Pregenerated sensors for LINC02858 (Homo sapiens)
Ensembl gene IDs: ENSG00000285869Ensembl transcript IDs: ENST00000648468.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGCAGTGGGCTTACTGGTGGCTGGAGCAGTACCAGAGGTCCTCTaGGAAGGAGGTCACCGCAGTGACCTCACAGGCTGTCCTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: EAVGLLVAGAVPEVL*EGGHRSDLTGCPVP Trigger: AGGAACAGGACAGCCTGTGAGGTCACTGCGGTGACCTCCTTCGCAGAGGACCTCTGGTACTGCTCCAGCCACCAGTAAGCCCACTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | GTAAGGGCAGCATTGAGCAGTGCCCAGAGGCAGTGGGCTTACTGGTaGCTGGAGCAGTACCAGAGGTCCTCTGCGAAGGAGGTCACCGCA | + |
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Preference number: 5 (lower is better) Translates to: VRAALSSAQRQWAYW*LEQYQRSSAKEVTA Trigger: TGCGGTGACCTCCTTCGCAGAGGACCTCTGGTACTGCTCCAGCCACCAGTAAGCCCACTGCCTCTGGGCACTGCTCAATGCTGCCCTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | CAGGTAAGGGCAGCATTGAGCAGTGCCCAGAGGCAGTGGGCTTACTaGTGGCTGGAGCAGTACCAGAGGTCCTCTGCGAAGGAGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: QVRAALSSAQRQWAY*WLEQYQRSSAKEVT Trigger: GGTGACCTCCTTCGCAGAGGACCTCTGGTACTGCTCCAGCCACCAGTAAGCCCACTGCCTCTGGGCACTGCTCAATGCTGCCCTTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS GCA 90 bp | GACAAGCTTGATGGTCTGGGTCCAGGTAAGGGCAGCATTGAGCAGTaGCCAGAGGCAGTGGGCTTACTGGTGGCTGGAGCAGTACCAGAG | + |
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Preference number: 5 (lower is better) Translates to: DKLDGLGPGKGSIEQ*PEAVGLLVAGAVPE Trigger: CTCTGGTACTGCTCCAGCCACCAGTAAGCCCACTGCCTCTGGGCACTGCTCAATGCTGCCCTTACCTGGACCCAGACCATCAAGCTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 90 bp | GGCTGGAGCAGTACCAGAGGTCCTCTGCGAAGGAGGTCACCGCAGTaGCCTCACAGGCTGTCCTGTTCCTTCCTTATTTGTGATGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GWSSTRGPLRRRSPQ*PHRLSCSFLICDVK Trigger: CTTGACATCACAAATAAGGAAGGAACAGGACAGCCTGTGAGGTCACTGCGGTGACCTCCTTCGCAGAGGACCTCTGGTACTGCTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | GAGACAAGGAGGGAAGGGCAAGGGTGGGCTAGCCAATTAAGACCATaGAGCATGACTCCGTCCACCCCTTCTGGTTCCTGTCTTGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ETRREGQGWASQLRP*SMTPSTPSGSCLGL Trigger: AAGACCAAGACAGGAACCAGAAGGGGTGGACGGAGTCATGCTCCATGGTCTTAATTGGCTAGCCCACCCTTGCCCTTCCCTCCTTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | GTGCTTGGCCACTGGAGTGGGTGGCTCCATAAGATGACTCTTGGATaGTTTCAGGCTCTTCCTGGACACCCAGGACTGGTCCATGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: VLGHWSGWLHKMTLG*FQALPGHPGLVHEL Trigger: AAGCTCATGGACCAGTCCTGGGTGTCCAGGAAGAGCCTGAAACCATCCAAGAGTCATCTTATGGAGCCACCCACTCCAGTGGCCAAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 90 bp | TCTTGGATGGTTTCAGGCTCTTCCTGGACACCCAGGACTGGTCCATaGGCTTGGGCTCAGCTGGGAAATCCTCAGGGAGATAGACATCTG | + |
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Preference number: 5 (lower is better) Translates to: SWMVSGSSWTPRTGP*AWAQLGNPQGDRHL Trigger: CAGATGTCTATCTCCCTGAGGATTTCCCAGCTGAGCCCAAGCTCATGGACCAGTCCTGGGTGTCCAGGAAGAGCCTGAAACCATCCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 90 bp | TTTGCCTTTTGGTGCTTGGCCACTGGAGTGGGTGGCTCCATAAGATaGCTCTTGGATGGTTTCAGGCTCTTCCTGGACACCCAGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: FAFWCLATGVGGSIR*LLDGFRLFLDTQDW Trigger: CCAGTCCTGGGTGTCCAGGAAGAGCCTGAAACCATCCAAGAGTCATCTTATGGAGCCACCCACTCCAGTGGCCAAGCACCAAAAGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 90 bp | TGGAGCATGACTCCGTCCACCCCTTCTGGTTCCTGTCTTGGTCTTTaGGACCTATGCTCTCCAAAGTTGTGGGCTGCAAAGGATAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: WSMTPSTPSGSCLGL*DLCSPKLWAAKDRE Trigger: CTCCCTATCCTTTGCAGCCCACAACTTTGGAGAGCATAGGTCTCAAAGACCAAGACAGGAACCAGAAGGGGTGGACGGAGTCATGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | CCTATGTCGGGTCTTTGCCTTTTGGTGCTTGGCCACTGGAGTGGGTaGCTCCATAAGATGACTCTTGGATGGTTTCAGGCTCTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PMSGLCLLVLGHWSG*LHKMTLGWFQALPG Trigger: TCCAGGAAGAGCCTGAAACCATCCAAGAGTCATCTTATGGAGCCACCCACTCCAGTGGCCAAGCACCAAAAGGCAAAGACCCGACATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS GCA 90 bp | ATTGGCCAAGATACCAGCACATCAGCCCCAGCTGGTGAGAGTGGCTaGCTTCTTCACAATCACTCCTCTACAGTCAGTAGTGTGATGGTC | + |
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Preference number: 5 (lower is better) Translates to: IGQDTSTSAPAGESG*LLHNHSSTVSSVMV Trigger: GACCATCACACTACTGACTGTAGAGGAGTGATTGTGAAGAAGGCAGCCACTCTCACCAGCTGGGGCTGATGTGCTGGTATCTTGGCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | AAGACCATGGAGCATGACTCCGTCCACCCCTTCTGGTTCCTGTCTTaGTCTTTGAGACCTATGCTCTCCAAAGTTGTGGGCTGCAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: KTMEHDSVHPFWFLS*SLRPMLSKVVGCKG Trigger: TCCTTTGCAGCCCACAACTTTGGAGAGCATAGGTCTCAAAGACCAAGACAGGAACCAGAAGGGGTGGACGGAGTCATGCTCCATGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | CTTCTCACTCCTATGTCGGGTCTTTGCCTTTTGGTGCTTGGCCACTaGAGTGGGTGGCTCCATAAGATGACTCTTGGATGGTTTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLTPMSGLCLLVLGH*SGWLHKMTLGWFQA Trigger: AGCCTGAAACCATCCAAGAGTCATCTTATGGAGCCACCCACTCCAGTGGCCAAGCACCAAAAGGCAAAGACCCGACATAGGAGTGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | GCAGTTTTTCAGCAACAACACTTAGTGAGTGCTAATCCTGGACATTaGGGATCGAGAAATGAACAAGGACTATCCCTGCCCGCCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: AVFQQQHLVSANPGH*GSRNEQGLSLPAWS Trigger: GCTCCAGGCGGGCAGGGATAGTCCTTGTTCATTTCTCGATCCCCAATGTCCAGGATTAGCACTCACTAAGTGTTGTTGCTGAAAAACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS GCA 90 bp | TTGAGGTTTCTGGGGAAGGCTGGAACACTTTGTCTGGAGTATTCATaGCATAGGTCATTGGAACTCTCCAGCAGGATGGAGAGTAACAGG | + |
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Preference number: 5 (lower is better) Translates to: LRFLGKAGTLCLEYS*HRSLELSSRMESNR Trigger: CCTGTTACTCTCCATCCTGCTGGAGAGTTCCAATGACCTATGGCATGAATACTCCAGACAAAGTGTTCCAGCCTTCCCCAGAAACCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | GTCTGGAGTATTCATGCCATAGGTCATTGGAACTCTCCAGCAGGATaGAGAGTAACAGGAAACTGTCTTGGATGTCATGTCTGGGATGCC | + |
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Preference number: 5 (lower is better) Translates to: VWSIHAIGHWNSPAG*RVTGNCLGCHVWDA Trigger: GGCATCCCAGACATGACATCCAAGACAGTTTCCTGTTACTCTCCATCCTGCTGGAGAGTTCCAATGACCTATGGCATGAATACTCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 90 bp | GGAAGGCTGGAACACTTTGTCTGGAGTATTCATGCCATAGGTCATTaGAACTCTCCAGCAGGATGGAGAGTAACAGGAAACTGTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GRLEHFVWSIHAIGH*NSPAGWRVTGNCLG Trigger: TCCAAGACAGTTTCCTGTTACTCTCCATCCTGCTGGAGAGTTCCAATGACCTATGGCATGAATACTCCAGACAAAGTGTTCCAGCCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS GCA 72 bp | GATGGTCTGGGTCCAGGTAAGGGCAGCATTGAGCAGTaGCCAGAGGCAGTGGGCTTACTGGTGGCTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: DGLGPGKGSIEQ*PEAVGLLVAGA Trigger: TGCTCCAGCCACCAGTAAGCCCACTGCCTCTGGGCACTGCTCAATGCTGCCCTTACCTGGACCCAGACCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | CAGGTAAGGGCAGCATTGAGCAGTGCCCAGAGGCAGTaGGCTTACTGGTGGCTGGAGCAGTACCAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QVRAALSSAQRQ*AYWWLEQYQRS Trigger: GGACCTCTGGTACTGCTCCAGCCACCAGTAAGCCCACTGCCTCTGGGCACTGCTCAATGCTGCCCTTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 72 bp | GTTTCAGGCTCTTCCTGGACACCCAGGACTGGTCCATaGGCTTGGGCTCAGCTGGGAAATCCTCAGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: VSGSSWTPRTGP*AWAQLGNPQGD Trigger: ATCTCCCTGAGGATTTCCCAGCTGAGCCCAAGCTCATGGACCAGTCCTGGGTGTCCAGGAAGAGCCTGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | AGGGAAGGGCAAGGGTGGGCTAGCCAATTAAGACCATaGAGCATGACTCCGTCCACCCCTTCTGGTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: REGQGWASQLRP*SMTPSTPSGSC Trigger: ACAGGAACCAGAAGGGGTGGACGGAGTCATGCTCCATGGTCTTAATTGGCTAGCCCACCCTTGCCCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 72 bp | TGGTGCTTGGCCACTGGAGTGGGTGGCTCCATAAGATaGCTCTTGGATGGTTTCAGGCTCTTCCTGGACACC | + |
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Preference number: 6 (lower is better) Translates to: WCLATGVGGSIR*LLDGFRLFLDT Trigger: GGTGTCCAGGAAGAGCCTGAAACCATCCAAGAGTCATCTTATGGAGCCACCCACTCCAGTGGCCAAGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | TTGGATGGTTTCAGGCTCTTCCTGGACACCCAGGACTaGTCCATGAGCTTGGGCTCAGCTGGGAAATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LDGFRLFLDTQD*SMSLGSAGKSS Trigger: TGAGGATTTCCCAGCTGAGCCCAAGCTCATGGACCAGTCCTGGGTGTCCAGGAAGAGCCTGAAACCATCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | CACTGGAGTGGGTGGCTCCATAAGATGACTCTTGGATaGTTTCAGGCTCTTCCTGGACACCCAGGACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: HWSGWLHKMTLG*FQALPGHPGLV Trigger: GACCAGTCCTGGGTGTCCAGGAAGAGCCTGAAACCATCCAAGAGTCATCTTATGGAGCCACCCACTCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 72 bp | AGTACCAGAGGTCCTCTGCGAAGGAGGTCACCGCAGTaGCCTCACAGGCTGTCCTGTTCCTTCCTTATTTGT | + |
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Preference number: 6 (lower is better) Translates to: STRGPLRRRSPQ*PHRLSCSFLIC Trigger: ACAAATAAGGAAGGAACAGGACAGCCTGTGAGGTCACTGCGGTGACCTCCTTCGCAGAGGACCTCTGGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | GAGCATGACTCCGTCCACCCCTTCTGGTTCCTGTCTTaGTCTTTGAGACCTATGCTCTCCAAAGTTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: EHDSVHPFWFLS*SLRPMLSKVVG Trigger: GCCCACAACTTTGGAGAGCATAGGTCTCAAAGACCAAGACAGGAACCAGAAGGGGTGGACGGAGTCATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | CCTATGTCGGGTCTTTGCCTTTTGGTGCTTGGCCACTaGAGTGGGTGGCTCCATAAGATGACTCTTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: PMSGLCLLVLGH*SGWLHKMTLGW Trigger: CCATCCAAGAGTCATCTTATGGAGCCACCCACTCCAGTGGCCAAGCACCAAAAGGCAAAGACCCGACATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 90 bp | AAGGCTACCAATGAGACATCAGACAAGAGTGCTGGTCCCATCTCATaGGCCAAGATACCAGCACATCAGCCCCAGCTGGTGAGAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KATNETSDKSAGPIS*AKIPAHQPQLVRVA Trigger: AGCCACTCTCACCAGCTGGGGCTGATGTGCTGGTATCTTGGCCAATGAGATGGGACCAGCACTCTTGTCTGATGTCTCATTGGTAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 72 bp | ACTCCGTCCACCCCTTCTGGTTCCTGTCTTGGTCTTTaGGACCTATGCTCTCCAAAGTTGTGGGCTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TPSTPSGSCLGL*DLCSPKLWAAK Trigger: CTTTGCAGCCCACAACTTTGGAGAGCATAGGTCTCAAAGACCAAGACAGGAACCAGAAGGGGTGGACGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS GCA 72 bp | GACATTGGGGATCGAGAAATGAACAAGGACTATCCCTaGCCGCCTGGAGCTCACAAGCTGGTAGAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: DIGDREMNKDYP*PPGAHKLVEET Trigger: TGTCTCTTCTACCAGCTTGTGAGCTCCAGGCGGGCAGGGATAGTCCTTGTTCATTTCTCGATCCCCAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | GCTCAGCTGGGAAATCCTCAGGGAGATAGACATCTGTaGCCTCTGAGATTGATAAGGGTAACTGGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: AQLGNPQGDRHL*PLRLIRVTGAL Trigger: CAGAGCCCCAGTTACCCTTATCAATCTCAGAGGCCACAGATGTCTATCTCCCTGAGGATTTCCCAGCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 72 bp | GACTCCGTCCACCCCTTCTGGTTCCTGTCTTGGTCTTaGAGACCTATGCTCTCCAAAGTTGTGGGCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: DSVHPFWFLSWS*RPMLSKVVGCK Trigger: TTTGCAGCCCACAACTTTGGAGAGCATAGGTCTCAAAGACCAAGACAGGAACCAGAAGGGGTGGACGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS GCA 72 bp | CTGGGGAAGGCTGGAACACTTTGTCTGGAGTATTCATaGCATAGGTCATTGGAACTCTCCAGCAGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGKAGTLCLEYS*HRSLELSSRME Trigger: CTCCATCCTGCTGGAGAGTTCCAATGACCTATGGCATGAATACTCCAGACAAAGTGTTCCAGCCTTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | ATTAAGACCATGGAGCATGACTCCGTCCACCCCTTCTaGTTCCTGTCTTGGTCTTTGAGACCTATGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IKTMEHDSVHPF*FLSWSLRPMLS Trigger: GGAGAGCATAGGTCTCAAAGACCAAGACAGGAACCAGAAGGGGTGGACGGAGTCATGCTCCATGGTCTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 72 bp | TTGTTTCTTCTCACTCCTATGTCGGGTCTTTGCCTTTaGGTGCTTGGCCACTGGAGTGGGTGGCTCCATAAG | + |
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Preference number: 6 (lower is better) Translates to: LFLLTPMSGLCL*VLGHWSGWLHK Trigger: CTTATGGAGCCACCCACTCCAGTGGCCAAGCACCAAAAGGCAAAGACCCGACATAGGAGTGAGAAGAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS GCA 72 bp | TTTGTTTTGTTTCTTCTCACTCCTATGTCGGGTCTTTaGCTTTTGGTGCTTGGCCACTGGAGTGGGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FVLFLLTPMSGL*LLVLGHWSGWL Trigger: GAGCCACCCACTCCAGTGGCCAAGCACCAAAAGGCAAAGACCCGACATAGGAGTGAGAAGAAACAAAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 90 bp | GGGAAGGCTGGAACACTTTGTCTGGAGTATTCATGCCATAGGTCATaGGAACTCTCCAGCAGGATGGAGAGTAACAGGAAACTGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GKAGTLCLEYSCHRS*ELSSRMESNRKLSW Trigger: CCAAGACAGTTTCCTGTTACTCTCCATCCTGCTGGAGAGTTCCAATGACCTATGGCATGAATACTCCAGACAAAGTGTTCCAGCCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 72 bp | ATTTGTTTTGTTTCTTCTCACTCCTATGTCGGGTCTTaGCCTTTTGGTGCTTGGCCACTGGAGTGGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ICFVSSHSYVGS*PFGAWPLEWVA Trigger: AGCCACCCACTCCAGTGGCCAAGCACCAAAAGGCAAAGACCCGACATAGGAGTGAGAAGAAACAAAACAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CCA 72 bp | GAACACTTTGTCTGGAGTATTCATGCCATAGGTCATTaGAACTCTCCAGCAGGATGGAGAGTAACAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: EHFVWSIHAIGH*NSPAGWRVTGN Trigger: GTTTCCTGTTACTCTCCATCCTGCTGGAGAGTTCCAATGACCTATGGCATGAATACTCCAGACAAAGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 72 bp | GGAACACTTTGTCTGGAGTATTCATGCCATAGGTCATaGGAACTCTCCAGCAGGATGGAGAGTAACAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GTLCLEYSCHRS*ELSSRMESNRK Trigger: TTTCCTGTTACTCTCCATCCTGCTGGAGAGTTCCAATGACCTATGGCATGAATACTCCAGACAAAGTGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 90 bp | GCTGAAAAGGACCAGGTCGATGGAGATGCCAAGCATTTATTTGTTTaGTTTCTTCTCACTCCTATGTCGGGTCTTTGCCTTTTGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AEKDQVDGDAKHLFV*FLLTPMSGLCLLVL Trigger: AAGCACCAAAAGGCAAAGACCCGACATAGGAGTGAGAAGAAACAAAACAAATAAATGCTTGGCATCTCCATCGACCTGGTCCTTTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS TCA 72 bp | TCAAGGTCATCCCTGGGTGATCCTTTCATCCATGTATaGTGCAGTTTTTCAGCAACAACACTTAGTGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: SRSSLGDPFIHV*CSFSATTLSEC Trigger: GCACTCACTAAGTGTTGTTGCTGAAAAACTGCATCATACATGGATGAAAGGATCACCCAGGGATGACCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 72 bp | GGGTCTTTGGTCTTGTTTAAAGACATCTTGAGTTTTTaGGCCTTGGAAGTCTTGGAGTGCCTGAGAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: GSLVLFKDILSF*ALEVLECLRDF Trigger: AAAGTCTCTCAGGCACTCCAAGACTTCCAAGGCCAAAAAACTCAAGATGTCTTTAAACAAGACCAAAGACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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| CDS CAA 72 bp | TCTAATCCAGTGCTTCCTCCTAGAAGCTGTGTACTCTaGAACAAGTGTCTTTACATCTCTGGGCTTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: SNPVLPPRSCVL*NKCLYISGLHF Trigger: AAAATGAAGCCCAGAGATGTAAAGACACTTGTTCAAGAGTACACAGCTTCTAGGAGGAAGCACTGGATTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648468.1 |
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