Pregenerated sensors for LINC02740 (Homo sapiens)
Ensembl gene IDs: ENSG00000255109Ensembl transcript IDs: ENST00000525641.5, ENST00000527757.2, ENST00000530387.5, ENST00000657748.1, ENST00000662615.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 72 bp | CTCACAGTTCTGGAGGCTGAAAGTTCAAAATCAGGGTaGCAGCATGATTGGGTTCTGGGAGGGTTATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTVLEAESSKSG*QHDWVLGGLSS Trigger: GGAAGATAACCCTCCCAGAACCCAATCATGCTGGCACCCTGATTTTGAACTTTCAGCCTCCAGAACTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525641.5 |
||
| CDS CAA 90 bp | GTTCTGGGAGGGTTATCTTCCAGATTGCAGATTGTTGAATTCCTCTaGTATCCTCGCATAGCAGAAAGAAGGCTCTCTGGGACCCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VLGGLSSRLQIVEFL*YPRIAERRLSGTPC Trigger: ACAGGGGGTCCCAGAGAGCCTTCTTTCTGCTATGCGAGGATACAAGAGGAATTCAACAATCTGCAATCTGGAAGATAACCCTCCCAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525641.5 |
||
| CDS GCA 72 bp | TATCTGTCACTCTGCTCCAGTAACTGTGACTTCTCTTaGTGTTCCCTAAACAAAGCACGAATATTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: YLSLCSSNCDFS*CSLNKARIFLS Trigger: GGACAAGAATATTCGTGCTTTGTTTAGGGAACAGCAAGAGAAGTCACAGTTACTGGAGCAGAGTGACAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530387.5 |
||
| CDS CCA 72 bp | AAAGTTCAAAATCAGGGTGCCAGCATGATTGGGTTCTaGGAGGGTTATCTTCCAGATTGCAGATTGTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KVQNQGASMIGF*EGYLPDCRLLN Trigger: ATTCAACAATCTGCAATCTGGAAGATAACCCTCCCAGAACCCAATCATGCTGGCACCCTGATTTTGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525641.5 |
||
| CDS CCA 72 bp | ATTTCTCTGTCTCAGATTAACTTGCGCTTTAAACTTTaGTCTTCTAGCCCAGTCAATCCTCAACTGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ISLSQINLRFKL*SSSPVNPQLPQ Trigger: CTGTGGCAGTTGAGGATTGACTGGGCTAGAAGACCAAAGTTTAAAGCGCAAGTTAATCTGAGACAGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657748.1 |
||
| CDS CAA 90 bp | AACTGTGACTTCTCTTGCTGTTCCCTAAACAAAGCACGAATATTCTaGTCCCAGAATCTTTGTACTAGATCTCAAGACATACGAAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: NCDFSCCSLNKARIF*SQNLCTRSQDIRRD Trigger: ATCCCTTCGTATGTCTTGAGATCTAGTACAAAGATTCTGGGACAAGAATATTCGTGCTTTGTTTAGGGAACAGCAAGAGAAGTCACAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530387.5 |
||
| CDS CAA 72 bp | GAAGAGTCAAAGAGATCAGCCTTAATTATTGAGTACTaGCTTAAAGGACAAACCACCACCTGTTGTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EESKRSALIIEY*LKGQTTTCCAS Trigger: AGAAGCACAACAGGTGGTGGTTTGTCCTTTAAGCAAGTACTCAATAATTAAGGCTGATCTCTTTGACTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530387.5 |
||
| CDS GCA 72 bp | ATGAAAATTATTTTCTATCCCATCCCGCAGTCCTGTTaGTTCTTGATCCCTTCTTATACTGGAGAGAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: MKIIFYPIPQSC*FLIPSYTGERL Trigger: TAATCTCTCTCCAGTATAAGAAGGGATCAAGAAGCAACAGGACTGCGGGATGGGATAGAAAATAATTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527757.2 |
||
| CDS CAA 72 bp | TTCTCTTGCTGTTCCCTAAACAAAGCACGAATATTCTaGTCCCAGAATCTTTGTACTAGATCTCAAGACATA | + |
|
Preference number: 6 (lower is better) Translates to: FSCCSLNKARIF*SQNLCTRSQDI Trigger: TATGTCTTGAGATCTAGTACAAAGATTCTGGGACAAGAATATTCGTGCTTTGTTTAGGGAACAGCAAGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530387.5 |
||
| CDS TCA 72 bp | GACTTTATTGATGCTTCAACAGACGAAGAGCAGAAATaGACTTGCAAAACTGTACAAATTTCAATAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: DFIDASTDEEQK*TCKTVQISIES Trigger: GCTTTCTATTGAAATTTGTACAGTTTTGCAAGTTCATTTCTGCTCTTCGTCTGTTGAAGCATCAATAAAGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657748.1 ENST00000662615.1 |
||