Pregenerated sensors for LINC02839 (Homo sapiens)

Ensembl gene IDs: ENSG00000254123

Ensembl transcript IDs: ENST00000520988.1, ENST00000654599.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AAACTGGAGACTGAGGAGAGCTGGTGGTATAATTCAGCTTCAGTCTaGAGGCCTGAGAAACAGGGGAGCCTGGATGATGGAATAATGAGC	+
Preference number: 5 (lower is better) Translates to: KLETEESWWYNSASV*RPEKQGSLDDGIMS Trigger: GCTCATTATTCCATCATCCAGGCTCCCCTGTTTCTCAGGCCTCCAGACTGAAGCTGAATTATACCACCAGCTCTCCTCAGTCTCCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520988.1 ENST00000654599.1
CDS CCA 90 bp	GTGATTATGGAGGCTGAGAAGTCCCATGATCTGTTGTCTGCAAACTaGAGACTGAGGAGAGCTGGTGGTATAATTCAGCTTCAGTCTGGA	+
Preference number: 5 (lower is better) Translates to: VIMEAEKSHDLLSAN*RLRRAGGIIQLQSG Trigger: TCCAGACTGAAGCTGAATTATACCACCAGCTCTCCTCAGTCTCCAGTTTGCAGACAACAGATCATGGGACTTCTCAGCCTCCATAATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520988.1 ENST00000654599.1
CDS CCA 72 bp	ACTGAGGAGAGCTGGTGGTATAATTCAGCTTCAGTCTaGAGGCCTGAGAAACAGGGGAGCCTGGATGATGGA	+
Preference number: 6 (lower is better) Translates to: TEESWWYNSASV*RPEKQGSLDDG Trigger: TCCATCATCCAGGCTCCCCTGTTTCTCAGGCCTCCAGACTGAAGCTGAATTATACCACCAGCTCTCCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520988.1 ENST00000654599.1
CDS CAA 72 bp	CCTGTGATTATGGAGGCTGAGAAGTCCCATGATCTGTaGTCTGCAAACTGGAGACTGAGGAGAGCTGGTGGT	+
Preference number: 6 (lower is better) Translates to: PVIMEAEKSHDL*SANWRLRRAGG Trigger: ACCACCAGCTCTCCTCAGTCTCCAGTTTGCAGACAACAGATCATGGGACTTCTCAGCCTCCATAATCACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520988.1 ENST00000654599.1
CDS CCA 72 bp	GAGGCTGAGAAGTCCCATGATCTGTTGTCTGCAAACTaGAGACTGAGGAGAGCTGGTGGTATAATTCAGCTT	+
Preference number: 6 (lower is better) Translates to: EAEKSHDLLSAN*RLRRAGGIIQL Trigger: AAGCTGAATTATACCACCAGCTCTCCTCAGTCTCCAGTTTGCAGACAACAGATCATGGGACTTCTCAGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520988.1 ENST00000654599.1
CDS CAA 90 bp	GAATTGACTCCTGTGATTATGGAGGCTGAGAAGTCCCATGATCTGTaGTCTGCAAACTGGAGACTGAGGAGAGCTGGTGGTATAATTCAG	+
Preference number: 6 (lower is better) Translates to: ELTPVIMEAEKSHDL*SANWRLRRAGGIIQ Trigger: CTGAATTATACCACCAGCTCTCCTCAGTCTCCAGTTTGCAGACAACAGATCATGGGACTTCTCAGCCTCCATAATCACAGGAGTCAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520988.1 ENST00000654599.1

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