Pregenerated sensors for LINC02687 (Homo sapiens)
Ensembl gene IDs: ENSG00000255267Ensembl transcript IDs: ENST00000528390.1, ENST00000664257.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGCTGACCTGGCTGCTTCTTGCAAATAAGCGGGGCCTGCTGCACTaGGAGGGCACCGAGAAGAAAGAGCTGCCATCAACCCTGCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: GLTWLLLANKRGLLH*EGTEKKELPSTLPG Trigger: ACCCGGCAGGGTTGATGGCAGCTCTTTCTTCTCGGTGCCCTCGCAGTGCAGCAGGCCCCGCTTATTTGCAAGAAGCAGCCAGGTCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 90 bp | ATGGGCTTGGGAATGGAGCACACCTGCCTCCCCAGTCTGGCTCTCTaGCCTTTAATAATCGTGTCCCTGGGCCGGACGCGGTGGCTCACG | + |
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Preference number: 5 (lower is better) Translates to: MGLGMEHTCLPSLAL*PLIIVSLGRTRWLT Trigger: CGTGAGCCACCGCGTCCGGCCCAGGGACACGATTATTAAAGGGCAGAGAGCCAGACTGGGGAGGCAGGTGTGCTCCATTCCCAAGCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 90 bp | AAGGACCCGCAGCTGGAGGGTACAACCAGACAGGCTTCACACCATTaGCTTTCTTCCAACGCAAGGGGCTGCCTTGGAGGGAGCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: KDPQLEGTTRQASHH*LSSNARGCLGGSQA Trigger: GGCCTGGCTCCCTCCAAGGCAGCCCCTTGCGTTGGAAGAAAGGCAATGGTGTGAAGCCTGTCTGGTTGTACCCTCCAGCTGCGGGTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 90 bp | GGAAGCAAAGCACCTACTGTCTTCCCGGCAGAGCCAGGGCAAGCATaGGCTTGGGAATGGAGCACACCTGCCTCCCCAGTCTGGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GSKAPTVFPAEPGQA*AWEWSTPASPVWLS Trigger: AGAGAGCCAGACTGGGGAGGCAGGTGTGCTCCATTCCCAAGCCCATGCTTGCCCTGGCTCTGCCGGGAAGACAGTAGGTGCTTTGCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 90 bp | TTGGCAGGCAGTTTACCAGACATCCAAGCACCAAACGGGGCCATGTaGATCTGGCCTGGTCGTCTGTACAGCTGGAGGAGCCACGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LAGSLPDIQAPNGAM*IWPGRLYSWRSHAS Trigger: AGAGGCGTGGCTCCTCCAGCTGTACAGACGACCAGGCCAGATCCACATGGCCCCGTTTGGTGCTTGGATGTCTGGTAAACTGCCTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS TCA 90 bp | ATCTGGCCTGGTCGTCTGTACAGCTGGAGGAGCCACGCCTCTTCCTaGCCTTTCTCAGGAAGCAAAGCACCTACTGTCTTCCCGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: IWPGRLYSWRSHASS*PFSGSKAPTVFPAE Trigger: CTCTGCCGGGAAGACAGTAGGTGCTTTGCTTCCTGAGAAAGGTCAGGAAGAGGCGTGGCTCCTCCAGCTGTACAGACGACCAGGCCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 90 bp | ACAGGCTTCACACCATTGCCTTTCTTCCAACGCAAGGGGCTGCCTTaGAGGGAGCCAGGCCTCCATCCCAGGAGTCAGTCAAGTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: TGFTPLPFFQRKGLP*REPGLHPRSQSSEM Trigger: CATCTCACTTGACTGACTCCTGGGATGGAGGCCTGGCTCCCTCCAAGGCAGCCCCTTGCGTTGGAAGAAAGGCAATGGTGTGAAGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 90 bp | TCCTTCTCCACTGTGGTGGCTCCTTCTGTGAAGGGTACCGGAATCTaGGTCAGGTCTTGGCCTCAGAGGTGGCTGATCCTAAAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFSTVVAPSVKGTGI*VRSWPQRWLILKGR Trigger: CCTGCCCTTTAGGATCAGCCACCTCTGAGGCCAAGACCTGACCCAGATTCCGGTACCCTTCACAGAAGGAGCCACCACAGTGGAGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS TCA 90 bp | CAACGCCGTTCGCAACAGGCTCACCCCCTCCTCCTCCTCCTCTCTTaGATGGAAGGACCCAGAGGAAAAGAGAGAGCTCTGAAATGTGCG | + |
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Preference number: 5 (lower is better) Translates to: QRRSQQAHPLLLLLS*MEGPRGKERALKCA Trigger: CGCACATTTCAGAGCTCTCTCTTTTCCTCTGGGTCCTTCCATTCAAGAGAGGAGGAGGAGGAGGGGGTGAGCCTGTTGCGAACGGCGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 90 bp | TTTACCAGACATCCAAGCACCAAACGGGGCCATGTGGATCTGGCCTaGTCGTCTGTACAGCTGGAGGAGCCACGCCTCTTCCTGACCTTT | + |
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Preference number: 5 (lower is better) Translates to: FTRHPSTKRGHVDLA*SSVQLEEPRLFLTF Trigger: AAAGGTCAGGAAGAGGCGTGGCTCCTCCAGCTGTACAGACGACCAGGCCAGATCCACATGGCCCCGTTTGGTGCTTGGATGTCTGGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 90 bp | TCTGTGAAGGGTACCGGAATCTGGGTCAGGTCTTGGCCTCAGAGGTaGCTGATCCTAAAGGGCAGGAGACTGTGTTTCCTCAGGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: SVKGTGIWVRSWPQR*LILKGRRLCFLRCL Trigger: CAGGCACCTGAGGAAACACAGTCTCCTGCCCTTTAGGATCAGCCACCTCTGAGGCCAAGACCTGACCCAGATTCCGGTACCCTTCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 90 bp | GTGGTGGCTCCTTCTGTGAAGGGTACCGGAATCTGGGTCAGGTCTTaGCCTCAGAGGTGGCTGATCCTAAAGGGCAGGAGACTGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: VVAPSVKGTGIWVRS*PQRWLILKGRRLCF Trigger: GAAACACAGTCTCCTGCCCTTTAGGATCAGCCACCTCTGAGGCCAAGACCTGACCCAGATTCCGGTACCCTTCACAGAAGGAGCCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS TCA 90 bp | GGAGTCAGTCAAGTGAGATGGGTCAACAGGCGATTCAGCGTGAAATaGTGGGTCGGACCAGGTGCTTCACCTCTGCGTTCCTCCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: GVSQVRWVNRRFSVK*WVGPGASPLRSSLA Trigger: TGCCAAGGAGGAACGCAGAGGTGAAGCACCTGGTCCGACCCATCATTTCACGCTGAATCGCCTGTTGACCCATCTCACTTGACTGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 90 bp | TGCTGCACTGCGAGGGCACCGAGAAGAAAGAGCTGCCATCAACCCTaGCGGGTTTTTCTCAGATCCTCTGAAAACGAATCTCCTGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: CCTARAPRRKSCHQP*RVFLRSSENESPGS Trigger: GCTCCCAGGAGATTCGTTTTCAGAGGATCTGAGAAAAACCCGGCAGGGTTGATGGCAGCTCTTTCTTCTCGGTGCCCTCGCAGTGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 90 bp | TTAGGAGTGGGGAGGATGCTACATGGTGAGAGACAGGGCCTTAGGTaGCCCATCCCCTTCCATCAGAGGCGCTTCCCTGGTGTTTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: LGVGRMLHGERQGLR*PIPFHQRRFPGVCL Trigger: TAAACAAACACCAGGGAAGCGCCTCTGATGGAAGGGGATGGGGCACCTAAGGCCCTGTCTCTCACCATGTAGCATCCTCCCCACTCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 90 bp | TGCCGTCACCCTTTGCGAGCTCTTCCTCCTTTTCAAAGAGGCTCTTaGCCAAAAGCCATGAGCTTCCTTCTCCACTGTGGTGGCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CRHPLRALPPFQRGS*PKAMSFLLHCGGSF Trigger: GAAGGAGCCACCACAGTGGAGAAGGAAGCTCATGGCTTTTGGGCAAGAGCCTCTTTGAAAAGGAGGAAGAGCTCGCAAAGGGTGACGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS TCA 90 bp | TGCGAGCTCTTCCTCCTTTTCAAAGAGGCTCTTGCCCAAAAGCCATaGGCTTCCTTCTCCACTGTGGTGGCTCCTTCTGTGAAGGGTACC | + |
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Preference number: 5 (lower is better) Translates to: CELFLLFKEALAQKP*ASFSTVVAPSVKGT Trigger: GGTACCCTTCACAGAAGGAGCCACCACAGTGGAGAAGGAAGCTCATGGCTTTTGGGCAAGAGCCTCTTTGAAAAGGAGGAAGAGCTCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 90 bp | TCCTTCCTCCTGCAAGATTCTGGGCATCTCTCTGCCGTCACCCTTTaGGAGCTCTTCCTCCTTTTCAAAGAGGCTCTTGCCCAAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SFLLQDSGHLSAVTL*ELFLLFKEALAQKP Trigger: TGGCTTTTGGGCAAGAGCCTCTTTGAAAAGGAGGAAGAGCTCGCAAAGGGTGACGGCAGAGAGATGCCCAGAATCTTGCAGGAGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 90 bp | TGGCTCTTACTCACACGTCTCCTGAATCCTTCCAGCAAGTTAGGCTaGATTCTCCTTCCTCCTGCAAGATTCTGGGCATCTCTCTGCCGT | + |
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Preference number: 5 (lower is better) Translates to: WLLLTRLLNPSSKLG*ILLPPARFWASLCR Trigger: ACGGCAGAGAGATGCCCAGAATCTTGCAGGAGGAAGGAGAATGCAGCCTAACTTGCTGGAAGGATTCAGGAGACGTGTGAGTAAGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528390.1 ENST00000664257.1 |
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| CDS CCA 90 bp | GCAGGTTGGGTAGAAAGCTGTGCTTATCTTGGCTGTAGGCTGATCTaGGAAATCTTGGCTCTTACTCACACGTCTCCTGAATCCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: AGWVESCAYLGCRLI*EILALTHTSPESFQ Trigger: CTGGAAGGATTCAGGAGACGTGTGAGTAAGAGCCAAGATTTCCCAGATCAGCCTACAGCCAAGATAAGCACAGCTTTCTACCCAACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528390.1 ENST00000664257.1 |
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| CDS CCA 72 bp | GCACCTACTGTCTTCCCGGCAGAGCCAGGGCAAGCATaGGCTTGGGAATGGAGCACACCTGCCTCCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: APTVFPAEPGQA*AWEWSTPASPV Trigger: GACTGGGGAGGCAGGTGTGCTCCATTCCCAAGCCCATGCTTGCCCTGGCTCTGCCGGGAAGACAGTAGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | GGAATGGAGCACACCTGCCTCCCCAGTCTGGCTCTCTaGCCTTTAATAATCGTGTCCCTGGGCCGGACGCGG | + |
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Preference number: 6 (lower is better) Translates to: GMEHTCLPSLAL*PLIIVSLGRTR Trigger: CCGCGTCCGGCCCAGGGACACGATTATTAAAGGGCAGAGAGCCAGACTGGGGAGGCAGGTGTGCTCCATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | CCAGACATCCAAGCACCAAACGGGGCCATGTGGATCTaGCCTGGTCGTCTGTACAGCTGGAGGAGCCACGCC | + |
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Preference number: 6 (lower is better) Translates to: PDIQAPNGAMWI*PGRLYSWRSHA Trigger: GGCGTGGCTCCTCCAGCTGTACAGACGACCAGGCCAGATCCACATGGCCCCGTTTGGTGCTTGGATGTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | GGGAGGATGCTACATGGTGAGAGACAGGGCCTTAGGTaGCCCATCCCCTTCCATCAGAGGCGCTTCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GRMLHGERQGLR*PIPFHQRRFPG Trigger: ACCAGGGAAGCGCCTCTGATGGAAGGGGATGGGGCACCTAAGGCCCTGTCTCTCACCATGTAGCATCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | GCTTCACACCATTGCCTTTCTTCCAACGCAAGGGGCTaGCTTGGAGGGAGCCAGGCCTCCATCCCAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASHHCLSSNARG*LGGSQASIPGV Trigger: GACTCCTGGGATGGAGGCCTGGCTCCCTCCAAGGCAGCCCCTTGCGTTGGAAGAAAGGCAATGGTGTGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | CATCCAAGCACCAAACGGGGCCATGTGGATCTGGCCTaGTCGTCTGTACAGCTGGAGGAGCCACGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HPSTKRGHVDLA*SSVQLEEPRLF Trigger: GAAGAGGCGTGGCTCCTCCAGCTGTACAGACGACCAGGCCAGATCCACATGGCCCCGTTTGGTGCTTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CAA 72 bp | CACACCATTGCCTTTCTTCCAACGCAAGGGGCTGCCTaGGAGGGAGCCAGGCCTCCATCCCAGGAGTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: HTIAFLPTQGAA*EGARPPSQESV Trigger: GACTGACTCCTGGGATGGAGGCCTGGCTCCCTCCAAGGCAGCCCCTTGCGTTGGAAGAAAGGCAATGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | ACACCATTGCCTTTCTTCCAACGCAAGGGGCTGCCTTaGAGGGAGCCAGGCCTCCATCCCAGGAGTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TPLPFFQRKGLP*REPGLHPRSQS Trigger: TGACTGACTCCTGGGATGGAGGCCTGGCTCCCTCCAAGGCAGCCCCTTGCGTTGGAAGAAAGGCAATGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | GCCTGCTGCACTGCGAGGGCACCGAGAAGAAAGAGCTaGCATCAACCCTGCCGGGTTTTTCTCAGATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ACCTARAPRRKS*HQPCRVFLRSS Trigger: AGAGGATCTGAGAAAAACCCGGCAGGGTTGATGGCAGCTCTTTCTTCTCGGTGCCCTCGCAGTGCAGCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | TGGCTGCTTCTTGCAAATAAGCGGGGCCTGCTGCACTaGGAGGGCACCGAGAAGAAAGAGCTGCCATCAACC | + |
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Preference number: 6 (lower is better) Translates to: WLLLANKRGLLH*EGTEKKELPST Trigger: GGTTGATGGCAGCTCTTTCTTCTCGGTGCCCTCGCAGTGCAGCAGGCCCCGCTTATTTGCAAGAAGCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | GCCAGGGCAAGCATGGGCTTGGGAATGGAGCACACCTaGCTCCCCAGTCTGGCTCTCTGCCCTTTAATAATC | + |
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Preference number: 6 (lower is better) Translates to: ARASMGLGMEHT*LPSLALCPLII Trigger: GATTATTAAAGGGCAGAGAGCCAGACTGGGGAGGCAGGTGTGCTCCATTCCCAAGCCCATGCTTGCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | CAGCTGGAGGGTACAACCAGACAGGCTTCACACCATTaGCTTTCTTCCAACGCAAGGGGCTGCCTTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: QLEGTTRQASHH*LSSNARGCLGG Trigger: CCCTCCAAGGCAGCCCCTTGCGTTGGAAGAAAGGCAATGGTGTGAAGCCTGTCTGGTTGTACCCTCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CAA 72 bp | GCAGCTGGAGGGTACAACCAGACAGGCTTCACACCATaGCCTTTCTTCCAACGCAAGGGGCTGCCTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AAGGYNQTGFTP*PFFQRKGLPWR Trigger: CCTCCAAGGCAGCCCCTTGCGTTGGAAGAAAGGCAATGGTGTGAAGCCTGTCTGGTTGTACCCTCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS TCA 72 bp | TCGCAACAGGCTCACCCCCTCCTCCTCCTCCTCTCTTaGATGGAAGGACCCAGAGGAAAAGAGAGAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SQQAHPLLLLLS*MEGPRGKERAL Trigger: CAGAGCTCTCTCTTTTCCTCTGGGTCCTTCCATTCAAGAGAGGAGGAGGAGGAGGGGGTGAGCCTGTTGCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | AGTTTACCAGACATCCAAGCACCAAACGGGGCCATGTaGATCTGGCCTGGTCGTCTGTACAGCTGGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SLPDIQAPNGAM*IWPGRLYSWRS Trigger: GCTCCTCCAGCTGTACAGACGACCAGGCCAGATCCACATGGCCCCGTTTGGTGCTTGGATGTCTGGTAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | CCTTCTGTGAAGGGTACCGGAATCTGGGTCAGGTCTTaGCCTCAGAGGTGGCTGATCCTAAAGGGCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PSVKGTGIWVRS*PQRWLILKGRR Trigger: TCTCCTGCCCTTTAGGATCAGCCACCTCTGAGGCCAAGACCTGACCCAGATTCCGGTACCCTTCACAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS TCA 72 bp | GGTCGTCTGTACAGCTGGAGGAGCCACGCCTCTTCCTaGCCTTTCTCAGGAAGCAAAGCACCTACTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GRLYSWRSHASS*PFSGSKAPTVF Trigger: GAAGACAGTAGGTGCTTTGCTTCCTGAGAAAGGTCAGGAAGAGGCGTGGCTCCTCCAGCTGTACAGACGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS TCA 72 bp | CAAGTGAGATGGGTCAACAGGCGATTCAGCGTGAAATaGTGGGTCGGACCAGGTGCTTCACCTCTGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: QVRWVNRRFSVK*WVGPGASPLRS Trigger: GGAACGCAGAGGTGAAGCACCTGGTCCGACCCATCATTTCACGCTGAATCGCCTGTTGACCCATCTCACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CAA 90 bp | CTGCCGTCACCCTTTGCGAGCTCTTCCTCCTTTTCAAAGAGGCTCTaGCCCAAAAGCCATGAGCTTCCTTCTCCACTGTGGTGGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LPSPFASSSSFSKRL*PKSHELPSPLWWLL Trigger: AAGGAGCCACCACAGTGGAGAAGGAAGCTCATGGCTTTTGGGCAAGAGCCTCTTTGAAAAGGAGGAAGAGCTCGCAAAGGGTGACGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CAA 90 bp | CTCCTTCCTCCTGCAAGATTCTGGGCATCTCTCTGCCGTCACCCTTaGCGAGCTCTTCCTCCTTTTCAAAGAGGCTCTTGCCCAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLPPARFWASLCRHP*RALPPFQRGSCPKA Trigger: GGCTTTTGGGCAAGAGCCTCTTTGAAAAGGAGGAAGAGCTCGCAAAGGGTGACGGCAGAGAGATGCCCAGAATCTTGCAGGAGGAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | CTGCAAGATTCTGGGCATCTCTCTGCCGTCACCCTTTaGGAGCTCTTCCTCCTTTTCAAAGAGGCTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LQDSGHLSAVTL*ELFLLFKEALA Trigger: GGCAAGAGCCTCTTTGAAAAGGAGGAAGAGCTCGCAAAGGGTGACGGCAGAGAGATGCCCAGAATCTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | GCGAGGGCACCGAGAAGAAAGAGCTGCCATCAACCCTaGCGGGTTTTTCTCAGATCCTCTGAAAACGAATCT | + |
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Preference number: 6 (lower is better) Translates to: ARAPRRKSCHQP*RVFLRSSENES Trigger: AGATTCGTTTTCAGAGGATCTGAGAAAAACCCGGCAGGGTTGATGGCAGCTCTTTCTTCTCGGTGCCCTCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | CCCCTGGATTCTTTATTAGATGGCTCGGCGAAAACCTaGACCCAGATGAATGGAGAGAAGGCAGCAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PLDSLLDGSAKT*TQMNGEKAAGR Trigger: TCTGCCTGCTGCCTTCTCTCCATTCATCTGGGTCCAGGTTTTCGCCGAGCCATCTAATAAAGAATCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS GCA 72 bp | CTCACACGTCTCCTGAATCCTTCCAGCAAGTTAGGCTaGATTCTCCTTCCTCCTGCAAGATTCTGGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: LTRLLNPSSKLG*ILLPPARFWAS Trigger: AGATGCCCAGAATCTTGCAGGAGGAAGGAGAATGCAGCCTAACTTGCTGGAAGGATTCAGGAGACGTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528390.1 ENST00000664257.1 |
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| CDS CAA 72 bp | GCTTCCCTGGTGTTTGTTTACACGGCCAGGTTAGGCTaGCGATTTTGGATGGAGGAAAGGGTTATGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASLVFVYTARLG*RFWMEERVMQL Trigger: CAGCTGCATAACCCTTTCCTCCATCCAAAATCGCAAGCCTAACCTGGCCGTGTAAACAAACACCAGGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CAA 90 bp | ATCAGAGGCGCTTCCCTGGTGTTTGTTTACACGGCCAGGTTAGGCTaGCGATTTTGGATGGAGGAAAGGGTTATGCAGCTGAAAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: IRGASLVFVYTARLG*RFWMEERVMQLKES Trigger: GCTTTCTTTCAGCTGCATAACCCTTTCCTCCATCCAAAATCGCAAGCCTAACCTGGCCGTGTAAACAAACACCAGGGAAGCGCCTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | GTGTTTGTTTACACGGCCAGGTTAGGCTTGCGATTTTaGATGGAGGAAAGGGTTATGCAGCTGAAAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: VFVYTARLGLRF*MEERVMQLKES Trigger: GCTTTCTTTCAGCTGCATAACCCTTTCCTCCATCCAAAATCGCAAGCCTAACCTGGCCGTGTAAACAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528390.1 |
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| CDS CCA 72 bp | GTAGAAAGCTGTGCTTATCTTGGCTGTAGGCTGATCTaGGAAATCTTGGCTCTTACTCACACGTCTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VESCAYLGCRLI*EILALTHTSPE Trigger: TTCAGGAGACGTGTGAGTAAGAGCCAAGATTTCCCAGATCAGCCTACAGCCAAGATAAGCACAGCTTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528390.1 ENST00000664257.1 |
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| CDS CCA 72 bp | AAAAATAACCATACATTATTGCTACAATATACAGGATaGCTGAGTGATTCTTCCATTCTCTGTGGTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: KNNHTLLLQYTG*LSDSSILCGEV Trigger: CACCTCACCACAGAGAATGGAAGAATCACTCAGCCATCCTGTATATTGTAGCAATAATGTATGGTTATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000528390.1 ENST00000664257.1 |
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