Pregenerated sensors for LINC02756 (Homo sapiens)
Ensembl gene IDs: ENSG00000255332Ensembl transcript IDs: ENST00000525832.3, ENST00000577699.7, ENST00000581290.1, ENST00000652881.1, ENST00000655162.1, ENST00000661431.1, ENST00000669697.1, ENST00000671523.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCACAGGTCTGGCCTCTGTGCACAGCCAGGCACGCTGGCTGCTGTaGTGGGGCAGGCAGCTCCAGGTGCTGGCACAGGCACTGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: STGLASVHSQARWLL*WGRQLQVLAQALAP Trigger: TGGGGCCAGTGCCTGTGCCAGCACCTGGAGCTGCCTGCCCCACCACAGCAGCCAGCGTGCCTGGCTGTGCACAGAGGCCAGACCTGTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 90 bp | ACAGGTCTGGCCTCTGTGCACAGCCAGGCACGCTGGCTGCTGTGGTaGGGCAGGCAGCTCCAGGTGCTGGCACAGGCACTGGCCCCAATC | + |
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Preference number: 5 (lower is better) Translates to: TGLASVHSQARWLLW*GRQLQVLAQALAPI Trigger: GATTGGGGCCAGTGCCTGTGCCAGCACCTGGAGCTGCCTGCCCCACCACAGCAGCCAGCGTGCCTGGCTGTGCACAGAGGCCAGACCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 90 bp | CTCGGCGGCTGGTGGTGCCTCTGCTTGAGTCTTGCTCGCACCCACTaGGCTCGTTTTACCCACTTGGCCCAGCAGGCTGTGCTTGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: LGGWWCLCLSLARTH*ARFTHLAQQAVLGS Trigger: CGAGCCAAGCACAGCCTGCTGGGCCAAGTGGGTAAAACGAGCCCAGTGGGTGCGAGCAAGACTCAAGCAGAGGCACCACCAGCCGCCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 90 bp | CACCCACTGGGCTCGTTTTACCCACTTGGCCCAGCAGGCTGTGCTTaGCTCGTGCTACTGGCCGAGATCCCATGCCTGCCAAGGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: HPLGSFYPLGPAGCA*LVLLAEIPCLPRVS Trigger: GCTCACCCTTGGCAGGCATGGGATCTCGGCCAGTAGCACGAGCCAAGCACAGCCTGCTGGGCCAAGTGGGTAAAACGAGCCCAGTGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 90 bp | TCACCAGCCAGAAACCTCTGTGGCTGGTGGTGCCTCGGCGGCTGGTaGTGCCTCTGCTTGAGTCTTGCTCGCACCCACTGGGCTCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SPARNLCGWWCLGGW*CLCLSLARTHWARF Trigger: AAAACGAGCCCAGTGGGTGCGAGCAAGACTCAAGCAGAGGCACCACCAGCCGCCGAGGCACCACCAGCCACAGAGGTTTCTGGCTGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS TCA 90 bp | GGCAGCTCCAGGTGCTGGCACAGGCACTGGCCCCAATCAAGGCTGTaGCTGGACCAGATGTATTTCAAGCAGCCTCCACTGCAGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: GSSRCWHRHWPQSRL*LDQMYFKQPPLQAP Trigger: TGGTGCCTGCAGTGGAGGCTGCTTGAAATACATCTGGTCCAGTCACAGCCTTGATTGGGGCCAGTGCCTGTGCCAGCACCTGGAGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 90 bp | GCTCCAGGTGCTGGCACAGGCACTGGCCCCAATCAAGGCTGTGACTaGACCAGATGTATTTCAAGCAGCCTCCACTGCAGGCACCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: APGAGTGTGPNQGCD*TRCISSSLHCRHQH Trigger: ATGCTGGTGCCTGCAGTGGAGGCTGCTTGAAATACATCTGGTCCAGTCACAGCCTTGATTGGGGCCAGTGCCTGTGCCAGCACCTGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 90 bp | GCCATAGGATTCTTCAGGTGTTGCTTCACCAGCCAGAAACCTCTGTaGCTGGTGGTGCCTCGGCGGCTGGTGGTGCCTCTGCTTGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: AIGFFRCCFTSQKPL*LVVPRRLVVPLLES Trigger: AGACTCAAGCAGAGGCACCACCAGCCGCCGAGGCACCACCAGCCACAGAGGTTTCTGGCTGGTGAAGCAACACCTGAAGAATCCTATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 90 bp | CTCCAGATCCATGTCATTACTTTGCATTGGGCTGCAGATGAAAAATaGGAGGTACCTCTGATTGGTCCCCTCCTGCAACCAATCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LQIHVITLHWAADEK*EVPLIGPLLQPIRL Trigger: CAGCCTGATTGGTTGCAGGAGGGGACCAATCAGAGGTACCTCCCATTTTTCATCTGCAGCCCAATGCAAAGTAATGACATGGATCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000577699.7 ENST00000652881.1 ENST00000655162.1 ENST00000661431.1 ENST00000669697.1 ENST00000671523.1 |
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| CDS GCA 90 bp | TTTGTCTGTCGATGGACACTTAGGTTGCCTCCAAATCTTGGCCATTaGGAACAGTGTGCTCATGGTTCTCCTGCTCATGGTTCTTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: FVCRWTLRLPPNLGH*EQCAHGSPAHGSWF Trigger: GAACCAAGAACCATGAGCAGGAGAACCATGAGCACACTGTTCGCAATGGCCAAGATTTGGAGGCAACCTAAGTGTCCATCGACAGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CCA 90 bp | GGCCATTGCGAACAGTGTGCTCATGGTTCTCCTGCTCATGGTTCTTaGTTCCCACGGTTCTTCTCTGATGATTGTATGCAAGGAGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: GHCEQCAHGSPAHGS*FPRFFSDDCMQGVF Trigger: AAAGACTCCTTGCATACAATCATCAGAGAAGAACCGTGGGAACCAAGAACCATGAGCAGGAGAACCATGAGCACACTGTTCGCAATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS TCA 90 bp | AGAATCTCTCCAGATCCATGTCATTACTTTGCATTGGGCTGCAGATaGAAAATGGGAGGTACCTCTGATTGGTCCCCTCCTGCAACCAAT | + |
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Preference number: 5 (lower is better) Translates to: RISPDPCHYFALGCR*KMGGTSDWSPPATN Trigger: ATTGGTTGCAGGAGGGGACCAATCAGAGGTACCTCCCATTTTTCATCTGCAGCCCAATGCAAAGTAATGACATGGATCTGGAGAGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000525832.3 ENST00000577699.7 ENST00000652881.1 ENST00000655162.1 ENST00000661431.1 ENST00000669697.1 ENST00000671523.1 |
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| CDS CCA 90 bp | TCTCTCCTAAGAGAATCTCTCCAGATCCATGTCATTACTTTGCATTaGGCTGCAGATGAAAAATGGGAGGTACCTCTGATTGGTCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SLLRESLQIHVITLH*AADEKWEVPLIGPL Trigger: GAGGGGACCAATCAGAGGTACCTCCCATTTTTCATCTGCAGCCCAATGCAAAGTAATGACATGGATCTGGAGAGATTCTCTTAGGAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000525832.3 ENST00000577699.7 ENST00000652881.1 ENST00000655162.1 ENST00000661431.1 ENST00000669697.1 ENST00000671523.1 |
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| CDS CCA 90 bp | TGGGAAAGAATCCCAAAGAGCCTTTATTTTCCAGCTACAGGTAGATaGGTCACTTATCTTCTTCACTGGTGGCTCTCAGAGTTCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: WERIPKSLYFPATGR*VTYLLHWWLSEFSM Trigger: CATGCTGAACTCTGAGAGCCACCAGTGAAGAAGATAAGTGACCCATCTACCTGTAGCTGGAAAATAAAGGCTCTTTGGGATTCTTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS GCA 90 bp | AAGAAAATCCTCAGCAACCCTAAGGAATGCCCTTTTATTCTCTGGTaGAGACTTGTCCTTCCAGAAACCATCCACCACTTTCTTTCGATT | + |
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Preference number: 5 (lower is better) Translates to: KKILSNPKECPFILW*RLVLPETIHHFLSI Trigger: AATCGAAAGAAAGTGGTGGATGGTTTCTGGAAGGACAAGTCTGCACCAGAGAATAAAAGGGCATTCCTTAGGGTTGCTGAGGATTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000525832.3 ENST00000581290.1 ENST00000669697.1 |
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| CDS TCA 90 bp | TCTAAGTGGCCTTGCCAAATAGCACTCCCTGGCACTAATTTTGAATaGACATCTAAGGACATTCATGCTTTAGACAGAGTGAAGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: SKWPCQIALPGTNFE*TSKDIHALDRVKKR Trigger: TCTTTTCTTCACTCTGTCTAAAGCATGAATGTCCTTAGATGTTCATTCAAAATTAGTGCCAGGGAGTGCTATTTGGCAAGGCCACTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS TCA 90 bp | TCTCAGAGTTCAGCATGCATAAGGATCATCTTGGATGATTCTCTCTaGTTTCAGCACCCATATTCTTTTCATTGTAGCATCCATGTACCA | + |
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Preference number: 5 (lower is better) Translates to: SQSSACIRIILDDSL*FQHPYSFHCSIHVP Trigger: TGGTACATGGATGCTACAATGAAAAGAATATGGGTGCTGAAATCAGAGAGAATCATCCAAGATGATCCTTATGCATGCTGAACTCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CCA 90 bp | TCCTCTCTGAGTGTTTATTATGTATGTGTAAGTAGCATTTTGATGTaGTGGAGTGTTAAATGTTACGCAGTCTTGATGACAAAGACTAAA | + |
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Preference number: 5 (lower is better) Translates to: SSLSVYYVCVSSILM*WSVKCYAVLMTKTK Trigger: TTTAGTCTTTGTCATCAAGACTGCGTAACATTTAACACTCCACCACATCAAAATGCTACTTACACATACATAATAAACACTCAGAGAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS GCA 72 bp | CAGGTCTGGCCTCTGTGCACAGCCAGGCACGCTGGCTaGTGTGGTGGGGCAGGCAGCTCCAGGTGCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QVWPLCTARHAG*CGGAGSSRCWH Trigger: GTGCCAGCACCTGGAGCTGCCTGCCCCACCACAGCAGCCAGCGTGCCTGGCTGTGCACAGAGGCCAGACCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | GCCTCTGTGCACAGCCAGGCACGCTGGCTGCTGTGGTaGGGCAGGCAGCTCCAGGTGCTGGCACAGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: ASVHSQARWLLW*GRQLQVLAQAL Trigger: CAGTGCCTGTGCCAGCACCTGGAGCTGCCTGCCCCACCACAGCAGCCAGCGTGCCTGGCTGTGCACAGAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | CTGGCCTCTGTGCACAGCCAGGCACGCTGGCTGCTGTaGTGGGGCAGGCAGCTCCAGGTGCTGGCACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LASVHSQARWLL*WGRQLQVLAQA Trigger: TGCCTGTGCCAGCACCTGGAGCTGCCTGCCCCACCACAGCAGCCAGCGTGCCTGGCTGTGCACAGAGGCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | AGCACAGGTCTGGCCTCTGTGCACAGCCAGGCACGCTaGCTGCTGTGGTGGGGCAGGCAGCTCCAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: STGLASVHSQAR*LLWWGRQLQVL Trigger: CAGCACCTGGAGCTGCCTGCCCCACCACAGCAGCCAGCGTGCCTGGCTGTGCACAGAGGCCAGACCTGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS GCA 72 bp | GGCTGTGCTTGGCTCGTGCTACTGGCCGAGATCCCATaGCTGCCAAGGGTGAGCCAGGCACAGAGTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GCAWLVLLAEIP*LPRVSQAQSGE Trigger: CTCACCACTCTGTGCCTGGCTCACCCTTGGCAGGCATGGGATCTCGGCCAGTAGCACGAGCCAAGCACAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS GCA 72 bp | GTGCCTCGGCGGCTGGTGGTGCCTCTGCTTGAGTCTTaGTCGCACCCACTGGGCTCGTTTTACCCACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VPRRLVVPLLES*SHPLGSFYPLG Trigger: GCCAAGTGGGTAAAACGAGCCCAGTGGGTGCGAGCAAGACTCAAGCAGAGGCACCACCAGCCGCCGAGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | AGAAACCTCTGTGGCTGGTGGTGCCTCGGCGGCTGGTaGTGCCTCTGCTTGAGTCTTGCTCGCACCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: RNLCGWWCLGGW*CLCLSLARTHW Trigger: CCAGTGGGTGCGAGCAAGACTCAAGCAGAGGCACCACCAGCCGCCGAGGCACCACCAGCCACAGAGGTTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CAA 72 bp | GGGCTCGTTTTACCCACTTGGCCCAGCAGGCTGTGCTaGGCTCGTGCTACTGGCCGAGATCCCATGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GLVLPTWPSRLC*ARATGRDPMPA Trigger: GGCAGGCATGGGATCTCGGCCAGTAGCACGAGCCAAGCACAGCCTGCTGGGCCAAGTGGGTAAAACGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | GGCTCGTTTTACCCACTTGGCCCAGCAGGCTGTGCTTaGCTCGTGCTACTGGCCGAGATCCCATGCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSFYPLGPAGCA*LVLLAEIPCLP Trigger: TGGCAGGCATGGGATCTCGGCCAGTAGCACGAGCCAAGCACAGCCTGCTGGGCCAAGTGGGTAAAACGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | GGTGTTGCTTCACCAGCCAGAAACCTCTGTGGCTGGTaGTGCCTCGGCGGCTGGTGGTGCCTCTGCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: GVASPARNLCGW*CLGGWWCLCLS Trigger: ACTCAAGCAGAGGCACCACCAGCCGCCGAGGCACCACCAGCCACAGAGGTTTCTGGCTGGTGAAGCAACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | TCAGGTGTTGCTTCACCAGCCAGAAACCTCTGTGGCTaGTGGTGCCTCGGCGGCTGGTGGTGCCTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SGVASPARNLCG*WCLGGWWCLCL Trigger: CAAGCAGAGGCACCACCAGCCGCCGAGGCACCACCAGCCACAGAGGTTTCTGGCTGGTGAAGCAACACCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CAA 90 bp | CTCTGCTTGAGTCTTGCTCGCACCCACTGGGCTCGTTTTACCCACTaGGCCCAGCAGGCTGTGCTTGGCTCGTGCTACTGGCCGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: LCLSLARTHWARFTH*AQQAVLGSCYWPRS Trigger: GGATCTCGGCCAGTAGCACGAGCCAAGCACAGCCTGCTGGGCCAAGTGGGTAAAACGAGCCCAGTGGGTGCGAGCAAGACTCAAGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS GCA 72 bp | ACTGGGCTCGTTTTACCCACTTGGCCCAGCAGGCTGTaGTTGGCTCGTGCTACTGGCCGAGATCCCATGCCT | + |
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Preference number: 6 (lower is better) Translates to: TGLVLPTWPSRL*LARATGRDPMP Trigger: AGGCATGGGATCTCGGCCAGTAGCACGAGCCAAGCACAGCCTGCTGGGCCAAGTGGGTAAAACGAGCCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS GCA 72 bp | GTTGCTTCACCAGCCAGAAACCTCTGTGGCTGGTGGTaGCTCGGCGGCTGGTGGTGCCTCTGCTTGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VASPARNLCGWW*LGGWWCLCLSL Trigger: AAGACTCAAGCAGAGGCACCACCAGCCGCCGAGGCACCACCAGCCACAGAGGTTTCTGGCTGGTGAAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | TTCTTCAGGTGTTGCTTCACCAGCCAGAAACCTCTGTaGCTGGTGGTGCCTCGGCGGCTGGTGGTGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FFRCCFTSQKPL*LVVPRRLVVPL Trigger: CAGAGGCACCACCAGCCGCCGAGGCACCACCAGCCACAGAGGTTTCTGGCTGGTGAAGCAACACCTGAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | GCTGGCACAGGCACTGGCCCCAATCAAGGCTGTGACTaGACCAGATGTATTTCAAGCAGCCTCCACTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AGTGTGPNQGCD*TRCISSSLHCR Trigger: CCTGCAGTGGAGGCTGCTTGAAATACATCTGGTCCAGTCACAGCCTTGATTGGGGCCAGTGCCTGTGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS TCA 72 bp | AGGTGCTGGCACAGGCACTGGCCCCAATCAAGGCTGTaGCTGGACCAGATGTATTTCAAGCAGCCTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: RCWHRHWPQSRL*LDQMYFKQPPL Trigger: CAGTGGAGGCTGCTTGAAATACATCTGGTCCAGTCACAGCCTTGATTGGGGCCAGTGCCTGTGCCAGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS TCA 72 bp | TGCATTGGGCTGCAGATGAAAAATGGGAGGTACCTCTaGTTGGTCCCCTCCTGCAACCAATCAGGCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: CIGLQMKNGRYL*LVPSCNQSGWS Trigger: TGACCAGCCTGATTGGTTGCAGGAGGGGACCAATCAGAGGTACCTCCCATTTTTCATCTGCAGCCCAATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000577699.7 ENST00000655162.1 ENST00000661431.1 ENST00000671523.1 |
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| CDS CCA 72 bp | GCCTCCAAATCTTGGCCATTGCGAACAGTGTGCTCATaGTTCTCCTGCTCATGGTTCTTGGTTCCCACGGTT | + |
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Preference number: 6 (lower is better) Translates to: ASKSWPLRTVCS*FSCSWFLVPTV Trigger: AACCGTGGGAACCAAGAACCATGAGCAGGAGAACCATGAGCACACTGTTCGCAATGGCCAAGATTTGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS GCA 72 bp | CGATGGACACTTAGGTTGCCTCCAAATCTTGGCCATTaGGAACAGTGTGCTCATGGTTCTCCTGCTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: RWTLRLPPNLGH*EQCAHGSPAHG Trigger: ACCATGAGCAGGAGAACCATGAGCACACTGTTCGCAATGGCCAAGATTTGGAGGCAACCTAAGTGTCCATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CAA 72 bp | TTGTCTGTCGATGGACACTTAGGTTGCCTCCAAATCTaGGCCATTGCGAACAGTGTGCTCATGGTTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSVDGHLGCLQI*AIANSVLMVLL Trigger: CAGGAGAACCATGAGCACACTGTTCGCAATGGCCAAGATTTGGAGGCAACCTAAGTGTCCATCGACAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS GCA 72 bp | TGTGACTGGACCAGATGTATTTCAAGCAGCCTCCACTaGAGGCACCAGCATCTTGATTTTGGTGATGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: CDWTRCISSSLH*RHQHLDFGDGF Trigger: GAAACCATCACCAAAATCAAGATGCTGGTGCCTGCAGTGGAGGCTGCTTGAAATACATCTGGTCCAGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CCA 72 bp | CATGTCATTACTTTGCATTGGGCTGCAGATGAAAAATaGGAGGTACCTCTGATTGGTCCCCTCCTGCAACCA | + |
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Preference number: 6 (lower is better) Translates to: HVITLHWAADEK*EVPLIGPLLQP Trigger: TGGTTGCAGGAGGGGACCAATCAGAGGTACCTCCCATTTTTCATCTGCAGCCCAATGCAAAGTAATGACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000525832.3 ENST00000577699.7 ENST00000652881.1 ENST00000655162.1 ENST00000661431.1 ENST00000669697.1 ENST00000671523.1 |
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| CDS CAA 90 bp | TTTAACCATTTGTCTGTCGATGGACACTTAGGTTGCCTCCAAATCTaGGCCATTGCGAACAGTGTGCTCATGGTTCTCCTGCTCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: FNHLSVDGHLGCLQI*AIANSVLMVLLLMV Trigger: AACCATGAGCAGGAGAACCATGAGCACACTGTTCGCAATGGCCAAGATTTGGAGGCAACCTAAGTGTCCATCGACAGACAAATGGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CCA 72 bp | TCTTCTGGCCCTTCCTTCCCCATAGTTGATAGAAGCTaGGGCGAACACTTGACAAGTTATGTCAATCAGACT | + |
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Preference number: 6 (lower is better) Translates to: SSGPSFPIVDRS*GEHLTSYVNQT Trigger: AGTCTGATTGACATAACTTGTCAAGTGTTCGCCCCAGCTTCTATCAACTATGGGGAAGGAAGGGCCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525832.3 ENST00000655162.1 ENST00000661431.1 ENST00000669697.1 |
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| CDS GCA 72 bp | TTCTTTAACCATTTGTCTGTCGATGGACACTTAGGTTaGCTCCAAATCTTGGCCATTGCGAACAGTGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FFNHLSVDGHLG*LQILAIANSVL Trigger: GAGCACACTGTTCGCAATGGCCAAGATTTGGAGGCAACCTAAGTGTCCATCGACAGACAAATGGTTAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CCA 72 bp | ATCCCAAAGAGCCTTTATTTTCCAGCTACAGGTAGATaGGTCACTTATCTTCTTCACTGGTGGCTCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: IPKSLYFPATGR*VTYLLHWWLSE Trigger: CTCTGAGAGCCACCAGTGAAGAAGATAAGTGACCCATCTACCTGTAGCTGGAAAATAAAGGCTCTTTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CAA 90 bp | TCCTCAGCAACCCTAAGGAATGCCCTTTTATTCTCTGGTGCAGACTaGTCCTTCCAGAAACCATCCACCACTTTCTTTCGATTGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SSATLRNALLFSGAD*SFQKPSTTFFRLFI Trigger: TATGAACAATCGAAAGAAAGTGGTGGATGGTTTCTGGAAGGACAAGTCTGCACCAGAGAATAAAAGGGCATTCCTTAGGGTTGCTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000525832.3 ENST00000581290.1 ENST00000669697.1 |
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| CDS CAA 90 bp | GGTGCAGACTTGTCCTTCCAGAAACCATCCACCACTTTCTTTCGATaGTTCATAGTCCACTTTCTCTTGATTTTGGTGATGGTTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: GADLSFQKPSTTFFR*FIVHFLLILVMVSQ Trigger: CTGTGAAACCATCACCAAAATCAAGAGAAAGTGGACTATGAACAATCGAAAGAAAGTGGTGGATGGTTTCTGGAAGGACAAGTCTGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000525832.3 ENST00000581290.1 ENST00000669697.1 |
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| CDS CAA 90 bp | GATGTATTTCAAGCAGCCTCCACTGCAGGCACCAGCATCTTGATTTaGGTGATGGTTTCACAGATGTATGTGTATCTCCAAACTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: DVFQAASTAGTSILI*VMVSQMYVYLQTHQ Trigger: TTGATGAGTTTGGAGATACACATACATCTGTGAAACCATCACCAAAATCAAGATGCTGGTGCCTGCAGTGGAGGCTGCTTGAAATACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS TCA 72 bp | CCTTGCCAAATAGCACTCCCTGGCACTAATTTTGAATaGACATCTAAGGACATTCATGCTTTAGACAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: PCQIALPGTNFE*TSKDIHALDRV Trigger: CACTCTGTCTAAAGCATGAATGTCCTTAGATGTTCATTCAAAATTAGTGCCAGGGAGTGCTATTTGGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS TCA 72 bp | TCAGCATGCATAAGGATCATCTTGGATGATTCTCTCTaGTTTCAGCACCCATATTCTTTTCATTGTAGCATC | + |
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Preference number: 6 (lower is better) Translates to: SACIRIILDDSL*FQHPYSFHCSI Trigger: GATGCTACAATGAAAAGAATATGGGTGCTGAAATCAGAGAGAATCATCCAAGATGATCCTTATGCATGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CCA 72 bp | TTAAATCCGTTATATCTCAATGTCGACCACAGTGTCTaGTACACAGCTAATGTTCAGTTAATTATTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LNPLYLNVDHSV*YTANVQLIIGP Trigger: AGGCCCAATAATTAACTGAACATTAGCTGTGTACCAGACACTGTGGTCGACATTGAGATATAACGGATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671523.1 |
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| CDS CAA 90 bp | CAGCATTCCTCTCTGAGTGTTTATTATGTATGTGTAAGTAGCATTTaGATGTGGTGGAGTGTTAAATGTTACGCAGTCTTGATGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: QHSSLSVYYVCVSSI*MWWSVKCYAVLMTK Trigger: CTTTGTCATCAAGACTGCGTAACATTTAACACTCCACCACATCAAAATGCTACTTACACATACATAATAAACACTCAGAGAGGAATGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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| CDS CAA 72 bp | TCTCTGAGTGTTTATTATGTATGTGTAAGTAGCATTTaGATGTGGTGGAGTGTTAAATGTTACGCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLSVYYVCVSSI*MWWSVKCYAVL Trigger: CAAGACTGCGTAACATTTAACACTCCACCACATCAAAATGCTACTTACACATACATAATAAACACTCAGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577699.7 ENST00000652881.1 |
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