Pregenerated sensors for LINC02773 (Homo sapiens)
Ensembl gene IDs: ENSG00000237980Ensembl transcript IDs: ENST00000446962.1, ENST00000653931.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCGATCCAGGCGACTCCGGGCCCTGCAGCCACCCTCCCCGAGGCTaGCCCGCGGAGGACCCAAGCGGTCGTGGAGGACGCTCTCCCACT | + |
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Preference number: 5 (lower is better) Translates to: CDPGDSGPCSHPPRG*PAEDPSGRGGRSPT Trigger: AGTGGGAGAGCGTCCTCCACGACCGCTTGGGTCCTCCGCGGGGCAGCCTCGGGGAGGGTGGCTGCAGGGCCCGGAGTCGCCTGGATCGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS GCA 90 bp | CCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCACGAGATGGCGCTaGGATCCAGGCGACTCCGGGCCCTGCAGCCACCCTCCCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PRGPKADLPAATRWR*DPGDSGPCSHPPRG Trigger: GCCTCGGGGAGGGTGGCTGCAGGGCCCGGAGTCGCCTGGATCGCAGCGCCATCTCGTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS GCA 90 bp | CCAGCTTCCCTCTTCCCTCCCTCCTCCTTCCTCGCCCCCTGGCCCTaGGAAGAGTGGAGGCCGCATCAGGGAGCCCTAGGCCCAAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PASLFPPSSFLAPWP*EEWRPHQGALGPRA Trigger: CGCCCTTGGGCCTAGGGCTCCCTGATGCGGCCTCCACTCTTCGCAGGGCCAGGGGGCGAGGAAGGAGGAGGGAGGGAAGAGGGAAGCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CCA 90 bp | CTTGTGCCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCACGAGATaGCGCTGCGATCCAGGCGACTCCGGGCCCTGCAGCCACCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LVPRGPKADLPAATR*RCDPGDSGPCSHPP Trigger: GGGAGGGTGGCTGCAGGGCCCGGAGTCGCCTGGATCGCAGCGCCATCTCGTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CCA 90 bp | CACTCCCCAGCTTCCCTCTTCCCTCCCTCCTCCTTCCTCGCCCCCTaGCCCTGCGAAGAGTGGAGGCCGCATCAGGGAGCCCTAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: HSPASLFPPSSFLAP*PCEEWRPHQGALGP Trigger: TGGGCCTAGGGCTCCCTGATGCGGCCTCCACTCTTCGCAGGGCCAGGGGGCGAGGAAGGAGGAGGGAGGGAAGAGGGAAGCTGGGGAGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS TCA 90 bp | CCAAGAGGGCTTCCTGTAGGCAGATGTGGGAGCAGGAGTCACTGGTaGCACTGGAGCATTCTCCTGGGTGCGGGCCGGCGGGCACCTGTC | + |
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Preference number: 5 (lower is better) Translates to: PRGLPVGRCGSRSHW*HWSILLGAGRRAPV Trigger: GACAGGTGCCCGCCGGCCCGCACCCAGGAGAATGCTCCAGTGTCACCAGTGACTCCTGCTCCCACATCTGCCTACAGGAAGCCCTCTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS TCA 90 bp | ACACTGGAGCATTCTCCTGGGTGCGGGCCGGCGGGCACCTGTCACTaGTGGGAAGAGCTCCTGTTTCCTTGCCTTGTGCCAAGAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: TLEHSPGCGPAGTCH*WEELLFPCLVPRGP Trigger: GGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGGTGCCCGCCGGCCCGCACCCAGGAGAATGCTCCAGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS GCA 90 bp | CGGGCACCTGTCACTGATGGGAAGAGCTCCTGTTTCCTTGCCTTGTaGCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCACGAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: RAPVTDGKSSCFLAL*QEGPRQTCQQPRDG Trigger: GCCATCTCGTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGGTGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS GCA 90 bp | TCCTGGGCTGTCACTGATGGGAAGAGCTCCTGTTTCCTTGCCTTGTaGCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCACGAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: SWAVTDGKSSCFLAL*QEGPRQTCQQPRDG Trigger: GCCATCTCGTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGCCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446962.1 |
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| CDS TCA 90 bp | CCCCCATCCCAAAATCACCCTTCCTTCACCTGGGAAGTCAATGCCTaGGACTCCACCATTACAGATACAATGCAAACCTTCCTGGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PPSQNHPSFTWEVNA*DSTITDTMQTFLGD Trigger: GTCTCCCAGGAAGGTTTGCATTGTATCTGTAATGGTGGAGTCTCAGGCATTGACTTCCCAGGTGAAGGAAGGGTGATTTTGGGATGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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| CDS TCA 90 bp | TTCTCTTTTTCACTCAGAATAGGCGCTGCAAGTCTGTCCTGCTGGTaGTGCACATACTTGATGCCTCCCAGAAGTGAGATGCTTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: FSFSLRIGAASLSCW*CTYLMPPRSEMLLF Trigger: GAACAAAAGCATCTCACTTCTGGGAGGCATCAAGTATGTGCATCACCAGCAGGACAGACTTGCAGCGCCTATTCTGAGTGAAAAAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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| CDS GCA 90 bp | TCACCTGGGAAGTCAATGCCTGAGACTCCACCATTACAGATACAATaGAAACCTTCCTGGGAGACAAAACTCCTCATATACACCTTAAAG | + |
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Preference number: 5 (lower is better) Translates to: SPGKSMPETPPLQIQ*KPSWETKLLIYTLK Trigger: CTTTAAGGTGTATATGAGGAGTTTTGTCTCCCAGGAAGGTTTGCATTGTATCTGTAATGGTGGAGTCTCAGGCATTGACTTCCCAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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| CDS GCA 72 bp | ACGAGATGGCGCTGCGATCCAGGCGACTCCGGGCCCTaGAGCCACCCTCCCCGAGGCTGCCCCGCGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TRWRCDPGDSGP*SHPPRGCPAED Trigger: GTCCTCCGCGGGGCAGCCTCGGGGAGGGTGGCTGCAGGGCCCGGAGTCGCCTGGATCGCAGCGCCATCTCGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CCA 72 bp | GCTTCCCTCTTCCCTCCCTCCTCCTTCCTCGCCCCCTaGCCCTGCGAAGAGTGGAGGCCGCATCAGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASLFPPSSFLAP*PCEEWRPHQGA Trigger: GGCTCCCTGATGCGGCCTCCACTCTTCGCAGGGCCAGGGGGCGAGGAAGGAGGAGGGAGGGAAGAGGGAAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CAA 90 bp | CGGGCCGGCGGGCACCTGTCACTGATGGGAAGAGCTCCTGTTTCCTaGCCTTGTGCCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RAGGHLSLMGRAPVS*PCAKRAQGRPASSH Trigger: GTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGGTGCCCGCCGGCCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CAA 90 bp | CGGCGGGCACCTGTCACTGATGGGAAGAGCTCCTGTTTCCTTGCCTaGTGCCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCACGAGAT | + |
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Preference number: 6 (lower is better) Translates to: RRAPVTDGKSSCFLA*CQEGPRQTCQQPRD Trigger: ATCTCGTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGGTGCCCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS TCA 72 bp | CATTCTCCTGGGTGCGGGCCGGCGGGCACCTGTCACTaGTGGGAAGAGCTCCTGTTTCCTTGCCTTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: HSPGCGPAGTCH*WEELLFPCLVP Trigger: TGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGGTGCCCGCCGGCCCGCACCCAGGAGAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CAA 72 bp | CCTGGGCTGTCACTGATGGGAAGAGCTCCTGTTTCCTaGCCTTGTGCCAAGAGGGCCCAAGGCAGACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PGLSLMGRAPVS*PCAKRAQGRPA Trigger: GGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446962.1 |
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| CDS CAA 72 bp | GGGCACCTGTCACTGATGGGAAGAGCTCCTGTTTCCTaGCCTTGTGCCAAGAGGGCCCAAGGCAGACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GHLSLMGRAPVS*PCAKRAQGRPA Trigger: GGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGGTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CAA 90 bp | GAGCATTCTCCTGGGCTGTCACTGATGGGAAGAGCTCCTGTTTCCTaGCCTTGTGCCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: EHSPGLSLMGRAPVS*PCAKRAQGRPASSH Trigger: GTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGCCCAGGAGAATGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446962.1 |
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| CDS CAA 72 bp | GCTGTCACTGATGGGAAGAGCTCCTGTTTCCTTGCCTaGTGCCAAGAGGGCCCAAGGCAGACCTGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AVTDGKSSCFLA*CQEGPRQTCQQ Trigger: CTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446962.1 |
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| CDS CAA 72 bp | CCTGTCACTGATGGGAAGAGCTCCTGTTTCCTTGCCTaGTGCCAAGAGGGCCCAAGGCAGACCTGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PVTDGKSSCFLA*CQEGPRQTCQQ Trigger: CTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CAA 90 bp | TTCTCCTGGGCTGTCACTGATGGGAAGAGCTCCTGTTTCCTTGCCTaGTGCCAAGAGGGCCCAAGGCAGACCTGCCAGCAGCCACGAGAT | + |
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Preference number: 6 (lower is better) Translates to: FSWAVTDGKSSCFLA*CQEGPRQTCQQPRD Trigger: ATCTCGTGGCTGCTGGCAGGTCTGCCTTGGGCCCTCTTGGCACAAGGCAAGGAAACAGGAGCTCTTCCCATCAGTGACAGCCCAGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446962.1 |
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| CDS CCA 72 bp | ACATTGATCCTGGATGCAGCTGGCTGGCAGAGGTGCTaGTGTGCTGTTTCTTCAGAGGTTTCAGGAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TLILDAAGWQRC*CAVSSEVSGRP Trigger: GGGCCTTCCTGAAACCTCTGAAGAAACAGCACACCAGCACCTCTGCCAGCCAGCTGCATCCAGGATCAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS CAA 90 bp | GGACTTGGAAAGCTTCAAAAGAGTGAACCAGAACTAGGGGGAACATaGATCCTGGATGCAGCTGGCTGGCAGAGGTGCTGGTGTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GLGKLQKSEPELGGT*ILDAAGWQRCWCAV Trigger: AACAGCACACCAGCACCTCTGCCAGCCAGCTGCATCCAGGATCAATGTTCCCCCTAGTTCTGGTTCACTCTTTTGAAGCTTTCCAAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS TCA 72 bp | CTGCTGGTGATGCACATACTTGATGCCTCCCAGAAGTaGGATGCTTTTGTTCCAAGAGGGCTTCCTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLVMHILDASQK*DAFVPRGLPVG Trigger: GCCTACAGGAAGCCCTCTTGGAACAAAAGCATCTCACTTCTGGGAGGCATCAAGTATGTGCATCACCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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| CDS TCA 72 bp | TCACTCAGAATAGGCGCTGCAAGTCTGTCCTGCTGGTaGTGCACATACTTGATGCCTCCCAGAAGTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: SLRIGAASLSCW*CTYLMPPRSEM Trigger: CATCTCACTTCTGGGAGGCATCAAGTATGTGCATCACCAGCAGGACAGACTTGCAGCGCCTATTCTGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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| CDS TCA 72 bp | GAATTCACTTCTGGGACTTGGAAAGCTTCAAAAGAGTaGACCAGAACTAGGGGGAACATTGATCCTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: EFTSGTWKASKE*TRTRGNIDPGC Trigger: GCATCCAGGATCAATGTTCCCCCTAGTTCTGGTTCACTCTTTTGAAGCTTTCCAAGTCCCAGAAGTGAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653931.1 |
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| CDS GCA 72 bp | ATCCCAAAATCACCCTTCCTTCACCTGGGAAGTCAATaGCTGAGACTCCACCATTACAGATACAATGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: IPKSPFLHLGSQ*LRLHHYRYNAN Trigger: GTTTGCATTGTATCTGTAATGGTGGAGTCTCAGGCATTGACTTCCCAGGTGAAGGAAGGGTGATTTTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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| CDS GCA 72 bp | AAGTCAATGCCTGAGACTCCACCATTACAGATACAATaGAAACCTTCCTGGGAGACAAAACTCCTCATATAC | + |
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Preference number: 6 (lower is better) Translates to: KSMPETPPLQIQ*KPSWETKLLIY Trigger: GTATATGAGGAGTTTTGTCTCCCAGGAAGGTTTGCATTGTATCTGTAATGGTGGAGTCTCAGGCATTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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| CDS CAA 90 bp | AAGAGGGTCAATGTTGAGAAGAATCCAAGTGGAGAAAGGATGAGGTaGGTTGAGGGTAGCACCAAAAGATTCTCTTTTTCACTCAGAATA | + |
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Preference number: 6 (lower is better) Translates to: KRVNVEKNPSGERMR*VEGSTKRFSFSLRI Trigger: TATTCTGAGTGAAAAAGAGAATCTTTTGGTGCTACCCTCAACCAACCTCATCCTTTCTCCACTTGGATTCTTCTCAACATTGACCCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446962.1 ENST00000653931.1 |
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