Pregenerated sensors for LINC02829 (Homo sapiens)
Ensembl gene IDs: ENSG00000227886, ENSG00000229274Ensembl transcript IDs: ENST00000412655.1, ENST00000416126.1, ENST00000416535.1, ENST00000427808.1, ENST00000436804.2, ENST00000439971.1, ENST00000453896.1, ENST00000455823.1, ENST00000661850.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAGCCATGGGGCTTAGGAGGCTGCTGATCAGGCTGTTCCAGGCCTaGAGGGGATCTGGTCAGGGTCTGCTCCTGAGCAGTTCATGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAMGLRRLLIRLFQA*RGSGQGLLLSSSCS Trigger: GGAGCATGAACTGCTCAGGAGCAGACCCTGACCAGATCCCCTGCAGGCCTGGAACAGCCTGATCAGCAGCCTCCTAAGCCCCATGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 ENST00000661850.1 |
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| CDS CCA 90 bp | TGCAGGGGATCTGGTCAGGGTCTGCTCCTGAGCAGTTCATGCTCCTaGGGCACCACGATCCCACCAGGCCAGCAGCAGGTTCTCACATCC | + |
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Preference number: 5 (lower is better) Translates to: CRGSGQGLLLSSSCS*GTTIPPGQQQVLTS Trigger: GGATGTGAGAACCTGCTGCTGGCCTGGTGGGATCGTGGTGCCCCAGGAGCATGAACTGCTCAGGAGCAGACCCTGACCAGATCCCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 ENST00000661850.1 |
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| CDS TCA 90 bp | GCTGGTGGTCTCATTCTTCGAAAAGTAGTGGCTGTCTTGGGGCACTaGTGGGCAGGCACCACCAGTTGGCACTGTCTGGCAGCTGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: AGGLILRKVVAVLGH*WAGTTSWHCLAAGN Trigger: GTTCCCAGCTGCCAGACAGTGCCAACTGGTGGTGCCTGCCCATCAGTGCCCCAAGACAGCCACTACTTTTCGAAGAATGAGACCACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 ENST00000661850.1 |
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| CDS GCA 90 bp | AAGGGTGCACTCCTTGTTCATCTCCAGGACGGTGTCAGCAAATGCTaGCTGGGGCATGCTGGTGATCACTGTGTCACTTTGGGTCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KGALLVHLQDGVSKC*LGHAGDHCVTLGQE Trigger: TTCCTGACCCAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCCTGGAGATGAACAAGGAGTGCACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS GCA 90 bp | ACTAAGGGTGCACTCCTTGTTCATCTCCAGGACGGTGTCAGCAAATaGTGCCTGGGGCATGCTGGTGATCACTGTGTCACTTTGGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: TKGALLVHLQDGVSK*CLGHAGDHCVTLGQ Trigger: CTGACCCAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCCTGGAGATGAACAAGGAGTGCACCCTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 90 bp | GTGCACTCCTTGTTCATCTCCAGGACGGTGTCAGCAAATGCTGCCTaGGGCATGCTGGTGATCACTGTGTCACTTTGGGTCAGGAAACAC | + |
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Preference number: 5 (lower is better) Translates to: VHSLFISRTVSANAA*GMLVITVSLWVRKH Trigger: GTGTTTCCTGACCCAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCCTGGAGATGAACAAGGAGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS TCA 90 bp | TCATCTCCAGGACGGTGTCAGCAAATGCTGCCTGGGGCATGCTGGTaGTCACTGTGTCACTTTGGGTCAGGAAACACATTCAGTAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SSPGRCQQMLPGACW*SLCHFGSGNTFSKL Trigger: CAGCTTACTGAATGTGTTTCCTGACCCAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCCTGGAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 90 bp | GGTCAGGAAACACATTCAGTAAGCTGGAGCTGGCCACAAAGCAGCTaGTGGTCTCATTCTTCGAAAAGTAGTGGCTGTCTTGGGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: GQETHSVSWSWPQSS*WSHSSKSSGCLGAL Trigger: CAGTGCCCCAAGACAGCCACTACTTTTCGAAGAATGAGACCACCAGCTGCTTTGTGGCCAGCTCCAGCTTACTGAATGTGTTTCCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 90 bp | CAGGAAACACATTCAGTAAGCTGGAGCTGGCCACAAAGCAGCTGGTaGTCTCATTCTTCGAAAAGTAGTGGCTGTCTTGGGGCACTGATG | + |
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Preference number: 5 (lower is better) Translates to: QETHSVSWSWPQSSW*SHSSKSSGCLGALM Trigger: CATCAGTGCCCCAAGACAGCCACTACTTTTCGAAGAATGAGACCACCAGCTGCTTTGTGGCCAGCTCCAGCTTACTGAATGTGTTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 90 bp | CTCTTTTGGCACAGTCCAGTCAAATGCCTGCTATTCTCCCATGTGTaGGTTCCTGTGTTCTGCCTCTTTCCGCATGGTCCACATCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LFWHSPVKCLLFSHV*VPVFCLFPHGPHQK Trigger: CTTCTGATGTGGACCATGCGGAAAGAGGCAGAACACAGGAACCCACACATGGGAGAATAGCAGGCATTTGACTGGACTGTGCCAAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CCA 90 bp | GCTATTCTCCCATGTGTGGGTTCCTGTGTTCTGCCTCTTTCCGCATaGTCCACATCAGAAGGAAGCAGTGAACAAGAAGCAGAAAATCTC | + |
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Preference number: 5 (lower is better) Translates to: AILPCVGSCVLPLSA*STSEGSSEQEAENL Trigger: GAGATTTTCTGCTTCTTGTTCACTGCTTCCTTCTGATGTGGACCATGCGGAAAGAGGCAGAACACAGGAACCCACACATGGGAGAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS GCA 90 bp | ATATTGTACTTGAACAACTCTTTTGGCACAGTCCAGTCAAATGCCTaGTATTCTCCCATGTGTGGGTTCCTGTGTTCTGCCTCTTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: ILYLNNSFGTVQSNA*YSPMCGFLCSASFR Trigger: GCGGAAAGAGGCAGAACACAGGAACCCACACATGGGAGAATAGCAGGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAAGTACAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS GCA 90 bp | CTTGATATTGTACTTGAACAACTCTTTTGGCACAGTCCAGTCAAATaGCTGCTATTCTCCCATGTGTGGGTTCCTGTGTTCTGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LDIVLEQLFWHSPVK*LLFSHVWVPVFCLF Trigger: AAAGAGGCAGAACACAGGAACCCACACATGGGAGAATAGCAGGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAAGTACAATATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CCA 90 bp | TTTGCAACTACAGTCTTGCTTGATATTGTACTTGAACAACTCTTTTaGCACAGTCCAGTCAAATGCCTGCTATTCTCCCATGTGTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: FATTVLLDIVLEQLF*HSPVKCLLFSHVWV Trigger: AACCCACACATGGGAGAATAGCAGGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CCA 72 bp | TCTGGTCAGGGTCTGCTCCTGAGCAGTTCATGCTCCTaGGGCACCACGATCCCACCAGGCCAGCAGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SGQGLLLSSSCS*GTTIPPGQQQV Trigger: AACCTGCTGCTGGCCTGGTGGGATCGTGGTGCCCCAGGAGCATGAACTGCTCAGGAGCAGACCCTGACCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 ENST00000661850.1 |
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| CDS GCA 72 bp | GCACTCCTTGTTCATCTCCAGGACGGTGTCAGCAAATaGTGCCTGGGGCATGCTGGTGATCACTGTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: ALLVHLQDGVSK*CLGHAGDHCVT Trigger: AGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCCTGGAGATGAACAAGGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS TCA 72 bp | GGACGGTGTCAGCAAATGCTGCCTGGGGCATGCTGGTaGTCACTGTGTCACTTTGGGTCAGGAAACACATTC | + |
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Preference number: 6 (lower is better) Translates to: GRCQQMLPGACW*SLCHFGSGNTF Trigger: GAATGTGTTTCCTGACCCAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS GCA 72 bp | CTCCTTGTTCATCTCCAGGACGGTGTCAGCAAATGCTaGCTGGGGCATGCTGGTGATCACTGTGTCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLVHLQDGVSKC*LGHAGDHCVTL Trigger: CAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCCTGGAGATGAACAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 72 bp | TTGTTCATCTCCAGGACGGTGTCAGCAAATGCTGCCTaGGGCATGCTGGTGATCACTGTGTCACTTTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LFISRTVSANAA*GMLVITVSLWV Trigger: GACCCAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCATTTGCTGACACCGTCCTGGAGATGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CAA 72 bp | TGCTGCCTGGGGCATGCTGGTGATCACTGTGTCACTTaGGGTCAGGAAACACATTCAGTAAGCTGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CCLGHAGDHCVT*GQETHSVSWSW Trigger: CCAGCTCCAGCTTACTGAATGTGTTTCCTGACCCAAAGTGACACAGTGATCACCAGCATGCCCCAGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 72 bp | TCACCAGTAAGCTGGAGCTGGCCACAAAGCAGCTGGTaGTCTCATTCTTCGAAAAGTAGTGGCTGTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SPVSWSWPQSSW*SHSSKSSGCLG Trigger: CCCAAGACAGCCACTACTTTTCGAAGAATGAGACCACCAGCTGCTTTGTGGCCAGCTCCAGCTTACTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CCA 72 bp | CACAGTCCAGTCAAATGCCTGCTATTCTCCCATGTGTaGGTTCCTGTGTTCTGCCTCTTTCCGCATGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: HSPVKCLLFSHV*VPVFCLFPHGP Trigger: TGGACCATGCGGAAAGAGGCAGAACACAGGAACCCACACATGGGAGAATAGCAGGCATTTGACTGGACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CCA 72 bp | CATTCAGTAAGCTGGAGCTGGCCACAAAGCAGCTGGTaGTCTCATTCTTCGAAAAGTAGTGGCTGTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HSVSWSWPQSSW*SHSSKSSGCLG Trigger: CCCAAGACAGCCACTACTTTTCGAAGAATGAGACCACCAGCTGCTTTGTGGCCAGCTCCAGCTTACTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 72 bp | TACTCACCAGTAAGCTGGAGCTGGCCACAAAGCAGCTaGTGGTCTCATTCTTCGAAAAGTAGTGGCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: YSPVSWSWPQSS*WSHSSKSSGCL Trigger: AAGACAGCCACTACTTTTCGAAGAATGAGACCACCAGCTGCTTTGTGGCCAGCTCCAGCTTACTGGTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS GCA 72 bp | TTGAACAACTCTTTTGGCACAGTCCAGTCAAATGCCTaGTATTCTCCCATGTGTGGGTTCCTGTGTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LNNSFGTVQSNA*YSPMCGFLCSA Trigger: GGCAGAACACAGGAACCCACACATGGGAGAATAGCAGGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CCA 72 bp | ACACATTCAGTAAGCTGGAGCTGGCCACAAAGCAGCTaGTGGTCTCATTCTTCGAAAAGTAGTGGCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: THSVSWSWPQSS*WSHSSKSSGCL Trigger: AAGACAGCCACTACTTTTCGAAGAATGAGACCACCAGCTGCTTTGTGGCCAGCTCCAGCTTACTGAATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS CCA 72 bp | ACTTTGGGTCAGGAAACACATTCAGTAAGCTGGAGCTaGCCACAAAGCAGCTGGTGGTCTCATTCTTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: TLGQETHSVSWS*PQSSWWSHSSK Trigger: TTTCGAAGAATGAGACCACCAGCTGCTTTGTGGCCAGCTCCAGCTTACTGAATGTGTTTCCTGACCCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412655.1 ENST00000416126.1 ENST00000416535.1 ENST00000427808.1 ENST00000436804.2 ENST00000439971.1 ENST00000453896.1 ENST00000455823.1 |
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| CDS GCA 72 bp | GTACTTGAACAACTCTTTTGGCACAGTCCAGTCAAATaGCTGCTATTCTCCCATGTGTGGGTTCCTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VLEQLFWHSPVK*LLFSHVWVPVF Trigger: GAACACAGGAACCCACACATGGGAGAATAGCAGGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CAA 90 bp | CAAGTTGTTGGTTATGTCTTTTTGCAACTACAGTCTTGCTTGATATaGTACTTGAACAACTCTTTTGGCACAGTCCAGTCAAATGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QVVGYVFLQLQSCLI*YLNNSFGTVQSNAC Trigger: GCAGGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAAAAGACATAACCAACAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CAA 72 bp | GTCTTTTTGCAACTACAGTCTTGCTTGATATTGTACTaGAACAACTCTTTTGGCACAGTCCAGTCAAATGCC | + |
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Preference number: 6 (lower is better) Translates to: VFLQLQSCLILY*NNSFGTVQSNA Trigger: GGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAAAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CAA 90 bp | GTTGGTTATGTCTTTTTGCAACTACAGTCTTGCTTGATATTGTACTaGAACAACTCTTTTGGCACAGTCCAGTCAAATGCCTGCTATTCT | + |
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Preference number: 6 (lower is better) Translates to: VGYVFLQLQSCLILY*NNSFGTVQSNACYS Trigger: AGAATAGCAGGCATTTGACTGGACTGTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAAAAGACATAACCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CAA 72 bp | GTTGTTGGTTATGTCTTTTTGCAACTACAGTCTTGCTaGATATTGTACTTGAACAACTCTTTTGGCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: VVGYVFLQLQSC*ILYLNNSFGTV Trigger: GACTGTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAAAAGACATAACCAACAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CAA 72 bp | CCAAGTTGTTGGTTATGTCTTTTTGCAACTACAGTCTaGCTTGATATTGTACTTGAACAACTCTTTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PSCWLCLFATTV*LDIVLEQLFWH Trigger: GTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAAAAGACATAACCAACAACTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS CAA 90 bp | AAATTGAAACCAAGTTGTTGGTTATGTCTTTTTGCAACTACAGTCTaGCTTGATATTGTACTTGAACAACTCTTTTGGCACAGTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: KLKPSCWLCLFATTV*LDIVLEQLFWHSPV Trigger: GACTGGACTGTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAAAAGACATAACCAACAACTTGGTTTCAATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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| CDS GCA 72 bp | CAAGTTGTTGGTTATGTCTTTTTGCAACTACAGTCTTaGTTGATATTGTACTTGAACAACTCTTTTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: QVVGYVFLQLQS*LILYLNNSFGT Trigger: TGTGCCAAAAGAGTTGTTCAAGTACAATATCAAGCAAGACTGTAGTTGCAAAAAGACATAACCAACAACTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661850.1 |
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