Pregenerated sensors for LINC02680 (Homo sapiens)
Ensembl gene IDs: ENSG00000285737Ensembl transcript IDs: ENST00000649291.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTCAGCTAGGGAAGGATTTGCTTCCCAATTCCTTTTGGCAGCAATaGGCTCCATGTGGCTTTAGGAGTTCTGGCAGCTTGCTTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: AQLGKDLLPNSFWQQ*APCGFRSSGSLLLH Trigger: GTGAAGAAGCAAGCTGCCAGAACTCCTAAAGCCACATGGAGCTCATTGCTGCCAAAAGGAATTGGGAAGCAAATCCTTCCCTAGCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 90 bp | CCTCCAAGAGAGCTCACACTTGGAGGTCTACGGGACAGAGTAATTTaGCACTGTAGCAAGAACTATCAACAGTACCTTGTAGGTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: PPRELTLGGLRDRVI*HCSKNYQQYLVGEE Trigger: TTCTTCACCTACAAGGTACTGTTGATAGTTCTTGCTACAGTGTCAAATTACTCTGTCCCGTAGACCTCCAAGTGTGAGCTCTCTTGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 90 bp | TTTGCTCAAATAAATGTCAGACACCAAACCACAAATCCAGGAAGCTaGGAGGGCACCAAGCAGGATAAATCTCTCTCTCTCTTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FAQINVRHQTTNPGS*EGTKQDKSLSLFLS Trigger: AGAAAGAAAGAGAGAGAGAGATTTATCCTGCTTGGTGCCCTCTCAGCTTCCTGGATTTGTGGTTTGGTGTCTGACATTTATTTGAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 90 bp | TCATTGCTTTCTGTAATGAAGTTTCCATCTGTCATTACCGTACCCTaGGCTTTCAGCTTTAGATTTGTAGTGTTGATGAGCTGGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SLLSVMKFPSVITVP*AFSFRFVVLMSWQK Trigger: TTTTTGCCAGCTCATCAACACTACAAATCTAAAGCTGAAAGCTCAGGGTACGGTAATGACAGATGGAAACTTCATTACAGAAAGCAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 90 bp | ACAGATTACAGTGGTAATGGAGAAGTTCAGGTTTTAACGAAGACCTaGACTAAGGATAAGGAACTCTATTTATGTATGCCAAGATGTGGA | + |
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Preference number: 5 (lower is better) Translates to: TDYSGNGEVQVLTKT*TKDKELYLCMPRCG Trigger: TCCACATCTTGGCATACATAAATAGAGTTCCTTATCCTTAGTTCAGGTCTTCGTTAAAACCTGAACTTCTCCATTACCACTGTAATCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 90 bp | ACATTTAATATGTTGTTCCATTATCTCTGGGCTCCACTGCTCAAATaGGATATAAGACACCATCTGTATCCTTGTTCCTTTGGCTATTTT | + |
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Preference number: 5 (lower is better) Translates to: TFNMLFHYLWAPLLK*DIRHHLYPCSFGYF Trigger: AAAATAGCCAAAGGAACAAGGATACAGATGGTGTCTTATATCTCATTTGAGCAGTGGAGCCCAGAGATAATGGAACAACATATTAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS GCA 90 bp | TTTCTGACAATACTTTGTATAGATGTTGACATTTATCCTTTGAGTTaGAGTAATTGGGTAGTGTGGCTTTTACATTCCTGTAAGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: FLTILCIDVDIYPLS*SNWVVWLLHSCKVA Trigger: AGCCACCTTACAGGAATGTAAAAGCCACACTACCCAATTACTGCAACTCAAAGGATAAATGTCAACATCTATACAAAGTATTGTCAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS GCA 72 bp | GCTTCCAATCTGGGTGAGGAGTATGCCCCCACCAAATaGCTCCAAGAGAGCTCACACTTGGAGGTCTACGGG | + |
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Preference number: 6 (lower is better) Translates to: ASNLGEEYAPTK*LQESSHLEVYG Trigger: CCCGTAGACCTCCAAGTGTGAGCTCTCTTGGAGGCATTTGGTGGGGGCATACTCCTCACCCAGATTGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS GCA 72 bp | CCCAGTCTGGAGTTGAGTGACACAGTCAAGGCTCACTaGCACCTCAACTTCCCAGAACCAAGCAATCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PSLELSDTVKAH*HLNFPEPSNPP Trigger: AGGAGGATTGCTTGGTTCTGGGAAGTTGAGGTGGCAGTGAGCCTTGACTGTGTCACTCAACTCCAGACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CAA 72 bp | AGGTCTCACTGTGTTTCCCAGGCAGGTCCTGCACTCTaGGCCTCAAGTGATCATTCAACCTCAGCCTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: RSHCVSQAGPAL*ASSDHSTSASQ Trigger: TTGGGAGGCTGAGGTTGAATGATCACTTGAGGCCAAGAGTGCAGGACCTGCCTGGGAAACACAGTGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | GGGAAGGATTTGCTTCCCAATTCCTTTTGGCAGCAATaGGCTCCATGTGGCTTTAGGAGTTCTGGCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GKDLLPNSFWQQ*APCGFRSSGSL Trigger: CAAGCTGCCAGAACTCCTAAAGCCACATGGAGCTCATTGCTGCCAAAAGGAATTGGGAAGCAAATCCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS GCA 72 bp | AGATTCCAGAACTGTGTCTTAGGCACTCAGAGTTTCTaGAGGTCACACATCTGGATACGGCATAGCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RFQNCVLGTQSF*RSHIWIRHSLV Trigger: GACCAAGCTATGCCGTATCCAGATGTGTGACCTGCAGAAACTCTGAGTGCCTAAGACACAGTTCTGGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | TTGAATGTGTCCCCTAAAGTTCATGTATTGGAAACTTaGTCCCCAATGTGGAGGTGGTGGGAGATGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: LNVSPKVHVLET*SPMWRWWEMGP Trigger: AGGTCCCATCTCCCACCACCTCCACATTGGGGATCAAGTTTCCAATACATGAACTTTAGGGGACACATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | ATAAATGTCAGACACCAAACCACAAATCCAGGAAGCTaGGAGGGCACCAAGCAGGATAAATCTCTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: INVRHQTTNPGS*EGTKQDKSLSL Trigger: GAGAGAGAGAGATTTATCCTGCTTGGTGCCCTCTCAGCTTCCTGGATTTGTGGTTTGGTGTCTGACATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CAA 72 bp | ATGGGAGTGACGTGCCATTCCATTTGTCATATTCTGTaGTTTAGGAGCAAGTCATGGGTCTGGTCTACACCT | + |
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Preference number: 6 (lower is better) Translates to: MGVTCHSICHIL*FRSKSWVWSTP Trigger: AGGTGTAGACCAGACCCATGACTTGCTCCTAAACAACAGAATATGACAAATGGAATGGCACGTCACTCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | GAGCTCACACTTGGAGGTCTACGGGACAGAGTAATTTaGCACTGTAGCAAGAACTATCAACAGTACCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: ELTLGGLRDRVI*HCSKNYQQYLV Trigger: TACAAGGTACTGTTGATAGTTCTTGCTACAGTGTCAAATTACTCTGTCCCGTAGACCTCCAAGTGTGAGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | GTCTCTCTCATCCATATGATGTATTCCACCACATTATaGTGCATAAGAAGGCCGTCACCAGATGCTAGTACT | + |
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Preference number: 6 (lower is better) Translates to: VSLIHMMYSTTL*CIRRPSPDAST Trigger: AGTACTAGCATCTGGTGACGGCCTTCTTATGCATCATAATGTGGTGGAATACATCATATGGATGAGAGAGAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | TCTGTAATGAAGTTTCCATCTGTCATTACCGTACCCTaGGCTTTCAGCTTTAGATTTGTAGTGTTGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: SVMKFPSVITVP*AFSFRFVVLMS Trigger: GCTCATCAACACTACAAATCTAAAGCTGAAAGCTCAGGGTACGGTAATGACAGATGGAAACTTCATTACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CCA 72 bp | GACATTTATCCTTTGAGTTGCAGTAATTGGGTAGTGTaGCTTTTACATTCCTGTAAGGTGGCTTTGAGATAC | + |
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Preference number: 6 (lower is better) Translates to: DIYPLSCSNWVV*LLHSCKVALRY Trigger: GTATCTCAAAGCCACCTTACAGGAATGTAAAAGCCACACTACCCAATTACTGCAACTCAAAGGATAAATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CAA 72 bp | AGACCAGCCACATATTTACCACTTGGGTGTTCTTCATaGCTTTCTGTAATGAAGTTTCCATCTGTCATTACC | + |
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Preference number: 6 (lower is better) Translates to: RPATYLPLGCSS*LSVMKFPSVIT Trigger: GGTAATGACAGATGGAAACTTCATTACAGAAAGCAATGAAGAACACCCAAGTGGTAAATATGTGGCTGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | AGTGGTAATGGAGAAGTTCAGGTTTTAACGAAGACCTaGACTAAGGATAAGGAACTCTATTTATGTATGCCA | + |
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Preference number: 6 (lower is better) Translates to: SGNGEVQVLTKT*TKDKELYLCMP Trigger: TGGCATACATAAATAGAGTTCCTTATCCTTAGTTCAGGTCTTCGTTAAAACCTGAACTTCTCCATTACCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CAA 90 bp | CCAAGATTTTGTCTGGTAATTCAAATATCTCAGCGTTTGTTTGTCTaGACTATGGATTCCATGTTCTTGTTTGTTCACCTTTCTAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: PRFCLVIQISQRLFV*TMDSMFLFVHLSSE Trigger: TTCACTAGAAAGGTGAACAAACAAGAACATGGAATCCATAGTCAAGACAAACAAACGCTGAGATATTTGAATTACCAGACAAAATCTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS TCA 72 bp | GACAACATGGATGAATGTGGAGGACATTACACTATGTaGAATAAGGTAGTCACAGGACAACAAATACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: DNMDECGGHYTM*NKVVTGQQILF Trigger: AAAAAGTATTTGTTGTCCTGTGACTACCTTATTTCACATAGTGTAATGTCCTCCACATTCATCCATGTTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CAA 72 bp | TGTCTGGTAATTCAAATATCTCAGCGTTTGTTTGTCTaGACTATGGATTCCATGTTCTTGTTTGTTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: CLVIQISQRLFV*TMDSMFLFVHL Trigger: AAGGTGAACAAACAAGAACATGGAATCCATAGTCAAGACAAACAAACGCTGAGATATTTGAATTACCAGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS GCA 72 bp | ATACTTTGTATAGATGTTGACATTTATCCTTTGAGTTaGAGTAATTGGGTAGTGTGGCTTTTACATTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ILCIDVDIYPLS*SNWVVWLLHSC Trigger: ACAGGAATGTAAAAGCCACACTACCCAATTACTGCAACTCAAAGGATAAATGTCAACATCTATACAAAGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CAA 72 bp | CCAAGATTTTGTCTGGTAATTCAAATATCTCAGCGTTaGTTTGTCTTGACTATGGATTCCATGTTCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: PRFCLVIQISQR*FVLTMDSMFLF Trigger: AAACAAGAACATGGAATCCATAGTCAAGACAAACAAACGCTGAGATATTTGAATTACCAGACAAAATCTTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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| CDS CAA 72 bp | TCTTTGAAGATGACCATAATAGCTCCTTCCAAGATTTaGTCTGGTAATTCAAATATCTCAGCGTTTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLKMTIIAPSKI*SGNSNISAFVC Trigger: ACAAACAAACGCTGAGATATTTGAATTACCAGACAAAATCTTGGAAGGAGCTATTATGGTCATCTTCAAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649291.1 |
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