Pregenerated sensors for LINC02761 (Homo sapiens)
Ensembl gene IDs: ENSG00000255362Ensembl transcript IDs: ENST00000531538.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCTGGTGTTTACTAAGCGTGCGTGCTGCGTGCCTGCGACACGCGTaGGGCCCGGGTAAGGCCCATCTCGAATCGTCGCAGCAACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SWCLLSVRAACLRHA*GPGKAHLESSQQPG Trigger: GCCTGGTTGCTGCGACGATTCGAGATGGGCCTTACCCGGGCCCCACGCGTGTCGCAGGCACGCAGCACGCACGCTTAGTAAACACCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS CCA 90 bp | CAGCAACCAGGCAAGGAGCCTCAACTGGCAGGGGGAAGTCAGACTTaGGTCTCAGTCTGGAGCCGGGGCATCCTTAGGTGTTGGTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: QQPGKEPQLAGGSQT*VSVWSRGILRCWSR Trigger: GCGCGACCAACACCTAAGGATGCCCCGGCTCCAGACTGAGACCCAAGTCTGACTTCCCCCTGCCAGTTGAGGCTCCTTGCCTGGTTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS CCA 90 bp | AGGCCCATCTCGAATCGTCGCAGCAACCAGGCAAGGAGCCTCAACTaGCAGGGGGAAGTCAGACTTGGGTCTCAGTCTGGAGCCGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RPISNRRSNQARSLN*QGEVRLGSQSGAGA Trigger: TGCCCCGGCTCCAGACTGAGACCCAAGTCTGACTTCCCCCTGCCAGTTGAGGCTCCTTGCCTGGTTGCTGCGACGATTCGAGATGGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS CCA 90 bp | AAGGAGCCTCAACTGGCAGGGGGAAGTCAGACTTGGGTCTCAGTCTaGAGCCGGGGCATCCTTAGGTGTTGGTCGCGCAGCGTGGTTACT | + |
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Preference number: 5 (lower is better) Translates to: KEPQLAGGSQTWVSV*SRGILRCWSRSVVT Trigger: AGTAACCACGCTGCGCGACCAACACCTAAGGATGCCCCGGCTCCAGACTGAGACCCAAGTCTGACTTCCCCCTGCCAGTTGAGGCTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS TCA 90 bp | GGCATCCTTAGGTGTTGGTCGCGCAGCGTGGTTACTGTAGACGTCTaGGGTCCCGAAACCTGCCTTCGTGTCCTAGTCCTGGTCCTTCGG | + |
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Preference number: 5 (lower is better) Translates to: GILRCWSRSVVTVDV*GPETCLRVLVLVLR Trigger: CCGAAGGACCAGGACTAGGACACGAAGGCAGGTTTCGGGACCTCAGACGTCTACAGTAACCACGCTGCGCGACCAACACCTAAGGATGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS CCA 72 bp | TTACTAAGCGTGCGTGCTGCGTGCCTGCGACACGCGTaGGGCCCGGGTAAGGCCCATCTCGAATCGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSVRAACLRHA*GPGKAHLESSQ Trigger: CTGCGACGATTCGAGATGGGCCTTACCCGGGCCCCACGCGTGTCGCAGGCACGCAGCACGCACGCTTAGTAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS GCA 72 bp | CACTACAGCTGGTGTTTACTAAGCGTGCGTGCTGCGTaGCTGCGACACGCGTGGGGCCCGGGTAAGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: HYSWCLLSVRAA*LRHAWGPGKAH Trigger: ATGGGCCTTACCCGGGCCCCACGCGTGTCGCAGGCACGCAGCACGCACGCTTAGTAAACACCAGCTGTAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS CCA 72 bp | CAACTGGCAGGGGGAAGTCAGACTTGGGTCTCAGTCTaGAGCCGGGGCATCCTTAGGTGTTGGTCGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QLAGGSQTWVSV*SRGILRCWSRS Trigger: GCTGCGCGACCAACACCTAAGGATGCCCCGGCTCCAGACTGAGACCCAAGTCTGACTTCCCCCTGCCAGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS TCA 72 bp | AGGTGTTGGTCGCGCAGCGTGGTTACTGTAGACGTCTaGGGTCCCGAAACCTGCCTTCGTGTCCTAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RCWSRSVVTVDV*GPETCLRVLVL Trigger: CAGGACTAGGACACGAAGGCAGGTTTCGGGACCTCAGACGTCTACAGTAACCACGCTGCGCGACCAACACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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| CDS CCA 72 bp | TCGAATCGTCGCAGCAACCAGGCAAGGAGCCTCAACTaGCAGGGGGAAGTCAGACTTGGGTCTCAGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SNRRSNQARSLN*QGEVRLGSQSG Trigger: TCCAGACTGAGACCCAAGTCTGACTTCCCCCTGCCAGTTGAGGCTCCTTGCCTGGTTGCTGCGACGATTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531538.1 |
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