Pregenerated sensors for LINC02865 (Homo sapiens)
Ensembl gene IDs: ENSG00000229922Ensembl transcript IDs: ENST00000417800.1, ENST00000434437.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCCACTGCTGGGGACGTGAGGCCTGGAGCACACAGTGCCTGTGTTaGAGGGCTGTGAGAAGGTGGCCACAGGCTCAGAATCAGGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GHCWGREAWSTQCLC*RAVRRWPQAQNQAK Trigger: TTTGGCCTGATTCTGAGCCTGTGGCCACCTTCTCACAGCCCTGCAACACAGGCACTGTGTGCTCCAGGCCTCACGTCCCCAGCAGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS GCA 90 bp | GCACAGTCAGGCCACTGCTGGGGACGTGAGGCCTGGAGCACACAGTaGCTGTGTTGCAGGGCTGTGAGAAGGTGGCCACAGGCTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: AQSGHCWGREAWSTQ*LCCRAVRRWPQAQN Trigger: ATTCTGAGCCTGTGGCCACCTTCTCACAGCCCTGCAACACAGGCACTGTGTGCTCCAGGCCTCACGTCCCCAGCAGTGGCCTGACTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS TCA 90 bp | ACTGAGGCTGTGGCTAAGTGCACAGTCAGGCCACTGCTGGGGACGTaGGGCCTGGAGCACACAGTGCCTGTGTTGCAGGGCTGTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: TEAVAKCTVRPLLGT*GLEHTVPVLQGCEK Trigger: CTTCTCACAGCCCTGCAACACAGGCACTGTGTGCTCCAGGCCTCACGTCCCCAGCAGTGGCCTGACTGTGCACTTAGCCACAGCCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS GCA 90 bp | AGCACAGGCAAACTGAGGCTGTGGCTAAGTGCACAGTCAGGCCACTaGTGGGGACGTGAGGCCTGGAGCACACAGTGCCTGTGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STGKLRLWLSAQSGH*WGREAWSTQCLCCR Trigger: CCTGCAACACAGGCACTGTGTGCTCCAGGCCTCACGTCCCCAGCAGTGGCCTGACTGTGCACTTAGCCACAGCCTCAGTTTGCCTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS CCA 90 bp | ACAGGCAAACTGAGGCTGTGGCTAAGTGCACAGTCAGGCCACTGCTaGGGACGTGAGGCCTGGAGCACACAGTGCCTGTGTTGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TGKLRLWLSAQSGHC*GREAWSTQCLCCRA Trigger: AGCCCTGCAACACAGGCACTGTGTGCTCCAGGCCTCACGTCCCCAGCAGTGGCCTGACTGTGCACTTAGCCACAGCCTCAGTTTGCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS TCA 90 bp | GGATGTTCAAATCATGCAGATTATCAAATCAACCTGCTGACAAGATaGAAAGGCAGGGATAGCCATGTTCAGAACTTCTCTCAGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: GCSNHADYQINLLTR*KGRDSHVQNFSQEP Trigger: GGGCTCCTGAGAGAAGTTCTGAACATGGCTATCCCTGCCTTTTCATCTTGTCAGCAGGTTGATTTGATAATCTGCATGATTTGAACATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417800.1 |
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| CDS GCA 90 bp | GTCATGGAACAGAGGCTCACAGACCAAATTAGGATGTTCAAATCATaGAGATTATCAAATCAACCTGCTGACAAGATGAAAAGGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: VMEQRLTDQIRMFKS*RLSNQPADKMKRQG Trigger: TCCCTGCCTTTTCATCTTGTCAGCAGGTTGATTTGATAATCTGCATGATTTGAACATCCTAATTTGGTCTGTGAGCCTCTGTTCCATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417800.1 |
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| CDS GCA 90 bp | CATCTGCTGACAAAGCTTAGCATTGTGCTCACTGTAAAGGAGAAATaGTTAAAGGGTCCATTGCATATTTGTAGAGCAGCTGCTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: HLLTKLSIVLTVKEK*LKGPLHICRAAAEE Trigger: TTCTTCAGCAGCTGCTCTACAAATATGCAATGGACCCTTTAAGCATTTCTCCTTTACAGTGAGCACAATGCTAAGCTTTGTCAGCAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS TCA 72 bp | GTGGCTAAGTGCACAGTCAGGCCACTGCTGGGGACGTaGGGCCTGGAGCACACAGTGCCTGTGTTGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VAKCTVRPLLGT*GLEHTVPVLQG Trigger: GCCCTGCAACACAGGCACTGTGTGCTCCAGGCCTCACGTCCCCAGCAGTGGCCTGACTGTGCACTTAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS TCA 72 bp | GGTGGCCACAGGCTCAGAATCAGGCCAAATAGTCAGTaGGGGATGTGCCTCTGGGCAGGTGGTAGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GGHRLRIRPNSQ*GMCLWAGGRAG Trigger: CCCTGCCCTACCACCTGCCCAGAGGCACATCCCTCACTGACTATTTGGCCTGATTCTGAGCCTGTGGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS CCA 72 bp | GATGCAATTTCTTGGAGCACAGGCAAACTGAGGCTGTaGCTAAGTGCACAGTCAGGCCACTGCTGGGGACGT | + |
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Preference number: 6 (lower is better) Translates to: DAISWSTGKLRL*LSAQSGHCWGR Trigger: ACGTCCCCAGCAGTGGCCTGACTGTGCACTTAGCCACAGCCTCAGTTTGCCTGTGCTCCAAGAAATTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS GCA 72 bp | GCACACCAAAATCAGGAAGAGAAACTCGCTTTCTTCTaGAATGCTGCTCCAGTGGCATCTGCTGACAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: AHQNQEEKLAFF*NAAPVASADKA Trigger: AGCTTTGTCAGCAGATGCCACTGGAGCAGCATTGCAGAAGAAAGCGAGTTTCTCTTCCTGATTTTGGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS CCA 72 bp | AAGAGAAACTCGCTTTCTTCTGCAATGCTGCTCCAGTaGCATCTGCTGACAAAGCTTAGCATTGTGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: KRNSLSSAMLLQ*HLLTKLSIVLT Trigger: AGTGAGCACAATGCTAAGCTTTGTCAGCAGATGCCACTGGAGCAGCATTGCAGAAGAAAGCGAGTTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS CAA 72 bp | GTGCTCACTGTAAAGGAGAAATGCTTAAAGGGTCCATaGCATATTTGTAGAGCAGCTGCTGAAGAAATCTGC | + |
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Preference number: 6 (lower is better) Translates to: VLTVKEKCLKGP*HICRAAAEEIC Trigger: GCAGATTTCTTCAGCAGCTGCTCTACAAATATGCAATGGACCCTTTAAGCATTTCTCCTTTACAGTGAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS TCA 72 bp | GATGTTCAAATCATGCAGATTATCAAATCAACCTGCTaGCAAGATGAAAAGGCAGGGATAGCCATGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DVQIMQIIKSTC*QDEKAGIAMFR Trigger: TCTGAACATGGCTATCCCTGCCTTTTCATCTTGTCAGCAGGTTGATTTGATAATCTGCATGATTTGAACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417800.1 |
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| CDS GCA 72 bp | ACAAAGCTTAGCATTGTGCTCACTGTAAAGGAGAAATaGTTAAAGGGTCCATTGCATATTTGTAGAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TKLSIVLTVKEK*LKGPLHICRAA Trigger: AGCTGCTCTACAAATATGCAATGGACCCTTTAAGCATTTCTCCTTTACAGTGAGCACAATGCTAAGCTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434437.5 |
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| CDS GCA 72 bp | CAGAGGCTCACAGACCAAATTAGGATGTTCAAATCATaGAGATTATCAAATCAACCTGCTGACAAGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: QRLTDQIRMFKS*RLSNQPADKMK Trigger: TTTCATCTTGTCAGCAGGTTGATTTGATAATCTGCATGATTTGAACATCCTAATTTGGTCTGTGAGCCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417800.1 |
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