Pregenerated sensors for LINC02713 (Homo sapiens)
Ensembl gene IDs: ENSG00000255502Ensembl transcript IDs: ENST00000526385.5, ENST00000527281.1, ENST00000653025.1, ENST00000665262.1, ENST00000667244.1, ENST00000667368.1, ENST00000667954.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGATAACACAGAGAGTTCAGAGATGCCACTACAGGGGTTCTACCTaGATGAAGCTCAGAGCAGACTATTTCCAACTCTTTTTGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LITQRVQRCHYRGST*MKLRADYFQLFLVL Trigger: CAGCACCAAAAAGAGTTGGAAATAGTCTGCTCTGAGCTTCATGCAGGTAGAACCCCTGTAGTGGCATCTCTGAACTCTCTGTGTTATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667368.1 |
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| CDS CCA 90 bp | TGTGGCGACTGTAGGAAGCATTTTCTAGTTTGCCGTCTAATAAAGTaGATGCATCCCAGAAGCAGGAAGAGGCAAAAATGGATTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CGDCRKHFLVCRLIK*MHPRSRKRQKWILP Trigger: AGGAAGAATCCATTTTTGCCTCTTCCTGCTTCTGGGATGCATCCACTTTATTAGACGGCAAACTAGAAAATGCTTCCTACAGTCGCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000526385.5 ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS TCA 90 bp | TCAATGATATGTGAATTCAGTGTCTCCTACTGCCCCACCCTACTTTaGGCATTCTTTCTTCAATTAAGATCACCTTCCACCTTGGCATGG | + |
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Preference number: 5 (lower is better) Translates to: SMICEFSVSYCPTLL*AFFLQLRSPSTLAW Trigger: CCATGCCAAGGTGGAAGGTGATCTTAATTGAAGAAAGAATGCTCAAAGTAGGGTGGGGCAGTAGGAGACACTGAATTCACATATCATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667368.1 |
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| CDS GCA 90 bp | CACCTTGGCATGGCCAGAAAAGAAAACCTGTTGCATTGCTCTTTCTaGTCAATTCTCACATCATTGGCACCGATGATAATTTGTTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: HLGMARKENLLHCSF*SILTSLAPMIICLA Trigger: TGCCAAACAAATTATCATCGGTGCCAATGATGTGAGAATTGAGCAGAAAGAGCAATGCAACAGGTTTTCTTTTCTGGCCATGCCAAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS CCA 90 bp | ACAGAAACAGAATGGGAATTATGCTGCCATAAGTCAAGGAATGCTTaGGGTTACCAGAAGCAGGAAGAGGCAAAAATGGATTCTTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: TETEWELCCHKSRNA*GYQKQEEAKMDSSL Trigger: TAAGGAAGAATCCATTTTTGCCTCTTCCTGCTTCTGGTAACCCCAAGCATTCCTTGACTTATGGCAGCATAATTCCCATTCTGTTTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667244.1 |
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| CDS TCA 72 bp | GAGTTCAGAGATGCCACTACAGGGGTTCTACCTGCATaGAGCTCAGAGCAGACTATTTCCAACTCTTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: EFRDATTGVLPA*SSEQTISNSFW Trigger: CCAAAAAGAGTTGGAAATAGTCTGCTCTGAGCTTCATGCAGGTAGAACCCCTGTAGTGGCATCTCTGAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667368.1 |
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| CDS GCA 72 bp | CAGAGAGTTCAGAGATGCCACTACAGGGGTTCTACCTaGATGAAGCTCAGAGCAGACTATTTCCAACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QRVQRCHYRGST*MKLRADYFQLF Trigger: AAAGAGTTGGAAATAGTCTGCTCTGAGCTTCATGCAGGTAGAACCCCTGTAGTGGCATCTCTGAACTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667368.1 |
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| CDS GCA 72 bp | CTTTTGGGAAATCTGATAACACAGAGAGTTCAGAGATaGCACTACAGGGGTTCTACCTGCATGAAGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLGNLITQRVQR*HYRGSTCMKLR Trigger: TCTGAGCTTCATGCAGGTAGAACCCCTGTAGTGGCATCTCTGAACTCTCTGTGTTATCAGATTTCCCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667368.1 |
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| CDS CAA 90 bp | GATCACCTTCCACCTTGGCATGGCCAGAAAAGAAAACCTGTTGCATaGCTCTTTCTGCTCAATTCTCACATCATTGGCACCGATGATAAT | + |
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Preference number: 6 (lower is better) Translates to: DHLPPWHGQKRKPVA*LFLLNSHIIGTDDN Trigger: ATTATCATCGGTGCCAATGATGTGAGAATTGAGCAGAAAGAGCAATGCAACAGGTTTTCTTTTCTGGCCATGCCAAGGTGGAAGGTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS TCA 72 bp | TCACAGTTGCAAAGGCTGGGAAGCCCAAGATCAAGGTaGAGTTTGATTCAGTTCCTTATGAGGACTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SQLQRLGSPRSR*SLIQFLMRTFS Trigger: AGAGAAAGTCCTCATAAGGAACTGAATCAAACTTCACCTTGATCTTGGGCTTCCCAGCCTTTGCAACTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000526385.5 ENST00000653025.1 ENST00000667368.1 |
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| CDS TCA 72 bp | TGTGAATTCAGTGTCTCCTACTGCCCCACCCTACTTTaGGCATTCTTTCTTCAATTAAGATCACCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CEFSVSYCPTLL*AFFLQLRSPST Trigger: GGTGGAAGGTGATCTTAATTGAAGAAAGAATGCTCAAAGTAGGGTGGGGCAGTAGGAGACACTGAATTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667368.1 |
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| CDS CAA 72 bp | TTGTGGCAATTCATAACAGTAGACAGTTGCGCATGGTaGGGGAGACCTCAGGAAACTTATAATCATGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LWQFITVDSCAW*GRPQETYNHGG Trigger: TCCACCATGATTATAAGTTTCCTGAGGTCTCCCCAACCATGCGCAACTGTCTACTGTTATGAATTGCCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667244.1 |
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| CDS GCA 72 bp | TTTTTATGTGGCGACTGTAGGAAGCATTTTCTAGTTTaGCGTCTAATAAAGTGGATGCATCCCAGAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: FLCGDCRKHFLV*RLIKWMHPRSR Trigger: CCTGCTTCTGGGATGCATCCACTTTATTAGACGGCAAACTAGAAAATGCTTCCTACAGTCGCCACATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000526385.5 ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS CCA 72 bp | TGTAGGAAGCATTTTCTAGTTTGCCGTCTAATAAAGTaGATGCATCCCAGAAGCAGGAAGAGGCAAAAATGG | + |
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Preference number: 6 (lower is better) Translates to: CRKHFLVCRLIK*MHPRSRKRQKW Trigger: CCATTTTTGCCTCTTCCTGCTTCTGGGATGCATCCACTTTATTAGACGGCAAACTAGAAAATGCTTCCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000526385.5 ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS CAA 90 bp | AAGGTGAAGTTTGATTCAGTTCCTTATGAGGACTTTCTCTCTGGTTaGCAGATGGCTGTCTTCTCACTTGTTCTCAAGATATGTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KVKFDSVPYEDFLSG*QMAVFSLVLKICVL Trigger: CAACACACATATCTTGAGAACAAGTGAGAAGACAGCCATCTGCAAACCAGAGAGAAAGTCCTCATAAGGAACTGAATCAAACTTCACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000526385.5 ENST00000653025.1 ENST00000667368.1 |
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| CDS CAA 90 bp | GGTTCTACCTGCATGAAGCTCAGAGCAGACTATTTCCAACTCTTTTaGGTGCTGCTGAAAACCAACAATAATTTGAGTTACCTGATCACA | + |
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Preference number: 6 (lower is better) Translates to: GSTCMKLRADYFQLF*VLLKTNNNLSYLIT Trigger: TGTGATCAGGTAACTCAAATTATTGTTGGTTTTCAGCAGCACCAAAAAGAGTTGGAAATAGTCTGCTCTGAGCTTCATGCAGGTAGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667368.1 |
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| CDS GCA 72 bp | ATGGCCAGAAAAGAAAACCTGTTGCATTGCTCTTTCTaGTCAATTCTCACATCATTGGCACCGATGATAATT | + |
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Preference number: 6 (lower is better) Translates to: MARKENLLHCSF*SILTSLAPMII Trigger: AATTATCATCGGTGCCAATGATGTGAGAATTGAGCAGAAAGAGCAATGCAACAGGTTTTCTTTTCTGGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS CCA 72 bp | TTCTTTCTTCAATTAAGATCACCTTCCACCTTGGCATaGCCAGAAAAGAAAACCTGTTGCATTGCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FFLQLRSPSTLA*PEKKTCCIALS Trigger: AGAAAGAGCAATGCAACAGGTTTTCTTTTCTGGCCATGCCAAGGTGGAAGGTGATCTTAATTGAAGAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS CAA 72 bp | TTTGATTCAGTTCCTTATGAGGACTTTCTCTCTGGTTaGCAGATGGCTGTCTTCTCACTTGTTCTCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: FDSVPYEDFLSG*QMAVFSLVLKI Trigger: TATCTTGAGAACAAGTGAGAAGACAGCCATCTGCAAACCAGAGAGAAAGTCCTCATAAGGAACTGAATCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000526385.5 ENST00000653025.1 ENST00000667368.1 |
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| CDS TCA 72 bp | AATGTAACTGAGGTAGAAATTAAGATGAAATCATGGTaGATCAGAGTGGACCTTAAATCCAGTGACAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: NVTEVEIKMKSW*IRVDLKSSDSV Trigger: GACACTGTCACTGGATTTAAGGTCCACTCTGATTCACCATGATTTCATCTTAATTTCTACCTCAGTTACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667244.1 |
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| CDS TCA 72 bp | ATCAGATTAAATAATCTAAAGCCAACCACAGTGGGTTaGATTGTTTCCCTCCAGAATTTAAGTCTACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IRLNNLKPTTVG*IVSLQNLSLPG Trigger: ACCTGGTAGACTTAAATTCTGGAGGGAAACAATTCAACCCACTGTGGTTGGCTTTAGATTATTTAATCTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667244.1 |
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| CDS CAA 72 bp | CTGCTCAATTCTCACATCATTGGCACCGATGATAATTaGTTTGGCATGATGATAATTCTTTTTATGTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LLNSHIIGTDDN*FGMMIILFMWR Trigger: TCGCCACATAAAAAGAATTATCATCATGCCAAACAAATTATCATCGGTGCCAATGATGTGAGAATTGAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000527281.1 ENST00000653025.1 ENST00000665262.1 ENST00000667368.1 ENST00000667954.1 |
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| CDS CAA 72 bp | TTTCTGAGCAGCAATGTACATGCTGGTAAGTATTTGTaGATAAGACATAGCATTGCCTACTTTGAGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: FLSSNVHAGKYL*IRHSIAYFEHS Trigger: AGAATGCTCAAAGTAGGCAATGCTATGTCTTATCAACAAATACTTACCAGCATGTACATTGCTGCTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653025.1 ENST00000665262.1 |
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| CDS CAA 90 bp | TCAAATGTGTTTCTGAGCAGCAATGTACATGCTGGTAAGTATTTGTaGATAAGACATAGCATTGCCTACTTTGAGCATTCTTTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: SNVFLSSNVHAGKYL*IRHSIAYFEHSFFN Trigger: ATTGAAGAAAGAATGCTCAAAGTAGGCAATGCTATGTCTTATCAACAAATACTTACCAGCATGTACATTGCTGCTCAGAAACACATTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653025.1 ENST00000665262.1 |
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| CDS CAA 72 bp | TATATAGCTGTACTTCTGAAACTGCACATACCTACTTaGAGCATTCTTTCTTCAATTAAGATCACCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: YIAVLLKLHIPT*SILSSIKITFH Trigger: GTGGAAGGTGATCTTAATTGAAGAAAGAATGCTCAAAGTAGGTATGTGCAGTTTCAGAAGTACAGCTATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527281.1 |
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