Pregenerated sensors for LINC02801 (Homo sapiens)
Ensembl gene IDs: ENSG00000284240Ensembl transcript IDs: ENST00000640362.1, ENST00000640491.1, ENST00000640794.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CATGGCTGGAAGCCAACTTTCTGTGGGTACAAGCCAGGTGTCCCGTaGACAAGAGCCACTGGGGAAGATGTCCCGGGCCCATCCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: HGWKPTFCGYKPGVP*TRATGEDVPGPSIS Trigger: AGAGATGGATGGGCCCGGGACATCTTCCCCAGTGGCTCTTGTCCACGGGACACCTGGCTTGTACCCACAGAAAGTTGGCTTCCAGCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 90 bp | TCTGCCACGCCATCTCCTAGGCACCTTTCACCCAACGAATATGGGTaGAGCAGCTCACACGTCCAAGCTCTGTGCTGGGCCCTTATGTCC | + |
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Preference number: 5 (lower is better) Translates to: SATPSPRHLSPNEYG*SSSHVQALCWALMS Trigger: GGACATAAGGGCCCAGCACAGAGCTTGGACGTGTGAGCTGCTCCACCCATATTCGTTGGGTGAAAGGTGCCTAGGAGATGGCGTGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640491.1 |
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| CDS CCA 90 bp | AACTTTCTGTGGGTACAAGCCAGGTGTCCCGTGGACAAGAGCCACTaGGGAAGATGTCCCGGGCCCATCCATCTCTTATCTTCGATCCGT | + |
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Preference number: 5 (lower is better) Translates to: NFLWVQARCPVDKSH*GRCPGPIHLLSSIR Trigger: ACGGATCGAAGATAAGAGATGGATGGGCCCGGGACATCTTCCCCAGTGGCTCTTGTCCACGGGACACCTGGCTTGTACCCACAGAAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 90 bp | ACTCACTGTAGGAAGGCAAGGGCCCTCACTGTTCTCACTCAAGCATaGCTGGAAGCCAACTTTCTGTGGGTACAAGCCAGGTGTCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: THCRKARALTVLTQA*LEANFLWVQARCPV Trigger: CACGGGACACCTGGCTTGTACCCACAGAAAGTTGGCTTCCAGCCATGCTTGAGTGAGAACAGTGAGGGCCCTTGCCTTCCTACAGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS TCA 90 bp | GGGGAAGATGTCCCGGGCCCATCCATCTCTTATCTTCGATCCGTTTaGCGAGTTCCTTTCTTGCCTTCCCTCTGTTCGTACTCCACATGG | + |
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Preference number: 5 (lower is better) Translates to: GEDVPGPSISYLRSV*RVPFLPSLCSYSTW Trigger: CCATGTGGAGTACGAACAGAGGGAAGGCAAGAAAGGAACTCGTCAAACGGATCGAAGATAAGAGATGGATGGGCCCGGGACATCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 90 bp | CTTTCCCTAGGCCCTATCTTTGGCTATCCAGGCGCTACACAAAGCTaGGAGTGCATCCCAGGCCCTACTATGAGGGTTTGCATCCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: LSLGPIFGYPGATQS*ECIPGPTMRVCIPN Trigger: ATTTGGGATGCAAACCCTCATAGTAGGGCCTGGGATGCACTCCCAGCTTTGTGTAGCGCCTGGATAGCCAAAGATAGGGCCTAGGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS TCA 90 bp | ATCCAGGCGCTACACAAAGCTGGGAGTGCATCCCAGGCCCTACTATaGGGGTTTGCATCCCAAATAAGTAGAGGACACAAATCACTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IQALHKAGSASQALL*GFASQISRGHKSLR Trigger: CCTCAGTGATTTGTGTCCTCTACTTATTTGGGATGCAAACCCTCATAGTAGGGCCTGGGATGCACTCCCAGCTTTGTGTAGCGCCTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 90 bp | ACATGTTATTTGGTGTCTAAGAAACCTTTCCCTAGGCCCTATCTTTaGCTATCCAGGCGCTACACAAAGCTGGGAGTGCATCCCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: TCYLVSKKPFPRPYL*LSRRYTKLGVHPRP Trigger: GGGCCTGGGATGCACTCCCAGCTTTGTGTAGCGCCTGGATAGCCAAAGATAGGGCCTAGGGAAAGGTTTCTTAGACACCAAATAACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS GCA 90 bp | GCCCATCCATCTCTTATCTTCGATCCGTTTGACGAGTTCCTTTCTTaGCTTCCCTCTGTTCGTACTCCACATGGTTCCCTGGACAAACTC | + |
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Preference number: 5 (lower is better) Translates to: AHPSLIFDPFDEFLS*LPSVRTPHGSLDKL Trigger: GAGTTTGTCCAGGGAACCATGTGGAGTACGAACAGAGGGAAGGCAAGAAAGGAACTCGTCAAACGGATCGAAGATAAGAGATGGATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS GCA 90 bp | CCAGTGTGGAATCCGGTACTTTCTTCCTTTTCCAGCTCCAGCATGTaGTGGGTGAACTTCAGCAAGTTACTTCATTCCTCTGGGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: PVWNPVLSSFSSSSM*WVNFSKLLHSSGTQ Trigger: CTGAGTCCCAGAGGAATGAAGTAACTTGCTGAAGTTCACCCAGCACATGCTGGAGCTGGAAAAGGAAGAAAGTACCGGATTCCACACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS GCA 90 bp | CCCATTCTGTGGCCTTTGGAAACCCAAAGCTCTCCTCCAGATTGCTaGCACTTCCAAGGGACCTCTTCTCAAGGTTTTCAGCTCCAATTT | + |
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Preference number: 5 (lower is better) Translates to: PILWPLETQSSPPDC*HFQGTSSQGFQLQF Trigger: AAATTGGAGCTGAAAACCTTGAGAAGAGGTCCCTTGGAAGTGGCAGCAATCTGGAGGAGAGCTTTGGGTTTCCAAAGGCCACAGAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640491.1 |
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| CDS CCA 90 bp | CTCAATCATTGGTTGTCCTCAGAACCTTGCCTCAGTTTCTTACCATaGCAGCATCCTGGCAGGCTTCATGACCTTGGGAAAGGGAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: LNHWLSSEPCLSFLP*QHPGRLHDLGKGSE Trigger: TTCACTCCCTTTCCCAAGGTCATGAAGCCTGCCAGGATGCTGCCATGGTAAGAAACTGAGGCAAGGTTCTGAGGACAACCAATGATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS GCA 90 bp | GGAGAAATCAAACAGCCTCTCAATCATTGGTTGTCCTCAGAACCTTaGCTCAGTTTCTTACCATGGCAGCATCCTGGCAGGCTTCATGAC | + |
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Preference number: 5 (lower is better) Translates to: GEIKQPLNHWLSSEP*LSFLPWQHPGRLHD Trigger: GTCATGAAGCCTGCCAGGATGCTGCCATGGTAAGAAACTGAGGCAAGGTTCTGAGGACAACCAATGATTGAGAGGCTGTTTGATTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS TCA 90 bp | GCCACTTCCAAGGGACCTCTTCTCAAGGTTTTCAGCTCCAATTTCTaGACCAGCTACCTTTGTCCCACACATATCAATCCCAGTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: ATSKGPLLKVFSSNF*TSYLCPTHINPSVE Trigger: TTCCACACTGGGATTGATATGTGTGGGACAAAGGTAGCTGGTTCAGAAATTGGAGCTGAAAACCTTGAGAAGAGGTCCCTTGGAAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640491.1 |
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| CDS CCA 90 bp | GTGTGGAATCCGGTACTTTCTTCCTTTTCCAGCTCCAGCATGTGCTaGGTGAACTTCAGCAAGTTACTTCATTCCTCTGGGACTCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VWNPVLSSFSSSSMC*VNFSKLLHSSGTQF Trigger: AAACTGAGTCCCAGAGGAATGAAGTAACTTGCTGAAGTTCACCCAGCACATGCTGGAGCTGGAAAAGGAAGAAAGTACCGGATTCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 90 bp | ATTTCTGAACCAGCTACCTTTGTCCCACACATATCAATCCCAGTGTaGAATCCGGTACTTTCTTCCTTTTCCAGCTCCAGCATGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ISEPATFVPHISIPV*NPVLSSFSSSSMCW Trigger: CCAGCACATGCTGGAGCTGGAAAAGGAAGAAAGTACCGGATTCCACACTGGGATTGATATGTGTGGGACAAAGGTAGCTGGTTCAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 90 bp | AGTTCCTTTCTTGCCTTCCCTCTGTTCGTACTCCACATGGTTCCCTaGACAAACTCATCTGTTTCCCATAGCATCATCCAACATTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSFLAFPLFVLHMVP*TNSSVSHSIIQHFR Trigger: CCTGAAATGTTGGATGATGCTATGGGAAACAGATGAGTTTGTCCAGGGAACCATGTGGAGTACGAACAGAGGGAAGGCAAGAAAGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 90 bp | ATTTCTGAACCAGCTACCTTTGTCCCACACATATCAATCCCAGTGTaGAATCCGGTACTTTCTTCCTTTTCTGAGTACTGCTGGGAATGC | + |
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Preference number: 5 (lower is better) Translates to: ISEPATFVPHISIPV*NPVLSSFSEYCWEC Trigger: GCATTCCCAGCAGTACTCAGAAAAGGAAGAAAGTACCGGATTCCACACTGGGATTGATATGTGTGGGACAAAGGTAGCTGGTTCAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640491.1 |
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| CDS CCA 90 bp | TCTACATGTATGCTCACCTCCTCCTTATCTAGATTACAGACAGCCTaGGGACAGAGATTTTGTACTTACCTGGCTTCACCATTGTACCTA | + |
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Preference number: 5 (lower is better) Translates to: STCMLTSSLSRLQTA*GQRFCTYLASPLYL Trigger: TAGGTACAATGGTGAAGCCAGGTAAGTACAAAATCTCTGTCCCCAGGCTGTCTGTAATCTAGATAAGGAGGAGGTGAGCATACATGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 90 bp | TCCATATTTCTGACTCATTTATGTATAAATCATCTACATGTTATTTaGTGTCTAAGAAACCTTTCCCTAGGCCCTATCTTTGGCTATCCA | + |
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Preference number: 5 (lower is better) Translates to: SIFLTHLCINHLHVI*CLRNLSLGPIFGYP Trigger: TGGATAGCCAAAGATAGGGCCTAGGGAAAGGTTTCTTAGACACCAAATAACATGTAGATGATTTATACATAAATGAGTCAGAAATATGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 72 bp | AAGCCAACTTTCTGTGGGTACAAGCCAGGTGTCCCGTaGACAAGAGCCACTGGGGAAGATGTCCCGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: KPTFCGYKPGVP*TRATGEDVPGP Trigger: TGGGCCCGGGACATCTTCCCCAGTGGCTCTTGTCCACGGGACACCTGGCTTGTACCCACAGAAAGTTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 72 bp | TGGGTACAAGCCAGGTGTCCCGTGGACAAGAGCCACTaGGGAAGATGTCCCGGGCCCATCCATCTCTTATCT | + |
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Preference number: 6 (lower is better) Translates to: WVQARCPVDKSH*GRCPGPIHLLS Trigger: AGATAAGAGATGGATGGGCCCGGGACATCTTCCCCAGTGGCTCTTGTCCACGGGACACCTGGCTTGTACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 72 bp | CCATCTCCTAGGCACCTTTCACCCAACGAATATGGGTaGAGCAGCTCACACGTCCAAGCTCTGTGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PSPRHLSPNEYG*SSSHVQALCWA Trigger: GGCCCAGCACAGAGCTTGGACGTGTGAGCTGCTCCACCCATATTCGTTGGGTGAAAGGTGCCTAGGAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640491.1 |
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| CDS CCA 72 bp | TGTGGGGTGGCCATCTCCCACCCATTCTGTGGCCTTTaGAAACCCAAAGCTCTCCTCCAGATTGCTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: CGVAISHPFCGL*KPKALLQIAAT Trigger: AGTGGCAGCAATCTGGAGGAGAGCTTTGGGTTTCCAAAGGCCACAGAATGGGTGGGAGATGGCCACCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640491.1 |
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| CDS GCA 72 bp | ATCTTTGGCTATCCAGGCGCTACACAAAGCTGGGAGTaGATCCCAGGCCCTACTATGAGGGTTTGCATCCCA | + |
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Preference number: 6 (lower is better) Translates to: IFGYPGATQSWE*IPGPTMRVCIP Trigger: TGGGATGCAAACCCTCATAGTAGGGCCTGGGATGCACTCCCAGCTTTGTGTAGCGCCTGGATAGCCAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS GCA 72 bp | GACAATGGCATAGCCCCCACAGGTTGCTCTGCTGTGTaGTTTCTGAGTGAAGACCTGATTCGACTCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: DNGIAPTGCSAV*FLSEDLIRLQG Trigger: CCCTTGGAGTCGAATCAGGTCTTCACTCAGAAAGCACACAGCAGAGCAACCTGTGGGGGCTATGCCATTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 72 bp | AGAAGCCTTTGTGCCTCCCACCCATTCTGTGGCCTTTaGAAACCCAAAGCTCTCCTCCAGATTGCTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RSLCASHPFCGL*KPKALLQIAAT Trigger: AGTGGCAGCAATCTGGAGGAGAGCTTTGGGTTTCCAAAGGCCACAGAATGGGTGGGAGGCACAAAGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS TCA 72 bp | GTCCCGGGCCCATCCATCTCTTATCTTCGATCCGTTTaGCGAGTTCCTTTCTTGCCTTCCCTCTGTTCGTAC | + |
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Preference number: 6 (lower is better) Translates to: VPGPSISYLRSV*RVPFLPSLCSY Trigger: GTACGAACAGAGGGAAGGCAAGAAAGGAACTCGTCAAACGGATCGAAGATAAGAGATGGATGGGCCCGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CAA 90 bp | TGGGGAAGATGTCCCGGGCCCATCCATCTCTTATCTTCGATCCGTTaGACGAGTTCCTTTCTTGCCTTCCCTCTGTTCGTACTCCACATG | + |
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Preference number: 6 (lower is better) Translates to: WGRCPGPIHLLSSIR*TSSFLAFPLFVLHM Trigger: CATGTGGAGTACGAACAGAGGGAAGGCAAGAAAGGAACTCGTCAAACGGATCGAAGATAAGAGATGGATGGGCCCGGGACATCTTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS GCA 72 bp | TGGCCTTTGGAAACCCAAAGCTCTCCTCCAGATTGCTaGCACTTCCAAGGGACCTCTTCTCAAGGTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: WPLETQSSPPDC*HFQGTSSQGFQ Trigger: CTGAAAACCTTGAGAAGAGGTCCCTTGGAAGTGGCAGCAATCTGGAGGAGAGCTTTGGGTTTCCAAAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640491.1 |
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| CDS CAA 72 bp | TGTCCCGGGCCCATCCATCTCTTATCTTCGATCCGTTaGACGAGTTCCTTTCTTGCCTTCCCTCTGTTCGTA | + |
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Preference number: 6 (lower is better) Translates to: CPGPIHLLSSIR*TSSFLAFPLFV Trigger: TACGAACAGAGGGAAGGCAAGAAAGGAACTCGTCAAACGGATCGAAGATAAGAGATGGATGGGCCCGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS TCA 72 bp | CCTGGGAAGAGCTGCAGAGCCTTTAATACAGCTTCCTaGGATCATAGTGTTTGGGCTTCAGGAAACAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: PGKSCRAFNTAS*DHSVWASGNKP Trigger: GGGCTTGTTTCCTGAAGCCCAAACACTATGATCTCAGGAAGCTGTATTAAAGGCTCTGCAGCTCTTCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 72 bp | CCGGTACTTTCTTCCTTTTCCAGCTCCAGCATGTGCTaGGTGAACTTCAGCAAGTTACTTCATTCCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PVLSSFSSSSMC*VNFSKLLHSSG Trigger: CCCAGAGGAATGAAGTAACTTGCTGAAGTTCACCCAGCACATGCTGGAGCTGGAAAAGGAAGAAAGTACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 72 bp | TTGGTGTCTAAGAAACCTTTCCCTAGGCCCTATCTTTaGCTATCCAGGCGCTACACAAAGCTGGGAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LVSKKPFPRPYL*LSRRYTKLGVH Trigger: ATGCACTCCCAGCTTTGTGTAGCGCCTGGATAGCCAAAGATAGGGCCTAGGGAAAGGTTTCTTAGACACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CAA 90 bp | TCTTTGCCTTCTCTTTTCCACTCAGACCTTCTCTCCCTCCTGGAATaGGCCTCATCTCTGACTGTTCAAATCCTACCCAATCTCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLPSLFHSDLLSLLE*ASSLTVQILPNLKA Trigger: GGCCTTGAGATTGGGTAGGATTTGAACAGTCAGAGATGAGGCCAATTCCAGGAGGGAGAGAAGGTCTGAGTGGAAAAGAGAAGGCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CAA 90 bp | CTCAGGCTAATTGGCTCCCCTTCTTACAACACACCTGGACTATCTTaGCCTTCTCTTTTCCACTCAGACCTTCTCTCCCTCCTGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: LRLIGSPSYNTPGLS*PSLFHSDLLSLLEL Trigger: CAATTCCAGGAGGGAGAGAAGGTCTGAGTGGAAAAGAGAAGGCAAAGATAGTCCAGGTGTGTTGTAAGAAGGGGAGCCAATTAGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS TCA 72 bp | CTACACAAAGCTGGGAGTGCATCCCAGGCCCTACTATaGGGGTTTGCATCCCAAATAAGTAGAGGACACAAA | + |
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Preference number: 6 (lower is better) Translates to: LHKAGSASQALL*GFASQISRGHK Trigger: TTTGTGTCCTCTACTTATTTGGGATGCAAACCCTCATAGTAGGGCCTGGGATGCACTCCCAGCTTTGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS GCA 72 bp | TCTCTTATCTTCGATCCGTTTGACGAGTTCCTTTCTTaGCTTCCCTCTGTTCGTACTCCACATGGTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLIFDPFDEFLS*LPSVRTPHGSL Trigger: CAGGGAACCATGTGGAGTACGAACAGAGGGAAGGCAAGAAAGGAACTCGTCAAACGGATCGAAGATAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 72 bp | CTTGCCTTCCCTCTGTTCGTACTCCACATGGTTCCCTaGACAAACTCATCTGTTTCCCATAGCATCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: LAFPLFVLHMVP*TNSSVSHSIIQ Trigger: TTGGATGATGCTATGGGAAACAGATGAGTTTGTCCAGGGAACCATGTGGAGTACGAACAGAGGGAAGGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640794.1 |
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| CDS CCA 72 bp | ATGCTCACCTCCTCCTTATCTAGATTACAGACAGCCTaGGGACAGAGATTTTGTACTTACCTGGCTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: MLTSSLSRLQTA*GQRFCTYLASP Trigger: TGGTGAAGCCAGGTAAGTACAAAATCTCTGTCCCCAGGCTGTCTGTAATCTAGATAAGGAGGAGGTGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CAA 72 bp | CAAGGTTTTCAGCTCCAATTTCTGAACCAGCTACCTTaGTCCCACACATATCAATCCCAGTGTGGAATCCGG | + |
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Preference number: 6 (lower is better) Translates to: QGFQLQFLNQLP*SHTYQSQCGIR Trigger: CCGGATTCCACACTGGGATTGATATGTGTGGGACAAAGGTAGCTGGTTCAGAAATTGGAGCTGAAAACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640491.1 |
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| CDS CAA 72 bp | TGGGGACAGAGATTTTGTACTTACCTGGCTTCACCATaGTACCTAGCAGAGGGCTGTTTATGTGAGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: WGQRFCTYLASP*YLAEGCLCEQV Trigger: CACTTGCTCACATAAACAGCCCTCTGCTAGGTACAATGGTGAAGCCAGGTAAGTACAAAATCTCTGTCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CAA 90 bp | CAGACAGCCTGGGGACAGAGATTTTGTACTTACCTGGCTTCACCATaGTACCTAGCAGAGGGCTGTTTATGTGAGCAAGTGATAAATGAA | + |
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Preference number: 6 (lower is better) Translates to: QTAWGQRFCTYLASP*YLAEGCLCEQVINE Trigger: TTCATTTATCACTTGCTCACATAAACAGCCCTCTGCTAGGTACAATGGTGAAGCCAGGTAAGTACAAAATCTCTGTCCCCAGGCTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS TCA 72 bp | AAGGGACCTCTTCTCAAGGTTTTCAGCTCCAATTTCTaGACCAGCTACCTTTGTCCCACACATATCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: KGPLLKVFSSNF*TSYLCPTHINP Trigger: GGGATTGATATGTGTGGGACAAAGGTAGCTGGTTCAGAAATTGGAGCTGAAAACCTTGAGAAGAGGTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640491.1 |
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| CDS GCA 72 bp | AATCCGGTACTTTCTTCCTTTTCCAGCTCCAGCATGTaGTGGGTGAACTTCAGCAAGTTACTTCATTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: NPVLSSFSSSSM*WVNFSKLLHSS Trigger: AGAGGAATGAAGTAACTTGCTGAAGTTCACCCAGCACATGCTGGAGCTGGAAAAGGAAGAAAGTACCGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 72 bp | CTAGAGCAGAAGCCTTTGTGCCTGGGTTCATATTTGTaGACCGTTTCCACGGCTTTGTCAATTTTCTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LEQKPLCLGSYL*TVSTALSIFCE Trigger: TTCACAGAAAATTGACAAAGCCGTGGAAACGGTCCACAAATATGAACCCAGGCACAAAGGCTTCTGCTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640794.1 |
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| CDS CAA 72 bp | CAGCATCTAGAAGCTTCCTCAGGGAAAGAGGGGAATTaGCTAGGTTGCCAAACATCCTTAGAAAATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QHLEASSGKEGN*LGCQTSLENLL Trigger: CAGCAGATTTTCTAAGGATGTTTGGCAACCTAGCAAATTCCCCTCTTTCCCTGAGGAAGCTTCTAGATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CAA 90 bp | ACCTCTTCTCAAGGTTTTCAGCTCCAATTTCTGAACCAGCTACCTTaGTCCCACACATATCAATCCCAGTGTGGAATCCGGTACTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TSSQGFQLQFLNQLP*SHTYQSQCGIRYFL Trigger: AAGAAAGTACCGGATTCCACACTGGGATTGATATGTGTGGGACAAAGGTAGCTGGTTCAGAAATTGGAGCTGAAAACCTTGAGAAGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640362.1 ENST00000640491.1 |
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| CDS CAA 90 bp | ACTTATTTCAGCTATTTGCTGAAGAAAAGCTGTCTTCAATTCCTGTaGTTTTCAGCATGCCACCCAACAGCATCTAGAAGCTTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TYFSYLLKKSCLQFL*FSACHPTASRSFLR Trigger: CCTGAGGAAGCTTCTAGATGCTGTTGGGTGGCATGCTGAAAACAACAGGAATTGAAGACAGCTTTTCTTCAGCAAATAGCTGAAATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CCA 72 bp | AACCACGTTTCTTTCAAAATACACATCTCAAGAGGATaGCTTGGGACTGAGTTGCCTGTAAAATCCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: NHVSFKIHISRG*LGTELPVKSTL Trigger: CAAAGTGGATTTTACAGGCAACTCAGTCCCAAGCCATCCTCTTGAGATGTGTATTTTGAAAGAAACGTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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| CDS CAA 90 bp | CTCCATATTTCTGACTCATTTATGTATAAATCATCTACATGTTATTaGGTGTCTAAGAAACCTTTCCCTAGGCCCTATCTTTGGCTATCC | + |
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Preference number: 6 (lower is better) Translates to: LHISDSFMYKSSTCY*VSKKPFPRPYLWLS Trigger: GGATAGCCAAAGATAGGGCCTAGGGAAAGGTTTCTTAGACACCAAATAACATGTAGATGATTTATACATAAATGAGTCAGAAATATGGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640362.1 |
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