Pregenerated sensors for LINC02875 (Homo sapiens)
Ensembl gene IDs: ENSG00000187013Ensembl transcript IDs: ENST00000623772.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCCGCGGCCCGGGCCCTGGCCTGCAGCGCCATCTCGTGGACCTGTaGGGAGTTGCCGAGGCCCGAGGCCTGGGCGGGCTCTGGGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: GRGPGPGLQRHLVDL*GVAEARGLGGLWVR Trigger: GCGAACCCAGAGCCCGCCCAGGCCTCGGGCCTCGGCAACTCCTCACAGGTCCACGAGATGGCGCTGCAGGCCAGGGCCCGGGCCGCGGCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | CCCACGCAGGAGTTCGCGGTCAGCTGGGGAGGCGGGCCCGGGAGCTaGGGCCTTCGGGAGGGCAGGGCCAGGCCATACCGGTGGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: PTQEFAVSWGGGPGS*GLREGRARPYRWLR Trigger: CCGGAGCCACCGGTATGGCCTGGCCCTGCCCTCCCGAAGGCCGCAGCTCCCGGGCCCGCCTCCCCAGCTGACCGCGAACTCCTGCGTGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | CCCGGAGCTCGGGCTTCCTCCCAAGAGGGCGGGGGCTCCCTCCGCTaGCGCCCTGTCCTGCGAGCAGGGAGCGCTCGGCCTCCTGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: PGARASSQEGGGSLR*RPVLRAGSARPPAG Trigger: TCCCGCAGGAGGCCGAGCGCTCCCTGCTCGCAGGACAGGGCGGCAGCGGAGGGAGCCCCCGCCCTCTTGGGAGGAAGCCCGAGCTCCGGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | TCCCTCGGTCCCTCGGCGGCCTGTGCCGGGCTCCGGACCCGGCTCTaGCTGTGTCGGTGGCTGTGCCTCCGTGCCCCGCTTGCCGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SLGPSAACAGLRTRL*LCRWLCLRAPLAGV Trigger: GACCCCGGCAAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTCCGGAGCCCGGCACAGGCCGCCGAGGGACCGAGGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | AGCGCCCGGCAACCAGCCTCCACCCCGAAGGCGCTCCCGGGAGGGTaGCCAGGAGACCCGGAGCTCGGGCTTCCTCCCAAGAGGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: SARQPASTPKALPGG*PGDPELGLPPKRAG Trigger: CCCCGCCCTCTTGGGAGGAAGCCCGAGCTCCGGGTCTCCTGGGCACCCTCCCGGGAGCGCCTTCGGGGTGGAGGCTGGTTGCCGGGCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | GCCGAGGCCCGAGGCCTGGGCGGGCTCTGGGTTCGCTCCCACTCGTaGTCCCGGCGGGGAGCTGCGGGAGCTGCCAAGAGGACTCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AEARGLGGLWVRSHS*SRRGAAGAAKRTRW Trigger: CCAGCGAGTCCTCTTGGCAGCTCCCGCAGCTCCCCGCCGGGAGCACGAGTGGGAGCGAACCCAGAGCCCGCCCAGGCCTCGGGCCTCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | GGGCGGGCTCTGGGTTCGCTCCCACTCGTGCTCCCGGCGGGGAGCTaGGGGAGCTGCCAAGAGGACTCGCTGGGAAACCAGGCGCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: GRALGSLPLVLPAGS*GSCQEDSLGNQARP Trigger: CGGCCGCGCCTGGTTTCCCAGCGAGTCCTCTTGGCAGCTCCCGCAGCTCCCCGCCGGGAGCACGAGTGGGAGCGAACCCAGAGCCCGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | AGCAGGGAGCGCTCGGCCTCCTGCGGGATCCCGCCTGACCGCCGGTaGTCCGCACCTCGGGGCCAAGGACAGCGAAGGAGGGGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SRERSASCGIPPDRR*SAPRGQGQRRRGRK Trigger: CTTCCTCCCCCTCCTTCGCTGTCCTTGGCCCCGAGGTGCGGAGCACCGGCGGTCAGGCGGGATCCCGCAGGAGGCCGAGCGCTCCCTGCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | CCCGGGCCCTGGCCTGCAGCGCCATCTCGTGGACCTGTGAGGAGTTaGCGAGGCCCGAGGCCTGGGCGGGCTCTGGGTTCGCTCCCACTC | + |
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Preference number: 5 (lower is better) Translates to: PGPWPAAPSRGPVRS*RGPRPGRALGSLPL Trigger: GAGTGGGAGCGAACCCAGAGCCCGCCCAGGCCTCGGGCCTCGGCAACTCCTCACAGGTCCACGAGATGGCGCTGCAGGCCAGGGCCCGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | GACCCGGCTCTGCCTGTGTCGGTGGCTGTGCCTCCGTGCCCCGCTTaGCGGGGTCCGCAGTCTATCTCCCGCTCTCGCCCGAGGCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: DPALPVSVAVPPCPA*RGPQSISRSRPRRA Trigger: AGCCCGCCTCGGGCGAGAGCGGGAGATAGACTGCGGACCCCGGCAAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | GCCTGTGCCGGGCTCCGGACCCGGCTCTGCCTGTGTCGGTGGCTGTaGCTCCGTGCCCCGCTTGCCGGGGTCCGCAGTCTATCTCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: ACAGLRTRLCLCRWL*LRAPLAGVRSLSPA Trigger: AGCGGGAGATAGACTGCGGACCCCGGCAAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTCCGGAGCCCGGCACAGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 90 bp | CCCGGGAGCTGCGGCCTTCGGGAGGGCAGGGCCAGGCCATACCGGTaGCTCCGGTTCTCCACAGCAGCGGCGGGGGAGTGGAGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PGSCGLREGRARPYR*LRFSTAAAGEWRRK Trigger: CTTCCTCCTCCACTCCCCCGCCGCTGCTGTGGAGAACCGGAGCCACCGGTATGGCCTGGCCCTGCCCTCCCGAAGGCCGCAGCTCCCGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 90 bp | TCGGCGGCCTGTGCCGGGCTCCGGACCCGGCTCTGCCTGTGTCGGTaGCTGTGCCTCCGTGCCCCGCTTGCCGGGGTCCGCAGTCTATCT | + |
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Preference number: 5 (lower is better) Translates to: SAACAGLRTRLCLCR*LCLRAPLAGVRSLS Trigger: AGATAGACTGCGGACCCCGGCAAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTCCGGAGCCCGGCACAGGCCGCCGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 90 bp | CCCCGCGGGCGCGCAGAAGAGGACAAGCTGGGGTCTGCAGCAGCCTaGAAGGTCGCCGAGCTGGCGCTGCCGGGCGGTTCTGGCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PRGRAEEDKLGSAAA*KVAELALPGGSGSR Trigger: CCTGCTGCCAGAACCGCCCGGCAGCGCCAGCTCGGCGACCTTCCAGGCTGCTGCAGACCCCAGCTTGTCCTCTTCTGCGCGCCCGCGGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 90 bp | AGAACGCGAGGGCCCAGCCCCGCGGGCGCGCAGAAGAGGACAAGCTaGGGTCTGCAGCAGCCTGGAAGGTCGCCGAGCTGGCGCTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RTRGPSPAGAQKRTS*GLQQPGRSPSWRCR Trigger: CCGGCAGCGCCAGCTCGGCGACCTTCCAGGCTGCTGCAGACCCCAGCTTGTCCTCTTCTGCGCGCCCGCGGGGCTGGGCCCTCGCGTTCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 90 bp | CTGGGTTCGCTCCCACTCGTGCTCCCGGCGGGGAGCTGCGGGAGCTaGCAAGAGGACTCGCTGGGAAACCAGGCGCGGCCGTCAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGSLPLVLPAGSCGS*QEDSLGNQARPSAL Trigger: CAGCGCTGACGGCCGCGCCTGGTTTCCCAGCGAGTCCTCTTGGCAGCTCCCGCAGCTCCCCGCCGGGAGCACGAGTGGGAGCGAACCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 90 bp | AGCGCCATCTCGTGGACCTGTGAGGAGTTGCCGAGGCCCGAGGCCTaGGCGGGCTCTGGGTTCGCTCCCACTCGTGCTCCCGGCGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SAISWTCEELPRPEA*AGSGFAPTRAPGGE Trigger: CTCCCCGCCGGGAGCACGAGTGGGAGCGAACCCAGAGCCCGCCCAGGCCTCGGGCCTCGGCAACTCCTCACAGGTCCACGAGATGGCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 90 bp | TCGTGCTCCCGGCGGGGAGCTGCGGGAGCTGCCAAGAGGACTCGCTaGGAAACCAGGCGCGGCCGTCAGCGCTGGAAATCGGTGCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SCSRRGAAGAAKRTR*ETRRGRQRWKSVLP Trigger: CGGAAGCACCGATTTCCAGCGCTGACGGCCGCGCCTGGTTTCCCAGCGAGTCCTCTTGGCAGCTCCCGCAGCTCCCCGCCGGGAGCACGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 90 bp | AGGCGCGGCCGTCAGCGCTGGAAATCGGTGCTTCCGGAGTGGGTTTaGGGTCCCCGGCCCCATCCAATAGGAGGAACAGATATGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RRGRQRWKSVLPEWV*GPRPHPIGGTDMRL Trigger: GAGGCGCATATCTGTTCCTCCTATTGGATGGGGCCGGGGACCCCAAACCCACTCCGGAAGCACCGATTTCCAGCGCTGACGGCCGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | CCGCCCTGTCCTGCGAGCAGGGAGCGCTCGGCCTCCTaGGGGATCCCGCCTGACCGCCGGTGCTCCGCACCT | + |
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Preference number: 6 (lower is better) Translates to: PPCPASRERSAS*GIPPDRRCSAP Trigger: AGGTGCGGAGCACCGGCGGTCAGGCGGGATCCCGCAGGAGGCCGAGCGCTCCCTGCTCGCAGGACAGGGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | CGGGCTTCCTCCCAAGAGGGCGGGGGCTCCCTCCGCTaGCGCCCTGTCCTGCGAGCAGGGAGCGCTCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RASSQEGGGSLR*RPVLRAGSARP Trigger: AGGCCGAGCGCTCCCTGCTCGCAGGACAGGGCGGCAGCGGAGGGAGCCCCCGCCCTCTTGGGAGGAAGCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | CCCTCGGCGGCCTGTGCCGGGCTCCGGACCCGGCTCTaGCTGTGTCGGTGGCTGTGCCTCCGTGCCCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: PSAACAGLRTRL*LCRWLCLRAPL Trigger: AAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTCCGGAGCCCGGCACAGGCCGCCGAGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | CCCCAGGAGCACCCCACGCAGGAGTTCGCGGTCAGCTaGGGAGGCGGGCCCGGGAGCTGCGGCCTTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PQEHPTQEFAVS*GGGPGSCGLRE Trigger: CTCCCGAAGGCCGCAGCTCCCGGGCCCGCCTCCCCAGCTGACCGCGAACTCCTGCGTGGGGTGCTCCTGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | TGTGCCGGGCTCCGGACCCGGCTCTGCCTGTGTCGGTaGCTGTGCCTCCGTGCCCCGCTTGCCGGGGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: CAGLRTRLCLCR*LCLRAPLAGVR Trigger: GCGGACCCCGGCAAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTCCGGAGCCCGGCACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | CGAGGCCTGGGCGGGCTCTGGGTTCGCTCCCACTCGTaGTCCCGGCGGGGAGCTGCGGGAGCTGCCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RGLGGLWVRSHS*SRRGAAGAAKR Trigger: CCTCTTGGCAGCTCCCGCAGCTCCCCGCCGGGAGCACGAGTGGGAGCGAACCCAGAGCCCGCCCAGGCCTCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CAA 90 bp | GGACCCGGCTCTGCCTGTGTCGGTGGCTGTGCCTCCGTGCCCCGCTaGCCGGGGTCCGCAGTCTATCTCCCGCTCTCGCCCGAGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPGSACVGGCASVPR*PGSAVYLPLSPEAG Trigger: GCCCGCCTCGGGCGAGAGCGGGAGATAGACTGCGGACCCCGGCAAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | CTCCCACTCGTGCTCCCGGCGGGGAGCTGCGGGAGCTaGCAAGAGGACTCGCTGGGAAACCAGGCGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: LPLVLPAGSCGS*QEDSLGNQARP Trigger: CGGCCGCGCCTGGTTTCCCAGCGAGTCCTCTTGGCAGCTCCCGCAGCTCCCCGCCGGGAGCACGAGTGGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | GGGCTCCGGACCCGGCTCTGCCTGTGTCGGTGGCTGTaGCTCCGTGCCCCGCTTGCCGGGGTCCGCAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: GLRTRLCLCRWL*LRAPLAGVRSL Trigger: TAGACTGCGGACCCCGGCAAGCGGGGCACGGAGGCACAGCCACCGACACAGGCAGAGCCGGGTCCGGAGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | TGCGGCCTTCGGGAGGGCAGGGCCAGGCCATACCGGTaGCTCCGGTTCTCCACAGCAGCGGCGGGGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: CGLREGRARPYR*LRFSTAAAGEW Trigger: CCACTCCCCCGCCGCTGCTGTGGAGAACCGGAGCCACCGGTATGGCCTGGCCCTGCCCTCCCGAAGGCCGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | GGGCCCAGCCCCGCGGGCGCGCAGAAGAGGACAAGCTaGGGTCTGCAGCAGCCTGGAAGGTCGCCGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GPSPAGAQKRTS*GLQQPGRSPSW Trigger: CCAGCTCGGCGACCTTCCAGGCTGCTGCAGACCCCAGCTTGTCCTCTTCTGCGCGCCCGCGGGGCTGGGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | GGTCTGCAGCAGCCTGGAAGGTCGCCGAGCTGGCGCTaGCGGGCGGTTCTGGCAGCAGGGGAGAAGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLQQPGRSPSWR*RAVLAAGEKAP Trigger: TGGGGCCTTCTCCCCTGCTGCCAGAACCGCCCGGCAGCGCCAGCTCGGCGACCTTCCAGGCTGCTGCAGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | TGGCCTGCAGCGCCATCTCGTGGACCTGTGAGGAGTTaGCGAGGCCCGAGGCCTGGGCGGGCTCTGGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: WPAAPSRGPVRS*RGPRPGRALGS Trigger: CGAACCCAGAGCCCGCCCAGGCCTCGGGCCTCGGCAACTCCTCACAGGTCCACGAGATGGCGCTGCAGGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | CGGCGGGGAGCTGCGGGAGCTGCCAAGAGGACTCGCTaGGAAACCAGGCGCGGCCGTCAGCGCTGGAAATCG | + |
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Preference number: 6 (lower is better) Translates to: RRGAAGAAKRTR*ETRRGRQRWKS Trigger: CGATTTCCAGCGCTGACGGCCGCGCCTGGTTTCCCAGCGAGTCCTCTTGGCAGCTCCCGCAGCTCCCCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | TCGTGGACCTGTGAGGAGTTGCCGAGGCCCGAGGCCTaGGCGGGCTCTGGGTTCGCTCCCACTCGTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SWTCEELPRPEA*AGSGFAPTRAP Trigger: GGGAGCACGAGTGGGAGCGAACCCAGAGCCCGCCCAGGCCTCGGGCCTCGGCAACTCCTCACAGGTCCACGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | AGCTGGGGTCTGCAGCAGCCTGGAAGGTCGCCGAGCTaGCGCTGCCGGGCGGTTCTGGCAGCAGGGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SWGLQQPGRSPS*RCRAVLAAGEK Trigger: CTTCTCCCCTGCTGCCAGAACCGCCCGGCAGCGCCAGCTCGGCGACCTTCCAGGCTGCTGCAGACCCCAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS GCA 72 bp | CTGGGTTCGCTCCCACTCGTGCTCCCGGCGGGGAGCTaGGGGAGCTGCCAAGAGGACTCGCTGGGAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: LGSLPLVLPAGS*GSCQEDSLGNQ Trigger: CTGGTTTCCCAGCGAGTCCTCTTGGCAGCTCCCGCAGCTCCCCGCCGGGAGCACGAGTGGGAGCGAACCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | AGGACTCGCTGGGAAACCAGGCGCGGCCGTCAGCGCTaGAAATCGGTGCTTCCGGAGTGGGTTTGGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RTRWETRRGRQR*KSVLPEWVWGP Trigger: GGGACCCCAAACCCACTCCGGAAGCACCGATTTCCAGCGCTGACGGCCGCGCCTGGTTTCCCAGCGAGTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | GACAGCGAAGGAGGGGGAGGAAGCGGGACTGGATTTTaGGTCCTTCCCAGAGCGGAGGAAGGCAGGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: DSEGGGGSGTGF*VLPRAEEGRLG Trigger: CCCGAGCCTGCCTTCCTCCGCTCTGGGAAGGACCCAAAATCCAGTCCCGCTTCCTCCCCCTCCTTCGCTGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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| CDS CCA 72 bp | GGCCAAGGACAGCGAAGGAGGGGGAGGAAGCGGGACTaGATTTTGGGTCCTTCCCAGAGCGGAGGAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GQGQRRRGRKRD*ILGPSQSGGRQ Trigger: CTGCCTTCCTCCGCTCTGGGAAGGACCCAAAATCCAGTCCCGCTTCCTCCCCCTCCTTCGCTGTCCTTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623772.1 |
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