Pregenerated sensors for LINC02741 (Homo sapiens)
Ensembl gene IDs: ENSG00000255388Ensembl transcript IDs: ENST00000526978.5, ENST00000531210.1, ENST00000655470.1, ENST00000657598.1, ENST00000665237.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATCATCTCAAAGGCAAAGAGAGCAGCCTTCACCAGACACCAAACCTaGTGGTCCTTGACTTTAAATTTCCCAGCCTTCAGAGCTGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: IISKAKRAAFTRHQT*WSLTLNFPAFRAEG Trigger: GCCTTCAGCTCTGAAGGCTGGGAAATTTAAAGTCAAGGACCACCAGGTTTGGTGTCTGGTGAAGGCTGCTCTCTTTGCCTTTGAGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS TCA 90 bp | ATCTATGAAGCAGGCTTTCCAGGGACAATCAATCTGTCAGCATCTTaGCCTTGGACATCCCAGCCTCCAGAAACTCTACTTGTCTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: IYEAGFPGTINLSAS*PWTSQPPETLLVFA Trigger: AGCAAAGACAAGTAGAGTTTCTGGAGGCTGGGATGTCCAAGGTCAAGATGCTGACAGATTGATTGTCCCTGGAAAGCCTGCTTCATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526978.5 ENST00000665237.1 |
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| CDS GCA 90 bp | TGGTCCTTGACTTTAAATTTCCCAGCCTTCAGAGCTGAAGGCATCTaGAATATGACAGGGTCAGTGTTTGAAGGGCATTTTCTACCCACT | + |
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Preference number: 5 (lower is better) Translates to: WSLTLNFPAFRAEGI*NMTGSVFEGHFLPT Trigger: AGTGGGTAGAAAATGCCCTTCAAACACTGACCCTGTCATATTGCAGATGCCTTCAGCTCTGAAGGCTGGGAAATTTAAAGTCAAGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS CCA 90 bp | CAGTCTCTCAATTGTTTTCACTTTGAAAGTCTTGCACAAGCAACCTaGAACATTTTTCTTCACTTCCATCCACACCATGCCAATCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: QSLNCFHFESLAQAT*NIFLHFHPHHANLQ Trigger: CTGCAGATTGGCATGGTGTGGATGGAAGTGAAGAAAAATGTTCCAGGTTGCTTGTGCAAGACTTTCAAAGTGAAAACAATTGAGAGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS TCA 90 bp | CTTGGTTTACATAGGGACATCACCTGGAACATGTTCACTTCTAGATaGTCTGGGTATAGTTTCAGATGTCTTGTGAGTACAGTAGCATAC | + |
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Preference number: 5 (lower is better) Translates to: LGLHRDITWNMFTSR*SGYSFRCLVSTVAY Trigger: GTATGCTACTGTACTCACAAGACATCTGAAACTATACCCAGATCATCTAGAAGTGAACATGTTCCAGGTGATGTCCCTATGTAAACCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000526978.5 ENST00000655470.1 ENST00000657598.1 ENST00000665237.1 |
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| CDS TCA 90 bp | CTTGTGAGTACAGTAGCATACCTCACACATGCATCCAAAATCAGGTaGTGTGTAATTCCCTCTCCTTGTGACCAAAAGAATGTGGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: LVSTVAYLTHASKIR*CVIPSPCDQKNVVK Trigger: TTTTACCACATTCTTTTGGTCACAAGGAGAGGGAATTACACATCACCTGATTTTGGATGCATGTGTGAGGTATGCTACTGTACTCACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS GCA 90 bp | CAACCTGGAACATTTTTCTTCACTTCCATCCACACCATGCCAATCTaGAGTATGATGATATTAGAATGTAGGACCTTCTGGATGTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: QPGTFFFTSIHTMPI*SMMILECRTFWMLC Trigger: ACACAACATCCAGAAGGTCCTACATTCTAATATCATCATACTGCAGATTGGCATGGTGTGGATGGAAGTGAAGAAAAATGTTCCAGGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000526978.5 ENST00000655470.1 ENST00000665237.1 |
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| CDS CCA 90 bp | TTTGAAGTGAGTTCCATTTTGTTGGAGTGTAATTGTAGGTACCGTTaGCTGCATCTAAATCACATTCTTCAACACTTGACTGGCCATGAA | + |
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Preference number: 5 (lower is better) Translates to: FEVSSILLECNCRYR*LHLNHILQHLTGHE Trigger: TTCATGGCCAGTCAAGTGTTGAAGAATGTGATTTAGATGCAGCCAACGGTACCTACAATTACACTCCAACAAAATGGAACTCACTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS GCA 90 bp | GATTTAGGTATTTTCTCCATACATCTCTCATATGAGGACCCAAGCTaGAGTATGATGATATTAGAATGTAGGACCTTCTGGATGTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: DLGIFSIHLSYEDPS*SMMILECRTFWMLC Trigger: ACACAACATCCAGAAGGTCCTACATTCTAATATCATCATACTGCAGCTTGGGTCCTCATATGAGAGATGTATGGAGAAAATACCTAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531210.1 |
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| CDS TCA 90 bp | TTCATCTGTGATTTCCATGCATCAGTCTCTCAATTGTTTTCACTTTaGAAGTCTTGCACAAGCAACCTGGAACATTTTTCTTCACTTCCA | + |
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Preference number: 5 (lower is better) Translates to: FICDFHASVSQLFSL*KSCTSNLEHFSSLP Trigger: TGGAAGTGAAGAAAAATGTTCCAGGTTGCTTGTGCAAGACTTTCAAAGTGAAAACAATTGAGAGACTGATGCATGGAAATCACAGATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS TCA 72 bp | GCAGGCTTTCCAGGGACAATCAATCTGTCAGCATCTTaGCCTTGGACATCCCAGCCTCCAGAAACTCTACTT | + |
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Preference number: 6 (lower is better) Translates to: AGFPGTINLSAS*PWTSQPPETLL Trigger: AAGTAGAGTTTCTGGAGGCTGGGATGTCCAAGGTCAAGATGCTGACAGATTGATTGTCCCTGGAAAGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526978.5 ENST00000665237.1 |
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| CDS CAA 72 bp | AGCAGGCTTTCCAGGGACAATCAATCTGTCAGCATCTaGACCTTGGACATCCCAGCCTCCAGAACACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SRLSRDNQSVSI*TLDIPASRTLK Trigger: TTTCAGTGTTCTGGAGGCTGGGATGTCCAAGGTCAAGATGCTGACAGATTGATTGTCCCTGGAAAGCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531210.1 ENST00000655470.1 |
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| CDS CAA 90 bp | AAGGCAAAGAGAGCAGCCTTCACCAGACACCAAACCTGGTGGTCCTaGACTTTAAATTTCCCAGCCTTCAGAGCTGAAGGCATCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: KAKRAAFTRHQTWWS*TLNFPAFRAEGICN Trigger: ATTGCAGATGCCTTCAGCTCTGAAGGCTGGGAAATTTAAAGTCAAGGACCACCAGGTTTGGTGTCTGGTGAAGGCTGCTCTCTTTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS CCA 72 bp | AAGGCAAAGAGAGCAGCCTTCACCAGACACCAAACCTaGTGGTCCTTGACTTTAAATTTCCCAGCCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: KAKRAAFTRHQT*WSLTLNFPAFR Trigger: TCTGAAGGCTGGGAAATTTAAAGTCAAGGACCACCAGGTTTGGTGTCTGGTGAAGGCTGCTCTCTTTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS CAA 90 bp | CTTGACCTTGGACATCCCAGCCTCCAGAACACTGAAAACCAACCCTaGGTTTACATAGGGACATCACCTGGAACATGTTCACTTCTAGAT | + |
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Preference number: 6 (lower is better) Translates to: LDLGHPSLQNTENQP*VYIGTSPGTCSLLD Trigger: ATCTAGAAGTGAACATGTTCCAGGTGATGTCCCTATGTAAACCAAGGGTTGGTTTTCAGTGTTCTGGAGGCTGGGATGTCCAAGGTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655470.1 |
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| CDS TCA 72 bp | CACCATCTCTTCTGTGGTAAGACAGAAGAGGTAGCGTaGGTGGAGTACAAATGTATGGGACTCAATGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HHLFCGKTEEVA*VEYKCMGLNVQ Trigger: CTGGACATTGAGTCCCATACATTTGTACTCCACTCACGCTACCTCTTCTGTCTTACCACAGAAGAGATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655470.1 |
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| CDS CAA 72 bp | CTTTCCAGGGACAATCAATCTGTCAGCATCTTGACCTaGGACATCCCAGCCTCCAGAAACTCTACTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSRDNQSVSILT*DIPASRNSTCL Trigger: AAGACAAGTAGAGTTTCTGGAGGCTGGGATGTCCAAGGTCAAGATGCTGACAGATTGATTGTCCCTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526978.5 ENST00000665237.1 |
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| CDS TCA 72 bp | TGTCCAGGGGTATTGCTGCTTAGTTCACCTCCCATGTaGCACTGGGCAAGACATTTAAAATTGCTGACTATC | + |
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Preference number: 6 (lower is better) Translates to: CPGVLLLSSPPM*HWARHLKLLTI Trigger: GATAGTCAGCAATTTTAAATGTCTTGCCCAGTGTCACATGGGAGGTGAACTAAGCAGCAATACCCCTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655470.1 |
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| CDS GCA 72 bp | ACTTTAAATTTCCCAGCCTTCAGAGCTGAAGGCATCTaGAATATGACAGGGTCAGTGTTTGAAGGGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: TLNFPAFRAEGI*NMTGSVFEGHF Trigger: AAAATGCCCTTCAAACACTGACCCTGTCATATTGCAGATGCCTTCAGCTCTGAAGGCTGGGAAATTTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS GCA 72 bp | CATGGACTACAATTTGAATGTGTGTCCCCTCCCAGATaGACATTGAAGCTTCATCCTGATTGTGGTAGTATA | + |
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Preference number: 6 (lower is better) Translates to: HGLQFECVSPPR*TLKLHPDCGSI Trigger: TATACTACCACAATCAGGATGAAGCTTCAATGTGCATCTGGGAGGGGACACACATTCAAATTGTAGTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS CCA 72 bp | AGCTGCAGTATGATGATATTAGAATGTAGGACCTTCTaGATGTTGTGTTATGAGAATGGAGCCCTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SCSMMILECRTF*MLCYENGALRN Trigger: GTTCCTGAGGGCTCCATTCTCATAACACAACATCCAGAAGGTCCTACATTCTAATATCATCATACTGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531210.1 |
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| CDS CCA 72 bp | CTCACTTTTCACTTTGAAAGTCTTGCACAAGCAACCTaGAACATTTTTCTTCACTTCCATCCACACCATGCC | + |
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Preference number: 6 (lower is better) Translates to: LTFHFESLAQAT*NIFLHFHPHHA Trigger: GGCATGGTGTGGATGGAAGTGAAGAAAAATGTTCCAGGTTGCTTGTGCAAGACTTTCAAAGTGAAAAGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655470.1 ENST00000665237.1 |
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| CDS CAA 72 bp | CTACAATTTGAATGTGTGTCCCCTCCCAGATGCACATaGAAGCTTCATCCTGATTGTGGTAGTATAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQFECVSPPRCT*KLHPDCGSIKR Trigger: CCTCTTTATACTACCACAATCAGGATGAAGCTTCAATGTGCATCTGGGAGGGGACACACATTCAAATTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657598.1 |
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| CDS TCA 72 bp | CATAGGGACATCACCTGGAACATGTTCACTTCTAGATaGTCTGGGTATAGTTTCAGATGTCTTGTGAGTACA | + |
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Preference number: 6 (lower is better) Translates to: HRDITWNMFTSR*SGYSFRCLVST Trigger: TGTACTCACAAGACATCTGAAACTATACCCAGATCATCTAGAAGTGAACATGTTCCAGGTGATGTCCCTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000526978.5 ENST00000655470.1 ENST00000657598.1 ENST00000665237.1 |
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| CDS CCA 72 bp | ATCTGCAGTATGATGATATTAGAATGTAGGACCTTCTaGATGTTGTGTTATGAGAATGGAGCCCTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ICSMMILECRTF*MLCYENGALRN Trigger: GTTCCTGAGGGCTCCATTCTCATAACACAACATCCAGAAGGTCCTACATTCTAATATCATCATACTGCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000526978.5 ENST00000655470.1 ENST00000665237.1 |
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| CDS CAA 72 bp | TACCGTTGGCTGCATCTAAATCACATTCTTCAACACTaGACTGGCCATGAAGGTGGTATTTTCATCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: YRWLHLNHILQH*TGHEGGIFIFI Trigger: GATGAAGATGAAAATACCACCTTCATGGCCAGTCAAGTGTTGAAGAATGTGATTTAGATGCAGCCAACGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS CAA 90 bp | AATTGTAGGTACCGTTGGCTGCATCTAAATCACATTCTTCAACACTaGACTGGCCATGAAGGTGGTATTTTCATCTTCATCTGTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: NCRYRWLHLNHILQH*TGHEGGIFIFICDF Trigger: GAAATCACAGATGAAGATGAAAATACCACCTTCATGGCCAGTCAAGTGTTGAAGAATGTGATTTAGATGCAGCCAACGGTACCTACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS GCA 72 bp | ACATTTTTCTTCACTTCCATCCACACCATGCCAATCTaGAGTATGATGATATTAGAATGTAGGACCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TFFFTSIHTMPI*SMMILECRTFW Trigger: CCAGAAGGTCCTACATTCTAATATCATCATACTGCAGATTGGCATGGTGTGGATGGAAGTGAAGAAAAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000526978.5 ENST00000655470.1 ENST00000665237.1 |
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| CDS GCA 72 bp | ATTTTCTCCATACATCTCTCATATGAGGACCCAAGCTaGAGTATGATGATATTAGAATGTAGGACCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: IFSIHLSYEDPS*SMMILECRTFW Trigger: CCAGAAGGTCCTACATTCTAATATCATCATACTGCAGCTTGGGTCCTCATATGAGAGATGTATGGAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531210.1 |
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| CDS CCA 72 bp | AATTGTTTTCACTTTGAAAGTCTTGCACAAGCAACCTaGAACATTTTTCTTCACTTCCATCCACACCATGCC | + |
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Preference number: 6 (lower is better) Translates to: NCFHFESLAQAT*NIFLHFHPHHA Trigger: GGCATGGTGTGGATGGAAGTGAAGAAAAATGTTCCAGGTTGCTTGTGCAAGACTTTCAAAGTGAAAACAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS CCA 72 bp | CTGTTTCTGCTATCAATTTTGGATATTGCCCACCAGTaGTTAATTGACTTTTTACCTGAAGGCATCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LFLLSILDIAHQ*LIDFLPEGICN Trigger: ATTGCAGATGCCTTCAGGTAAAAAGTCAATTAACCACTGGTGGGCAATATCCAAAATTGATAGCAGAAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS CCA 72 bp | AGTTCCATTTTGTTGGAGTGTAATTGTAGGTACCGTTaGCTGCATCTAAATCACATTCTTCAACACTTGACT | + |
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Preference number: 6 (lower is better) Translates to: SSILLECNCRYR*LHLNHILQHLT Trigger: AGTCAAGTGTTGAAGAATGTGATTTAGATGCAGCCAACGGTACCTACAATTACACTCCAACAAAATGGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526978.5 |
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| CDS CAA 72 bp | ATATTAGGGTTCCCTCAATTTGGCTCACTTTTCACTTaGAAAGTCTTGCACAAGCAACCTGGAACATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: ILGFPQFGSLFT*KVLHKQPGTFF Trigger: GAAAAATGTTCCAGGTTGCTTGTGCAAGACTTTCAAAGTGAAAAGTGAGCCAAATTGAGGGAACCCTAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655470.1 ENST00000665237.1 |
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| CDS CAA 90 bp | TTAGAAATTATATTAGGGTTCCCTCAATTTGGCTCACTTTTCACTTaGAAAGTCTTGCACAAGCAACCTGGAACATTTTTCTTCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LEIILGFPQFGSLFT*KVLHKQPGTFFFTS Trigger: GGAAGTGAAGAAAAATGTTCCAGGTTGCTTGTGCAAGACTTTCAAAGTGAAAAGTGAGCCAAATTGAGGGAACCCTAATATAATTTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655470.1 ENST00000665237.1 |
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| CDS TCA 72 bp | GATAGATTTAGGTATTTTCTCCATACATCTCTCATATaGGGACCCAAGCTGCAGTATGATGATATTAGAATG | + |
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Preference number: 6 (lower is better) Translates to: DRFRYFLHTSLI*GPKLQYDDIRM Trigger: CATTCTAATATCATCATACTGCAGCTTGGGTCCTCATATGAGAGATGTATGGAGAAAATACCTAAATCTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531210.1 |
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| CDS TCA 72 bp | CTCAGATGTTTTTCAATGGTTAAAACATGGAGTGGCTaGACAAACTGTGAATGGTCATGGTTAAACAAATTG | + |
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Preference number: 6 (lower is better) Translates to: LRCFSMVKTWSG*TNCEWSWLNKL Trigger: CAATTTGTTTAACCATGACCATTCACAGTTTGTTCAGCCACTCCATGTTTTAACCATTGAAAAACATCTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655470.1 |
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