Pregenerated sensors for LINC02894 (Homo sapiens)
Ensembl gene IDs: ENSG00000261437Ensembl transcript IDs: ENST00000562760.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGGTTTTTCCAGGTCCCTCCCTGCCTCGTTCCGCGCCCAGTCCCTaGCCCCGCGACGCCCGAGGGCCTGGACGGGTAGCTCGGAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: VVFPGPSLPRSAPSP*PRDARGPGRVARSY Trigger: GTAACTCCGAGCTACCCGTCCAGGCCCTCGGGCGTCGCGGGGGCAGGGACTGGGCGCGGAACGAGGCAGGGAGGGACCTGGAAAAACCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 90 bp | AACTCAAGCAGTGGACGAGGGAGGTCCCGAGCGCCGTCGCAGCGCTaGGAGTGTGGGACCCTGGCCTTCGCCCGCTCTCAGGGGACGAGA | + |
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Preference number: 5 (lower is better) Translates to: NSSSGRGRSRAPSQR*ECGTLAFARSQGTR Trigger: TCTCGTCCCCTGAGAGCGGGCGAAGGCCAGGGTCCCACACTCGCAGCGCTGCGACGGCGCTCGGGACCTCCCTCGTCCACTGCTTGAGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 90 bp | TCGCCCACTGCAATGCAATCTGGGTGGTTTTTCCAGGTCCCTCCCTaGCTCGTTCCGCGCCCAGTCCCTGCCCCCGCGACGCCCGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SPTAMQSGWFFQVPP*LVPRPVPAPATPEG Trigger: GCCCTCGGGCGTCGCGGGGGCAGGGACTGGGCGCGGAACGAGGCAGGGAGGGACCTGGAAAAACCACCCAGATTGCATTGCAGTGGGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 90 bp | GGGGAACCGGCTCCTCCAGGCGGCCTCGCCCACTGCAATGCAATCTaGGTGGTTTTTCCAGGTCCCTCCCTGCCTCGTTCCGCGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GEPAPPGGLAHCNAI*VVFPGPSLPRSAPS Trigger: ACTGGGCGCGGAACGAGGCAGGGAGGGACCTGGAAAAACCACCCAGATTGCATTGCAGTGGGCGAGGCCGCCTGGAGGAGCCGGTTCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 90 bp | AACCGGCTCCTCCAGGCGGCCTCGCCCACTGCAATGCAATCTGGGTaGTTTTTCCAGGTCCCTCCCTGCCTCGTTCCGCGCCCAGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: NRLLQAASPTAMQSG*FFQVPPCLVPRPVP Trigger: AGGGACTGGGCGCGGAACGAGGCAGGGAGGGACCTGGAAAAACCACCCAGATTGCATTGCAGTGGGCGAGGCCGCCTGGAGGAGCCGGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 90 bp | TGGTTAGGGGGAACCGGCTCCTCCAGGCGGCCTCGCCCACTGCAATaGAATCTGGGTGGTTTTTCCAGGTCCCTCCCTGCCTCGTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: WLGGTGSSRRPRPLQ*NLGGFSRSLPASFR Trigger: GCGGAACGAGGCAGGGAGGGACCTGGAAAAACCACCCAGATTGCATTGCAGTGGGCGAGGCCGCCTGGAGGAGCCGGTTCCCCCTAACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 90 bp | CTGAAGTTCAGGACAGGGAAGCACCCACCTCTGGAACTCAAGCAGTaGACGAGGGAGGTCCCGAGCGCCGTCGCAGCGCTGCGAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LKFRTGKHPPLELKQ*TREVPSAVAALRVW Trigger: CCACACTCGCAGCGCTGCGACGGCGCTCGGGACCTCCCTCGTCCACTGCTTGAGTTCCAGAGGTGGGTGCTTCCCTGTCCTGAACTTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS TCA 90 bp | GGGGAGGAGCGAGGCTACTGCAGTAAGCCAGCCGGAACCCATTTATaGCTCCGCACTCTGAAGTTCAGGACAGGGAAGCACCCACCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GEERGYCSKPAGTHL*LRTLKFRTGKHPPL Trigger: CAGAGGTGGGTGCTTCCCTGTCCTGAACTTCAGAGTGCGGAGTCATAAATGGGTTCCGGCTGGCTTACTGCAGTAGCCTCGCTCCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 90 bp | CGGGTTTCCTCAAGTGTTCCAACCACTTTTTCAGCAAGAGTCACCTaGTTGGCGACGAGCCTCCGGACCGCCCCGCGCTATCTGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: RVSSSVPTTFSARVT*LATSLRTAPRYLFH Trigger: GTGGAACAGATAGCGCGGGGCGGTCCGGAGGCTCGTCGCCAAGCAGGTGACTCTTGCTGAAAAAGTGGTTGGAACACTTGAGGAAACCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 90 bp | TTTCCTCAAGTGTTCCAACCACTTTTTCAGCAAGAGTCACCTGCTTaGCGACGAGCCTCCGGACCGCCCCGCGCTATCTGTTCCACCCGG | + |
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Preference number: 5 (lower is better) Translates to: FPQVFQPLFQQESPA*RRASGPPRAICSTR Trigger: CCGGGTGGAACAGATAGCGCGGGGCGGTCCGGAGGCTCGTCGCCAAGCAGGTGACTCTTGCTGAAAAAGTGGTTGGAACACTTGAGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS TCA 90 bp | GCTACTGCAGTAAGCCAGCCGGAACCCATTTATGACTCCGCACTCTaGAGTTCAGGACAGGGAAGCACCCACCTCTGGAACTCAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: ATAVSQPEPIYDSAL*SSGQGSTHLWNSSS Trigger: ACTGCTTGAGTTCCAGAGGTGGGTGCTTCCCTGTCCTGAACTTCAGAGTGCGGAGTCATAAATGGGTTCCGGCTGGCTTACTGCAGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 72 bp | CCAGGTCCCTCCCTGCCTCGTTCCGCGCCCAGTCCCTaGCCCCGCGACGCCCGAGGGCCTGGACGGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGPSLPRSAPSP*PRDARGPGRVA Trigger: AGCTACCCGTCCAGGCCCTCGGGCGTCGCGGGGGCAGGGACTGGGCGCGGAACGAGGCAGGGAGGGACCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 72 bp | CCCGAGCGCCGTCGCAGCGCTGCGAGTGTGGGACCCTaGCCTTCGCCCGCTCTCAGGGGACGAGAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PERRRSAASVGP*PSPALRGRELP Trigger: TGGCAGCTCTCGTCCCCTGAGAGCGGGCGAAGGCCAGGGTCCCACACTCGCAGCGCTGCGACGGCGCTCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 72 bp | AGGGAGGTCCCGAGCGCCGTCGCAGCGCTGCGAGTGTaGGACCCTGGCCTTCGCCCGCTCTCAGGGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: REVPSAVAALRV*DPGLRPLSGDE Trigger: CTCGTCCCCTGAGAGCGGGCGAAGGCCAGGGTCCCACACTCGCAGCGCTGCGACGGCGCTCGGGACCTCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 72 bp | AGTGGACGAGGGAGGTCCCGAGCGCCGTCGCAGCGCTaGGAGTGTGGGACCCTGGCCTTCGCCCGCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SGRGRSRAPSQR*ECGTLAFARSQ Trigger: CTGAGAGCGGGCGAAGGCCAGGGTCCCACACTCGCAGCGCTGCGACGGCGCTCGGGACCTCCCTCGTCCACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 72 bp | GCAATGCAATCTGGGTGGTTTTTCCAGGTCCCTCCCTaGCTCGTTCCGCGCCCAGTCCCTGCCCCCGCGACG | + |
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Preference number: 6 (lower is better) Translates to: AMQSGWFFQVPP*LVPRPVPAPAT Trigger: CGTCGCGGGGGCAGGGACTGGGCGCGGAACGAGGCAGGGAGGGACCTGGAAAAACCACCCAGATTGCATTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 72 bp | GGAACCGGCTCCTCCAGGCGGCCTCGCCCACTGCAATaGAATCTGGGTGGTTTTTCCAGGTCCCTCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GTGSSRRPRPLQ*NLGGFSRSLPA Trigger: GGCAGGGAGGGACCTGGAAAAACCACCCAGATTGCATTGCAGTGGGCGAGGCCGCCTGGAGGAGCCGGTTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 72 bp | GCTCCTCCAGGCGGCCTCGCCCACTGCAATGCAATCTaGGTGGTTTTTCCAGGTCCCTCCCTGCCTCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: APPGGLAHCNAI*VVFPGPSLPRS Trigger: GGAACGAGGCAGGGAGGGACCTGGAAAAACCACCCAGATTGCATTGCAGTGGGCGAGGCCGCCTGGAGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CCA 72 bp | GTGTTCCAACCACTTTTTCAGCAAGAGTCACCTGCTTaGCGACGAGCCTCCGGACCGCCCCGCGCTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: VFQPLFQQESPA*RRASGPPRAIC Trigger: ACAGATAGCGCGGGGCGGTCCGGAGGCTCGTCGCCAAGCAGGTGACTCTTGCTGAAAAAGTGGTTGGAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CAA 72 bp | AGTGTTCCAACCACTTTTTCAGCAAGAGTCACCTGCTaGGCGACGAGCCTCCGGACCGCCCCGCGCTATCTG | + |
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Preference number: 6 (lower is better) Translates to: SVPTTFSARVTC*ATSLRTAPRYL Trigger: CAGATAGCGCGGGGCGGTCCGGAGGCTCGTCGCCAAGCAGGTGACTCTTGCTGAAAAAGTGGTTGGAACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CAA 90 bp | GTTTCCTCAAGTGTTCCAACCACTTTTTCAGCAAGAGTCACCTGCTaGGCGACGAGCCTCCGGACCGCCCCGCGCTATCTGTTCCACCCG | + |
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Preference number: 6 (lower is better) Translates to: VSSSVPTTFSARVTC*ATSLRTAPRYLFHP Trigger: CGGGTGGAACAGATAGCGCGGGGCGGTCCGGAGGCTCGTCGCCAAGCAGGTGACTCTTGCTGAAAAAGTGGTTGGAACACTTGAGGAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS GCA 72 bp | TCAAGTGTTCCAACCACTTTTTCAGCAAGAGTCACCTaGTTGGCGACGAGCCTCCGGACCGCCCCGCGCTAT | + |
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Preference number: 6 (lower is better) Translates to: SSVPTTFSARVT*LATSLRTAPRY Trigger: ATAGCGCGGGGCGGTCCGGAGGCTCGTCGCCAAGCAGGTGACTCTTGCTGAAAAAGTGGTTGGAACACTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS TCA 72 bp | GTAAGCCAGCCGGAACCCATTTATGACTCCGCACTCTaGAGTTCAGGACAGGGAAGCACCCACCTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VSQPEPIYDSAL*SSGQGSTHLWN Trigger: GTTCCAGAGGTGGGTGCTTCCCTGTCCTGAACTTCAGAGTGCGGAGTCATAAATGGGTTCCGGCTGGCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CAA 72 bp | ATATGTCAGGCTCTGTTCCAAGCCCTGGGAATACATTaGAGAACAACAACAACAACAACAACAAAATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ICQALFQALGIH*RTTTTTTTKSS Trigger: TGAGGATTTTGTTGTTGTTGTTGTTGTTGTTCTCAAATGTATTCCCAGGGCTTGGAACAGAGCCTGACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CAA 90 bp | CCCCTAAATACTTCAGTAGATACTTCCACCAACAAAGACACTCTCTaGCCCAACCACAGTAATATTACAACAAATGGGAAATTAACATGG | + |
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Preference number: 6 (lower is better) Translates to: PLNTSVDTSTNKDTL*PNHSNITTNGKLTW Trigger: CCATGTTAATTTCCCATTTGTTGTAATATTACTGTGGTTGGGCAAGAGAGTGTCTTTGTTGGTGGAAGTATCTACTGAAGTATTTAGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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| CDS CAA 72 bp | ACTTCAGTAGATACTTCCACCAACAAAGACACTCTCTaGCCCAACCACAGTAATATTACAACAAATGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: TSVDTSTNKDTL*PNHSNITTNGK Trigger: TTTCCCATTTGTTGTAATATTACTGTGGTTGGGCAAGAGAGTGTCTTTGTTGGTGGAAGTATCTACTGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562760.1 |
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