Pregenerated sensors for LINC02876 (Homo sapiens)

Ensembl gene IDs: ENSG00000227011

Ensembl transcript IDs: ENST00000623702.1, ENST00000649605.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CAGCTGATTCACAGGAGATTCATGATTAGAGTTGGCCAGAGGAGGTaGAGGCATGGACTCTGTTGTGCCTCTTCCATCAGCAAATGCTAC	+
Preference number: 5 (lower is better) Translates to: QLIHRRFMIRVGQRR*RHGLCCASSISKCY Trigger: GTAGCATTTGCTGATGGAAGAGGCACAACAGAGTCCATGCCTTCACCTCCTCTGGCCAACTCTAATCATGAATCTCCTGTGAATCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1
CDS TCA 90 bp	CCTTATCCAACCTCAAACTTGCTGGTGCTCATGTCTCTGTGGTTCTaGAGTAGAACTAGCCTTCAATCTCAGTGTCATGCCTTTATTCAT	+
Preference number: 5 (lower is better) Translates to: PYPTSNLLVLMSLWF*SRTSLQSQCHAFIH Trigger: ATGAATAAAGGCATGACACTGAGATTGAAGGCTAGTTCTACTTCAGAACCACAGAGACATGAGCACCAGCAAGTTTGAGGTTGGATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1
CDS TCA 90 bp	GAGAAGCTTCTGTTCTACCATTGCCAAGGAAAATTCCAGTTAGTATaGATGAGGGCCCCAATCTCATATTCTGCATGTTTCCCAGCTGAT	+
Preference number: 5 (lower is better) Translates to: EKLLFYHCQGKFQLV*MRAPISYSACFPAD Trigger: ATCAGCTGGGAAACATGCAGAATATGAGATTGGGGCCCTCATTCATACTAACTGGAATTTTCCTTGGCAATGGTAGAACAGAAGCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1
CDS TCA 72 bp	ACCTCAAACTTGCTGGTGCTCATGTCTCTGTGGTTCTaGAGTAGAACTAGCCTTCAATCTCAGTGTCATGCC	+
Preference number: 6 (lower is better) Translates to: TSNLLVLMSLWF*SRTSLQSQCHA Trigger: GGCATGACACTGAGATTGAAGGCTAGTTCTACTTCAGAACCACAGAGACATGAGCACCAGCAAGTTTGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1
CDS GCA 72 bp	GTTCTGAAGATCCTTATCCAACCTCAAACTTGCTGGTaGTCATGTCTCTGTGGTTCTGAAGTAGAACTAGCC	+
Preference number: 6 (lower is better) Translates to: VLKILIQPQTCW*SCLCGSEVELA Trigger: GGCTAGTTCTACTTCAGAACCACAGAGACATGAGCACCAGCAAGTTTGAGGTTGGATAAGGATCTTCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1
CDS CCA 72 bp	GGAGTTCTGAAGATCCTTATCCAACCTCAAACTTGCTaGTGCTCATGTCTCTGTGGTTCTGAAGTAGAACTA	+
Preference number: 6 (lower is better) Translates to: GVLKILIQPQTC*CSCLCGSEVEL Trigger: TAGTTCTACTTCAGAACCACAGAGACATGAGCACCAGCAAGTTTGAGGTTGGATAAGGATCTTCAGAACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1
CDS TCA 72 bp	CTGTTCTACCATTGCCAAGGAAAATTCCAGTTAGTATaGATGAGGGCCCCAATCTCATATTCTGCATGTTTC	+
Preference number: 6 (lower is better) Translates to: LFYHCQGKFQLV*MRAPISYSACF Trigger: GAAACATGCAGAATATGAGATTGGGGCCCTCATTCATACTAACTGGAATTTTCCTTGGCAATGGTAGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1
CDS GCA 72 bp	TGGGAATTTTTGCTTTTAATACATACTCTGTTACCTTaGTCTACATCATCTAAACAGGTATCAACTGCACTT	+
Preference number: 6 (lower is better) Translates to: WEFLLLIHTLLP*STSSKQVSTAL Trigger: AAGTGCAGTTGATACCTGTTTAGATGATGTAGAGCAAGGTAACAGAGTATGTATTAAAAGCAAAAATTCCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623702.1 ENST00000649605.1

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