Pregenerated sensors for LINC02608 (Homo sapiens)
Ensembl gene IDs: ENSG00000226251Ensembl transcript IDs: ENST00000412221.5, ENST00000431307.1, ENST00000443448.6, ENST00000658599.1, ENST00000663668.1, ENST00000664988.1, ENST00000667543.1, ENST00000669457.1, ENST00000669915.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | AGGAGACCACCAAGAGGGCCTGTGTCCTTTGCAGGTTTCTGGGGGTaGAGAGTTATTCAGAAGTCTGCTGTTACCCTGACCCCATCCTCA | + |
Preference number: 5 (lower is better) Translates to: RRPPRGPVSFAGFWG*RVIQKSAVTLTPSS Trigger: TGAGGATGGGGTCAGGGTAACAGCAGACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACAGGCCCTCTTGGTGGTCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS TCA 90 bp | CACAAGATGAGGTCCCATAATAGGCTGGCTGCAAGAGGTTCACAGTaGTATCCGGGGTGGAAGGGAGGACTCTTCCAGGAGAAAGCAAGG | + |
Preference number: 5 (lower is better) Translates to: HKMRSHNRLAARGSQ*YPGWKGGLFQEKAR Trigger: CCTTGCTTTCTCCTGGAAGAGTCCTCCCTTCCACCCCGGATATCACTGTGAACCTCTTGCAGCCAGCCTATTATGGGACCTCATCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667543.1 |
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CDS GCA 90 bp | AAGCAAGGCATCCAGGAGGAGACCACCAAGAGGGCCTGTGTCCTTTaGAGGTTTCTGGGGGTGCAGAGTTATTCAGAAGTCTGCTGTTAC | + |
Preference number: 5 (lower is better) Translates to: KQGIQEETTKRACVL*RFLGVQSYSEVCCY Trigger: GTAACAGCAGACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACAGGCCCTCTTGGTGGTCTCCTCCTGGATGCCTTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS CCA 90 bp | TCCGAGGCTCTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCAGTTCTGGAGGCTGAGAAGTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: SEALKSGDIPRYLLR*LILGNQFWRLRSPG Trigger: CCCTGGACTTCTCAGCCTCCAGAACTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAGAGCCTCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663668.1 |
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CDS GCA 90 bp | TGTGTCCTTTGCAGGTTTCTGGGGGTGCAGAGTTATTCAGAAGTCTaGTGTTACCCTGACCCCATCCTCAGCAGAACTTCCTCCATCATT | + |
Preference number: 5 (lower is better) Translates to: CVLCRFLGVQSYSEV*CYPDPILSRTSSII Trigger: AATGATGGAGGAAGTTCTGCTGAGGATGGGGTCAGGGTAACAGCAGACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS CCA 90 bp | TCCGAGGCTCTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCCTTGTAGAAGCTCTTACTCAGCAAGC | + |
Preference number: 5 (lower is better) Translates to: SEALKSGDIPRYLLR*LILGNPCRSSYSAS Trigger: GCTTGCTGAGTAAGAGCTTCTACAAGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAGAGCCTCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664988.1 |
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CDS CCA 90 bp | TCCGAGGCTCTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCACGATCACAAGATGAGGTCCCATAAT | + |
Preference number: 5 (lower is better) Translates to: SEALKSGDIPRYLLR*LILGNHDHKMRSHN Trigger: ATTATGGGACCTCATCTTGTGATCGTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAGAGCCTCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667543.1 |
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CDS TCA 90 bp | ATGGTTGTTTGCACGCCCAAGTTGACAGACTGCCCTTCATGGCAATaGTTCCTGTTACTATTACTTCACCCAGACATTGAATGTCAGGGT | + |
Preference number: 5 (lower is better) Translates to: MVVCTPKLTDCPSWQ*FLLLLLHPDIECQG Trigger: ACCCTGACATTCAATGTCTGGGTGAAGTAATAGTAACAGGAATCATTGCCATGAAGGGCAGTCTGTCAACTTGGGCGTGCAAACAACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669457.1 |
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CDS TCA 90 bp | TCAGAGCAAGAAAGGCTCTTAGGATGGTTGTTTGCACGCCCAAGTTaGCAGACTGCCCTTCATGGCAATGATTCCTGTTACTATTACTTC | + |
Preference number: 5 (lower is better) Translates to: SEQERLLGWLFARPS*QTALHGNDSCYYYF Trigger: GAAGTAATAGTAACAGGAATCATTGCCATGAAGGGCAGTCTGTCAACTTGGGCGTGCAAACAACCATCCTAAGAGCCTTTCTTGCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669457.1 |
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CDS CAA 72 bp | CTCTTATGGGGACCCTCTGCAGAGTCCCAAGGCAGCTaGGGACATCACATGGTGAGGGGGCTCATGAGAGAG | + |
Preference number: 6 (lower is better) Translates to: LLWGPSAESQGS*GHHMVRGLMRE Trigger: CTCTCTCATGAGCCCCCTCACCATGTGATGTCCCAAGCTGCCTTGGGACTCTGCAGAGGGTCCCCATAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667543.1 |
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CDS GCA 72 bp | CCAAGAGGGCCTGTGTCCTTTGCAGGTTTCTGGGGGTaGAGAGTTATTCAGAAGTCTGCTGTTACCCTGACC | + |
Preference number: 6 (lower is better) Translates to: PRGPVSFAGFWG*RVIQKSAVTLT Trigger: GGTCAGGGTAACAGCAGACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACAGGCCCTCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS GCA 72 bp | ATCCAGGAGGAGACCACCAAGAGGGCCTGTGTCCTTTaGAGGTTTCTGGGGGTGCAGAGTTATTCAGAAGTC | + |
Preference number: 6 (lower is better) Translates to: IQEETTKRACVL*RFLGVQSYSEV Trigger: GACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACAGGCCCTCTTGGTGGTCTCCTCCTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS CAA 72 bp | CATCCAGGAGGAGACCACCAAGAGGGCCTGTGTCCTTaGCAGGTTTCTGGGGGTGCAGAGTTATTCAGAAGT | + |
Preference number: 6 (lower is better) Translates to: HPGGDHQEGLCP*QVSGGAELFRS Trigger: ACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACAGGCCCTCTTGGTGGTCTCCTCCTGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS GCA 72 bp | TGCAGGTTTCTGGGGGTGCAGAGTTATTCAGAAGTCTaGTGTTACCCTGACCCCATCCTCAGCAGAACTTCC | + |
Preference number: 6 (lower is better) Translates to: CRFLGVQSYSEV*CYPDPILSRTS Trigger: GGAAGTTCTGCTGAGGATGGGGTCAGGGTAACAGCAGACTTCTGAATAACTCTGCACCCCCAGAAACCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS CCA 72 bp | CTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCCCTGCGAAGGCACAGTG | + |
Preference number: 6 (lower is better) Translates to: LKSGDIPRYLLR*LILGNPCEGTV Trigger: CACTGTGCCTTCGCAGGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431307.1 |
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CDS CCA 72 bp | AGACCACCAAGAGGGCCTGTGTCCTTTGCAGGTTTCTaGGGGTGCAGAGTTATTCAGAAGTCTGCTGTTACC | + |
Preference number: 6 (lower is better) Translates to: RPPRGPVSFAGF*GCRVIQKSAVT Trigger: GGTAACAGCAGACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACAGGCCCTCTTGGTGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS CAA 72 bp | AAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCCCTGCGAAGGCACAGTGGAG | + |
Preference number: 6 (lower is better) Translates to: KSGDIPRYLLRW*ILGNPCEGTVE Trigger: CTCCACTGTGCCTTCGCAGGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431307.1 |
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CDS CAA 90 bp | AAAGCAAGGCATCCAGGAGGAGACCACCAAGAGGGCCTGTGTCCTTaGCAGGTTTCTGGGGGTGCAGAGTTATTCAGAAGTCTGCTGTTA | + |
Preference number: 6 (lower is better) Translates to: KARHPGGDHQEGLCP*QVSGGAELFRSLLL Trigger: TAACAGCAGACTTCTGAATAACTCTGCACCCCCAGAAACCTGCAAAGGACACAGGCCCTCTTGGTGGTCTCCTCCTGGATGCCTTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS CAA 90 bp | GAGGCTCTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCAGTTCTGGAGGCTGAGAAGTCCAGGGACA | + |
Preference number: 6 (lower is better) Translates to: EALKSGDIPRYLLRW*ILGNQFWRLRSPGT Trigger: TGTCCCTGGACTTCTCAGCCTCCAGAACTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAGAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663668.1 |
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CDS TCA 72 bp | GGGGGTGCAGAGTTATTCAGAAGTCTGCTGTTACCCTaGCCCCATCCTCAGCAGAACTTCCTCCATCATTTC | + |
Preference number: 6 (lower is better) Translates to: GGAELFRSLLLP*PHPQQNFLHHF Trigger: GAAATGATGGAGGAAGTTCTGCTGAGGATGGGGTCAGGGTAACAGCAGACTTCTGAATAACTCTGCACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000443448.6 ENST00000667543.1 ENST00000669915.1 |
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CDS TCA 72 bp | AATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTTaGTCCTGGGGAATCAGGTTCACAGTGATATCCGGG | + |
Preference number: 6 (lower is better) Translates to: NLGTFQGICSDG*SWGIRFTVISG Trigger: CCCGGATATCACTGTGAACCTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443448.6 ENST00000669915.1 |
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CDS GCA 72 bp | TTTTTGTCTTCTGAGACCTACTTCAGAGTGTGTTGCTaGTGGTCCGAGGTGATGGCCTCTTCTCCTCTGGTA | + |
Preference number: 6 (lower is better) Translates to: FLSSETYFRVCC*WSEVMASSPLV Trigger: TACCAGAGGAGAAGAGGCCATCACCTCGGACCAGCAGCAACACACTCTGAAGTAGGTCTCAGAAGACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000412221.5 ENST00000669457.1 |
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CDS GCA 72 bp | CCTATCAGAGCAAGAAAGGCTCTTAGGATGGTTGTTTaGACGCCCAAGTTGACAGACTGCCCTTCATGGCAA | + |
Preference number: 6 (lower is better) Translates to: PIRARKALRMVV*TPKLTDCPSWQ Trigger: TTGCCATGAAGGGCAGTCTGTCAACTTGGGCGTGCAAACAACCATCCTAAGAGCCTTTCTTGCTCTGATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669457.1 |
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CDS CCA 72 bp | GGGCCCAGGATTCACAAGTGTTCCAAAATTAGCAACTaGCCGTGGTGTACACCCACAGAGCAGTTAGACATT | + |
Preference number: 6 (lower is better) Translates to: GPRIHKCSKISN*PWCTPTEQLDI Trigger: AATGTCTAACTGCTCTGTGGGTGTACACCACGGCCAGTTGCTAATTTTGGAACACTTGTGAATCCTGGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658599.1 ENST00000667543.1 ENST00000669915.1 |
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CDS CCA 72 bp | TATCTGCTCAGATGGTTGATCCTGGGGAATCAGTTCTaGAGGCTGAGAAGTCCAGGGACAAAGGATTCCATC | + |
Preference number: 6 (lower is better) Translates to: YLLRWLILGNQF*RLRSPGTKDSI Trigger: GATGGAATCCTTTGTCCCTGGACTTCTCAGCCTCCAGAACTGATTCCCCAGGATCAACCATCTGAGCAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663668.1 |
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CDS CCA 72 bp | CTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCAGTTCTGGAGGCTGAGA | + |
Preference number: 6 (lower is better) Translates to: LKSGDIPRYLLR*LILGNQFWRLR Trigger: TCTCAGCCTCCAGAACTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663668.1 |
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CDS CAA 90 bp | CAACTGGCCGTGGTGTACACCCACAGAGCAGTTAGACATTTCCCATaGAAAACACTCAATGGGAAAGAGTTCTGGAGGCTGAGAAGTCCA | + |
Preference number: 6 (lower is better) Translates to: QLAVVYTHRAVRHFP*KTLNGKEFWRLRSP Trigger: TGGACTTCTCAGCCTCCAGAACTCTTTCCCATTGAGTGTTTTCAATGGGAAATGTCTAACTGCTCTGTGGGTGTACACCACGGCCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658599.1 ENST00000667543.1 ENST00000669915.1 |
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CDS CAA 90 bp | GAGGCTCTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCCTTGTAGAAGCTCTTACTCAGCAAGCACA | + |
Preference number: 6 (lower is better) Translates to: EALKSGDIPRYLLRW*ILGNPCRSSYSAST Trigger: TGTGCTTGCTGAGTAAGAGCTTCTACAAGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAGAGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664988.1 |
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CDS CAA 90 bp | GAGGCTCTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCACGATCACAAGATGAGGTCCCATAATAGG | + |
Preference number: 6 (lower is better) Translates to: EALKSGDIPRYLLRW*ILGNHDHKMRSHNR Trigger: CCTATTATGGGACCTCATCTTGTGATCGTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAGAGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667543.1 |
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CDS TCA 72 bp | GAAAGGCTCTTAGGATGGTTGTTTGCACGCCCAAGTTaGCAGACTGCCCTTCATGGCAATGATTCCTGTTAC | + |
Preference number: 6 (lower is better) Translates to: ERLLGWLFARPS*QTALHGNDSCY Trigger: GTAACAGGAATCATTGCCATGAAGGGCAGTCTGTCAACTTGGGCGTGCAAACAACCATCCTAAGAGCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669457.1 |
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CDS GCA 72 bp | TTTTTGTCTTCTGAGACCTACTTCAGAGTGTGTTGCTaGTGGTCCGAGGCTCTGAAATCTGGGGACATTCCA | + |
Preference number: 6 (lower is better) Translates to: FLSSETYFRVCC*WSEALKSGDIP Trigger: TGGAATGTCCCCAGATTTCAGAGCCTCGGACCAGCAGCAACACACTCTGAAGTAGGTCTCAGAAGACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000431307.1 ENST00000443448.6 ENST00000658599.1 ENST00000663668.1 ENST00000664988.1 ENST00000667543.1 ENST00000669915.1 |
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CDS CCA 72 bp | CTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCACGATCACAAGATGAGG | + |
Preference number: 6 (lower is better) Translates to: LKSGDIPRYLLR*LILGNHDHKMR Trigger: CCTCATCTTGTGATCGTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667543.1 |
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CDS CAA 72 bp | AAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCAGGTTCACAGTGATATCCGG | + |
Preference number: 6 (lower is better) Translates to: KSGDIPRYLLRW*ILGNQVHSDIR Trigger: CCGGATATCACTGTGAACCTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443448.6 ENST00000669915.1 |
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CDS CAA 72 bp | AAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCAGTTCTGGAGGCTGAGAAGT | + |
Preference number: 6 (lower is better) Translates to: KSGDIPRYLLRW*ILGNQFWRLRS Trigger: ACTTCTCAGCCTCCAGAACTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663668.1 |
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CDS CAA 72 bp | AAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCACGATCACAAGATGAGGTCC | + |
Preference number: 6 (lower is better) Translates to: KSGDIPRYLLRW*ILGNHDHKMRS Trigger: GGACCTCATCTTGTGATCGTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667543.1 |
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CDS TCA 72 bp | AATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTTaGTCCTGGGGAATCCTTGTAGAAGCTCTTACTCAG | + |
Preference number: 6 (lower is better) Translates to: NLGTFQGICSDG*SWGILVEALTQ Trigger: CTGAGTAAGAGCTTCTACAAGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664988.1 |
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CDS CCA 72 bp | CTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCAGGTTCACAGTGATATC | + |
Preference number: 6 (lower is better) Translates to: LKSGDIPRYLLR*LILGNQVHSDI Trigger: GATATCACTGTGAACCTGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443448.6 ENST00000669915.1 |
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CDS CCA 72 bp | CTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCCAGTATTGGTCATGACT | + |
Preference number: 6 (lower is better) Translates to: LKSGDIPRYLLR*LILGNPVLVMT Trigger: AGTCATGACCAATACTGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658599.1 |
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CDS CCA 72 bp | CTGAAATCTGGGGACATTCCAAGGTATCTGCTCAGATaGTTGATCCTGGGGAATCCTTGTAGAAGCTCTTAC | + |
Preference number: 6 (lower is better) Translates to: LKSGDIPRYLLR*LILGNPCRSSY Trigger: GTAAGAGCTTCTACAAGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664988.1 |
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CDS CAA 72 bp | GTGGTGTACACCCACAGAGCAGTTAGACATTTCCCATaGAAAACACTCAATGGGAAAGAGTTCTGGAGGCTG | + |
Preference number: 6 (lower is better) Translates to: VVYTHRAVRHFP*KTLNGKEFWRL Trigger: CAGCCTCCAGAACTCTTTCCCATTGAGTGTTTTCAATGGGAAATGTCTAACTGCTCTGTGGGTGTACACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658599.1 ENST00000667543.1 ENST00000669915.1 |
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CDS CAA 72 bp | AAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCCAGTATTGGTCATGACTCTG | + |
Preference number: 6 (lower is better) Translates to: KSGDIPRYLLRW*ILGNPVLVMTL Trigger: CAGAGTCATGACCAATACTGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658599.1 |
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CDS CCA 72 bp | CATTTCCCATTGAAAACACTCAATGGGAAAGAGTTCTaGAGGCTGAGAAGTCCAGGGACAAAGGATTCCATC | + |
Preference number: 6 (lower is better) Translates to: HFPLKTLNGKEF*RLRSPGTKDSI Trigger: GATGGAATCCTTTGTCCCTGGACTTCTCAGCCTCCAGAACTCTTTCCCATTGAGTGTTTTCAATGGGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658599.1 ENST00000667543.1 ENST00000669915.1 |
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CDS CCA 72 bp | AGGATTCACAAGTGTTCCAAAATTAGCAACTGGCCGTaGTGTACACCCACAGAGCAGTTAGACATTTCCCAT | + |
Preference number: 6 (lower is better) Translates to: RIHKCSKISNWP*CTPTEQLDISH Trigger: ATGGGAAATGTCTAACTGCTCTGTGGGTGTACACCACGGCCAGTTGCTAATTTTGGAACACTTGTGAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658599.1 ENST00000667543.1 ENST00000669915.1 |
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CDS CAA 72 bp | AAATCTGGGGACATTCCAAGGTATCTGCTCAGATGGTaGATCCTGGGGAATCCTTGTAGAAGCTCTTACTCA | + |
Preference number: 6 (lower is better) Translates to: KSGDIPRYLLRW*ILGNPCRSSYS Trigger: TGAGTAAGAGCTTCTACAAGGATTCCCCAGGATCAACCATCTGAGCAGATACCTTGGAATGTCCCCAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664988.1 |
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CDS CAA 90 bp | GTTTCCTTTTCCTCTCAGTGGATTCTGTGTAGCAGGAAGCATGAGTaGATTTCAGCTTTTTGTCTTCTGAGACCTACTTCAGAGTGTGTT | + |
Preference number: 6 (lower is better) Translates to: VSFSSQWILCSRKHE*ISAFCLLRPTSECV Trigger: AACACACTCTGAAGTAGGTCTCAGAAGACAAAAAGCTGAAATCAACTCATGCTTCCTGCTACACAGAATCCACTGAGAGGAAAAGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000412221.5 ENST00000431307.1 ENST00000443448.6 ENST00000658599.1 ENST00000663668.1 ENST00000664988.1 ENST00000667543.1 ENST00000669457.1 ENST00000669915.1 |