Pregenerated sensors for LINC02654 (Homo sapiens)
Ensembl gene IDs: ENSG00000226140Ensembl transcript IDs: ENST00000417542.1, ENST00000434386.6, ENST00000652949.1, ENST00000653570.1, ENST00000654129.1, ENST00000655111.1, ENST00000655950.1, ENST00000656314.1, ENST00000656914.1, ENST00000659592.1, ENST00000664373.1, ENST00000666333.1, ENST00000667599.1, ENST00000668798.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTCCAAAGCTTGTCGCCCTCCTTTCCAAGATGGCAGCCAAAGCATaGGAGGGGCCACAGGCTTTCTGGAGTTGGGAGGGGAGCGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PPKLVALLSKMAAKA*EGPQAFWSWEGSVW Trigger: CCACACGCTCCCCTCCCAACTCCAGAAAGCCTGTGGCCCCTCCCATGCTTTGGCTGCCATCTTGGAAAGGAGGGCGACAAGCTTTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS CCA 90 bp | GGGTTATTCTCCACCCTCCAAAGCTTGTCGCCCTCCTTTCCAAGATaGCAGCCAAAGCATGGGAGGGGCCACAGGCTTTCTGGAGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: GLFSTLQSLSPSFPR*QPKHGRGHRLSGVG Trigger: CCCAACTCCAGAAAGCCTGTGGCCCCTCCCATGCTTTGGCTGCCATCTTGGAAAGGAGGGCGACAAGCTTTGGAGGGTGGAGAATAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS CCA 90 bp | TTCCAAGGTTACATCTTCCTCTCTCCATCCCTGAAACTGAAGAGATaGACTTACGTGGGAAAGAGAGATACCAGCCTCCTGAAAAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: FQGYIFLSPSLKLKR*TYVGKRDTSLLKRE Trigger: TTCCCTTTTCAGGAGGCTGGTATCTCTCTTTCCCACGTAAGTCCATCTCTTCAGTTTCAGGGATGGAGAGAGGAAGATGTAACCTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656914.1 |
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| CDS TCA 90 bp | GCCTCAGCCAGTTCTGATCCTAGGGAGCCTATTGATAGCTGTTGTTaGCATCTATGGTGGATAAACTCATTCGTAGTCTATGCTTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: ASASSDPREPIDSCC*HLWWINSFVVYAFL Trigger: TAGAAAAGCATAGACTACGAATGAGTTTATCCACCATAGATGTCAACAACAGCTATCAATAGGCTCCCTAGGATCAGAACTGGCTGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS TCA 90 bp | TTCAACTGGGTTATTCTCCACCCTCCAAAGCTTCCTCTTTTGTCATaGGTGGGATTATCCTATAAATTGTGTCCTTCCGCTTCCAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: FNWVILHPPKLPLLS*VGLSYKLCPSASKV Trigger: AACCTTGGAAGCGGAAGGACACAATTTATAGGATAATCCCACTCATGACAAAAGAGGAAGCTTTGGAGGGTGGAGAATAACCCAGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656914.1 |
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| CDS GCA 90 bp | TTTCTTCTCCTGACCACTCTTTGCATTTTTCCAAGAGCCATCCTTTaGATGACACATAAGTTAGGCCGGGTTTTTAGGAGTCTGATTTGG | + |
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Preference number: 5 (lower is better) Translates to: FLLLTTLCIFPRAIL*MTHKLGRVFRSLIW Trigger: CCAAATCAGACTCCTAAAAACCCGGCCTAACTTATGTGTCATGCAAAGGATGGCTCTTGGAAAAATGCAAAGAGTGGTCAGGAGAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000653570.1 ENST00000656314.1 ENST00000667599.1 |
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| CDS CCA 90 bp | ACTGGGTTATTCTCCACCCTCCAAAGCTTCCTCTTTTGTCATGAGTaGGATTATCCTATAAATTGTGTCCTTCCGCTTCCAAGGTTACAT | + |
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Preference number: 5 (lower is better) Translates to: TGLFSTLQSFLFCHE*DYPINCVLPLPRLH Trigger: ATGTAACCTTGGAAGCGGAAGGACACAATTTATAGGATAATCCCACTCATGACAAAAGAGGAAGCTTTGGAGGGTGGAGAATAACCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656914.1 |
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| CDS GCA 72 bp | CTTTCTGGAGTTGGGAGGGGAGCGTGTGGTGACCGATaGGAACGGAGCTCAACTGAAGCTTGCCTCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LSGVGRGACGDR*ERSSTEACLSQ Trigger: CTGGCTGAGGCAAGCTTCAGTTGAGCTCCGTTCGCATCGGTCACCACACGCTCCCCTCCCAACTCCAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS CCA 72 bp | TCCACCCTCCAAAGCTTGTCGCCCTCCTTTCCAAGATaGCAGCCAAAGCATGGGAGGGGCCACAGGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: STLQSLSPSFPR*QPKHGRGHRLS Trigger: AGAAAGCCTGTGGCCCCTCCCATGCTTTGGCTGCCATCTTGGAAAGGAGGGCGACAAGCTTTGGAGGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS CAA 90 bp | ATTGCTTGTAGATTTTCAACTGGGTTATTCTCCACCCTCCAAAGCTaGTCGCCCTCCTTTCCAAGATGGCAGCCAAAGCATGGGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: IACRFSTGLFSTLQS*SPSFPRWQPKHGRG Trigger: GCCCCTCCCATGCTTTGGCTGCCATCTTGGAAAGGAGGGCGACAAGCTTTGGAGGGTGGAGAATAACCCAGTTGAAAATCTACAAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS CAA 90 bp | GGGGGCCTTAACTCGATTCTTTGGACAACTGCTCTGTGTTTCAGATaGCTCTACCTTGTCGCCCTCCTTTCCAAGATGGCAGCCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GGLNSILWTTALCFR*LYLVALLSKMAAKA Trigger: TGCTTTGGCTGCCATCTTGGAAAGGAGGGCGACAAGGTAGAGCAATCTGAAACACAGAGCAGTTGTCCAAAGAATCGAGTTAAGGCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656314.1 ENST00000664373.1 |
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| CDS CCA 72 bp | TACATCTTCCTCTCTCCATCCCTGAAACTGAAGAGATaGACTTACGTGGGAAAGAGAGATACCAGCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: YIFLSPSLKLKR*TYVGKRDTSLL Trigger: CAGGAGGCTGGTATCTCTCTTTCCCACGTAAGTCCATCTCTTCAGTTTCAGGGATGGAGAGAGGAAGATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656914.1 |
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| CDS CAA 72 bp | TTTGGACAACTGCTCTGTGTTTCAGATTGCTCTACCTaGTCGCCCTCCTTTCCAAGATGGCAGCCAAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: FGQLLCVSDCST*SPSFPRWQPKH Trigger: ATGCTTTGGCTGCCATCTTGGAAAGGAGGGCGACAAGGTAGAGCAATCTGAAACACAGAGCAGTTGTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656314.1 ENST00000664373.1 |
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| CDS CAA 72 bp | AACTCGATTCTTTGGACAACTGCTCTGTGTTTCAGATaGCTCTACCTTGTCGCCCTCCTTTCCAAGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: NSILWTTALCFR*LYLVALLSKMA Trigger: TGCCATCTTGGAAAGGAGGGCGACAAGGTAGAGCAATCTGAAACACAGAGCAGTTGTCCAAAGAATCGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656314.1 ENST00000664373.1 |
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| CDS GCA 72 bp | GTCCTCAGAAATGAGGTATCACAATCTGGGAGAATTTaGTGGATTCTGGATTTGTCTCTGCCACCTACCAGT | + |
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Preference number: 6 (lower is better) Translates to: VLRNEVSQSGRI*WILDLSLPPTS Trigger: ACTGGTAGGTGGCAGAGACAAATCCAGAATCCAGCAAATTCTCCCAGATTGTGATACCTCATTTCTGAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652949.1 |
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| CDS GCA 72 bp | TTGACATCTATGGTGGATAAACTCATTCGTAGTCTATaGTTTTCTAGTGTCTCTGGACCCTGGAGGATCCGC | + |
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Preference number: 6 (lower is better) Translates to: LTSMVDKLIRSL*FSSVSGPWRIR Trigger: GCGGATCCTCCAGGGTCCAGAGACACTAGAAAAGCATAGACTACGAATGAGTTTATCCACCATAGATGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS CAA 90 bp | CTCCTGACCACTCTTTGTTCAACTCAAGGATCAACACTGCAAATGTaGCCTCTTCTTTTCCTTGAATTTGAGTCTCTGGACCAAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLTTLCSTQGSTLQM*PLLFLEFESLDQES Trigger: GGACTCTTGGTCCAGAGACTCAAATTCAAGGAAAAGAAGAGGCAACATTTGCAGTGTTGATCCTTGAGTTGAACAAAGAGTGGTCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000417542.1 ENST00000434386.6 ENST00000654129.1 ENST00000655111.1 ENST00000655950.1 ENST00000656914.1 ENST00000659592.1 ENST00000664373.1 ENST00000666333.1 ENST00000668798.1 |
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| CDS CAA 90 bp | AGGGTACCTGAGTTCCTGAGTTCTGGAGGTAGGTTACATTTCTTGTaGGTTTCTTCTCCTGACCACTCTTTGTTCAACTCAAGGATCAAC | + |
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Preference number: 6 (lower is better) Translates to: RVPEFLSSGGRLHFL*VSSPDHSLFNSRIN Trigger: GTTGATCCTTGAGTTGAACAAAGAGTGGTCAGGAGAAGAAACCAACAAGAAATGTAACCTACCTCCAGAACTCAGGAACTCAGGTACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000434386.6 ENST00000654129.1 ENST00000655111.1 ENST00000655950.1 ENST00000656914.1 ENST00000659592.1 ENST00000664373.1 ENST00000666333.1 ENST00000668798.1 |
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| CDS CAA 90 bp | AGGGTACCTGAGTTCCTGAGTTCTGGAGGTAGGTTACATTTCTTGTaGGTTTCTTCTCCTGACCACTCTTTGCATTTTTCCAAGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RVPEFLSSGGRLHFL*VSSPDHSLHFSKSH Trigger: ATGGCTCTTGGAAAAATGCAAAGAGTGGTCAGGAGAAGAAACCAACAAGAAATGTAACCTACCTCCAGAACTCAGGAACTCAGGTACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653570.1 ENST00000656314.1 ENST00000667599.1 |
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| CDS CCA 72 bp | TTCTCCACCCTCCAAAGCTTCCTCTTTTGTCATGAGTaGGATTATCCTATAAATTGTGTCCTTCCGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FSTLQSFLFCHE*DYPINCVLPLP Trigger: TGGAAGCGGAAGGACACAATTTATAGGATAATCCCACTCATGACAAAAGAGGAAGCTTTGGAGGGTGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656914.1 |
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| CDS TCA 72 bp | GTTATTCTCCACCCTCCAAAGCTTCCTCTTTTGTCATaGGTGGGATTATCCTATAAATTGTGTCCTTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: VILHPPKLPLLS*VGLSYKLCPSA Trigger: AGCGGAAGGACACAATTTATAGGATAATCCCACTCATGACAAAAGAGGAAGCTTTGGAGGGTGGAGAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656914.1 |
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| CDS CCA 72 bp | CTCAGAAATGAGGTATCACAATCTGGGAGAATTTGCTaGATTCTGGATTTGTCTCTGCCACCTACCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LRNEVSQSGRIC*ILDLSLPPTSF Trigger: AAAACTGGTAGGTGGCAGAGACAAATCCAGAATCCAGCAAATTCTCCCAGATTGTGATACCTCATTTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652949.1 |
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| CDS CAA 72 bp | GAGTTCCTGAGTTCTGGAGGTAGGTTACATTTCTTGTaGGTTTCTTCTCCTGACCACTCTTTGCATTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: EFLSSGGRLHFL*VSSPDHSLHFS Trigger: GGAAAAATGCAAAGAGTGGTCAGGAGAAGAAACCAACAAGAAATGTAACCTACCTCCAGAACTCAGGAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653570.1 ENST00000656314.1 ENST00000667599.1 |
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| CDS CAA 90 bp | GAATTTGCTGAGTTCCTGAGTTCTGGAGGTAGGTTACATTTCTTGTaGGTTTCTTCTCCTGACCACTCTTTGTTCAACTCAAGGATCAAC | + |
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Preference number: 6 (lower is better) Translates to: EFAEFLSSGGRLHFL*VSSPDHSLFNSRIN Trigger: GTTGATCCTTGAGTTGAACAAAGAGTGGTCAGGAGAAGAAACCAACAAGAAATGTAACCTACCTCCAGAACTCAGGAACTCAGCAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417542.1 |
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| CDS TCA 72 bp | AGTTCTGATCCTAGGGAGCCTATTGATAGCTGTTGTTaGCATCTATGGTGGATAAACTCATTCGTAGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: SSDPREPIDSCC*HLWWINSFVVY Trigger: ATAGACTACGAATGAGTTTATCCACCATAGATGTCAACAACAGCTATCAATAGGCTCCCTAGGATCAGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655111.1 ENST00000659592.1 |
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| CDS CAA 72 bp | ACTCTTTGTTCAACTCAAGGATCAACACTGCAAATGTaGCCTCTTCTTTTCCTTGAATTTGAGTCTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: TLCSTQGSTLQM*PLLFLEFESLD Trigger: GTCCAGAGACTCAAATTCAAGGAAAAGAAGAGGCAACATTTGCAGTGTTGATCCTTGAGTTGAACAAAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000417542.1 ENST00000434386.6 ENST00000654129.1 ENST00000655111.1 ENST00000655950.1 ENST00000656914.1 ENST00000659592.1 ENST00000664373.1 ENST00000666333.1 ENST00000668798.1 |
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| CDS CAA 72 bp | TCTGAATCACAGCAAGACAAGATAATTTTATCTGTTTaGGGGGCCTTAACTCGATTCTTTGGACAACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SESQQDKIILSV*GALTRFFGQLL Trigger: GAGCAGTTGTCCAAAGAATCGAGTTAAGGCCCCCAAAACAGATAAAATTATCTTGTCTTGCTGTGATTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000652949.1 ENST00000654129.1 ENST00000656314.1 ENST00000664373.1 ENST00000668798.1 |
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| CDS CAA 90 bp | TGGATACATGAATTTTCAGTATTCGTTTGCTTTGGATTGAAAGATTaGGTAAAGATGAAGTCCTCAGAAATGAGGTATCACAATCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: WIHEFSVFVCFGLKD*VKMKSSEMRYHNLG Trigger: TCCCAGATTGTGATACCTCATTTCTGAGGACTTCATCTTTACCAAATCTTTCAATCCAAAGCAAACGAATACTGAAAATTCATGTATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417542.1 ENST00000652949.1 |
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