGKNTSRSKHRP*LHPILC
Trigger: ACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGA...TCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000449221.5
CDS-3UTR CCA 90 bp ACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCGAAGATTGCGGACAATaGCTGTGCAGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TPVTEYSPQPAARDKNTLEDCGQ*LCSLPA
Trigger: AGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTC...GAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp ACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCGAGCTTTTCCTCTTCTaGGGTTCTCTCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: TPGTSMQSLHSCLPSISIELFLF*GSLHCQ
Trigger: CTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTC...GATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp GCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ADSGHFNAVPPLMLAINIKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...GATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp CACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTACTCAGGGGCGGCAGTaGAGCTGTCATCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HFNAVPPLMLAINIHHYRTQGRQ*SCHLRQ
Trigger: CTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGT...ACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp ACAAAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TKVVAAGGLSRSAFGSVPSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...AGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp CAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTACAGCAGCATTGCCCTaGGGTGGGTGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QMQNPTNGWSESLWCYQFTAALP*GGWLPR
Trigger: TCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGT...AAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTTGTTGCTCTCAGACTTaGAACATGAGAACAGCAACT +
Preference number: 4 (lower is better)
Translates to: PNQLLETRTLSRLHAQASCCSQT*NMRTAT
Trigger: AGTTGCTGTTCTCATGTTCCAAGTCTGAGAGCAACA...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGGAATATCGCCTCTTCTaGGCCTCTTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLEYRLF*ASCCFS
Trigger: GGAGAAGCAGCAAGAGGCCCAGAAGAGGCGATATTC...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377079.8
CDS-3UTR CCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCCGCCTCTTCTGGGCCTaGCTGCATCCGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VKQHGSLGYEILFCDFGIRLFWA*LHPILC
Trigger: ACAAAGGATCGGATGCAGCCAGGCCCAGAAGAGGCG...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS-3UTR TCA 90 bp CACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: HGSLGYEILFCDFGITTTLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...CGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp ACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 4 (lower is better)
Translates to: TPVTEYSPQPAARDKNTLVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...GAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGATGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 4 (lower is better)
Translates to: GSVEALSALFLPFVVEYDVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...ATCATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ATCCAAATGCCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGAGTGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: IQMPFPAQVAHREDNEWSAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...ACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp CAACCATGGGAATGCGGGGTCCCTGCATTCAAAACTCCAGTGACAGAATATAGTGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: QPWECGVPAFKTPVTEYSAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...ACTATATTCTGTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCCCATGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGTCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PVTEYSPQPAARDKNTLQSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...CTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTTCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VTEYSPQPAARDKNTLQASSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTCTTGACGTAGCGCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LMLAINIHHYRQMPLDVALRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...CGCTACGTCAAGAGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCCTGAGAGATCCCCAGTaGTGGAGGAGGTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: TSMQSLHSCLPSISIIIVLRDPQ*WRRCRS
Trigger: ACTTCGGCACCTCCTCCATCACTGGGGATCTCTCAG...GACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: VAAGGLSRSAFGSVPAICKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...ACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 4 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLLHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTCAGTTCAAAGTAGAAGGGCCTTCTaGGTCAAACAACACGGCAGC +
Preference number: 4 (lower is better)
Translates to: THLDGAFPLLGFSPLSVQSRRAF*VKQHGS
Trigger: GCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACT...TTGAACTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAACTCTGGCCTGTAACTaGTTTAATCCCAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSTLACN*FNPRAV
Trigger: TACTGCCCTGGGATTAAATCAGTTACAGGCCAGAGT...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCAGGCTTCGACAGCGAGTaGTCCCGTTTCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPGFDSE*SRFKYS
Trigger: CGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCC...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGACTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRLCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: EGSVEALSALFLPFVVEYLCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...ATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp CTCAGAGTTCCAGGCCCTCCAAGGAGACTCTGGCCTGTAACTGATTTAATCCCATGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRVPGPPRRLWPVTDLIPCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...TGGGATTAAATCAGTTACAGGCCAGAGTCTCCTTGGAGGGCCTGGAACTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp GAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCCAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 4 (lower is better)
Translates to: EYSPQPAARDKNTLQAACQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...GCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCCTCCGGGCACTTCAATaGAGTCCCTCCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSLRALQ*SPSTHA
Trigger: AGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAG...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp GCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAAGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 4 (lower is better)
Translates to: AAWAMKFCSVILASQPRKAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AAAACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KTPVTEYSPQPAARDKNTEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...AGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp ACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCGAACACTCTCCAGGCTaGATGCTCAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TSMQSLHSCLPSISIIIVEHSPG*MLRPVP
Trigger: AGGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTC...GACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp ACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: TPVTEYSPQPAARDKNTLAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...GAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: SSQAASYCPLRARTHLDGAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...TCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATCTGGAGCTGGTCAGTTaGACAGCTAATCCATGGCAT +
Preference number: 4 (lower is better)
Translates to: SGHFNAVPPLMLAINIHHLELVS*TANPWH
Trigger: ATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAG...ATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR GCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAGCACTCAGGCTGTGCTaGTCAATGACAGTGAACTCT +
Preference number: 4 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRALRLC*SMTVNS
Trigger: AGAGTTCACTGTCATTGAGCAGCACAGCCTGAGTGC...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp CATCATTATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTACTCTTCTGGGCCTCTTaGTGCTTCTCCTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: HHYRQMPLDVANHQEGVVLFWAS*CFSSLG
Trigger: CCCCAATGAGGAGAAGCAGCAAGAGGCCCAGAAGAG...TACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449221.5
CDS-3UTR GCA 90 bp GCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCTGTACAAAATCACAGTaGAGCCACACCAGGAATACT +
Preference number: 4 (lower is better)
Translates to: ADSGHFNAVPPLMLAINICTKSQ*SHTRNT
Trigger: AGTATTCCTGGTGTGGCTGCACTGTGATTTTGTACA...GATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGACTGGGTCATCACCATaGCATTGCCCATCAGATTCC +
Preference number: 4 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLTGSSP*HCPSDS
Trigger: GGAATCTGATGGGCAATGCCATGGTGATGACCCAGT...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTGAGCTTTTCCTCTTCTaGGGTTCTCTCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASELFLF*GSLHCQ
Trigger: CTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTC...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp ATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: IVPNQLLETRTLSRLHAQKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...CTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp TTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAACCCCATGCACAACCATaGGAATGCGGGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FNAVPPLMLAINIHHYRQPHAQP*ECGVPA
Trigger: TGCAGGGACCCCGCATTCCCATGGTTGTGCATGGGG...TTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR CCA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHNNTAA*AMKFCS
Trigger: AGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTT...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAAACCCAACGAATGGATaGTCAGAAAGCCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSNPTNG*SESLWC
Trigger: ACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCCTGAAGAGACTTGATTaGGAAGGCCATGGACATGCC +
Preference number: 4 (lower is better)
Translates to: HHNHVNSLHTSAPTWKDCLKRLD*EGHGHA
Trigger: GGCATGTCCATGGCCTTCCCAATCAAGTCTCTTCAG...GCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCGATCAAACCTGGAGCTaGTCAGTTGCACAGCTAATC +
Preference number: 4 (lower is better)
Translates to: EYSPQPAARDKNTLQAACDQTWS*SVAQLI
Trigger: GATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATC...GCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp ACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGTGGTTTGATCAAACCTaGAGCTGGTCAGTTGCACAG +
Preference number: 4 (lower is better)
Translates to: TWSWSVAQLIHGIHDVFQWFDQT*SWSVAQ
Trigger: CTGTGCAACTGACCAGCTCCAGGTTTGATCAAACCA...CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTTACCCGCTGGACTCCTaGAGAATATCGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QAASYCPLRARTHLDGAFYPLDS*RISPLL
Trigger: CAGAAGAGGCGATATTCTCCAGGAGTCCAGCGGGTA...AAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp AAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACACATCAGATTCCACAGTaGGGAACTGCCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KQHGSLGYEILFCDFGITHQIPQ*GTACAH
Trigger: GTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATG...TGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp TCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGATACCGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: SVEALSALFLPFVVEYDTAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...GGTATCATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 4 (lower is better)
Translates to: MPLDVANHQEGVVMKIADLHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...GTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ATCCAAATGCCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGAGTTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IQMPFPAQVAHREDNEWSSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...ACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp ATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGTCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ILSTEGKNTSRWSFSSSGSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCAGTAGAAGGGCCTTCTaGGTCAAACAACACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSSRRAF*VKQHGS
Trigger: GCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACT...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCCCTAATGAAGGCCAGTaGAACGCAGGTGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSPNEGQ*NAGVFC
Trigger: GCAGAACACACCTGCGTTTCACTGGCCTTCATTAGG...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp GAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCAATCCATGGCATCCATaGTGTCTTCCAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ELSSQAASYCPLRARTHLNPWHP*CLPGFS
Trigger: AGAGAAGCCTGGAAGACATCATGGATGCCATGGATT...GAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR GCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCGCACCCTGTTTACTTTaGATATCTGGGGTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAAPCLL*ISGVRR
Trigger: CCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGC...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTEYSPQPAARDKNTLQAAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VEGPSESNNTAAWAMKFCAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...ACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACAACACAGGCCCTGGCTaGATCCGATCCTTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: GQYPSPRCKKKASLHFQHNTGPG*IRSFVY
Trigger: GTACACAAAGGATCGGATGCAGCCAGGGCCTGTGTT...GTGCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp AAAACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTGGGAATACCCGCTCTTaGTGCTTCTCCTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: KTPVTEYSPQPAARDKNTGNTRS*CFSSLG
Trigger: CCCCAATGAGGAGAAGCAGCAAGAGCGGGTATTCCC...AGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000434524.5
ENST00000434865.5
CDS-3UTR GCA 90 bp CATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCTGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HHNHVNSLHTSAPTWKDCCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...GCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGTGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp ACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEYSPQPAARDKNTLQAACRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...TGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATTGTCGTAATGAAGATTaGGGACAATGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EGSVEALSALFLPFVVEYCRNED*GQWLCS
Trigger: GCTGCACAGCCATTGTCCGCAATCTTCATTACGACA...ATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGACAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 4 (lower is better)
Translates to: AVISGSFILSTEGKNTSRQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...TCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp AATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTGCTCAGGCCAGTGCCTaGTCCTTCCATACCTCATGG +
Preference number: 4 (lower is better)
Translates to: NAKPNEWMVRKPVVLPVFAQASA*SFHTSW
Trigger: CCATGAGGTATGGAAGGAGCAGGCACTGGCCTGAGC...AAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp AGTGGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCAGCATGCTCAGGCCAGTaGCTGCTCCTTCCATACCTC +
Preference number: 4 (lower is better)
Translates to: SGIPKIVTTKHAAKQALAACSGQ*LLLPYL
Trigger: GAGGTATGGAAGGAGCAGGCACTGGCCTGAGCATGC...TGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp TTTGATCAAACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: FDQTWSWSVAQLIHGIHDGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...ATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp CATCATTATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAGGAATGCGGGGTCCCTaGATTCAAAACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: HHYRQMPLDVANHQEGVVGMRGP*IQNSSD
Trigger: GTCACTGGAGTTTTGAATGCAGGGACCCCGCATTCC...TACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR GCA 90 bp TTTGATCAAACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: FDQTWSWSVAQLIHGIHDAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...ATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp TTTGATCAAACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATCCCACATGGAAGGACTaGAGGGAAAGGCACATCACA +
Preference number: 4 (lower is better)
Translates to: FDQTWSWSVAQLIHGIHDPTWKD*RERHIT
Trigger: TGTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGG...ATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GAAAGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCCCAGCACTCAGGCTGTaGTGCTCAATGACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: ERKVRQGRSFHPGFQRKLPALRL*CSMTVN
Trigger: GTTCACTGTCATTGAGCAGCACAGCCTGAGTGCTGG...GAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp TATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGTCTTCTGGGCCTGGCTaGATCCGATCCTTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: YRQMPLDVANHQEGVVMKSSGPG*IRSFVY
Trigger: GTACACAAAGGATCGGATGCAGCCAGGCCCAGAAGA...CTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS-3UTR CCA 90 bp ACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCGAAGGAGTAACATCCTaGACCCATCCCGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: TSMQSLHSCLPSISIIIVEGVTS*THPEPT
Trigger: TGTCGGCTCGGGATGGGTCCAGGATGTTACTCCTTC...GACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp ACTCCCAGTCTCTCAGGAAACATGGACTTGTACAAAATCACAGTGCAGCCACACACTGGGTCATCACCATaGCATTGCCCATCAGATTCC +
Preference number: 4 (lower is better)
Translates to: TPSLSGNMDLYKITVQPHTGSSP*HCPSDS
Trigger: GGAATCTGATGGGCAATGCCATGGTGATGACCCAGT...GTGTGGCTGCACTGTGATTTTGTACAAGTCCATGTTTCCTGAGAGACTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTGTAAGGCGGATATACTaGGTCATCACCATGGCATTG +
Preference number: 4 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASVRRIY*VITMAL
Trigger: CAATGCCATGGTGATGACCCAGTATATCCGCCTTAC...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GAAAGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCTCCAAACACAGGCCCTaGCTGCATCCGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ERKVRQGRSFHPGFQRKLSKHRP*LHPILC
Trigger: ACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGA...GAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCTCCAAACACAGGCCCTaGCTGCATCCGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VKQHGSLGYEILFCDFGISKHRP*LHPILC
Trigger: ACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGA...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCATCCAAACACAGGCCCTaGCTGCATCCGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPSKHRP*LHPILC
Trigger: ACAAAGGATCGGATGCAGCCAGGGCCTGTGTTTGGA...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp ACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TWSWSVAQLIHGIHDVFQKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCATCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: LRARTHLDGAFPLLGFSPSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...TGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCTGGTCAGAAAGCCTGTaGTGTTACCAGTTTTTAATT +
Preference number: 4 (lower is better)
Translates to: NQLLETRTLSRLHAQASAWSESL*CYQFLI
Trigger: AATTAAAAACTGGTAACACCACAGGCTTTCTGACCA...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGAACCCAACGAATGGATaGTCAGAAAGCCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQNPTNG*SESLWC
Trigger: ACACCACAGGCTTTCTGACCATCCATTCGTTGGGTT...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTGCAAAACCCAACGAATaGATGGTCAGAAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASAKPNE*MVRKPV
Trigger: CACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGC...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp CATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCTGGTTTGATCAAACCTaGAGCTGGTCAGTTGCACAG +
Preference number: 4 (lower is better)
Translates to: HHNHVNSLHTSAPTWKDCWFDQT*SWSVAQ
Trigger: CTGTGCAACTGACCAGCTCCAGGTTTGATCAAACCA...GCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CAA 72 bp TGGTTTCCAAAGAAAGCTCCTCAGGTAGGCAGAGGGTaGGGTCAAATGCAAAACCCAACGAATGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: WFPKKAPQVGRG*GQMQNPTNGWS
Trigger: TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGGAGCTTTCTTTGGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CAA 72 bp AACAGAGAGGCATCCAAATGCCTTTCCCAGCTCAGGTaGCACACAGAGAGGACAATGAATGGAGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: NREASKCLSQLR*HTERTMNGVKG
Trigger: TCCTTTCACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGATGCCTCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
3UTR CAA 72 bp ACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTaGCCATCAATATCCATCATTATCGTCAAATGCCTC +
Preference number: 4 (lower is better)
Translates to: TPGTSMQSLHSC*PSISIIIVKCL
Trigger: GAGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
3UTR CAA 72 bp GATTGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTGCACCTGCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: DCQAIPMQILLS*SMDFEVHLQLP
Trigger: TGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR TCA 90 bp GTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: VKCKTQRMDGQKACGVTSLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...ACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp GCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: AVPPLMLAINIHHYRQMPLVHGF*SAPATP
Trigger: GGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAG...AGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp ATCCAAATGCCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGAGTCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 4 (lower is better)
Translates to: IQMPFPAQVAHREDNEWSLHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...ACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp AGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCCTCCATGCTAGGGAACAGTaGTCCAAAGCAGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RKVRQGRSFHPGFQRKLLHAREQ*SKAESH
Trigger: ATGGCTTTCTGCTTTGGATCACTGTTCCCTAGCATG...GAGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCCATGCTAGGGAACAGTaGTCCAAAGCAGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAHAREQ*SKAESH
Trigger: ATGGCTTTCTGCTTTGGATCACTGTTCCCTAGCATG...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp CCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGATGTTGCTTTTGGTTTaGTCAAACCTGGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PVTEYSPQPAARDKNTLQMLLLV*SNLELV
Trigger: GACCAGCTCCAGGTTTGATCAAACCAAAAGCAACAT...CTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGATGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GSVEALSALFLPFVVEYDAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...ATCATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: AVPPLMLAINIHHYRQMPLCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...AGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GTSMQSLHSCLPSISIIILCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...GATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTCTCTTCACACCTCTaGTCCCACATGGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: VKCKTQRMDGQKACGVTSFSSHL*SHMEGL
Trigger: CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA...ACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAATGATGAGGGTCTGTTaGTCTCAGACTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRMMRVC*SQTWNM
Trigger: CATGTTCCAAGTCTGAGAGCAACAGACCCTCATCAT...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp ATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCATGATGAGGGTCTGTTaGTCTCAGACTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: ISGSFILSTEGKNTSRWSMMRVC*SQTWNM
Trigger: CATGTTCCAAGTCTGAGAGCAACAGACCCTCATCAT...GCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp TTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAGAAGGAGTAACATCCTaGACCCATCCCGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: FNAVPPLMLAINIHHYRQEGVTS*THPEPT
Trigger: TGTCGGCTCGGGATGGGTCCAGGATGTTACTCCTTC...TTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp GAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: EYSPQPAARDKNTLQAACFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...GCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCGAGCTTTTCCTCTTCTaGGGTTCTCTCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSELFLF*GSLHCQ
Trigger: CTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTC...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp ATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ISGSFILSTEGKNTSRWSKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...GCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp TGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTACTCAGGGGCGGCAGTaGAGCTGTCATCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WAMKFCSVILASQPRKFSTQGRQ*SCHLRQ
Trigger: CTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGT...AGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: HHNHVNSLHTSAPTWKDCSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...GCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGAVISGSFILSTEGKNTSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...TGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp GAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTAGCATTGCCCTGGGGTaGGTGGCTTCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: EWMVRKPVVLPVFNSLWISIALG*VASQTR
Trigger: TCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCT...AATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTAACAACACGGCAGCCTaGGCTATGAAATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VTEYSPQPAARDKNTLQANNTAA*AMKFCS
Trigger: AGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTT...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTGCAAAACCCAACGAATaGATGGTCAGAAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QAASYCPLRARTHLDGAFAKPNE*MVRKPV
Trigger: CACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGC...AAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCCTGAAGAGACTTGATTaGGAAGGCCATGGACATGCC +
Preference number: 4 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSLKRLD*EGHGHA
Trigger: GGCATGTCCATGGCCTTCCCAATCAAGTCTCTTCAG...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp GCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTTTTCAGCACTCAAAGTaGGATTCCAAAAATCGTAAC +
Preference number: 4 (lower is better)
Translates to: AAGGLSRSAFGSVPAICCFQHSK*DSKNRN
Trigger: GTTACGATTTTTGGAATCCCACTTTGAGTGCTGAAA...ACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp CACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGGCCAAATTTCTTCTCTaGGCAATATCCAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HGSLGYEILFCDFGITTTAKFLL*AISKPK
Trigger: CTTGGGCTTGGATATTGCCCAGAGAAGAAATTTGGC...CGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGCCAAATTTCTTCTCTaGGCAATATCCAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQAKFLL*AISKPK
Trigger: CTTGGGCTTGGATATTGCCCAGAGAAGAAATTTGGC...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp GCATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCCTCCAAGGAGACTCTaGCCTGTAACTGATTTAATC +
Preference number: 4 (lower is better)
Translates to: ASQPRKFSSHLCSHMEGLPPRRL*PVTDLI
Trigger: GATTAAATCAGTTACAGGCCAGAGTCTCCTTGGAGG...CAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp AGTGGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCAGTTGTTCACCATGGCTaGGATGTAGGGGAATACCCG +
Preference number: 4 (lower is better)
Translates to: SGIPKIVTTKHAAKQALAVVHHG*DVGEYP
Trigger: CGGGTATTCCCCTACATCTCAGCCATGGTGAACAAC...TGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp CCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: PLRARTHLDGAFPLLGFSKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...AGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp TCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: STEGKNTSRWSFSSSGVLKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...GAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: EYSPQPAARDKNTLQAACKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...GCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR TCA 90 bp TCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGATACCCTTCATATTGTCCACTaGGGGCAAGAACACATCTCG +
Preference number: 4 (lower is better)
Translates to: SVEALSALFLPFVVEYDTLHIVH*GQEHIS
Trigger: CGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAG...GGTATCATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp GCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATCCATACCTCATGGGTaGCAGTCACAAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AAWAMKFCSVILASQPRKSIPHG*QSQKWW
Trigger: CCACCACTTTTGTGACTGTCACCCATGAGGTATGGA...TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp TTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTCACACCTCTGCAGTAGAAGGGCCTTCTaGGTCAAACAACACGGCAGC +
Preference number: 4 (lower is better)
Translates to: FCSVILASQPRKFSSHLCSRRAF*VKQHGS
Trigger: GCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACT...GCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp GTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTAATCCATGGCATCCATaGTGTCTTCCAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VKCKTQRMDGQKACGVTSNPWHP*CLPGFS
Trigger: AGAGAAGCCTGGAAGACATCATGGATGCCATGGATT...ACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp AGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGCATGGTCAGACCACATaGCAAATGTTGCTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RGLGQMQNPTNGWSESLWHGQTT*QMLLLV
Trigger: AACCAAAAGCAACATTTGTCATGTGGTCTGACCATG...CCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp GCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAAGCACCCTGTTTACTTTaGATATCTGGGGTAAGGCGG +
Preference number: 4 (lower is better)
Translates to: AAWAMKFCSVILASQPRKAPCLL*ISGVRR
Trigger: CCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGC...TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCAGCCAAGCCATCCCCATaGAGATTCTTCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPAKPSP*RFFFPC
Trigger: ACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: HFNAVPPLMLAINIHHYRLCVPD*QAIPMQ
Trigger: CTGCATGGGGATGGCTTGGCAATCTGGTACACAAAG...ACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 4 (lower is better)
Translates to: GSFILSTEGKNTSRWSFSPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...GGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 4 (lower is better)
Translates to: ELSSQAASYCPLRARTHLPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...GAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGCAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 4 (lower is better)
Translates to: YRQMPLDVANHQEGVVMKQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...CTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp GGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCCAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 4 (lower is better)
Translates to: GTSMQSLHSCLPSISIIIQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...GATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp TCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAAGCACAACCATGGGAATaGGGGGTCCCTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: SMQSLHSCLPSISIIIVKAQPWE*GVPAFK
Trigger: TTTGAATGCAGGGACCCCGCATTCCCATGGTTGTGC...TTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GAAAGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCGTAAGGCGGATATACTaGGTCATCACCATGGCATTG +
Preference number: 4 (lower is better)
Translates to: ERKVRQGRSFHPGFQRKLVRRIY*VITMAL
Trigger: CAATGCCATGGTGATGACCCAGTATATCCGCCTTAC...GAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp ATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: MPLDVANHQEGVVMKIADFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...GTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp GACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: DVANHQEGVVMKIADNGCFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...ACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp ACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCCTGAAGAGACTTGATTaGGAAGGCCATGGACATGCC +
Preference number: 4 (lower is better)
Translates to: TSMQSLHSCLPSISIIIVLKRLD*EGHGHA
Trigger: GGCATGTCCATGGCCTTCCCAATCAAGTCTCTTCAG...GACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp CTCAGAGTTCCAGGCCCTCCAAGGAGACTCTGGCCTGTAACTGATTTAATCCCAGACAAATGTTGCTTTTaGTTTGATCAAACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRVPGPPRRLWPVTDLIPDKCCF*FDQTWS
Trigger: GCTCCAGGTTTGATCAAACCAAAAGCAACATTTGTC...TGGGATTAAATCAGTTACAGGCCAGAGTCTCCTTGGAGGGCCTGGAACTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp TCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATCGTCAAATGCCTCTTaGCGTAGCGAATCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SMQSLHSCLPSISIIIVKSSNAS*RSESPG
Trigger: TCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGA...TTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR TCA 90 bp AGTGGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCAACTTCACTGAGGGCCTaGAGAGACTTGATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGIPKIVTTKHAAKQALATSLRA*RDLIGK
Trigger: CTTCCCAATCAAGTCTCTTCAGGCCCTCAGTGAAGT...TGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp AATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTACTTCACTGAGGGCCTaGAGAGACTTGATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NAKPNEWMVRKPVVLPVFTSLRA*RDLIGK
Trigger: CTTCCCAATCAAGTCTCTTCAGGCCCTCAGTGAAGT...AAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp GGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCACATGTTGCTTTTGGTTTaGTCAAACCTGGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GQYPSPRCKKKASLHFQHMLLLV*SNLELV
Trigger: GACCAGCTCCAGGTTTGATCAAACCAAAAGCAACAT...GTGCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp AGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCCTCCATGGTCAGACCACATaGCAAATGTTGCTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RKVRQGRSFHPGFQRKLLHGQTT*QMLLLV
Trigger: AACCAAAAGCAACATTTGTCATGTGGTCTGACCATG...GAGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp AAAACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTTCATCACCATGGCATTaGCCATCAGATTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: KTPVTEYSPQPAARDKNTSSPWH*PSDSTV
Trigger: CACTGTGGAATCTGATGGGCAATGCCATGGTGATGA...AGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp CAGGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 4 (lower is better)
Translates to: QAASYCPLRARTHLDGAFPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...AAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp ACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 4 (lower is better)
Translates to: TPVTEYSPQPAARDKNTLPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...GAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACACAGTCCCTCCACTCATaGTTGCCATCAATATCCATC +
Preference number: 4 (lower is better)
Translates to: KQHGSLGYEILFCDFGITQSLHS*LPSISI
Trigger: GATGGATATTGATGGCAAGCATGAGTGGAGGGACTG...TGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCGAGGGTTGGGTCAAATaGAAAACCCAACGAATGGAT +
Preference number: 4 (lower is better)
Translates to: VKQHGSLGYEILFCDFGIEGWVK*KTQRMD
Trigger: ATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTC...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGTTTACTTTGCATATCTaGGGTAAGGCGGATATACTG +
Preference number: 4 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQFTLHI*GKADIL
Trigger: CAGTATATCCGCCTTACCCCAGATATGCAAAGTAAA...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCTTTACTTTGCATATCTaGGGTAAGGCGGATATACTG +
Preference number: 4 (lower is better)
Translates to: HHNHVNSLHTSAPTWKDCFTLHI*GKADIL
Trigger: CAGTATATCCGCCTTACCCCAGATATGCAAAGTAAA...GCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTAAGAACACATCTCGATaGAGCTTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AVPPLMLAINIHHYRQMPKNTSR*SFSSSG
Trigger: CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTT...AGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp TGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTACCTCTGCTCCCACATaGAAGGACTGCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WAMKFCSVILASQPRKFSTSAPT*KDCRER
Trigger: CCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGT...AGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTAAGAAGTTTCCATCCTaGTTTCCAAAGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VTEYSPQPAARDKNTLQAKKFPS*FPKKAP
Trigger: AGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTT...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp ACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCAAGAAACATCTCCACATaGTCAGACCACATGACAAAT +
Preference number: 4 (lower is better)
Translates to: TEYSPQPAARDKNTLQAARNIST*SDHMTN
Trigger: ATTTGTCATGTGGTCTGACCATGTGGAGATGTTTCT...TGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GGCAGCTTCATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCAGAAACATCTCCACATaGTCAGACCACATGACAAAT +
Preference number: 4 (lower is better)
Translates to: GSFILSTEGKNTSRWSFSRNIST*SDHMTN
Trigger: ATTTGTCATGTGGTCTGACCATGTGGAGATGTTTCT...GGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp TTTGATCAAACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATCCTCCAAGGAGACTCTaGCCTGTAACTGATTTAATC +
Preference number: 4 (lower is better)
Translates to: FDQTWSWSVAQLIHGIHDPPRRL*PVTDLI
Trigger: GATTAAATCAGTTACAGGCCAGAGTCTCCTTGGAGG...ATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGTTTGATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp GAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTGCTCATGATCATAGCTaGGGGAGCCGTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: EWMVRKPVVLPVFNSLWIAHDHS*GSRCSP
Trigger: TGGTGAACAACGGCTCCCTCAGCTATGATCATGAGC...AATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp GGGGTAGGTGTCTACAAATACTCCCAGCCCCACAAATTTGTCCATGTTTCCAAACATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: GVGVYKYSQPHKFVHVSKHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...TTTGGAAACATGGACAAATTTGTGGGGCTGGGAGTATTTGTAGACACCTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR TCA 90 bp TTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTCACACCTCTGCAATCCATGGCATCCATaGTGTCTTCCAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FCSVILASQPRKFSSHLCNPWHP*CLPGFS
Trigger: AGAGAAGCCTGGAAGACATCATGGATGCCATGGATT...GCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR GCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR GCA 90 bp AAAAGCCAAATTTCTTCTCTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGAGAGAGGCATCCAAATaGCTTTCCCAGCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KSQISSLGNIQAQGVRRKREASK*LSQLRL
Trigger: CAACCTGAGCTGGGAAAGGCATTTGGATGCCTCTCT...CTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAGAGAAGAAATTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CCA 90 bp GTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: VKCKTQRMDGQKACGVTSFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...ACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp AAAACTCCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTTCCTTCCATACCTCATaGGTGACAGTCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KTPVTEYSPQPAARDKNTSFHTS*VTVTKV
Trigger: CACTTTTGTGACTGTCACCCATGAGGTATGGAAGGA...AGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CCA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCAAGAAGTTTCCATCCTaGTTTCCAAAGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAKKFPS*FPKKAP
Trigger: AGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTT...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp AATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTTGGTTTGATCAAACCTaGAGCTGGTCAGTTGCACAG +
Preference number: 4 (lower is better)
Translates to: NAKPNEWMVRKPVVLPVFWFDQT*SWSVAQ
Trigger: CTGTGCAACTGACCAGCTCCAGGTTTGATCAAACCA...AAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp ATCCAAATGCCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGAGTGACAAATGTTGCTTTTaGTTTGATCAAACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IQMPFPAQVAHREDNEWSDKCCF*FDQTWS
Trigger: GCTCCAGGTTTGATCAAACCAAAAGCAACATTTGTC...ACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCTGTTGCTCTCAGACTTaGAACATGAGAACAGCAACT +
Preference number: 4 (lower is better)
Translates to: VKQHGSLGYEILFCDFGICCSQT*NMRTAT
Trigger: AGTTGCTGTTCTCATGTTCCAAGTCTGAGAGCAACA...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR TCA 90 bp GCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAACATTCAAAACTCCAGTaGCAGAATATAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AAWAMKFCSVILASQPRKHSKLQ*QNIVPN
Trigger: GTTGGGGACTATATTCTGTCACTGGAGTTTTGAATG...TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCATTTACTTTGCATATCTaGGGTAAGGCGGATATACTG +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPFTLHI*GKADIL
Trigger: CAGTATATCCGCCTTACCCCAGATATGCAAAGTAAA...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCAGACAAATGTTGCTTTTaGTTTGATCAAACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NTAAWAMKFCSVILASQPDKCCF*FDQTWS
Trigger: GCTCCAGGTTTGATCAAACCAAAAGCAACATTTGTC...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp GCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAAAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: AAWAMKFCSVILASQPRKKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR TCA 90 bp CCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATGCCTCTTGACAAGGAAATGACATCATaGTTATCTGAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: PPLMLAINIHHYRQMPLDKEMTS*LSERSP
Trigger: TGGGGATCTCTCAGATAATCATGATGTCATTTCCTT...GTCAAGAGGCATTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR GCA 90 bp AATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTCCCTCCACTCATGCTTaGCATCAATATCCATCATTA +
Preference number: 4 (lower is better)
Translates to: NAKPNEWMVRKPVVLPVFPSTHA*HQYPSL
Trigger: TAATGATGGATATTGATGGCAAGCATGAGTGGAGGG...AAAAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp TCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAATTCTTTCCTTGTCCATaGATTTTGAAGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SMQSLHSCLPSISIIIVKFFPCP*ILKCTC
Trigger: GCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAA...TTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CCA 90 bp GCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTCAGAGCTTTTCCTCTTCTaGGGTTCTCTCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: AMKFCSVILASQPRKFSSELFLF*GSLHCQ
Trigger: CTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTC...TGAAGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CCA 90 bp CATCATTATCGTCAAATGCCTCTTGACGTAGCGAATCACCAGGAAGGTGTCGTATGGTCAGAAAGCCTGTaGTGTTACCAGTTTTTAATT +
Preference number: 4 (lower is better)
Translates to: HHYRQMPLDVANHQEGVVWSESL*CYQFLI
Trigger: AATTAAAAACTGGTAACACCACAGGCTTTCTGACCA...TACGACACCTTCCTGGTGATTCGCTACGTCAAGAGGCATTTGACGATAATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CCA 90 bp GCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTCAGCAAAACCCAACGAATaGATGGTCAGAAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AMKFCSVILASQPRKFSSAKPNE*MVRKPV
Trigger: CACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGC...TGAAGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp TGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTCATGGTCAGACCACATaGCAAATGTTGCTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: WAMKFCSVILASQPRKFSHGQTT*QMLLLV
Trigger: AACCAAAAGCAACATTTGTCATGTGGTCTGACCATG...AGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR TCA 90 bp ATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAAACCTCAGACTTGGAACATaGGAACAGCAACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: MVRKPVVLPVFNSLWIQNLRLGT*EQQLSL
Trigger: AAGAGACAGTTGCTGTTCTCATGTTCCAAGTCTGAG...GTTTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR GCA 90 bp ATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAAACGAGGGTTGGGTCAAATaGAAAACCCAACGAATGGAT +
Preference number: 4 (lower is better)
Translates to: MVRKPVVLPVFNSLWIQNEGWVK*KTQRMD
Trigger: ATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTC...GTTTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp TGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTAAGAAGTTTCCATCCTaGTTTCCAAAGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WAMKFCSVILASQPRKFSKKFPS*FPKKAP
Trigger: AGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTT...AGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CCA 90 bp TGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTAGAAACATCTCCACATaGTCAGACCACATGACAAAT +
Preference number: 4 (lower is better)
Translates to: WAMKFCSVILASQPRKFSRNIST*SDHMTN
Trigger: ATTTGTCATGTGGTCTGACCATGTGGAGATGTTTCT...AGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS GCA 90 bp AACATCCTGGACCCATCCCGAGCCGACAAACATCGCCGCCACTGCTaGCACGACCCAAGGGGTCCCAGAGTCGCCGCCATCTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: NILDPSRADKHRRHC*HDPRGPRVAAIFPT
Trigger: GGTGGGAAAGATGGCGGCGACTCTGGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTTGTCGGCTCGGGATGGGTCCAGGATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS GCA 90 bp AGTAACATCCTGGACCCATCCCGAGCCGACAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGTCCCAGAGTCGCCGCCATCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SNILDPSRADKHRRH*CHDPRGPRVAAIFP
Trigger: GGGAAAGATGGCGGCGACTCTGGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTTGTCGGCTCGGGATGGGTCCAGGATGTTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GCCGCGGGGCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 5 (lower is better)
Translates to: AAGQADSGHFNAVPPLMLPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...AAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGCCCCGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCATGTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: ADNGCAASQLCRPPIPLMSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...CATGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp CCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGCACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PQPAARDKNTLQAACSGQHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...CTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp AGGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCCAAGTACTCGAACGTTaGACCCGCCCCGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: RPLRGGSGAVISGSFILSQVLER*TRPDLL
Trigger: CAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTTG...GGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp TTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCACCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCC +
Preference number: 5 (lower is better)
Translates to: LRTMAVQPPSSVGRPSRSPCPWI*KCTCNS
Trigger: GGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGG...TGAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: QPAARDKNTLQAACSGQCHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAGAGTTAGATGTCAAGTACTCGAACGTTaGACCCGCCCCGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: HHSSIALGWVASQTRVRCQVLER*TRPDLL
Trigger: CAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTTG...ACATCTAACTCTGGTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp AACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCCCAAGTACTCGAACGTTaGACCCGCCCCGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: NQLLETRTLSRLHAQASAQVLER*TRPDLL
Trigger: CAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTTG...GGCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CAA 90 bp ATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCATCCCGCTCCCCAGCCCCACAAATTaGTCCATGTTTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: IADNGCAASQLCRPPIPLPSPTN*SMFPNT
Trigger: TGTGTTTGGAAACATGGACAAATTTGTGGGGCTGGG...GAGCGGGATGGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GGACTGCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GLQGKAHHSSIALGWVASSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...GGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 5 (lower is better)
Translates to: GHSGAAVELSSQAASYCPPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAGGGGAATACCCGCTCTaGCTGCTTCTCCTCATTGGG +
Preference number: 5 (lower is better)
Translates to: AAVELSSQAASYCPLRARGEYPL*LLLLIG
Trigger: CCCAATGAGGAGAAGCAGCAAGAGCGGGTATTCCCC...TCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000434865.5
CDS-3UTR CAA 90 bp TTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGGAAAGGCACATCACCACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: FSSHLCSHMEGLQGKAHHHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...GTGATGTGCCTTTCCCTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 5 (lower is better)
Translates to: PNQLLETRTLSRLHAQASPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: PNQLLETRTLSRLHAQASAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CAA 90 bp GGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCAGGGGAATACCCGCTCTaGCTGCTTCTCCTCATTGGG +
Preference number: 5 (lower is better)
Translates to: GLRALQCSPSTHACHQYPGEYPL*LLLLIG
Trigger: CCCAATGAGGAGAAGCAGCAAGAGCGGGTATTCCCC...TGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000434865.5
CDS-3UTR CAA 90 bp GTAATGAAGATTGCGGACAATGGCTGTGCAGCCTCCCAGCTCTGTAGGCCGCCCTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: VMKIADNGCAASQLCRPPSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...GGGCGGCCTACAGAGCTGGGAGGCTGCACAGCCATTGTCCGCAATCTTCATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTCACATCACAGCAGCATaGCCCTGGGGTGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: EGKNTSRWSFSSSGVLSTHITAA*PWGGWL
Trigger: AAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTG...AGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCACAAGTACTCGAACGTTaGACCCGCCCCGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSQVLER*TRPDLL
Trigger: CAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTTG...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp CAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATCCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCC +
Preference number: 5 (lower is better)
Translates to: QADSGHFNAVPPLMLAINPCPWI*KCTCNS
Trigger: GGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGG...ATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCGGGGAATACCCGCTCTaGCTGCTTCTCCTCATTGGG +
Preference number: 5 (lower is better)
Translates to: EYSPQPAARDKNTLQAACGEYPL*LLLLIG
Trigger: CCCAATGAGGAGAAGCAGCAAGAGCGGGTATTCCCC...GCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000434524.5
ENST00000434865.5
CDS-3UTR CAA 90 bp CAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTGCTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: QPAARDKNTLQAACSGQCSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...GCACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CAA 90 bp GGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTCCCTCTTCTGGGCCTCTaGCTGCTTCTCCTCATTGGG +
Preference number: 5 (lower is better)
Translates to: GKNTSRWSFSSSGVLSTVPLLGL*LLLLIG
Trigger: CCCAATGAGGAGAAGCAGCAAGAGGCCCAGAAGAGG...GACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449221.5
CDS GCA 90 bp CGCCTCTTCTGGGCCTGGCTGCATCCGATCCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: RLFWAWLHPILCVPD*QAIPMQILLSLSMD
Trigger: ATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGCCCAGAAGAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS-3UTR CAA 90 bp GCAGGGAAAGGCACATCACAGCAGCATTGCCCTGGGGTGGGTGGCTTCCCAGACCAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: AGKGTSQQHCPGVGGFPDQILLS*SMDFEV
Trigger: CACTTCAAAATCCATGGACAAGGAAAGAAGAATCTG...GTCTGGGAAGCCACCCACCCCAGGGCAATGCTGCTGTGATGTGCCTTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGCCAGTCCCAGCCCCACAAATTaGTCCATGTTTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: PNQLLETRTLSRLHAQASPSPTN*SMFPNT
Trigger: TGTGTTTGGAAACATGGACAAATTTGTGGGGCTGGG...ACTGGCCTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
CDS-3UTR CAA 90 bp AAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCTCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 5 (lower is better)
Translates to: KVVAAGGLSRSAFGSVPASLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...GGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS CCA 90 bp ACATGGCACCCGGTTCCACAAGGCACCCTGTTTACTTTGCATATCTaGGGTAAGGCGGATATACTGGGTCATCACCATGGCATTGCCCAT +
Preference number: 5 (lower is better)
Translates to: TWHPVPQGTLFTLHI*GKADILGHHHGIAH
Trigger: ATGGGCAATGCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGGGTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000446780.5
CDS CCA 90 bp ATGCAGCACCCGGTTCCACAAGGCACCCTGTTTACTTTGCATATCTaGGGTAAGGCGGATATACTGGGTCATCACCATGGCATTGCCCAT +
Preference number: 5 (lower is better)
Translates to: MQHPVPQGTLFTLHI*GKADILGHHHGIAH
Trigger: ATGGGCAATGCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGGGTGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CAA 90 bp ATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCATGCTCAGGTCATCACCATGGCATaGCCCATCAGATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: IVPNQLLETRTLSRLHAQVITMA*PIRFHS
Trigger: ACTGTGGAATCTGATGGGCAATGCCATGGTGATGAC...CTGAGCATGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CCTCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCACCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 5 (lower is better)
Translates to: PQVGRGLGQMQNPTNGWSPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...TGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp GGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTCCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 5 (lower is better)
Translates to: GKNTSRWSFSSSGVLSTVPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...GACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp CTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCAGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: LRARTHLDGAFPLLGFSPAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...TGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACTGAGGGCAAGAGCAGCATGTAACCCCTaGTCAAATAAGGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: AAVELSSQAASYCPLRARAACNP*SNKAVE
Trigger: TTCCACTGCCTTATTTGACAAGGGGTTACATGCTGC...TCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS TCA 90 bp CCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATGGCACCC +
Preference number: 5 (lower is better)
Translates to: PSHPHADSSFLVHGF*SAPATPSLSGNMAP
Trigger: GGGTGCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000446780.5
CDS TCA 90 bp CCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGATTTTaGAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PSHPHADSSFLVHGF*SAPATPSLSGNMAW
Trigger: CCAGGCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434865.5
ENST00000440610.5
ENST00000449221.5
CDS-3UTR CAA 90 bp CTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCC +
Preference number: 5 (lower is better)
Translates to: LRARTHLDGAFPLLGFSPPCPWI*KCTCNS
Trigger: GGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGG...TGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp AAAGTGGTGGCAGCAGGAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCCAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: KVVAAGGLSRSAFGSVPAQILLS*SMDFEV
Trigger: CACTTCAAAATCCATGGACAAGGAAAGAAGAATCTG...GGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTCCTGCTGCCACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GGCCACTCAGGGGCGGCAGTGGAGCTGTCATCTCAGGCAGCTTCATATTGTCCACAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: GHSGAAVELSSQAASYCPQILLS*SMDFEV
Trigger: CACTTCAAAATCCATGGACAAGGAAAGAAGAATCTG...TGGACAATATGAAGCTGCCTGAGATGACAGCTCCACTGCCGCCCCTGAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GCAGGCGGACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAACAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: AGGLRALQCSPSTHACHQQILLS*SMDFEV
Trigger: CACTTCAAAATCCATGGACAAGGAAAGAAGAATCTG...TTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGTCCGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGCACCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 5 (lower is better)
Translates to: VANHQEGVVMKIADNGCAPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...TGCACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp CACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: HGSLGYEILFCDFGITTTAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...CGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp GAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: EGSVEALSALFLPFVVEYAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...ATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp ACCTGGAGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: TWSWSVAQLIHGIHDVFQSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...CTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCTCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp GTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTCAGGTAGGCAGAGGGTaGGGTCAAATGCAAAACCCA +
Preference number: 5 (lower is better)
Translates to: VTEYSPQPAARDKNTLQAQVGRG*GQMQNP
Trigger: TGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTG...AGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp ACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCACTTTCCCAGCTCAGGTaGCACACAGAGAGGACAATG +
Preference number: 5 (lower is better)
Translates to: TEYSPQPAARDKNTLQAALSQLR*HTERTM
Trigger: CATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAG...TGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS GCA 90 bp CCATGCAGATTCTTCTTTCCTTGTCCATGGATTTTGAAGTGCACCTaGAACTCCCAGTCTCTCAGGAAACATGGCACCCGGTTCCACAAG +
Preference number: 5 (lower is better)
Translates to: PCRFFFPCPWILKCT*NSQSLRKHGTRFHK
Trigger: CTTGTGGAACCGGGTGCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000446780.5
CDS GCA 90 bp CCATGCAGATTCTTCTTTCCTTGTCCATGGATTTTGAAGTGCACCTaGAACTCCCAGTCTCTCAGGAAACATGGCCTGGTAGGGCTTCGA +
Preference number: 5 (lower is better)
Translates to: PCRFFFPCPWILKCT*NSQSLRKHGLVGLR
Trigger: TCGAAGCCCTACCAGGCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434865.5
ENST00000440610.5
ENST00000449221.5
CDS-3UTR CAA 90 bp ACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCAGTCATCACCATGGCATaGCCCATCAGATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: TEYSPQPAARDKNTLQAAVITMA*PIRFHS
Trigger: ACTGTGGAATCTGATGGGCAATGCCATGGTGATGAC...TGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CCAGTGACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGCCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCC +
Preference number: 5 (lower is better)
Translates to: PVTEYSPQPAARDKNTLQPCPWI*KCTCNS
Trigger: GGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGG...CTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
CDS-3UTR CAA 90 bp ATCCAAATGCCTTTCCCAGCTCAGGTTGCACACAGAGAGGACAATGAATGGAGTCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCA +
Preference number: 5 (lower is better)
Translates to: IQMPFPAQVAHREDNEWSPLCTR*PSHPHA
Trigger: TGCATGGGGATGGCTTGGCAATCTGGTACACAAAGG...ACTCCATTCATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAGGCATTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp ACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTGTCAGTTCAAGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: THLDGAFPLLGFSPLSVQAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...TTGAACTGACAGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp TCAGGTAGGCAGAGGGTTGGGTCAAATGCAAAACCCAACGAATGGATGGTCAGATCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: SGRQRVGSNAKPNEWMVRSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...TCTGACCATCCATTCGTTGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp AAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACACCTCTTCTGGGCCTCTaGCTGCTTCTCCTCATTGGG +
Preference number: 5 (lower is better)
Translates to: KQHGSLGYEILFCDFGITPLLGL*LLLLIG
Trigger: CCCAATGAGGAGAAGCAGCAAGAGGCCCAGAAGAGG...TGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377079.8
CDS CCA 90 bp AAGGCACCCTGTTTACTTTGCATATCTGGGGTAAGGCGGATATACTaGGTCATCACCATGGCATTGCCCATCAGATTCCACAGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KAPCLLCISGVRRIY*VITMALPIRFHSEE
Trigger: TTCCTCACTGTGGAATCTGATGGGCAATGCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp TCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAACAAGTACTCGAACGTTaGACCCGCCCCGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SMQSLHSCLPSISIIIVKQVLER*TRPDLL
Trigger: CAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTTG...TTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCGTCATCACCATGGCATaGCCCATCAGATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: CGFKTEVEGPSESNNTAAVITMA*PIRFHS
Trigger: ACTGTGGAATCTGATGGGCAATGCCATGGTGATGAC...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: VKQHGSLGYEILFCDFGIAASDP*CTRLPS
Trigger: GCTTGGCAATCTGGTACACAAAGGATCGGATGCAGC...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp ACAGAATATAGTCCCCAACCAGCTGCTAGAGACAAGAACACTCTCCAGGCTGCACCCAGCCCCACAAATTaGTCCATGTTTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: TEYSPQPAARDKNTLQAAPSPTN*SMFPNT
Trigger: TGTGTTTGGAAACATGGACAAATTTGTGGGGCTGGG...TGCAGCCTGGAGAGTGTTCTTGTCTCTAGCAGCTGGTTGGGGACTATATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
CDS-3UTR CAA 90 bp GAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGGTTCTCTCCACTTCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 5 (lower is better)
Translates to: EGKNTSRWSFSSSGVLSTSLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...AGTGGAGAGAACCCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp AGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCCTCTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: RKVRQGRSFHPGFQRKLLSGSFI*STEGKN
Trigger: GTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGA...GAGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCCAGGTAGGCAGAGGGTaGGGTCAAATGCAAAACCCA +
Preference number: 5 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSQVGRG*GQMQNP
Trigger: TGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTG...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CAA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGGATGATGAGGGTCTGTaGCTCTCAGACTTGGAACAT +
Preference number: 5 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQDDEGL*LSDLEH
Trigger: ATGTTCCAAGTCTGAGAGCAACAGACCCTCATCATC...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CAA 90 bp GACGTAGCGAATCACCAGGAAGGTGTCGTAATGAAGATTGCGGACAATGGCTGTGATGATGAGGGTCTGTaGCTCTCAGACTTGGAACAT +
Preference number: 5 (lower is better)
Translates to: DVANHQEGVVMKIADNGCDDEGL*LSDLEH
Trigger: ATGTTCCAAGTCTGAGAGCAACAGACCCTCATCATC...ACAGCCATTGTCCGCAATCTTCATTACGACACCTTCCTGGTGATTCGCTACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS GCA 90 bp GGAATACTGCATTCACTTCTTGTCGCCATACCTCAAGGAAGACAATaGAGCACCCGGTTCCACAAGGCACCCTGTTTACTTTGCATATCT +
Preference number: 5 (lower is better)
Translates to: GILHSLLVAIPQGRQ*STRFHKAPCLLCIS
Trigger: AGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGGGTGCTGCATTGTCTTCCTTGAGGTATGGCGACAAGAAGTGAATGCAGTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CAA 90 bp AACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCAGTCATCACCATGGCATaGCCCATCAGATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: NTAAWAMKFCSVILASQPVITMA*PIRFHS
Trigger: ACTGTGGAATCTGATGGGCAATGCCATGGTGATGAC...TGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp GGGGTAGGTGTCTACAAATACTCCCAGCCCCACAAATTTGTCCATGTTTCCAAACCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCC +
Preference number: 5 (lower is better)
Translates to: GVGVYKYSQPHKFVHVSKPCPWI*KCTCNS
Trigger: GGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGG...TTTGGAAACATGGACAAATTTGTGGGGCTGGGAGTATTTGTAGACACCTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CAA 90 bp ACTCCGGGCACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCCAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: TPGTSMQSLHSCLPSISIQILLS*SMDFEV
Trigger: CACTTCAAAATCCATGGACAAGGAAAGAAGAATCTG...GATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGTGCCCGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp GTCAAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCCCCAGCCCCACAAATTaGTCCATGTTTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: VKQHGSLGYEILFCDFGIPSPTN*SMFPNT
Trigger: TGTGTTTGGAAACATGGACAAATTTGTGGGGCTGGG...GATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp TGTGGATTCAAAACTGAAGTAGAAGGGCCTTCTGAGTCAAACAACACGGCAGCCTCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 5 (lower is better)
Translates to: CGFKTEVEGPSESNNTAASLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...GGCTGCCGTGTTGTTTGACTCAGAAGGCCCTTCTACTTCAGTTTTGAATCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp GGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATGATTCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 5 (lower is better)
Translates to: GSVEALSALFLPFVVEYDSLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...ATCATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS-3UTR CAA 90 bp TTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTCACACCTCTGCCAGGTAGGCAGAGGGTaGGGTCAAATGCAAAACCCA +
Preference number: 5 (lower is better)
Translates to: FCSVILASQPRKFSSHLCQVGRG*GQMQNP
Trigger: TGGGTTTTGCATTTGACCCAACCCTCTGCCTACCTG...GCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp TCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCAAACTTTCCCAGCTCAGGTaGCACACAGAGAGGACAATG +
Preference number: 5 (lower is better)
Translates to: SMQSLHSCLPSISIIIVKLSQLR*HTERTM
Trigger: CATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAG...TTTGACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CAA 90 bp CTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGCTTCCTTACACTTTCAGCCTGTTGCTCTCAGACTaGGAACATGAGAACAGCAAC +
Preference number: 5 (lower is better)
Translates to: LGNIQAQGVRRKLPYTFSLLLSD*EHENSN
Trigger: GTTGCTGTTCTCATGTTCCAAGTCTGAGAGCAACAG...GCTGAAAGTGTAAGGAAGCTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CAA 90 bp CATCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCTCAGGAAACATGGACTaGTACAAAATCACAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HHNHVNSLHTSAPTWKDCSGNMD*YKITVQ
Trigger: CTGCACTGTGATTTTGTACAAGTCCATGTTTCCTGA...GCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CAA 90 bp TCACAACCACGTAAATTCTCTTCACACCTCTGCTCCCACATGGAAGGACTGCAGCAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: SQPRKFSSHLCSHMEGLQQILLS*SMDFEV
Trigger: CACTTCAAAATCCATGGACAAGGAAAGAAGAATCTG...CTGCAGTCCTTCCATGTGGGAGCAGAGGTGTGAAGAGAATTTACGTGGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp CAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTTCCCAGCCCCACAAATTaGTCCATGTTTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: QMQNPTNGWSESLWCYQFPSPTN*SMFPNT
Trigger: TGTGTTTGGAAACATGGACAAATTTGTGGGGCTGGG...AAACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp GTCAAATGCAAAACCCAACGAATGGATGGTCAGAAAGCCTGTGGTGTTACCAGTTCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 5 (lower is better)
Translates to: VKCKTQRMDGQKACGVTSSLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...ACTGGTAACACCACAGGCTTTCTGACCATCCATTCGTTGGGTTTTGCATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp GAGGGCTCAGTAGAAGCGCTTTCGGCTCTGTTCCTGCCATTTGTTGTAGAGTATTTCTGTTCTGTGATTTaGGCATCACAACCACGTAAA +
Preference number: 5 (lower is better)
Translates to: EGSVEALSALFLPFVVEYFCSVI*ASQPRK
Trigger: TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA...ATACTCTACAACAAATGGCAGGAACAGAGCCGAAAGCGCTTCTACTGAGCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp AGCTGGTCAGTTGCACAGCTAATCCATGGCATCCATGATGTCTTCCAGGCTTCTTCTTCCAGGCTTCTCTaGATTTTTACACCAACCTTT +
Preference number: 5 (lower is better)
Translates to: SWSVAQLIHGIHDVFQASSSRLL*IFTPTF
Trigger: AAAGGTTGGTGTAAAAATCAAGAGAAGCCTGGAAGA...AGAAGCCTGGAAGACATCATGGATGCCATGGATTAGCTGTGCAACTGACCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp ACTTCAATGCAGTCCCTCCACTCATGCTTGCCATCAATATCCATCATTATCGTCCTGTTGCTCTCAGACTaGGAACATGAGAACAGCAAC +
Preference number: 5 (lower is better)
Translates to: TSMQSLHSCLPSISIIIVLLLSD*EHENSN
Trigger: GTTGCTGTTCTCATGTTCCAAGTCTGAGAGCAACAG...GACGATAATGATGGATATTGATGGCAAGCATGAGTGGAGGGACTGCATTGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS-3UTR CAA 90 bp ATATTGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCTTCTGGGTTCTGTTCTGTGATTTaGGCATCACAACCACGTAAA +
Preference number: 5 (lower is better)
Translates to: ILSTEGKNTSRWSFSSSGFCSVI*ASQPRK
Trigger: TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA...CCCAGAAGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp AGGAAGGTAAGGCAGGGAAGAAGTTTCCATCCTGGTTTCCAAAGAAAGCTCCTCTCTTCCAGGCTTCTCTaGATTTTTACACCAACCTTT +
Preference number: 5 (lower is better)
Translates to: RKVRQGRSFHPGFQRKLLSSRLL*IFTPTF
Trigger: AAAGGTTGGTGTAAAAATCAAGAGAAGCCTGGAAGA...GAGGAGCTTTCTTTGGAAACCAGGATGGAAACTTCTTCCCTGCCTTACCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp AGTGGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCATCCCTCCACTCATGCTaGCCATCAATATCCATCATT +
Preference number: 5 (lower is better)
Translates to: SGIPKIVTTKHAAKQALASLHSC*PSISII
Trigger: AATGATGGATATTGATGGCAAGCATGAGTGGAGGGA...TGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CAA 90 bp GCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTCACTTTCCCAGCTCAGGTaGCACACAGAGAGGACAATG +
Preference number: 5 (lower is better)
Translates to: AMKFCSVILASQPRKFSSLSQLR*HTERTM
Trigger: CATTGTCCTCTCTGTGTGCAACCTGAGCTGGGAAAG...TGAAGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp AAAAGCCAAATTTCTTCTCTGGGCAATATCCAAGCCCAAGGTGTAAGAAGAAAGGCAGCATGTAACCCCTaGTCAAATAAGGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: KSQISSLGNIQAQGVRRKAACNP*SNKAVE
Trigger: TTCCACTGCCTTATTTGACAAGGGGTTACATGCTGC...CTTTCTTCTTACACCTTGGGCTTGGATATTGCCCAGAGAAGAAATTTGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CAA 90 bp ATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAAACCCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCC +
Preference number: 5 (lower is better)
Translates to: MVRKPVVLPVFNSLWIQNPCPWI*KCTCNS
Trigger: GGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGG...GTTTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS-3UTR CAA 90 bp AAACAACACGGCAGCCTGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACATTCTGTTCTGTGATTTaGGCATCACAACCACGTAAA +
Preference number: 5 (lower is better)
Translates to: KQHGSLGYEILFCDFGITFCSVI*ASQPRK
Trigger: TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA...TGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCAGGCTGCCGTGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS GCA 90 bp ATGGCTAAAGTGAGAAAGACATTAGAATCAATGAGGAGCATGAAATaGAAAACCCCTCAAGCCCACATCAGCAATCAACAGACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: MAKVRKTLESMRSMK*KTPQAHISNQQTWK
Trigger: TTTCCAAGTCTGTTGATTGCTGATGTGGGCTTGAGGGGTTTTGCATTTCATGCTCCTCATTGATTCTAATGTCTTTCTCACTTTAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480869.1
CDS-3UTR CAA 90 bp GGGATTCCAAAAATCGTAACTACAAAACATGCAGCTAAGCAGGCTCTAGCAAGTTCTTCCAGGCTTCTCTaGATTTTTACACCAACCTTT +
Preference number: 5 (lower is better)
Translates to: GIPKIVTTKHAAKQALASSSRLL*IFTPTF
Trigger: AAAGGTTGGTGTAAAAATCAAGAGAAGCCTGGAAGA...ACTTGCTAGAGCCTGCTTAGCTGCATGTTTTGTAGTTACGATTTTTGGAATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264963.9
ENST00000434524.5
CDS-3UTR CAA 90 bp TGGGCTATGAAATTCTGTTCTGTGATTTTGGCATCACAACCACGTAAATTCTCTTTCTGTTCTGTGATTTaGGCATCACAACCACGTAAA +
Preference number: 5 (lower is better)
Translates to: WAMKFCSVILASQPRKFSFCSVI*ASQPRK
Trigger: TTTACGTGGTTGTGATGCCAAAATCACAGAACAGAA...AGAGAATTTACGTGGTTGTGATGCCAAAATCACAGAACAGAATTTCATAGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS-3UTR CAA 90 bp ATGGTCAGAAAGCCTGTGGTGTTACCAGTTTTTAATTCTTTGTGGATTCAAAACCAGATTCTTCTTTCCTaGTCCATGGATTTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: MVRKPVVLPVFNSLWIQNQILLS*SMDFEV
Trigger: CACTTCAAAATCCATGGACAAGGAAAGAAGAATCTG...GTTTTGAATCCACAAAGAATTAAAAACTGGTAACACCACAGGCTTTCTGACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
CDS GCA 72 bp CTGGACCCATCCCGAGCCGACAAACATCGCCGCCACTaGTGCCACGACCCAAGGGGTCCCAGAGTCGCCGCC +
Preference number: 6 (lower is better)
Translates to: LDPSRADKHRRH*CHDPRGPRVAA
Trigger: GGCGGCGACTCTGGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTTGTCGGCTCGGGATGGGTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS GCA 72 bp GACCCATCCCGAGCCGACAAACATCGCCGCCACTGCTaGCACGACCCAAGGGGTCCCAGAGTCGCCGCCATC +
Preference number: 6 (lower is better)
Translates to: DPSRADKHRRHC*HDPRGPRVAAI
Trigger: GATGGCGGCGACTCTGGGACCCCTTGGGTCGTGGCAGCAGTGGCGGCGATGTTTGTCGGCTCGGGATGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS TCA 72 bp GACAGCGAGTGCTCCCGTTTCAAGTACTCGAACGTTTaGCCCGCCCCGACTTGCTGTGGCCCCTGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: DSECSRFKYSNV*PAPTCCGPCPD
Trigger: GTCTGGGCAGGGGCCACAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTTGAAACGGGAGCACTCGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS CAA 72 bp CGACAGCGAGTGCTCCCGTTTCAAGTACTCGAACGTTaGACCCGCCCCGACTTGCTGTGGCCCCTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: RQRVLPFQVLER*TRPDLLWPLPR
Trigger: TCTGGGCAGGGGCCACAGCAAGTCGGGGCGGGTCAAACGTTCGAGTACTTGAAACGGGAGCACTCGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000434865.5
ENST00000440610.5
ENST00000446780.5
ENST00000449221.5
CDS TCA 72 bp GGTCATCACCATGGCATTGCCCATCAGATTCCACAGTaGGGAACTGCCTGTGCCCACACCCTGGTAGGGCTT +
Preference number: 6 (lower is better)
Translates to: GHHHGIAHQIPQ*GTACAHTLVGL
Trigger: AAGCCCTACCAGGGTGTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATGGGCAATGCCATGGTGATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS CAA 90 bp TGCATATCTGGGGTAAGGCGGATATACTGGGTCATCACCATGGCATaGCCCATCAGATTCCACAGTGAGGAACTGCCTGTGCCCACACCC +
Preference number: 6 (lower is better)
Translates to: CISGVRRIYWVITMA*PIRFHSEELPVPTP
Trigger: GGGTGTGGGCACAGGCAGTTCCTCACTGTGGAATCTGATGGGCAATGCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS CAA 90 bp ACCATTTCCCGCGGGCCCCTGTGCTCACTCTCAGGCAGCTTCATATaGTCCACTGAGGGCAAGAACACATCTCGATGGAGCTTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: TISRGPLCSLSGSFI*STEGKNTSRWSFSS
Trigger: AGAGGAAAAGCTCCATCGAGATGTGTTCTTGCCCTCAGTGGACAATATGAAGCTGCCTGAGAGTGAGCACAGGGGCCCGCGGGAAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474494.1
CDS CAA 72 bp GGGGTAAGGCGGATATACTGGGTCATCACCATGGCATaGCCCATCAGATTCCACAGTGAGGAACTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: GVRRIYWVITMA*PIRFHSEELPV
Trigger: CACAGGCAGTTCCTCACTGTGGAATCTGATGGGCAATGCCATGGTGATGACCCAGTATATCCGCCTTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS CAA 72 bp GATGTAGGGGAATACCCGCTGGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGCCATCCCCATGCAGAT +
Preference number: 6 (lower is better)
Translates to: DVGEYPLAASDP*CTRLPSHPHAD
Trigger: ATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGCGGGTATTCCCCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440610.5
CDS CAA 72 bp ATATCGCCTCTTCTGGGCCTGGCTGCATCCGATCCTTaGTGTACCAGATTGCCAAGCCATCCCCATGCAGAT +
Preference number: 6 (lower is better)
Translates to: ISPLLGLAASDP*CTRLPSHPHAD
Trigger: ATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGCCCAGAAGAGGCGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS CAA 90 bp TCGCCTCTTCTGGGCCTGGCTGCATCCGATCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGA +
Preference number: 6 (lower is better)
Translates to: SPLLGLAASDPLCTR*PSHPHADSSFLVHG
Trigger: TCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGCCCAGAAGAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS GCA 72 bp ACCCGCTGGCTGCATCCGATCCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAGATTCTTCTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: TRWLHPILCVPD*QAIPMQILLSL
Trigger: CAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440610.5
CDS GCA 72 bp TGGGCCTGGCTGCATCCGATCCTTTGTGTACCAGATTaGCAAGCCATCCCCATGCAGATTCTTCTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: WAWLHPILCVPD*QAIPMQILLSL
Trigger: CAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS CCA 72 bp CCGGTTCCACAAGGCACCCTGTTTACTTTGCATATCTaGGGTAAGGCGGATATACTGGGTCATCACCATGGC +
Preference number: 6 (lower is better)
Translates to: PVPQGTLFTLHI*GKADILGHHHG
Trigger: GCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS CAA 72 bp CTGGGCCTGGCTGCATCCGATCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: LGLAASDPLCTR*PSHPHADSSFL
Trigger: AAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446780.5
CDS CAA 90 bp TCTCAGGAAACATGGCACCCGGTTCCACAAGGCACCCTGTTTACTTaGCATATCTGGGGTAAGGCGGATATACTGGGTCATCACCATGGC +
Preference number: 6 (lower is better)
Translates to: SQETWHPVPQGTLFT*HIWGKADILGHHHG
Trigger: GCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGGGTGCCATGTTTCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000446780.5
CDS CAA 90 bp GTAGGGGAATACCCGCTGGCTGCATCCGATCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGA +
Preference number: 6 (lower is better)
Translates to: VGEYPLAASDPLCTR*PSHPHADSSFLVHG
Trigger: TCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGCGGGTATTCCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440610.5
CDS CAA 90 bp AGGAAGACAATGCAGCACCCGGTTCCACAAGGCACCCTGTTTACTTaGCATATCTGGGGTAAGGCGGATATACTGGGTCATCACCATGGC +
Preference number: 6 (lower is better)
Translates to: RKTMQHPVPQGTLFT*HIWGKADILGHHHG
Trigger: GCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGGGTGCTGCATTGTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS CAA 90 bp GCCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATGGCACC +
Preference number: 6 (lower is better)
Translates to: AKPSPCRFFFPCPWI*KCTCNSQSLRKHGT
Trigger: GGTGCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000446780.5
CDS CAA 90 bp GCCAAGCCATCCCCATGCAGATTCTTCTTTCCTTGTCCATGGATTTaGAAGTGCACCTGCAACTCCCAGTCTCTCAGGAAACATGGCCTG +
Preference number: 6 (lower is better)
Translates to: AKPSPCRFFFPCPWI*KCTCNSQSLRKHGL
Trigger: CAGGCCATGTTTCCTGAGAGACTGGGAGTTGCAGGTGCACTTCAAAATCCATGGACAAGGAAAGAAGAATCTGCATGGGGATGGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434865.5
ENST00000440610.5
ENST00000449221.5
CDS CAA 72 bp ACATGGCACCCGGTTCCACAAGGCACCCTGTTTACTTaGCATATCTGGGGTAAGGCGGATATACTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: TWHPVPQGTLFT*HIWGKADILGH
Trigger: ATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGGGTGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000446780.5
CDS CAA 72 bp TACCCGCTGGCTGCATCCGATCCTTTGTGTACCAGATaGCCAAGCCATCCCCATGCAGATTCTTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: YPLAASDPLCTR*PSHPHADSSFL
Trigger: AAGGAAAGAAGAATCTGCATGGGGATGGCTTGGCAATCTGGTACACAAAGGATCGGATGCAGCCAGCGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440610.5
CDS CAA 72 bp ATGCAGCACCCGGTTCCACAAGGCACCCTGTTTACTTaGCATATCTGGGGTAAGGCGGATATACTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: MQHPVPQGTLFT*HIWGKADILGH
Trigger: ATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACAGGGTGCCTTGTGGAACCGGGTGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS CAA 72 bp ACAGTGCAGCCACACCAGGAATACTGCATTCACTTCTaGTCGCCATACCTCAAGGAAGACAATGCAGCACCC +
Preference number: 6 (lower is better)
Translates to: TVQPHQEYCIHF*SPYLKEDNAAP
Trigger: GGGTGCTGCATTGTCTTCCTTGAGGTATGGCGACAAGAAGTGAATGCAGTATTCCTGGTGTGGCTGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS GCA 72 bp CATTCACTTCTTGTCGCCATACCTCAAGGAAGACAATaGAGCACCCGGTTCCACAAGGCACCCTGTTTACTT +
Preference number: 6 (lower is better)
Translates to: HSLLVAIPQGRQ*STRFHKAPCLL
Trigger: AAGTAAACAGGGTGCCTTGTGGAACCGGGTGCTGCATTGTCTTCCTTGAGGTATGGCGACAAGAAGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434524.5
CDS CCA 72 bp TGTTTACTTTGCATATCTGGGGTAAGGCGGATATACTaGGTCATCACCATGGCATTGCCCATCAGATTCCAC +
Preference number: 6 (lower is better)
Translates to: CLLCISGVRRIY*VITMALPIRFH
Trigger: GTGGAATCTGATGGGCAATGCCATGGTGATGACCCAGTATATCCGCCTTACCCCAGATATGCAAAGTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264963.9
ENST00000377079.8
ENST00000434524.5
ENST00000446780.5
CDS GCA 72 bp GTGAGAAAGACATTAGAATCAATGAGGAGCATGAAATaGAAAACCCCTCAAGCCCACATCAGCAATCAACAG +
Preference number: 6 (lower is better)
Translates to: VRKTLESMRSMK*KTPQAHISNQQ
Trigger: CTGTTGATTGCTGATGTGGGCTTGAGGGGTTTTGCATTTCATGCTCCTCATTGATTCTAATGTCTTTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480869.1