Pregenerated sensors for LINC02811 (Homo sapiens)
Ensembl gene IDs: ENSG00000284678Ensembl transcript IDs: ENST00000641026.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATACAGGTCAATGACTTTGTAGGTTGTCTTCAGTTTGGATTTGTCTaGTGTGTCCTCATGATTTATGCATCTCTGGCAGGAATACCACAG | + |
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Preference number: 5 (lower is better) Translates to: IQVNDFVGCLQFGFV*CVLMIYASLAGIPQ Trigger: CTGTGGTATTCCTGCCAGAGATGCATAAATCATGAGGACACAGCAGACAAATCCAAACTGAAGACAACCTACAAAGTCATTGACCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641026.1 |
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| CDS CAA 90 bp | GCTAAGATGATGTCTGCCAGGTTTCTCCACTGTTTTGGAAAATTCTaGGCCGTGCTCTTCAACTTATCACTTCTGCCTCATTTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AKMMSARFLHCFGKF*AVLFNLSLLPHFCP Trigger: AGGACAGAAATGAGGCAGAAGTGATAAGTTGAAGAGCACGGCCAAGAATTTTCCAAAACAGTGGAGAAACCTGGCAGACATCATCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641026.1 |
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| CDS GCA 72 bp | CCAGGTTTCTCCACTGTTTTGGAAAATTCTTGGCCGTaGTCTTCAACTTATCACTTCTGCCTCATTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGFSTVLENSWP*SSTYHFCLISV Trigger: GACAGAAATGAGGCAGAAGTGATAAGTTGAAGAGCACGGCCAAGAATTTTCCAAAACAGTGGAGAAACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641026.1 |
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| CDS CCA 72 bp | TGTCTGCCAGGTTTCTCCACTGTTTTGGAAAATTCTTaGCCGTGCTCTTCAACTTATCACTTCTGCCTCATT | + |
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Preference number: 6 (lower is better) Translates to: CLPGFSTVLENS*PCSSTYHFCLI Trigger: AATGAGGCAGAAGTGATAAGTTGAAGAGCACGGCCAAGAATTTTCCAAAACAGTGGAGAAACCTGGCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641026.1 |
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| CDS GCA 72 bp | AATGACTTTGTAGGTTGTCTTCAGTTTGGATTTGTCTaGTGTGTCCTCATGATTTATGCATCTCTGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: NDFVGCLQFGFV*CVLMIYASLAG Trigger: TCCTGCCAGAGATGCATAAATCATGAGGACACAGCAGACAAATCCAAACTGAAGACAACCTACAAAGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641026.1 |
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