Pregenerated sensors for LINC02837 (Homo sapiens)
Ensembl gene IDs: ENSG00000264464Ensembl transcript IDs: ENST00000582983.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACTGGGTCCACTTTGATGAGTTCAGGCAGCAGCGAGCGCGGAATGTaGTGTGGTGGATCAAGCCCTGCTGCGGTGCACACTGCGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: TGSTLMSSGSSERGM*CGGSSPAAVHTAMC Trigger: GCACATCGCAGTGTGCACCGCAGCAGGGCTTGATCCACCACATCACATTCCGCGCTCGCTGCTGCCTGAACTCATCAAAGTGGACCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 90 bp | GTCCACTTTGATGAGTTCAGGCAGCAGCGAGCGCGGAATGTGATGTaGTGGATCAAGCCCTGCTGCGGTGCACACTGCGATGTGCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: VHFDEFRQQRARNVM*WIKPCCGAHCDVLP Trigger: GGGAAGCACATCGCAGTGTGCACCGCAGCAGGGCTTGATCCACCACATCACATTCCGCGCTCGCTGCTGCCTGAACTCATCAAAGTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 90 bp | AGAGATTTGCACAGGTCCACGGAGCTGCTCAGCAAAGGGAGGGTCTaGAGGAGTGCTATCCAGCAGACTAAAGGCAAGGCACCAGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: RDLHRSTELLSKGRV*RSAIQQTKGKAPAL Trigger: GAGGGCTGGTGCCTTGCCTTTAGTCTGCTGGATAGCACTCCTCCAGACCCTCCCTTTGCTGAGCAGCTCCGTGGACCTGTGCAAATCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS GCA 90 bp | GGCAAGGGATTAAGACTTTCCTCTCCTCCCACCACCCTACCCTACTaGCCGCTCTCCTGGAGGCCCAGGAGCCAATCCTCTAAAGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: GKGLRLSSPPTTLPY*PLSWRPRSQSSKEN Trigger: ATTCTCTTTAGAGGATTGGCTCCTGGGCCTCCAGGAGAGCGGGCAGTAGGGTAGGGTGGTGGGAGGAGAGGAAAGTCTTAATCCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS GCA 90 bp | GTTGTCCAACAAAGCTGGGTAGAGATTTGCACAGGTCCACGGAGCTaGTCAGCAAAGGGAGGGTCTGGAGGAGTGCTATCCAGCAGACTA | + |
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Preference number: 5 (lower is better) Translates to: VVQQSWVEICTGPRS*SAKGGSGGVLSSRL Trigger: TAGTCTGCTGGATAGCACTCCTCCAGACCCTCCCTTTGCTGAGCAGCTCCGTGGACCTGTGCAAATCTCTACCCAGCTTTGTTGGACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 90 bp | CTACAGGTATCCTGGTGCTCTGCTTGGAATTCAATCCCGTGTTCCTaGCCTCATGAATGTACCCAGCCTCAGCACCAGAATAGTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LQVSWCSAWNSIPCS*PHECTQPQHQNSPP Trigger: AGGAGGACTATTCTGGTGCTGAGGCTGGGTACATTCATGAGGCCAGGAACACGGGATTGAATTCCAAGCAGAGCACCAGGATACCTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 90 bp | TGGCTCTTGCCTGGATTTCTGCTACAGGTATCCTGGTGCTCTGCTTaGAATTCAATCCCGTGTTCCTGGCCTCATGAATGTACCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: WLLPGFLLQVSWCSA*NSIPCSWPHECTQP Trigger: AGGCTGGGTACATTCATGAGGCCAGGAACACGGGATTGAATTCCAAGCAGAGCACCAGGATACCTGTAGCAGAAATCCAGGCAAGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS GCA 90 bp | CCATCTTCTTGGCTCTTGCCTGGATTTCTGCTACAGGTATCCTGGTaGTCTGCTTGGAATTCAATCCCGTGTTCCTGGCCTCATGAATGT | + |
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Preference number: 5 (lower is better) Translates to: PSSWLLPGFLLQVSW*SAWNSIPCSWPHEC Trigger: ACATTCATGAGGCCAGGAACACGGGATTGAATTCCAAGCAGAGCACCAGGATACCTGTAGCAGAAATCCAGGCAAGAGCCAAGAAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 90 bp | TTCCCATCTTCTTGGCTCTTGCCTGGATTTCTGCTACAGGTATCCTaGTGCTCTGCTTGGAATTCAATCCCGTGTTCCTGGCCTCATGAA | + |
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Preference number: 5 (lower is better) Translates to: FPSSWLLPGFLLQVS*CSAWNSIPCSWPHE Trigger: TTCATGAGGCCAGGAACACGGGATTGAATTCCAAGCAGAGCACCAGGATACCTGTAGCAGAAATCCAGGCAAGAGCCAAGAAGATGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 90 bp | CAGCAGACTAAAGGCAAGGCACCAGCCCTCTTTGAAGTTATACACTaGTCCAGCCAGGGAAATCACAAGCACACACACATACCCAACATC | + |
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Preference number: 5 (lower is better) Translates to: QQTKGKAPALFEVIH*SSQGNHKHTHIPNI Trigger: GATGTTGGGTATGTGTGTGTGCTTGTGATTTCCCTGGCTGGACCAGTGTATAACTTCAAAGAGGGCTGGTGCCTTGCCTTTAGTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS GCA 90 bp | ATAGCCTCAACTAAAAACAGTTGTTTGGACAAACTGTCAAACTCCTaGAGGGCCCACTTGACATCCGTCTTTGTCAGGTCAGTGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IASTKNSCLDKLSNS*RAHLTSVFVRSVRR Trigger: TCTCCTCACTGACCTGACAAAGACGGATGTCAAGTGGGCCCTGCAGGAGTTTGACAGTTTGTCCAAACAACTGTTTTTAGTTGAGGCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 90 bp | TCCTTCATGGGAATCCCACATACATGGCCAAAGAGATCTTACGTCTaGGAGCACAAACTGGGTATGTTAAAGGGCTTGATATTCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFMGIPHTWPKRSYV*EHKLGMLKGLIFSR Trigger: CCTGGAGAATATCAAGCCCTTTAACATACCCAGTTTGTGCTCCCAGACGTAAGATCTCTTTGGCCATGTATGTGGGATTCCCATGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS GCA 72 bp | TTAAGACTTTCCTCTCCTCCCACCACCCTACCCTACTaGCCGCTCTCCTGGAGGCCCAGGAGCCAATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRLSSPPTTLPY*PLSWRPRSQSS Trigger: AGAGGATTGGCTCCTGGGCCTCCAGGAGAGCGGGCAGTAGGGTAGGGTGGTGGGAGGAGAGGAAAGTCTTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 72 bp | GATGAGTTCAGGCAGCAGCGAGCGCGGAATGTGATGTaGTGGATCAAGCCCTGCTGCGGTGCACACTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: DEFRQQRARNVM*WIKPCCGAHCD Trigger: ATCGCAGTGTGCACCGCAGCAGGGCTTGATCCACCACATCACATTCCGCGCTCGCTGCTGCCTGAACTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS TCA 72 bp | ACTTTGATGAGTTCAGGCAGCAGCGAGCGCGGAATGTaGTGTGGTGGATCAAGCCCTGCTGCGGTGCACACT | + |
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Preference number: 6 (lower is better) Translates to: TLMSSGSSERGM*CGGSSPAAVHT Trigger: AGTGTGCACCGCAGCAGGGCTTGATCCACCACATCACATTCCGCGCTCGCTGCTGCCTGAACTCATCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS GCA 72 bp | CAAAGCTGGGTAGAGATTTGCACAGGTCCACGGAGCTaGTCAGCAAAGGGAGGGTCTGGAGGAGTGCTATCC | + |
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Preference number: 6 (lower is better) Translates to: QSWVEICTGPRS*SAKGGSGGVLS Trigger: GGATAGCACTCCTCCAGACCCTCCCTTTGCTGAGCAGCTCCGTGGACCTGTGCAAATCTCTACCCAGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 72 bp | CAGCACCAGAATAGTCCTCCTCAACACAGCTTTCACTaGGTCCACTTTGATGAGTTCAGGCAGCAGCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: QHQNSPPQHSFH*VHFDEFRQQRA Trigger: CGCTCGCTGCTGCCTGAACTCATCAAAGTGGACCCAGTGAAAGCTGTGTTGAGGAGGACTATTCTGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS GCA 72 bp | TGGCTCTTGCCTGGATTTCTGCTACAGGTATCCTGGTaGTCTGCTTGGAATTCAATCCCGTGTTCCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: WLLPGFLLQVSW*SAWNSIPCSWP Trigger: AGGCCAGGAACACGGGATTGAATTCCAAGCAGAGCACCAGGATACCTGTAGCAGAAATCCAGGCAAGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 72 bp | TCCTGGTGCTCTGCTTGGAATTCAATCCCGTGTTCCTaGCCTCATGAATGTACCCAGCCTCAGCACCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SWCSAWNSIPCS*PHECTQPQHQN Trigger: ATTCTGGTGCTGAGGCTGGGTACATTCATGAGGCCAGGAACACGGGATTGAATTCCAAGCAGAGCACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 72 bp | CGGGAGGCTCCGACTGAGAAGAACAAAGTAAATCCCTaGCAAGGGATTAAGACTTTCCTCTCCTCCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: REAPTEKNKVNP*QGIKTFLSSHH Trigger: GTGGTGGGAGGAGAGGAAAGTCTTAATCCCTTGCCAGGGATTTACTTTGTTCTTCTCAGTCGGAGCCTCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 90 bp | GGAGGAGTGCTATCCAGCAGACTAAAGGCAAGGCACCAGCCCTCTTaGAAGTTATACACTGGTCCAGCCAGGGAAATCACAAGCACACAC | + |
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Preference number: 6 (lower is better) Translates to: GGVLSSRLKARHQPS*KLYTGPAREITSTH Trigger: GTGTGTGCTTGTGATTTCCCTGGCTGGACCAGTGTATAACTTCAAAGAGGGCTGGTGCCTTGCCTTTAGTCTGCTGGATAGCACTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 72 bp | GCTTGCTATTCCGTTCCCATCTTCTTGGCTCTTGCCTaGATTTCTGCTACAGGTATCCTGGTGCTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ACYSVPIFLALA*ISATGILVLCL Trigger: CAAGCAGAGCACCAGGATACCTGTAGCAGAAATCCAGGCAAGAGCCAAGAAGATGGGAACGGAATAGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 72 bp | AGGGTATTTTGTTGTCCAACAAAGCTGGGTAGAGATTaGCACAGGTCCACGGAGCTGCTCAGCAAAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RVFCCPTKLGRD*HRSTELLSKGR Trigger: CCTCCCTTTGCTGAGCAGCTCCGTGGACCTGTGCAAATCTCTACCCAGCTTTGTTGGACAACAAAATACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 72 bp | CCTGGATTTCTGCTACAGGTATCCTGGTGCTCTGCTTaGAATTCAATCCCGTGTTCCTGGCCTCATGAATGT | + |
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Preference number: 6 (lower is better) Translates to: PGFLLQVSWCSA*NSIPCSWPHEC Trigger: ACATTCATGAGGCCAGGAACACGGGATTGAATTCCAAGCAGAGCACCAGGATACCTGTAGCAGAAATCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 72 bp | TGTTTGGACAAACTGTCAAACTCCTGCAGGGCCCACTaGACATCCGTCTTTGTCAGGTCAGTGAGGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: CLDKLSNSCRAH*TSVFVRSVRRM Trigger: CATTCTCCTCACTGACCTGACAAAGACGGATGTCAAGTGGGCCCTGCAGGAGTTTGACAGTTTGTCCAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 72 bp | CTATCCAGCAGACTAAAGGCAAGGCACCAGCCCTCTTaGAAGTTATACACTGGTCCAGCCAGGGAAATCACA | + |
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Preference number: 6 (lower is better) Translates to: LSSRLKARHQPS*KLYTGPAREIT Trigger: TGTGATTTCCCTGGCTGGACCAGTGTATAACTTCAAAGAGGGCTGGTGCCTTGCCTTTAGTCTGCTGGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 90 bp | TTGACATCCGTCTTTGTCAGGTCAGTGAGGAGAATGGCTATTACTTaGAAAAGGCTAAGGGTTTCTTGTTTCCTGCTGCTCCCGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: LTSVFVRSVRRMAIT*KRLRVSCFLLLPGD Trigger: ATCTCCCGGGAGCAGCAGGAAACAAGAAACCCTTAGCCTTTTCAAAGTAATAGCCATTCTCCTCACTGACCTGACAAAGACGGATGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CCA 72 bp | ATTAATTCAGCGCTTGCTATTCCGTTCCCATCTTCTTaGCTCTTGCCTGGATTTCTGCTACAGGTATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: INSALAIPFPSS*LLPGFLLQVSW Trigger: CCAGGATACCTGTAGCAGAAATCCAGGCAAGAGCCAAGAAGATGGGAACGGAATAGCAAGCGCTGAATTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 90 bp | TTAATTAATTCAGCGCTTGCTATTCCGTTCCCATCTTCTTGGCTCTaGCCTGGATTTCTGCTACAGGTATCCTGGTGCTCTGCTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LINSALAIPFPSSWL*PGFLLQVSWCSAWN Trigger: ATTCCAAGCAGAGCACCAGGATACCTGTAGCAGAAATCCAGGCAAGAGCCAAGAAGATGGGAACGGAATAGCAAGCGCTGAATTAATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 90 bp | AAAAACAGTTGTTTGGACAAACTGTCAAACTCCTGCAGGGCCCACTaGACATCCGTCTTTGTCAGGTCAGTGAGGAGAATGGCTATTACT | + |
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Preference number: 6 (lower is better) Translates to: KNSCLDKLSNSCRAH*TSVFVRSVRRMAIT Trigger: AGTAATAGCCATTCTCCTCACTGACCTGACAAAGACGGATGTCAAGTGGGCCCTGCAGGAGTTTGACAGTTTGTCCAAACAACTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS CAA 72 bp | GTCTTTGTCAGGTCAGTGAGGAGAATGGCTATTACTTaGAAAAGGCTAAGGGTTTCTTGTTTCCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VFVRSVRRMAIT*KRLRVSCFLLL Trigger: GAGCAGCAGGAAACAAGAAACCCTTAGCCTTTTCAAAGTAATAGCCATTCTCCTCACTGACCTGACAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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| CDS TCA 72 bp | ACAGGGGCAATCAAGAGTGGAAGTAGGTTGTCTAGTTaGTCAGCAATATGCTTTTCAGTATCTGTTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: TGAIKSGSRLSS*SAICFSVSVSQ Trigger: TTGGGAAACAGATACTGAAAAGCATATTGCTGATCAACTAGACAACCTACTTCCACTCTTGATTGCCCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582983.1 |
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