Pregenerated sensors for LINC02648 (Homo sapiens)

Ensembl gene IDs: ENSG00000225948

Ensembl transcript IDs: ENST00000448835.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTAGCTCAATGGGATTTAGTCATCTGCAGCGATGAGTCAAGACCTTaGCGAAACAGGAGAGATGAGGTATCCAAATCCTTTTGTAAATCG	+
Preference number: 5 (lower is better) Translates to: LAQWDLVICSDESRP*RNRRDEVSKSFCKS Trigger: CGATTTACAAAAGGATTTGGATACCTCATCTCTCCTGTTTCGCCAAGGTCTTGACTCATCGCTGCAGATGACTAAATCCCATTGAGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448835.2
CDS CCA 72 bp	TGGGATTTAGTCATCTGCAGCGATGAGTCAAGACCTTaGCGAAACAGGAGAGATGAGGTATCCAAATCCTTT	+
Preference number: 6 (lower is better) Translates to: WDLVICSDESRP*RNRRDEVSKSF Trigger: AAAGGATTTGGATACCTCATCTCTCCTGTTTCGCCAAGGTCTTGACTCATCGCTGCAGATGACTAAATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448835.2
CDS GCA 72 bp	TCTTCCTCTCAGTCACTGCATGCTATGTATTCTTACTaGAGTCTTAGTAGCATTTCAAAGGAGGGACTTGGA	+
Preference number: 6 (lower is better) Translates to: SSSQSLHAMYSY*SLSSISKEGLG Trigger: TCCAAGTCCCTCCTTTGAAATGCTACTAAGACTGCAGTAAGAATACATAGCATGCAGTGACTGAGAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448835.2
CDS CAA 72 bp	TTCAAGATATTCCTTTTGAAATTAAGCTCTTCCCTTTaGCTTCAGGAAAAACTCACTCAAACCAGGCTTCTC	+
Preference number: 6 (lower is better) Translates to: FKIFLLKLSSSL*LQEKLTQTRLL Trigger: GAGAAGCCTGGTTTGAGTGAGTTTTTCCTGAAGCAAAAGGGAAGAGCTTAATTTCAAAAGGAATATCTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448835.2
CDS CAA 72 bp	CTTACTGCAGTCTTAGTAGCATTTCAAAGGAGGGACTaGGACGTTTGTAAGATTTTGAAGTCTGAATTAAGA	+
Preference number: 6 (lower is better) Translates to: LTAVLVAFQRRD*DVCKILKSELR Trigger: TCTTAATTCAGACTTCAAAATCTTACAAACGTCCAAGTCCCTCCTTTGAAATGCTACTAAGACTGCAGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448835.2

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