Pregenerated sensors for LINC02615 (Homo sapiens)
Ensembl gene IDs: ENSG00000251432Ensembl transcript IDs: ENST00000504984.1, ENST00000505133.5, ENST00000509834.6, ENST00000511497.5, ENST00000662621.1, ENST00000663973.1, ENST00000667326.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCAACGTCAGAACAAAGCCAGCTTCCCCCTCCTCCTTCCCACCGTaGGCACAGACCCCATGTCCTGGATTGATGGCTGGGATGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: PNVRTKPASPSSFPP*AQTPCPGLMAGMMG Trigger: GCCCATCATCCCAGCCATCAATCCAGGACATGGGGTCTGTGCCCACGGTGGGAAGGAGGAGGGGGAAGCTGGCTTTGTTCTGACGTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000511497.5 ENST00000663973.1 ENST00000667326.1 |
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| CDS CCA 90 bp | ATCACTCTTCCCTATTCAGTTGGCCGAAGCAGTCACAGGTCAGCCTaGTACTTTGGATCACTGGAGGCTGAAGACCCTCCTATAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ITLPYSVGRSSHRSA*YFGSLEAEDPPIGS Trigger: GCTGCCTATAGGAGGGTCTTCAGCCTCCAGTGATCCAAAGTACCAGGCTGACCTGTGACTGCTTCGGCCAACTGAATAGGGAAGAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS GCA 90 bp | CACTCTGCCACAGTGACCAGTGAGGATCCAGAAGTCCCCTCATCCTaGCGACAGTGCCACAAAGCTTATGAACAAGGGTTTCCATCTATC | + |
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Preference number: 5 (lower is better) Translates to: HSATVTSEDPEVPSS*RQCHKAYEQGFPSI Trigger: GATAGATGGAAACCCTTGTTCATAAGCTTTGTGGCACTGTCGGCAGGATGAGGGGACTTCTGGATCCTCACTGGTCACTGTGGCAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000511497.5 ENST00000662621.1 ENST00000663973.1 ENST00000667326.1 |
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| CDS CCA 90 bp | AGAACAGGCCTGGAAACAGCACAGCATCACTCTTCCCTATTCAGTTaGCCGAAGCAGTCACAGGTCAGCCTGGTACTTTGGATCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: RTGLETAQHHSSLFS*PKQSQVSLVLWITG Trigger: TCCAGTGATCCAAAGTACCAGGCTGACCTGTGACTGCTTCGGCCAACTGAATAGGGAAGAGTGATGCTGTGCTGTTTCCAGGCCTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS GCA 90 bp | GAAGAGCTGACAAACCACTTTGCACCTTTTTGGCAGCATCTGCTTTaGACGGCTGTCTTGGTGAAACACAGGACCTGGGCTCCTATCTTC | + |
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Preference number: 5 (lower is better) Translates to: EELTNHFAPFWQHLL*TAVLVKHRTWAPIF Trigger: GAAGATAGGAGCCCAGGTCCTGTGTTTCACCAAGACAGCCGTGCAAAGCAGATGCTGCCAAAAAGGTGCAAAGTGGTTTGTCAGCTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504984.1 ENST00000511497.5 |
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| CDS CCA 90 bp | CCACTGTGGCTCTGCAGAAGGAAAGTGACAGCATATCTAGAAAGCTaGTGTACTTCAGATGAACAGGAACTCAAAGGGAGCTGTCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PLWLCRRKVTAYLES*CTSDEQELKGSCQG Trigger: CCCCTGACAGCTCCCTTTGAGTTCCTGTTCATCTGAAGTACACCAGCTTTCTAGATATGCTGTCACTTTCCTTCTGCAGAGCCACAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000504984.1 ENST00000511497.5 ENST00000662621.1 |
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| CDS CCA 90 bp | AGGGCAGGAAATGGATCTGCTATTTTGACAGGATGGCTAGATGGCTaGACTAACCAGGGCCCCTCTACCTCTGCATATAAGGTCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: RAGNGSAILTGWLDG*TNQGPSTSAYKVKS Trigger: AGACTTGACCTTATATGCAGAGGTAGAGGGGCCCTGGTTAGTCCAGCCATCTAGCCATCCTGTCAAAATAGCAGATCCATTTCCTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CCA 90 bp | ATTGGCCATCATACTCCTGCTATTTTGACAGGATGGCTAGATGGCTaGACTAACCAGGGCCCCTCTACCTCTGCATATAAGGTCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: IGHHTPAILTGWLDG*TNQGPSTSAYKVKS Trigger: AGACTTGACCTTATATGCAGAGGTAGAGGGGCCCTGGTTAGTCCAGCCATCTAGCCATCCTGTCAAAATAGCAGGAGTATGATGGCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CCA 90 bp | TTTTTAGTGTCCCCAACTCTGAGTCCATGGTTGTACTGGGAAGGCTaGGAACCCTATATACTAATCTACTCCTCTCTCACCTACTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: FLVSPTLSPWLYWEG*EPYILIYSSLTYSD Trigger: GTCAGAGTAGGTGAGAGAGGAGTAGATTAGTATATAGGGTTCCCAGCCTTCCCAGTACAACCATGGACTCAGAGTTGGGGACACTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS TCA 90 bp | CCACCATCTTCTTGGCTTCTAGGAGATTTGTCTCCTGATTTTTCTTaGTTTCTCGGGTTGCCCTTCCTCATTCTCCTCACAGACTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PPSSWLLGDLSPDFS*FLGLPFLILLTDSL Trigger: CAAAGAGTCTGTGAGGAGAATGAGGAAGGGCAACCCGAGAAATCAAGAAAAATCAGGAGACAAATCTCCTAGAAGCCAAGAAGATGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509834.6 |
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| CDS CCA 90 bp | GATGATTACTCCTTAACCCTGTGGGCTTATCCACTGAGATTAGGCTaGGATACAGTTACTTCCTTGGGTGAGAAGTCAGCAGTCAATTGT | + |
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Preference number: 5 (lower is better) Translates to: DDYSLTLWAYPLRLG*DTVTSLGEKSAVNC Trigger: ACAATTGACTGCTGACTTCTCACCCAAGGAAGTAACTGTATCCCAGCCTAATCTCAGTGGATAAGCCCACAGGGTTAAGGAGTAATCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS CCA 90 bp | CCTCAGTTTCTTCACCCTCTCTCAGCCTATTTCAGTAGCCGTAAATaGAGACTACATCTTTCACACTTGTTGCACAATGTTGTGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: PQFLHPLSAYFSSRK*RLHLSHLLHNVVRT Trigger: GGTCCTCACAACATTGTGCAACAAGTGTGAAAGATGTAGTCTCCATTTACGGCTACTGAAATAGGCTGAGAGAGGGTGAAGAAACTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505133.5 |
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| CDS CCA 90 bp | TCATGTACATTTTTAGTGTCCCCAACTCTGAGTCCATGGTTGTACTaGGAAGGCTGGGAACCCTATATACTAATCTACTCCTCTCTCACC | + |
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Preference number: 5 (lower is better) Translates to: SCTFLVSPTLSPWLY*EGWEPYILIYSSLT Trigger: GGTGAGAGAGGAGTAGATTAGTATATAGGGTTCCCAGCCTTCCCAGTACAACCATGGACTCAGAGTTGGGGACACTAAAAATGTACATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CCA 90 bp | GCCATCATACTCCTAGATAGCAGAGGACAAGGGAGCCTGGAAATGTaGTTGGCTGTAATACAGAGTAGAATAAAAGAAGGGCAGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: AIILLDSRGQGSLEM*LAVIQSRIKEGQEM Trigger: CATTTCCTGCCCTTCTTTTATTCTACTCTGTATTACAGCCAACCACATTTCCAGGCTCCCTTGTCCTCTGCTATCTAGGAGTATGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CCA 90 bp | GAAAGTCTAGGAAACCCTCTCTCAGCCTATTTCAGTAGCCGTAAATaGAGACTACATCTTTCACACTTGTTGCACAATGTTGTGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: ESLGNPLSAYFSSRK*RLHLSHLLHNVVRT Trigger: GGTCCTCACAACATTGTGCAACAAGTGTGAAAGATGTAGTCTCCATTTACGGCTACTGAAATAGGCTGAGAGAGGGTTTCCTAGACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509834.6 |
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| CDS TCA 90 bp | GCCGTAAATGGAGACTACATCTTTCACACTTGTTGCACAATGTTGTaGGGACCTTCTCCACAAACTGTCTCCAAAAAGCTTAAGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: AVNGDYIFHTCCTML*GPSPQTVSKKLKDS Trigger: TGAGTCCTTAAGCTTTTTGGAGACAGTTTGTGGAGAAGGTCCTCACAACATTGTGCAACAAGTGTGAAAGATGTAGTCTCCATTTACGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS TCA 90 bp | TCTGACTTCACAAGGACTTCACTCGTACTTCACAAAGATTTCCAGTaGACCCAATCATCGCTCTTGCTGTCAGATGTCAGATTAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: SDFTRTSLVLHKDFQ*TQSSLLLSDVRLMW Trigger: CCACATTAATCTGACATCTGACAGCAAGAGCGATGATTGGGTTCACTGGAAATCTTTGTGAAGTACGAGTGAAGTCCTTGTGAAGTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000511497.5 ENST00000662621.1 ENST00000663973.1 ENST00000667326.1 |
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| CDS TCA 90 bp | CTTCTTCTTCCACTGAAGTTGTTCTTTTTCTTGAACATCTCTCACTaGAGAAGGAAGAATCCAAGTTCAGTGAATGGCAGAGATATCGCT | + |
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Preference number: 5 (lower is better) Translates to: LLLPLKLFFFLNISH*RRKNPSSVNGRDIA Trigger: AGCGATATCTCTGCCATTCACTGAACTTGGATTCTTCCTTCTTCAGTGAGAGATGTTCAAGAAAAAGAACAACTTCAGTGGAAGAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS TCA 72 bp | AGCAGACAACACCAACCACTCTGCCACAGTGACCAGTaGGGATCCAGAAGTCCCCTCATCCTGCCGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: SRQHQPLCHSDQ*GSRSPLILPTV Trigger: CACTGTCGGCAGGATGAGGGGACTTCTGGATCCTCACTGGTCACTGTGGCAGAGTGGTTGGTGTTGTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000511497.5 ENST00000662621.1 ENST00000663973.1 ENST00000667326.1 |
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| CDS GCA 72 bp | CCCCCAACAGCTGCCAATAACCCCCAACAGCAAGGCTaGCTCAGTGTATTCCAGCTCTTGCCCTCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: PPTAANNPQQQG*LSVFQLLPSHF Trigger: GAAGTGTGAGGGCAAGAGCTGGAATACACTGAGGCAGCCTTGCTGTTGGGGGTTATTGGCAGCTGTTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000504984.1 |
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| CDS CCA 72 bp | TCCATTGGCCATCATACTCCTGCTATTTTGACAGGATaGCTAGATGGCTGGACTAACCAGGGCCCCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: SIGHHTPAILTG*LDGWTNQGPST Trigger: GGTAGAGGGGCCCTGGTTAGTCCAGCCATCTAGCCATCCTGTCAAAATAGCAGGAGTATGATGGCCAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CCA 72 bp | AGAAGGGCAGGAAATGGATCTGCTATTTTGACAGGATaGCTAGATGGCTGGACTAACCAGGGCCCCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: RRAGNGSAILTG*LDGWTNQGPST Trigger: GGTAGAGGGGCCCTGGTTAGTCCAGCCATCTAGCCATCCTGTCAAAATAGCAGATCCATTTCCTGCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CAA 72 bp | GACAAACCACTTTGCACCTTTTTGGCAGCATCTGCTTaGCACGGCTGTCTTGGTGAAACACAGGACCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: DKPLCTFLAASA*HGCLGETQDLG Trigger: GCCCAGGTCCTGTGTTTCACCAAGACAGCCGTGCAAAGCAGATGCTGCCAAAAAGGTGCAAAGTGGTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504984.1 ENST00000511497.5 |
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| CDS CAA 72 bp | CCTGGAAACAGCACAGCATCACTCTTCCCTATTCAGTaGGCCGAAGCAGTCACAGGTCAGCCTGGTACTTTG | + |
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Preference number: 6 (lower is better) Translates to: PGNSTASLFPIQ*AEAVTGQPGTL Trigger: CAAAGTACCAGGCTGACCTGTGACTGCTTCGGCCAACTGAATAGGGAAGAGTGATGCTGTGCTGTTTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CAA 90 bp | AAGAACAGGCCTGGAAACAGCACAGCATCACTCTTCCCTATTCAGTaGGCCGAAGCAGTCACAGGTCAGCCTGGTACTTTGGATCACTGG | + |
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Preference number: 6 (lower is better) Translates to: KNRPGNSTASLFPIQ*AEAVTGQPGTLDHW Trigger: CCAGTGATCCAAAGTACCAGGCTGACCTGTGACTGCTTCGGCCAACTGAATAGGGAAGAGTGATGCTGTGCTGTTTCCAGGCCTGTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS GCA 72 bp | ACAGTGACCAGTGAGGATCCAGAAGTCCCCTCATCCTaGCGACAGTGCCACAAAGCTTATGAACAAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: TVTSEDPEVPSS*RQCHKAYEQGF Trigger: AAACCCTTGTTCATAAGCTTTGTGGCACTGTCGGCAGGATGAGGGGACTTCTGGATCCTCACTGGTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000511497.5 ENST00000662621.1 ENST00000663973.1 ENST00000667326.1 |
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| CDS CAA 90 bp | AACCACTTTGCACCTTTTTGGCAGCATCTGCTTTGCACGGCTGTCTaGGTGAAACACAGGACCTGGGCTCCTATCTTCTTCTTCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: NHFAPFWQHLLCTAV*VKHRTWAPIFFFFH Trigger: GTGGAAGAAGAAGAAGATAGGAGCCCAGGTCCTGTGTTTCACCAAGACAGCCGTGCAAAGCAGATGCTGCCAAAAAGGTGCAAAGTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504984.1 ENST00000511497.5 |
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| CDS CAA 90 bp | AGAAGAGCTGACAAACCACTTTGCACCTTTTTGGCAGCATCTGCTTaGCACGGCTGTCTTGGTGAAACACAGGACCTGGGCTCCTATCTT | + |
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Preference number: 6 (lower is better) Translates to: RRADKPLCTFLAASA*HGCLGETQDLGSYL Trigger: AAGATAGGAGCCCAGGTCCTGTGTTTCACCAAGACAGCCGTGCAAAGCAGATGCTGCCAAAAAGGTGCAAAGTGGTTTGTCAGCTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504984.1 ENST00000511497.5 |
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| CDS TCA 72 bp | CTTTTTGGCAGCATCTGCTTTGCACGGCTGTCTTGGTaGAACACAGGACCTGGGCTCCTATCTTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LFGSICFARLSW*NTGPGLLSSSS Trigger: AGAAGAAGAAGATAGGAGCCCAGGTCCTGTGTTTCACCAAGACAGCCGTGCAAAGCAGATGCTGCCAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504984.1 ENST00000511497.5 |
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| CDS CCA 72 bp | GGTGTCAGGAAAGGCGTTCACAGGGAGATGTCACATTaGAGCATTCCACAAAGTCACCCAAGAAGAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: GVRKGVHREMSH*SIPQSHPRRGE Trigger: TTCACCTCTTCTTGGGTGACTTTGTGGAATGCTCCAATGTGACATCTCCCTGTGAACGCCTTTCCTGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CCA 72 bp | CATACTCCTGCTATTTTGACAGGATGGCTAGATGGCTaGACTAACCAGGGCCCCTCTACCTCTGCATATAAG | + |
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Preference number: 6 (lower is better) Translates to: HTPAILTGWLDG*TNQGPSTSAYK Trigger: CTTATATGCAGAGGTAGAGGGGCCCTGGTTAGTCCAGCCATCTAGCCATCCTGTCAAAATAGCAGGAGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CCA 72 bp | TCCCCAACTCTGAGTCCATGGTTGTACTGGGAAGGCTaGGAACCCTATATACTAATCTACTCCTCTCTCACC | + |
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Preference number: 6 (lower is better) Translates to: SPTLSPWLYWEG*EPYILIYSSLT Trigger: GGTGAGAGAGGAGTAGATTAGTATATAGGGTTCCCAGCCTTCCCAGTACAACCATGGACTCAGAGTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CCA 72 bp | CCTGATACCCCACAAACTGTCCTAGAGGTTATGCCTTaGAGTAGATGTCTCCTGACTTCCCCACCACGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PDTPQTVLEVMP*SRCLLTSPPRL Trigger: TAAACGTGGTGGGGAAGTCAGGAGACATCTACTCCAAGGCATAACCTCTAGGACAGTTTGTGGGGTATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CCA 72 bp | CTGGAAACAGCACAGCATCACTCTTCCCTATTCAGTTaGCCGAAGCAGTCACAGGTCAGCCTTTCTAACATC | + |
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Preference number: 6 (lower is better) Translates to: LETAQHHSSLFS*PKQSQVSLSNI Trigger: GATGTTAGAAAGGCTGACCTGTGACTGCTTCGGCCAACTGAATAGGGAAGAGTGATGCTGTGCTGTTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CAA 72 bp | CACCTTCGGCATGCAGGTGGCTGCAATACTCTGGGGTaGCATAAAGTCTTAAGGATCAGTCTGATCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: HLRHAGGCNTLG*HKVLRISLIPF Trigger: GAAAGGGATCAGACTGATCCTTAAGACTTTATGCAACCCCAGAGTATTGCAGCCACCTGCATGCCGAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CAA 90 bp | CTGTGGGCTTATCCACTGAGATTAGGCTGGGATACAGTTACTTCCTaGGGTGAGAAGTCAGCAGTCAATTGTAGTAGTCGTGCTCCCATC | + |
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Preference number: 6 (lower is better) Translates to: LWAYPLRLGWDTVTS*GEKSAVNCSSRAPI Trigger: GATGGGAGCACGACTACTACAATTGACTGCTGACTTCTCACCCAAGGAAGTAACTGTATCCCAGCCTAATCTCAGTGGATAAGCCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS CAA 90 bp | TATAGGATAGGTTTTGGATCCATTGGCCATCATACTCCTGCTATTTaGACAGGATGGCTAGATGGCTGGACTAACCAGGGCCCCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: YRIGFGSIGHHTPAI*TGWLDGWTNQGPST Trigger: GGTAGAGGGGCCCTGGTTAGTCCAGCCATCTAGCCATCCTGTCAAAATAGCAGGAGTATGATGGCCAATGGATCCAAAACCTATCCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS TCA 72 bp | CTGGAAACCTGCTCTCTGGAACTTGCTGGAAATTCCTaGCACTTTTTAGGGTGTCAGGAAAGGCGTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: LETCSLELAGNS*HFLGCQERRSQ Trigger: CTGTGAACGCCTTTCCTGACACCCTAAAAAGTGTCAGGAATTTCCAGCAAGTTCCAGAGAGCAGGTTTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS TCA 72 bp | TGGCCGAAGCAGTCACAGGTCAGCCTTTCTAACATCTaGAAAGTTCTGAAATCCCAAATCTGTCTGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WPKQSQVSLSNI*KVLKSQICLVA Trigger: GGCCACCAGACAGATTTGGGATTTCAGAACTTTTCAGATGTTAGAAAGGCTGACCTGTGACTGCTTCGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CCA 72 bp | TCCTTAACCCTGTGGGCTTATCCACTGAGATTAGGCTaGGATACAGTTACTTCCTTGGGTGAGAAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLTLWAYPLRLG*DTVTSLGEKSA Trigger: TGCTGACTTCTCACCCAAGGAAGTAACTGTATCCCAGCCTAATCTCAGTGGATAAGCCCACAGGGTTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS CCA 72 bp | AATGGATCTGCTATTTTGACAGGATGGCTAGATGGCTaGACTAACCAGGGCCCCTCTACCTCTGCATATAAG | + |
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Preference number: 6 (lower is better) Translates to: NGSAILTGWLDG*TNQGPSTSAYK Trigger: CTTATATGCAGAGGTAGAGGGGCCCTGGTTAGTCCAGCCATCTAGCCATCCTGTCAAAATAGCAGATCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CAA 90 bp | TCCCATCTTCATGAGACCACTTCTCCAATACTGATTTCACCTCTTTaGCAGGATGTCCTGGGGCCACTAGTAAACTGTAGAGTCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SHLHETTSPILISPL*QDVLGPLVNCRVCP Trigger: GGGACAGACTCTACAGTTTACTAGTGGCCCCAGGACATCCTGCAAAAGAGGTGAAATCAGTATTGGAGAAGTGGTCTCATGAAGATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS TCA 72 bp | TCAGTGAATGGCAGAGATATCGCTGTGGTGTCATACTaGCCAAACTTGCTGGAAACCTGCTCTCTGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: SVNGRDIAVVSY*PNLLETCSLEL Trigger: AAGTTCCAGAGAGCAGGTTTCCAGCAAGTTTGGTCAGTATGACACCACAGCGATATCTCTGCCATTCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS TCA 72 bp | CACACTGAGAGGTCAAACTGCATAGGAGTAGAGGCATaGAGAGGAAACTCTGACTTCACAAGGACTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: HTERSNCIGVEA*RGNSDFTRTSL Trigger: GAGTGAAGTCCTTGTGAAGTCAGAGTTTCCTCTTCATGCCTCTACTCCTATGCAGTTTGACCTCTCAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000511497.5 ENST00000662621.1 ENST00000663973.1 ENST00000667326.1 |
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| CDS GCA 72 bp | GCAGAGATATCGCTGTGGTGTCATACTGACCAAACTTaGTGGAAACCTGCTCTCTGGAACTTGCTGGAAATT | + |
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Preference number: 6 (lower is better) Translates to: AEISLWCHTDQT*WKPALWNLLEI Trigger: AATTTCCAGCAAGTTCCAGAGAGCAGGTTTCCAGCAAGTTTGGTCAGTATGACACCACAGCGATATCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CCA 72 bp | GAGATATCGCTGTGGTGTCATACTGACCAAACTTGCTaGAAACCTGCTCTCTGGAACTTGCTGGAAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: EISLWCHTDQTC*KPALWNLLEIP Trigger: AGGAATTTCCAGCAAGTTCCAGAGAGCAGGTTTCCAGCAAGTTTGGTCAGTATGACACCACAGCGATATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS GCA 72 bp | TTTGTTAGAACATGCAGAAGAGCTGACAAACCACTTTaGACCTTTTTGGCAGCATCTGCTTTGCACGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FVRTCRRADKPL*TFLAASALHGC Trigger: ACAGCCGTGCAAAGCAGATGCTGCCAAAAAGGTGCAAAGTGGTTTGTCAGCTCTTCTGCATGTTCTAACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504984.1 ENST00000511497.5 |
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| CDS CCA 72 bp | ACCAAACTTGCTGGAAACCTGCTCTCTGGAACTTGCTaGAAATTCCTGACACTTTTTAGGGTGTCAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: TKLAGNLLSGTC*KFLTLFRVSGK Trigger: CTTTCCTGACACCCTAAAAAGTGTCAGGAATTTCCAGCAAGTTCCAGAGAGCAGGTTTCCAGCAAGTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CCA 72 bp | CTCCTAGATAGCAGAGGACAAGGGAGCCTGGAAATGTaGTTGGCTGTAATACAGAGTAGAATAAAAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LLDSRGQGSLEM*LAVIQSRIKEG Trigger: CCCTTCTTTTATTCTACTCTGTATTACAGCCAACCACATTTCCAGGCTCCCTTGTCCTCTGCTATCTAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CAA 72 bp | CATGAGACCACTTCTCCAATACTGATTTCACCTCTTTaGCAGGATGTCCTGGGGCCACTAGTAAACTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HETTSPILISPL*QDVLGPLVNCR Trigger: TCTACAGTTTACTAGTGGCCCCAGGACATCCTGCAAAAGAGGTGAAATCAGTATTGGAGAAGTGGTCTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS CAA 72 bp | CTAGATAGCAGAGGACAAGGGAGCCTGGAAATGTGGTaGGCTGTAATACAGAGTAGAATAAAAGAAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LDSRGQGSLEMW*AVIQSRIKEGQ Trigger: CTGCCCTTCTTTTATTCTACTCTGTATTACAGCCAACCACATTTCCAGGCTCCCTTGTCCTCTGCTATCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS TCA 72 bp | GTAAGCACTGGGCCCAAGTGGACAGGAAATTGGAATTaGGAACCTTGCATAGAAGCTAGGTTCTACATGAAA | + |
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Preference number: 6 (lower is better) Translates to: VSTGPKWTGNWN*EPCIEARFYMK Trigger: TTTCATGTAGAACCTAGCTTCTATGCAAGGTTCTCAATTCCAATTTCCTGTCCACTTGGGCCCAGTGCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667326.1 |
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| CDS CCA 72 bp | CTCTCACTGAAGAAGGAAGAATCCAAGTTCAGTGAATaGCAGAGATATCGCTGTGGTGTCATACTGACCAAA | + |
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Preference number: 6 (lower is better) Translates to: LSLKKEESKFSE*QRYRCGVILTK Trigger: TTTGGTCAGTATGACACCACAGCGATATCTCTGCCATTCACTGAACTTGGATTCTTCCTTCTTCAGTGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511497.5 |
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| CDS CCA 72 bp | AGGCAGAAGCTTCCAAGTACTTTTAAAGAACAGGCCTaGAAACAGCACAGCATCACTCTTCCCTATTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RQKLPSTFKEQA*KQHSITLPYSV Trigger: AACTGAATAGGGAAGAGTGATGCTGTGCTGTTTCCAGGCCTGTTCTTTAAAAGTACTTGGAAGCTTCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511497.5 ENST00000662621.1 |
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| CDS CCA 72 bp | TCATGTACATTTTTAGTGTCCCCAACTCTGAGTCCATaGTTGTACTGGGAAGGCTGGGAACCCTATATACTA | + |
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Preference number: 6 (lower is better) Translates to: SCTFLVSPTLSP*LYWEGWEPYIL Trigger: TAGTATATAGGGTTCCCAGCCTTCCCAGTACAACCATGGACTCAGAGTTGGGGACACTAAAAATGTACATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CCA 72 bp | ATTGCTTTCATGATATCGCCTACTATAACATTCTGGTaGTGTGCACAGTTTCTCCCTCTCCTCTTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: IAFMISPTITFW*CAQFLPLLFPP Trigger: AGGAGGAAAGAGGAGAGGGAGAAACTGTGCACACCACCAGAATGTTATAGTAGGCGATATCATGAAAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CAA 90 bp | TCAGCCTATTTCAGTAGCCGTAAATGGAGACTACATCTTTCACACTaGTTGCACAATGTTGTGAGGACCTTCTCCACAAACTGTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SAYFSSRKWRLHLSH*LHNVVRTFSTNCLQ Trigger: TTGGAGACAGTTTGTGGAGAAGGTCCTCACAACATTGTGCAACAAGTGTGAAAGATGTAGTCTCCATTTACGGCTACTGAAATAGGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS TCA 72 bp | CAGCAGTCAATTGTAGTAGTCGTGCTCCCATCTTCATaGGACCACTTCTCCAATACTGATTTCACCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QQSIVVVVLPSS*DHFSNTDFTSF Trigger: AAAAGAGGTGAAATCAGTATTGGAGAAGTGGTCTCATGAAGATGGGAGCACGACTACTACAATTGACTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS TCA 72 bp | GGAGACTACATCTTTCACACTTGTTGCACAATGTTGTaGGGACCTTCTCCACAAACTGTCTCCAAAAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GDYIFHTCCTML*GPSPQTVSKKL Trigger: AAGCTTTTTGGAGACAGTTTGTGGAGAAGGTCCTCACAACATTGTGCAACAAGTGTGAAAGATGTAGTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS TCA 72 bp | AAACTGCATAGGAGTAGAGGCATGAAGAGGAAACTCTaGCTTCACAAGGACTTCACTCGTACTTCACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: KLHRSRGMKRKL*LHKDFTRTSQR Trigger: TCTTTGTGAAGTACGAGTGAAGTCCTTGTGAAGTCAGAGTTTCCTCTTCATGCCTCTACTCCTATGCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000511497.5 ENST00000662621.1 ENST00000663973.1 ENST00000667326.1 |
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| CDS CCA 72 bp | AACATTGCTTTCATGATATCGCCTACTATAACATTCTaGTGGTGTGCACAGTTTCTCCCTCTCCTCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NIAFMISPTITF*WCAQFLPLLFP Trigger: AGGAAAGAGGAGAGGGAGAAACTGTGCACACCACCAGAATGTTATAGTAGGCGATATCATGAAAGCAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS CAA 72 bp | AGTAGCCGTAAATGGAGACTACATCTTTCACACTTGTaGCACAATGTTGTGAGGACCTTCTCCACAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: SSRKWRLHLSHL*HNVVRTFSTNC Trigger: ACAGTTTGTGGAGAAGGTCCTCACAACATTGTGCAACAAGTGTGAAAGATGTAGTCTCCATTTACGGCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS CAA 72 bp | TTCAGTAGCCGTAAATGGAGACTACATCTTTCACACTaGTTGCACAATGTTGTGAGGACCTTCTCCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: FSSRKWRLHLSH*LHNVVRTFSTN Trigger: GTTTGTGGAGAAGGTCCTCACAACATTGTGCAACAAGTGTGAAAGATGTAGTCTCCATTTACGGCTACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505133.5 ENST00000509834.6 |
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| CDS CCA 72 bp | CAATCATCGCTCTTGCTGTCAGATGTCAGATTAATGTaGCCACCAACATGTAGATATAGGATAGGTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QSSLLLSDVRLM*PPTCRYRIGFG Trigger: TCCAAAACCTATCCTATATCTACATGTTGGTGGCCACATTAATCTGACATCTGACAGCAAGAGCGATGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000511497.5 ENST00000662621.1 ENST00000663973.1 ENST00000667326.1 |
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| CDS CAA 72 bp | GAAAGTCTAGGAAACCTTTTGGGATGCATGTCTAATTaGTTAGAACATGCAGAAGAGCTGACAAACCACTTT | + |
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Preference number: 6 (lower is better) Translates to: ESLGNLLGCMSN*LEHAEELTNHF Trigger: AAAGTGGTTTGTCAGCTCTTCTGCATGTTCTAACAAATTAGACATGCATCCCAAAAGGTTTCCTAGACTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504984.1 ENST00000511497.5 |
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| CDS CAA 72 bp | TGCTGTTTAAGGATCAAGAGAGAATCTTCTAGAACTTaGTCTTGGTTCCAGAACAACACAGATTGTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CCLRIKRESSRT*SWFQNNTDCLS Trigger: AGAGAGACAATCTGTGTTGTTCTGGAACCAAGACAAAGTTCTAGAAGATTCTCTCTTGATCCTTAAACAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663973.1 ENST00000667326.1 |
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| CDS TCA 72 bp | GTGGTCAAAATATTAATACATTTGCTTATGAGGTGCTaGCCCAGACTCTACTGGAAATACTACATATGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VVKILIHLLMRC*PRLYWKYYICN Trigger: ATTGCATATGTAGTATTTCCAGTAGAGTCTGGGTCAGCACCTCATAAGCAAATGTATTAATATTTTGACCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504984.1 |
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| CDS CCA 72 bp | TTAAGGATCAAGAGAGAATCTTCTAGAACTTTGTCTTaGTTCCAGAACAACACAGATTGTCTCTCTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LRIKRESSRTLS*FQNNTDCLSFS Trigger: AGAAAAAGAGAGACAATCTGTGTTGTTCTGGAACCAAGACAAAGTTCTAGAAGATTCTCTCTTGATCCTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663973.1 ENST00000667326.1 |
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| CDS CAA 72 bp | AATGAGCAAATATTATTATTAGCTAACAGAAAGTGCTaGGCATATAGTGAGTGCTTCGCAAACATAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NEQILLLANRKC*AYSECFANISC Trigger: GCAGCTTATGTTTGCGAAGCACTCACTATATGCCAAGCACTTTCTGTTAGCTAATAATAATATTTGCTCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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| CDS GCA 72 bp | TTATTAGCTAACAGAAAGTGCTTGGCATATAGTGAGTaGTTCGCAAACATAAGCTGCTATCATTTTTATATG | + |
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Preference number: 6 (lower is better) Translates to: LLANRKCLAYSE*FANISCYHFYM Trigger: CATATAAAAATGATAGCAGCTTATGTTTGCGAAGCACTCACTATATGCCAAGCACTTTCTGTTAGCTAATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662621.1 |
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