Pregenerated sensors for LINC02652 (Homo sapiens)
Ensembl gene IDs: ENSG00000237128Ensembl transcript IDs: ENST00000421132.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGCCCTTGATGTCCTGAAACAGTGGAGTGATCCAAGGCAAGTTTaGGGTTTAGTCCTCAATCATCCACCTGGGCCTTGTTCTCAATTC | + |
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Preference number: 5 (lower is better) Translates to: GALDVLKQWSDPRQV*GLVLNHPPGPCSQF Trigger: GAATTGAGAACAAGGCCCAGGTGGATGATTGAGGACTAAACCCCAAACTTGCCTTGGATCACTCCACTGTTTCAGGACATCAAGGGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421132.1 |
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| CDS TCA 90 bp | CTTATTTTAATGACAGGGTATCACACGCTTGCAGCAACCAGAACGTaGCTTCTCCTGAGTACTGAAGTATTTCACAGCATAGAGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LILMTGYHTLAATRT*LLLSTEVFHSIEGS Trigger: GGACCCCTCTATGCTGTGAAATACTTCAGTACTCAGGAGAAGTCACGTTCTGGTTGCTGCAAGCGTGTGATACCCTGTCATTAAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421132.1 |
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| CDS TCA 72 bp | GCTTGCAGCAACCAGAACGTGACTTCTCCTGAGTACTaGAGTATTTCACAGCATAGAGGGGTCCATATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ACSNQNVTSPEY*SISQHRGVHMA Trigger: CGCCATATGGACCCCTCTATGCTGTGAAATACTTCAGTACTCAGGAGAAGTCACGTTCTGGTTGCTGCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421132.1 |
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| CDS CCA 72 bp | GATGTCCTGAAACAGTGGAGTGATCCAAGGCAAGTTTaGGGTTTAGTCCTCAATCATCCACCTGGGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DVLKQWSDPRQV*GLVLNHPPGPC Trigger: ACAAGGCCCAGGTGGATGATTGAGGACTAAACCCCAAACTTGCCTTGGATCACTCCACTGTTTCAGGACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421132.1 |
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| CDS CCA 72 bp | AAGGCAAGTTTGGGGTTTAGTCCTCAATCATCCACCTaGGCCTTGTTCTCAATTCCACTAACTAAACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KASLGFSPQSST*ALFSIPLTKQR Trigger: CCTCTGTTTAGTTAGTGGAATTGAGAACAAGGCCCAGGTGGATGATTGAGGACTAAACCCCAAACTTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421132.1 |
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