Pregenerated sensors for LINC02726 (Homo sapiens)
Ensembl gene IDs: ENSG00000255193Ensembl transcript IDs: ENST00000534068.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCTCGCCAAGAAAGGAGCTGGGCACAGGGAATCAGCTCCGGGAGTaGTGTGTTGGCGGCCAGGGAAGGCCCTGCGGGGCTTGTTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: ASPRKELGTGNQLRE*CVGGQGRPCGACSA Trigger: CGCGGAACAAGCCCCGCAGGGCCTTCCCTGGCCGCCAACACACCACTCCCGGAGCTGATTCCCTGTGCCCAGCTCCTTTCTTGGCGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS CCA 90 bp | GCCCGCCGGGCCCTCGTTTCCTCGCTGCCTCTCTCCAGCTTCCTCTaGGTTCTGTCACTTCTCGGTGTCTACCTGTCTCCGGCTAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: ARRALVSSLPLSSFL*VLSLLGVYLSPASA Trigger: AGCGCTAGCCGGAGACAGGTAGACACCGAGAAGTGACAGAACCCAGAGGAAGCTGGAGAGAGGCAGCGAGGAAACGAGGGCCCGGCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS GCA 90 bp | TCTCTTTTTCTCTCTCCTGCCTTCTGCGTTGGTCTTGCTGGGTGCTaGAGACCGGAGCCGTTCCTATTTGGCCATCTGGTGCTGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: SLFLSPAFCVGLAGC*RPEPFLFGHLVLRT Trigger: GGTCCTCAGCACCAGATGGCCAAATAGGAACGGCTCCGGTCTGCAGCACCCAGCAAGACCAACGCAGAAGGCAGGAGAGAGAAAAAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS GCA 90 bp | CTTTCTCTTTTTCTCTCTCCTGCCTTCTGCGTTGGTCTTGCTGGGTaGTGCAGACCGGAGCCGTTCCTATTTGGCCATCTGGTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LSLFLSPAFCVGLAG*CRPEPFLFGHLVLR Trigger: CCTCAGCACCAGATGGCCAAATAGGAACGGCTCCGGTCTGCAGCACCCAGCAAGACCAACGCAGAAGGCAGGAGAGAGAAAAAGAGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS CCA 72 bp | GCTGGGCACAGGGAATCAGCTCCGGGAGTGGTGTGTTaGCGGCCAGGGAAGGCCCTGCGGGGCTTGTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: AGHRESAPGVVC*RPGKALRGLFR Trigger: GCGGAACAAGCCCCGCAGGGCCTTCCCTGGCCGCCAACACACCACTCCCGGAGCTGATTCCCTGTGCCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS CAA 72 bp | AGCTGGGCACAGGGAATCAGCTCCGGGAGTGGTGTGTaGGCGGCCAGGGAAGGCCCTGCGGGGCTTGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: SWAQGISSGSGV*AAREGPAGLVP Trigger: CGGAACAAGCCCCGCAGGGCCTTCCCTGGCCGCCAACACACCACTCCCGGAGCTGATTCCCTGTGCCCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS CCA 72 bp | AGAAAGGAGCTGGGCACAGGGAATCAGCTCCGGGAGTaGTGTGTTGGCGGCCAGGGAAGGCCCTGCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RKELGTGNQLRE*CVGGQGRPCGA Trigger: AGCCCCGCAGGGCCTTCCCTGGCCGCCAACACACCACTCCCGGAGCTGATTCCCTGTGCCCAGCTCCTTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS CCA 72 bp | CCGACTAAGGGACTGAAGCCTCGCCAAGAAAGGAGCTaGGCACAGGGAATCAGCTCCGGGAGTGGTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PTKGLKPRQERS*AQGISSGSGVL Trigger: CAACACACCACTCCCGGAGCTGATTCCCTGTGCCCAGCTCCTTTCTTGGCGAGGCTTCAGTCCCTTAGTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS CCA 72 bp | GCCCTCGTTTCCTCGCTGCCTCTCTCCAGCTTCCTCTaGGTTCTGTCACTTCTCGGTGTCTACCTGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ALVSSLPLSSFL*VLSLLGVYLSP Trigger: CGGAGACAGGTAGACACCGAGAAGTGACAGAACCCAGAGGAAGCTGGAGAGAGGCAGCGAGGAAACGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS CCA 72 bp | TCTTTTTCTCTCTCCTGCCTTCTGCGTTGGTCTTGCTaGGTGCTGCAGACCGGAGCCGTTCCTATTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SFSLSCLLRWSC*VLQTGAVPIWP Trigger: TGGCCAAATAGGAACGGCTCCGGTCTGCAGCACCCAGCAAGACCAACGCAGAAGGCAGGAGAGAGAAAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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| CDS GCA 72 bp | TTATCTCTCTTTCTTCCTTTCTCTTTTTCTCTCTCCTaGCTTCTGCGTTGGTCTTGCTGGGTGCTGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: LSLFLPFSFSLS*LLRWSCWVLQT Trigger: GGTCTGCAGCACCCAGCAAGACCAACGCAGAAGGCAGGAGAGAGAAAAAGAGAAAGGAAGAAAGAGAGATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534068.1 |
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