Pregenerated sensors for LINC02621 (Homo sapiens)

Ensembl gene IDs: ENSG00000234756

Ensembl transcript IDs: ENST00000442753.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ACACAACCTCACCCTAAGTACTTATTTATCTCTCCAAATCAGAGCTaGATTCTTTGTGACTATGGCCTGAAGCTTGACTTCTTGAAGCTC	+
Preference number: 5 (lower is better) Translates to: TQPHPKYLFISPNQS*ILCDYGLKLDFLKL Trigger: GAGCTTCAAGAAGTCAAGCTTCAGGCCATAGTCACAAAGAATTCAGCTCTGATTTGGAGAGATAAATAAGTACTTAGGGTGAGGTTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442753.1
CDS TCA 72 bp	TATTATGTGGAGGAACCAGAACTCAGCTCTTCTGACTaGATCCTGTCTTCTTTTCACTCCTCGACCCTATTC	+
Preference number: 6 (lower is better) Translates to: YYVEEPELSSSD*ILSSFHSSTLF Trigger: GAATAGGGTCGAGGAGTGAAAAGAAGACAGGATTCAGTCAGAAGAGCTGAGTTCTGGTTCCTCCACATAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442753.1
CDS CAA 90 bp	ATCCTGTCTTCTTTTCACTCCTCGACCCTATTCCTCATTAAGATGTaGAATATGACATTTCCTTCCACAATTGACTTCTATTTTGTAGAG	+
Preference number: 6 (lower is better) Translates to: ILSSFHSSTLFLIKM*NMTFPSTIDFYFVE Trigger: CTCTACAAAATAGAAGTCAATTGTGGAAGGAAATGTCATATTCAACATCTTAATGAGGAATAGGGTCGAGGAGTGAAAAGAAGACAGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442753.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu