Pregenerated sensors for LINC02808 (Homo sapiens)
Ensembl gene IDs: ENSG00000284696Ensembl transcript IDs: ENST00000641180.1, ENST00000641188.1, ENST00000641192.1, ENST00000641628.1, ENST00000641749.1, ENST00000641951.1, ENST00000641957.1, ENST00000642061.1, ENST00000661441.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCCCTTCCCTGGGTGAGGAGAGGCCCTCCAGGGCCCATCTTGGCTaGCTGGCTCCACACCTGGATCCTCAGCCAACAGGGAAGGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: SPSLGEERPSRAHLG*LAPHLDPQPTGKGS Trigger: ACTTCCCTTCCCTGTTGGCTGAGGATCCAGGTGTGGAGCCAGTCAGCCAAGATGGGCCCTGGAGGGCCTCTCCTCACCCAGGGAAGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642061.1 |
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| CDS CCA 90 bp | CTTCCCTGGGTGAGGAGAGGCCCTCCAGGGCCCATCTTGGCTGACTaGCTCCACACCTGGATCCTCAGCCAACAGGGAAGGGAAGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: LPWVRRGPPGPILAD*LHTWILSQQGREVD Trigger: GTCAACTTCCCTTCCCTGTTGGCTGAGGATCCAGGTGTGGAGCCAGTCAGCCAAGATGGGCCCTGGAGGGCCTCTCCTCACCCAGGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642061.1 |
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| CDS CCA 90 bp | AGGAGAGGCCCTCCAGGGCCCATCTTGGCTGACTGGCTCCACACCTaGATCCTCAGCCAACAGGGAAGGGAAGTTGACCTTGGAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: RRGPPGPILADWLHT*ILSQQGREVDLGVT Trigger: TGTGACTCCAAGGTCAACTTCCCTTCCCTGTTGGCTGAGGATCCAGGTGTGGAGCCAGTCAGCCAAGATGGGCCCTGGAGGGCCTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642061.1 |
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| CDS CCA 90 bp | GGCAGCTCTAAGAAGGTCTCCCCCACCAGCACATCTGTGGGGACTTaGCCAGAGTGGGTGAAGCTGCTGGAGCAACAGCAGCTTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GSSKKVSPTSTSVGT*PEWVKLLEQQQLPP Trigger: AGGAGGAAGCTGCTGTTGCTCCAGCAGCTTCACCCACTCTGGCCAAGTCCCCACAGATGTGCTGGTGGGGGAGACCTTCTTAGAGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS TCA 90 bp | GAGAGAAGCAGCTTGGGGAGTGCAAAGGGCACCAGCTCAGTTGGATaGCCCTGGGCAAGTGACTCCATTCTCTTGAGCCAGGGATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ERSSLGSAKGTSSVG*PWASDSILLSQGFL Trigger: GAGGAATCCCTGGCTCAAGAGAATGGAGTCACTTGCCCAGGGTCATCCAACTGAGCTGGTGCCCTTTGCACTCCCCAAGCTGCTTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS TCA 90 bp | TTGGCCAGAGTGGGTGAAGCTGCTGGAGCAACAGCAGCTTCCTCCTaGCCTTCTGCCTCTGCATGTTCCCCTGACTCACTGATGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: LARVGEAAGATAASS*PSASACSPDSLMEN Trigger: GTTTTCCATCAGTGAGTCAGGGGAACATGCAGAGGCAGAAGGTCAGGAGGAAGCTGCTGTTGCTCCAGCAGCTTCACCCACTCTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS TCA 90 bp | AGCAACAGCAGCTTCCTCCTGACCTTCTGCCTCTGCATGTTCCCCTaGCTCACTGATGGAAAACATCCACCCTTCTGGGCCTCTTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: SNSSFLLTFCLCMFP*LTDGKHPPFWASSL Trigger: TAAGGAAGAGGCCCAGAAGGGTGGATGTTTTCCATCAGTGAGTCAGGGGAACATGCAGAGGCAGAAGGTCAGGAGGAAGCTGCTGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS CCA 90 bp | GAGACCAGAGAAAGTAATTCCTATCCCAGCTCAGTCACTGACCAGTaGCCTCAGGCAAATCCATTCACCTCCCTGAGCCTCCCCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: ETRESNSYPSSVTDQ*PQANPFTSLSLPIS Trigger: AGAGATGGGGAGGCTCAGGGAGGTGAATGGATTTGCCTGAGGCCACTGGTCAGTGACTGAGCTGGGATAGGAATTACTTTCTCTGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS TCA 90 bp | GCTCAGTCACTGACCAGTGGCCTCAGGCAAATCCATTCACCTCCCTaGGCCTCCCCATCTCTCCTTATCTGGAAAGTGAGTGGTAACAAT | + |
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Preference number: 5 (lower is better) Translates to: AQSLTSGLRQIHSPP*ASPSLLIWKVSGNN Trigger: ATTGTTACCACTCACTTTCCAGATAAGGAGAGATGGGGAGGCTCAGGGAGGTGAATGGATTTGCCTGAGGCCACTGGTCAGTGACTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS TCA 90 bp | GCAGCAAACATTCAGCCTTCTCTCGTCACGGCACGTTCCTCCTTCTaGGGTCATCTAGCAAGGAAGTGTCTGAGCTGGTATTTGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: AANIQPSLVTARSSF*GHLARKCLSWYLNS Trigger: GGAGTTCAAATACCAGCTCAGACACTTCCTTGCTAGATGACCTCAGAAGGAGGAACGTGCCGTGACGAGAGAAGGCTGAATGTTTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS TCA 90 bp | TCCATTCACCTCCCTGAGCCTCCCCATCTCTCCTTATCTGGAAAGTaGGTGGTAACAATGACACATGCTTCACAGGGTGATGGGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: SIHLPEPPHLSLSGK*VVTMTHASQGDGSM Trigger: CATGCTCCCATCACCCTGTGAAGCATGTGTCATTGTTACCACTCACTTTCCAGATAAGGAGAGATGGGGAGGCTCAGGGAGGTGAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS TCA 90 bp | ACATTGTCTCCCGGGCCCCAGCACCCACATTCCAACTCAATTACATaGTTTGTTTTTGGGTCTGGCCAGACGCAGAAGCAACTGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: TLSPGPQHPHSNSIT*FVFGSGQTQKQLRC Trigger: GCATCTCAGTTGCTTCTGCGTCTGGCCAGACCCAAAAACAAATCATGTAATTGAGTTGGAATGTGGGTGCTGGGGCCCGGGAGACAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS TCA 90 bp | CAGCTTCCTCCTGACCTTCTGCCTCTGCATGTTCCCCTGACTCACTaGTGGAAAACATCCACCCTTCTGGGCCTCTTCCTTATTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: QLPPDLLPLHVPLTH*WKTSTLLGLFLISS Trigger: TGATGAAATAAGGAAGAGGCCCAGAAGGGTGGATGTTTTCCATCAGTGAGTCAGGGGAACATGCAGAGGCAGAAGGTCAGGAGGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS CCA 90 bp | CTCTTGAGCCAGGGATTCCTCTCTCTTAAGAACTGGAGAAACTTCTaGACCTTCACTGCCAATGCACAACCATCACCGCCACCAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LLSQGFLSLKNWRNF*TFTANAQPSPPPSF Trigger: GAAGCTTGGTGGCGGTGATGGTTGTGCATTGGCAGTGAAGGTCCAGAAGTTTCTCCAGTTCTTAAGAGAGAGGAATCCCTGGCTCAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CCA 90 bp | CGGGCCCCAGCACCCACATTCCAACTCAATTACATGATTTGTTTTTaGGTCTGGCCAGACGCAGAAGCAACTGAGATGCAGCAGAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: RAPAPTFQLNYMICF*VWPDAEATEMQQKE Trigger: CTCTTTCTGCTGCATCTCAGTTGCTTCTGCGTCTGGCCAGACCCAAAAACAAATCATGTAATTGAGTTGGAATGTGGGTGCTGGGGCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS CCA 90 bp | CTGGGTGTCACTGGAAATCTCATCTGCACATCCACCTTGGAATTCTaGGATATCAGCAGTCTTTCTACAGTGGGGCTCCAAGAACACCTG | + |
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Preference number: 5 (lower is better) Translates to: LGVTGNLICTSTLEF*DISSLSTVGLQEHL Trigger: CAGGTGTTCTTGGAGCCCCACTGTAGAAAGACTGCTGATATCCCAGAATTCCAAGGTGGATGTGCAGATGAGATTTCCAGTGACACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CCA 90 bp | GAAGTCTGCTGGGTGTCACTGGAAATCTCATCTGCACATCCACCTTaGAATTCTGGGATATCAGCAGTCTTTCTACAGTGGGGCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: EVCWVSLEISSAHPP*NSGISAVFLQWGSK Trigger: CTTGGAGCCCCACTGTAGAAAGACTGCTGATATCCCAGAATTCCAAGGTGGATGTGCAGATGAGATTTCCAGTGACACCCAGCAGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS TCA 90 bp | GGCCAAAGCAAGTCACAAAGCCAGCCTGAAATGCACTCCACCTCATaGTGGGAGAATTTGCAAAGTGCTGTGGCAATTTTCCCAATATGC | + |
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Preference number: 5 (lower is better) Translates to: GQSKSQSQPEMHSTS*WENLQSAVAIFPIC Trigger: GCATATTGGGAAAATTGCCACAGCACTTTGCAAATTCTCCCATCATGAGGTGGAGTGCATTTCAGGCTGGCTTTGTGACTTGCTTTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS GCA 90 bp | GTACTCAGTCTGTTACATCTGGCTCTCTCTCATGTACAGATTATGTaGCCTTGGGTAGGTCTTTTCCCTCAAGTGGCCCCATCTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: VLSLLHLALSHVQIM*PWVGLFPQVAPSLL Trigger: TAGAAGAGATGGGGCCACTTGAGGGAAAAGACCTACCCAAGGGCACATAATCTGTACATGAGAGAGAGCCAGATGTAACAGACTGAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641188.1 ENST00000641192.1 |
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| CDS TCA 90 bp | ACGCAGAAGCAACTGAGATGCAGCAGAAAGAGTGAGACAAAGAGGTaGGATCAAGAGACCAGAGAAAGTAATTCCTATCCCAGCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: TQKQLRCSRKSETKR*DQETRESNSYPSSV Trigger: GACTGAGCTGGGATAGGAATTACTTTCTCTGGTCTCTTGATCTCACCTCTTTGTCTCACTCTTTCTGCTGCATCTCAGTTGCTTCTGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS TCA 90 bp | TCCAGGGCCCAGTTATTCCTCCCTCTTCTAATCCTGGCTACTACATaGAGTAGATGCTTCTATTCTCCCCAATTTAGAGATGAAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: SRAQLFLPLLILATT*SRCFYSPQFRDEMQ Trigger: CTGCATTTCATCTCTAAATTGGGGAGAATAGAAGCATCTACTTCATGTAGTAGCCAGGATTAGAAGAGGGAGGAATAACTGGGCCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641628.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS CCA 90 bp | TTAGAGATGAAATGCAGAGGATTAGGTCACTTGCCCAAGTTCACATaGCTAGTAAGTGGCAAAGTTAGGATTTCACCTTGGGAAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: LEMKCRGLGHLPKFT*LVSGKVRISPWEDW Trigger: CCAGTCTTCCCAAGGTGAAATCCTAACTTTGCCACTTACTAGCCATGTGAACTTGGGCAAGTGACCTAATCCTCTGCATTTCATCTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641749.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS CCA 90 bp | TATTTGAACTCCTCCATGGTTCTAAAGAATGATGAAAAAGTACGATaGGGCATGAGGGAAGCCACCTTTCCTGTCAGAGGTTCCATTGTG | + |
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Preference number: 5 (lower is better) Translates to: YLNSSMVLKNDEKVR*GMREATFPVRGSIV Trigger: CACAATGGAACCTCTGACAGGAAAGGTGGCTTCCCTCATGCCCCATCGTACTTTTTCATCATTCTTTAGAACCATGGAGGAGTTCAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CCA 90 bp | TATACATTCATCACATTCTATCCAGGGCCCAGTTATTCCTCCCAATaGGGTGGAAAGATTCACAGTCTGTTTAACCCCAAGTCCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: YTFITFYPGPSYSSQ*GGKIHSLFNPKSST Trigger: AGTACTGGACTTGGGGTTAAACAGACTGTGAATCTTTCCACCCCATTGGGAGGAATAACTGGGCCCTGGATAGAATGTGATGAATGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641188.1 |
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| CDS TCA 90 bp | TCTGCTGGAAAATATAGCCTAGCCATGTATCCTGTCACTCTGATCTaGGGCACAGCTCTCAACCACAAATTATTTCCACTTCTCATTAAG | + |
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Preference number: 5 (lower is better) Translates to: SAGKYSLAMYPVTLI*GTALNHKLFPLLIK Trigger: CTTAATGAGAAGTGGAAATAATTTGTGGTTGAGAGCTGTGCCTCAGATCAGAGTGACAGGATACATGGCTAGGCTATATTTTCCAGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000641188.1 ENST00000641628.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS TCA 90 bp | AGCCAGAGTGCTCTTACGTTTAGTAGATGTTCAGTTGATGTTTGTTaGGAAAACCAACTTACAAAGGCAGTGCTGATCTCATCACCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SQSALTFSRCSVDVC*ENQLTKAVLISSPR Trigger: CCTTGGTGATGAGATCAGCACTGCCTTTGTAAGTTGGTTTTCTCAACAAACATCAACTGAACATCTACTAAACGTAAGAGCACTCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS GCA 90 bp | CTACATGAAGTAGATGCTTCTATTCTCCCCAATTTAGAGATGAAATaGAGAGGATTAGGTCACTTGCCCAAGTTCACATGGCTAGTAAGT | + |
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Preference number: 5 (lower is better) Translates to: LHEVDASILPNLEMK*RGLGHLPKFTWLVS Trigger: ACTTACTAGCCATGTGAACTTGGGCAAGTGACCTAATCCTCTGCATTTCATCTCTAAATTGGGGAGAATAGAAGCATCTACTTCATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000641180.1 ENST00000641749.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS CCA 90 bp | CTGAAATGCACTCCACCTCATGATGGGAGAATTTGCAAAGTGCTGTaGCAATTTTCCCAATATGCTTCAAGGTGTATAAACTTTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LKCTPPHDGRICKVL*QFSQYASRCINFLP Trigger: TGGAAGAAAGTTTATACACCTTGAAGCATATTGGGAAAATTGCCACAGCACTTTGCAAATTCTCCCATCATGAGGTGGAGTGCATTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS TCA 72 bp | CTGGGTGAGGAGAGGCCCTCCAGGGCCCATCTTGGCTaGCTGGCTCCACACCTGGATCCTCAGCCAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: LGEERPSRAHLG*LAPHLDPQPTG Trigger: CCCTGTTGGCTGAGGATCCAGGTGTGGAGCCAGTCAGCCAAGATGGGCCCTGGAGGGCCTCTCCTCACCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642061.1 |
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| CDS CAA 90 bp | ACCACTCCCCTTCCCTGGGTGAGGAGAGGCCCTCCAGGGCCCATCTaGGCTGACTGGCTCCACACCTGGATCCTCAGCCAACAGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: TTPLPWVRRGPPGPI*ADWLHTWILSQQGR Trigger: CCTTCCCTGTTGGCTGAGGATCCAGGTGTGGAGCCAGTCAGCCAAGATGGGCCCTGGAGGGCCTCTCCTCACCCAGGGAAGGGGAGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642061.1 |
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| CDS CCA 72 bp | GTGAGGAGAGGCCCTCCAGGGCCCATCTTGGCTGACTaGCTCCACACCTGGATCCTCAGCCAACAGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VRRGPPGPILAD*LHTWILSQQGR Trigger: CCTTCCCTGTTGGCTGAGGATCCAGGTGTGGAGCCAGTCAGCCAAGATGGGCCCTGGAGGGCCTCTCCTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642061.1 |
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| CDS CCA 72 bp | CCTCCAGGGCCCATCTTGGCTGACTGGCTCCACACCTaGATCCTCAGCCAACAGGGAAGGGAAGTTGACCTT | + |
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Preference number: 6 (lower is better) Translates to: PPGPILADWLHT*ILSQQGREVDL Trigger: AAGGTCAACTTCCCTTCCCTGTTGGCTGAGGATCCAGGTGTGGAGCCAGTCAGCCAAGATGGGCCCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642061.1 |
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| CDS TCA 72 bp | AGCTTGGGGAGTGCAAAGGGCACCAGCTCAGTTGGATaGCCCTGGGCAAGTGACTCCATTCTCTTGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLGSAKGTSSVG*PWASDSILLSQ Trigger: CTGGCTCAAGAGAATGGAGTCACTTGCCCAGGGTCATCCAACTGAGCTGGTGCCCTTTGCACTCCCCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS TCA 72 bp | AAAGGGCACCAGCTCAGTTGGATGACCCTGGGCAAGTaGCTCCATTCTCTTGAGCCAGGGATTCCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KGHQLSWMTLGK*LHSLEPGIPLS Trigger: AGAGAGAGGAATCCCTGGCTCAAGAGAATGGAGTCACTTGCCCAGGGTCATCCAACTGAGCTGGTGCCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS TCA 72 bp | CTGACCAGTGGCCTCAGGCAAATCCATTCACCTCCCTaGGCCTCCCCATCTCTCCTTATCTGGAAAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LTSGLRQIHSPP*ASPSLLIWKVS Trigger: ACTCACTTTCCAGATAAGGAGAGATGGGGAGGCTCAGGGAGGTGAATGGATTTGCCTGAGGCCACTGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS GCA 72 bp | TGTTGGTGGTGGTGTTGCTGCTGCTGCTGCTGCTGCTaGTGTTTTCAGTTGACAGCCAGAGTGCTAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: CWWWCCCCCCCC*CFQLTARVLKA Trigger: TGCCTTTAGCACTCTGGCTGTCAACTGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAACACCACCACCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641951.1 |
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| CDS GCA 72 bp | GTGCTGGCCGTGGTCCTGAATCTTCTGCGTGAAGTCTaGTGGGTGTCACTGGAAATCTCATCTGCACATCCA | + |
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Preference number: 6 (lower is better) Translates to: VLAVVLNLLREV*WVSLEISSAHP Trigger: TGGATGTGCAGATGAGATTTCCAGTGACACCCAGCAGACTTCACGCAGAAGATTCAGGACCACGGCCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS TCA 72 bp | GTTGCTGCTGCTGCTGCTGCTGCTGCTGTTTTCAGTTaGCAGCCAGAGTGCTCTCTTCTAATCCTGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: VAAAAAAAAVFS*QPECSLLILAT Trigger: AGTAGCCAGGATTAGAAGAGAGCACTCTGGCTGTCAACTGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS CAA 72 bp | TGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTTTCAGTaGACAGCCAGAGTGCTAAAGGCAGTGCTGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCFQ*TARVLKAVLIS Trigger: TGAGATCAGCACTGCCTTTAGCACTCTGGCTGTCAACTGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641951.1 |
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| CDS CAA 72 bp | CTCTGCGACCCAGCCAAGCTGCAGCTAGACCCAGTATaGGTGCAGCATGTAAAAAGCTCTTCTAATCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LCDPAKLQLDPV*VQHVKSSSNPG Trigger: GCCAGGATTAGAAGAGCTTTTTACATGCTGCACCAATACTGGGTCTAGCTGCAGCTTGGCTGGGTCGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CAA 90 bp | CTCTTCAGCCTCTGCGACCCAGCCAAGCTGCAGCTAGACCCAGTATaGGTGCAGCATGTAAAAAGCTCTTCTAATCCTGGCTACTACATG | + |
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Preference number: 6 (lower is better) Translates to: LFSLCDPAKLQLDPV*VQHVKSSSNPGYYM Trigger: CATGTAGTAGCCAGGATTAGAAGAGCTTTTTACATGCTGCACCAATACTGGGTCTAGCTGCAGCTTGGCTGGGTCGCAGAGGCTGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CAA 72 bp | GCCTCAAAGTCTGCATTATTACCGTGGTCACCACCTTaGAGCAGCTCTCACTTCCTCCAGAGGCAGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: ASKSALLPWSPP*SSSHFLQRQQT Trigger: TGTTTGCTGCCTCTGGAGGAAGTGAGAGCTGCTCAAAGGTGGTGACCACGGTAATAATGCAGACTTTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS GCA 72 bp | CTGTTACATCTGGCTCTCTCTCATGTACAGATTATGTaGCCTTGGGTAGGTCTTTTCCCTCAAGTGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLHLALSHVQIM*PWVGLFPQVAP Trigger: TGGGGCCACTTGAGGGAAAAGACCTACCCAAGGGCACATAATCTGTACATGAGAGAGAGCCAGATGTAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641188.1 ENST00000641192.1 |
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| CDS CCA 72 bp | CAGGGATTCCTCTCTCTTAAGAACTGGAGAAACTTCTaGACCTTCACTGCCAATGCACAACCATCACCGCCA | + |
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Preference number: 6 (lower is better) Translates to: QGFLSLKNWRNF*TFTANAQPSPP Trigger: TGGCGGTGATGGTTGTGCATTGGCAGTGAAGGTCCAGAAGTTTCTCCAGTTCTTAAGAGAGAGGAATCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CAA 72 bp | ACATCTGGCTCTCTCTCATGTACAGATTATGTGCCCTaGGGTAGGTCTTTTCCCTCAAGTGGCCCCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: TSGSLSCTDYVP*GRSFPSSGPIS Trigger: AGAGATGGGGCCACTTGAGGGAAAAGACCTACCCAAGGGCACATAATCTGTACATGAGAGAGAGCCAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641188.1 ENST00000641192.1 |
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| CDS CAA 90 bp | CTTCAGTTATATATGCAACAGTTGTCGTTGTTGTTGGTGGTGGTGTaGCTGCTGCTGCTGCTGCTGCTGCTGTTTTCAGTTGACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LQLYMQQLSLLLVVV*LLLLLLLLFSVDSQ Trigger: CTGGCTGTCAACTGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAACACCACCACCAACAACAACGACAACTGTTGCATATATAACTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641180.1 ENST00000641749.1 ENST00000641951.1 |
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| CDS CAA 90 bp | CCAATGCACAACCATCACCGCCACCAAGCTTCAGCAATCTCTCCCTaGGACAGCTACCTGCCAGTGTCATTTATATTATTGGCCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PMHNHHRHQASAISP*DSYLPVSFILLAKA Trigger: TGCTTTGGCCAATAATATAAATGACACTGGCAGGTAGCTGTCCAAGGGAGAGATTGCTGAAGCTTGGTGGCGGTGATGGTTGTGCATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS GCA 72 bp | ACTGATGCTTTCCCACTCAACACCTGTTTTAATTCCTaGAACAACAGTCTGAGGGAGAGGAGATCAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TDAFPLNTCFNS*NNSLRERRSAP Trigger: TGGGGCTGATCTCCTCTCCCTCAGACTGTTGTTGCAGGAATTAAAACAGGTGTTGAGTGGGAAAGCATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641957.1 ENST00000661441.1 |
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| CDS CAA 72 bp | TATATGCAACAGTTGTCGTTGTTGTTGGTGGTGGTGTaGCTGCTGCTGCTGCTGCTGCTGCTGTTTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: YMQQLSLLLVVV*LLLLLLLLFSV Trigger: AACTGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAACACCACCACCAACAACAACGACAACTGTTGCATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641180.1 ENST00000641749.1 ENST00000641951.1 |
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| CDS CAA 72 bp | TGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTTTCAGTaGACAGCCAGAGTGCTCTTACGTTTAGTAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCFQ*TARVLLRLVDV Trigger: AACATCTACTAAACGTAAGAGCACTCTGGCTGTCAACTGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CAA 90 bp | CAGTCTGTTACATCTGGCTCTCTCTCATGTACAGATTATGTGCCCTaGGGTAGGTCTTTTCCCTCAAGTGGCCCCATCTCTTCTAATCCT | + |
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Preference number: 6 (lower is better) Translates to: QSVTSGSLSCTDYVP*GRSFPSSGPISSNP Trigger: AGGATTAGAAGAGATGGGGCCACTTGAGGGAAAAGACCTACCCAAGGGCACATAATCTGTACATGAGAGAGAGCCAGATGTAACAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641188.1 ENST00000641192.1 |
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| CDS CCA 72 bp | TCCTCCATGGTTCTAAAGAATGATGAAAAAGTACGATaGGGCATGAGGGAAGCCACCTTTCCTGTCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSMVLKNDEKVR*GMREATFPVRG Trigger: ACCTCTGACAGGAAAGGTGGCTTCCCTCATGCCCCATCGTACTTTTTCATCATTCTTTAGAACCATGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CCA 72 bp | ATCACATTCTATCCAGGGCCCAGTTATTCCTCCCAATaGGGTGGAAAGATTCACAGTCTGTTTAACCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: ITFYPGPSYSSQ*GGKIHSLFNPK Trigger: CTTGGGGTTAAACAGACTGTGAATCTTTCCACCCCATTGGGAGGAATAACTGGGCCCTGGATAGAATGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641188.1 |
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| CDS CAA 72 bp | CCCTTGGACAGCTACCTGCCAGTGTCATTTATATTATaGGCCAAAGCAAGTCACAAAGCCAGCCTGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: PLDSYLPVSFIL*AKASHKASLKC Trigger: GCATTTCAGGCTGGCTTTGTGACTTGCTTTGGCCAATAATATAAATGACACTGGCAGGTAGCTGTCCAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CAA 72 bp | AACCATCACCGCCACCAAGCTTCAGCAATCTCTCCCTaGGACAGCTACCTGCCAGTGTCATTTATATTATTG | + |
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Preference number: 6 (lower is better) Translates to: NHHRHQASAISP*DSYLPVSFILL Trigger: CAATAATATAAATGACACTGGCAGGTAGCTGTCCAAGGGAGAGATTGCTGAAGCTTGGTGGCGGTGATGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CAA 90 bp | TTCCAGGCCACCTTCCTTCACTCCATCCCATGGTTTCTTGTTTCCTaGAAGGCTACGAACTCTTCACCTTTGATACAGAACAAGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: FQATFLHSIPWFLVS*KATNSSPLIQNKNK Trigger: TTTGTTCTTGTTCTGTATCAAAGGTGAAGAGTTCGTAGCCTTCAAGGAAACAAGAAACCATGGGATGGAGTGAAGGAAGGTGGCCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000641188.1 ENST00000641628.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS CAA 72 bp | ACCTTCCTTCACTCCATCCCATGGTTTCTTGTTTCCTaGAAGGCTACGAACTCTTCACCTTTGATACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: TFLHSIPWFLVS*KATNSSPLIQN Trigger: GTTCTGTATCAAAGGTGAAGAGTTCGTAGCCTTCAAGGAAACAAGAAACCATGGGATGGAGTGAAGGAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000641188.1 ENST00000641628.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS CAA 90 bp | ATCCCATGGTTTCTTGTTTCCTTGAAGGCTACGAACTCTTCACCTTaGATACAGAACAAGAACAAATTCCTGGAAGTCCTCTGCTACACC | + |
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Preference number: 6 (lower is better) Translates to: IPWFLVSLKATNSSP*IQNKNKFLEVLCYT Trigger: GGTGTAGCAGAGGACTTCCAGGAATTTGTTCTTGTTCTGTATCAAAGGTGAAGAGTTCGTAGCCTTCAAGGAAACAAGAAACCATGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000641188.1 ENST00000641628.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS TCA 72 bp | CAGCCAGAGTGCTCTCTTCTAATCCTGGCTACTACATaGAGTAGATGCTTCTATTCTCCCCAATTTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: QPECSLLILATT*SRCFYSPQFRD Trigger: ATCTCTAAATTGGGGAGAATAGAAGCATCTACTTCATGTAGTAGCCAGGATTAGAAGAGAGCACTCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641180.1 |
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| CDS GCA 72 bp | AATGCACTCCACCTCATGATGGGAGAATTTGCAAAGTaGTGTGGCAATTTTCCCAATATGCTTCAAGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: NALHLMMGEFAK*CGNFPNMLQGV Trigger: TACACCTTGAAGCATATTGGGAAAATTGCCACAGCACTTTGCAAATTCTCCCATCATGAGGTGGAGTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS CAA 72 bp | CCCAATTTAGAGATGAAATGCAGAGGATTAGGTCACTaGCCCAAGTTCACATGGCTAGTAAGTGGCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PNLEMKCRGLGH*PKFTWLVSGKV Trigger: AACTTTGCCACTTACTAGCCATGTGAACTTGGGCAAGTGACCTAATCCTCTGCATTTCATCTCTAAATTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641749.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS TCA 72 bp | AAATATAGCCTAGCCATGTATCCTGTCACTCTGATCTaGGGCACAGCTCTCAACCACAAATTATTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: KYSLAMYPVTLI*GTALNHKLFPL Trigger: AAGTGGAAATAATTTGTGGTTGAGAGCTGTGCCTCAGATCAGAGTGACAGGATACATGGCTAGGCTATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000641188.1 ENST00000641628.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS CCA 72 bp | ACTCCACCTCATGATGGGAGAATTTGCAAAGTGCTGTaGCAATTTTCCCAATATGCTTCAAGGTGTATAAAC | + |
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Preference number: 6 (lower is better) Translates to: TPPHDGRICKVL*QFSQYASRCIN Trigger: GTTTATACACCTTGAAGCATATTGGGAAAATTGCCACAGCACTTTGCAAATTCTCCCATCATGAGGTGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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| CDS GCA 72 bp | CATCTACTCATCTCAGACACTGTGTTAGAAAAGGTGTaGTCATGTTCTTGTTTAATCCCCTATGAGGAGATT | + |
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Preference number: 6 (lower is better) Translates to: HLLISDTVLEKV*SCSCLIPYEEI Trigger: AATCTCCTCATAGGGGATTAAACAAGAACATGAGCACACCTTTTCTAACACAGTGTCTGAGATGAGTAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641192.1 |
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| CDS CAA 72 bp | TTTCTTGTTTCCTTGAAGGCTACGAACTCTTCACCTTaGATACAGAACAAGAACAAATTCCTGGAAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FLVSLKATNSSP*IQNKNKFLEVL Trigger: GAGGACTTCCAGGAATTTGTTCTTGTTCTGTATCAAAGGTGAAGAGTTCGTAGCCTTCAAGGAAACAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000641188.1 ENST00000641628.1 ENST00000641957.1 ENST00000661441.1 |
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| CDS TCA 72 bp | GAGCCAAAGAGCAAAGAAGCAAATGAACCCCTATTTTaGACATCTACTCATCTCAGACACTGTGTTAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: EPKSKEANEPLF*TSTHLRHCVRK Trigger: TTTTCTAACACAGTGTCTGAGATGAGTAGATGTTCAAAATAGGGGTTCATTTGCTTCTTTGCTCTTTGGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641192.1 |
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| CDS CAA 72 bp | GAGATTATTAAGACTTCCATCTTAAAGATGAGCAGATaGAGGCTCAGGGAGATTAAAGTAACTTGTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: EIIKTSILKMSR*RLREIKVTCPR Trigger: CCTTGGACAAGTTACTTTAATCTCCCTGAGCCTCAATCTGCTCATCTTTAAGATGGAAGTCTTAATAATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641192.1 |
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| CDS GCA 72 bp | GAGAATTTGCAAAGTGCTGTGGCAATTTTCCCAATATaGTTCAAGGTGTATAAACTTTCTTCCATTAATCCA | + |
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Preference number: 6 (lower is better) Translates to: ENLQSAVAIFPI*FKVYKLSSINP Trigger: TGGATTAATGGAAGAAAGTTTATACACCTTGAAGCATATTGGGAAAATTGCCACAGCACTTTGCAAATTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641749.1 |
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