Pregenerated sensors for LINC02588 (Homo sapiens)
Ensembl gene IDs: ENSG00000257842Ensembl transcript IDs: ENST00000547786.1, ENST00000548328.5, ENST00000552101.1, ENST00000552826.5, ENST00000653681.1, ENST00000656804.1, ENST00000662478.1, ENST00000663208.1, ENST00000667328.1, ENST00000671020.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | CCCTTGGTTTCTGCGACAAGCCGCTTACGTTTGCCTGAGCCGTGTTaGCGGGGACCAGCGACCTTTCACCCCTCCCTTCCCACAGGAGCG | + |
Preference number: 5 (lower is better) Translates to: PLVSATSRLRLPEPC*RGPATFHPSLPTGA Trigger: CGCTCCTGTGGGAAGGGAGGGGTGAAAGGTCGCTGGTCCCCGGCAACACGGCTCAGGCAAACGTAAGCGGCTTGTCGCAGAAACCAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653681.1 |
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CDS TCA 90 bp | GCAAGAAGTCCTGGAAGCATACAGTGCTGGCTCTCCCTCCAGCTCTaGCGCTGTCCCACCCGTTGTCAACGGTCACTCGAATGCCCTTCT | + |
Preference number: 5 (lower is better) Translates to: ARSPGSIQCWLSLQL*RCPTRCQRSLECPS Trigger: AGAAGGGCATTCGAGTGACCGTTGACAACGGGTGGGACAGCGTCAGAGCTGGAGGGAGAGCCAGCACTGTATGCTTCCAGGACTTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 |
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CDS GCA 90 bp | CTCGTATTTCGTTCAATATTTAGTTCTGTGTGCACACTCAGCTGTTaGCTGTCTTTAGTCTGCCTACCAGCGCCTTGTGAAGGGAAGACC | + |
Preference number: 5 (lower is better) Translates to: LVFRSIFSSVCTLSC*LSLVCLPAPCEGKT Trigger: GGTCTTCCCTTCACAAGGCGCTGGTAGGCAGACTAAAGACAGGCAACAGCTGAGTGTGCACACAGAACTAAATATTGAACGAAATACGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 90 bp | AGTAGGAGGAGAACTGTGGCAGGACAGAGTCTGGCTAGCCATCAATaGACATTGTTTATGTCTTCAAGATGGGTTATTTCAGAACTTAGC | + |
Preference number: 5 (lower is better) Translates to: SRRRTVAGQSLASHQ*TLFMSSRWVISELS Trigger: GCTAAGTTCTGAAATAACCCATCTTGAAGACATAAACAATGTGCATTGATGGCTAGCCAGACTCTGTCCTGCCACAGTTCTCCTCCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS GCA 90 bp | AATTTTATTCCGACACTCGTATTTCGTTCAATATTTAGTTCTGTGTaGACACTCAGCTGTTGCCTGTCTTTAGTCTGCCTACCAGCGCCT | + |
Preference number: 5 (lower is better) Translates to: NFIPTLVFRSIFSSV*TLSCCLSLVCLPAP Trigger: AGGCGCTGGTAGGCAGACTAAAGACAGGCAACAGCTGAGTGTGCACACAGAACTAAATATTGAACGAAATACGAGTGTCGGAATAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 90 bp | CCTTTCAGAGTCTATTCCAGCTACATTAGATGTTTTATCCGGTGTTaGAGGGTTGACGTTCAGGTCCGTGATATGTCCAAGATCTGTATA | + |
Preference number: 5 (lower is better) Translates to: PFRVYSSYIRCFIRC*RVDVQVRDMSKICI Trigger: TATACAGATCTTGGACATATCACGGACCTGAACGTCAACCCTGCAACACCGGATAAAACATCTAATGTAGCTGGAATAGACTCTGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS TCA 90 bp | ATACCTTTGTACAGCTTAGAATACATTGCCACAGTCTCTCTCGTTTaGCTCCCAATAATGGTGGAAATTGGTTGGAGTCTCAGTCTCTGT | + |
Preference number: 5 (lower is better) Translates to: IPLYSLEYIATVSLV*LPIMVEIGWSLSLC Trigger: ACAGAGACTGAGACTCCAACCAATTTCCACCATTATTGGGAGTCAAACGAGAGAGACTGTGGCAATGTATTCTAAGCTGTACAAAGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CCA 90 bp | CCAATAATGGTGGAAATTGGTTGGAGTCTCAGTCTCTGTTTTGAGTaGGAGGGAATCCGGAGCTCTAATGTATTACAATACTTAAGACAG | + |
Preference number: 5 (lower is better) Translates to: PIMVEIGWSLSLCFE*EGIRSSNVLQYLRQ Trigger: CTGTCTTAAGTATTGTAATACATTAGAGCTCCGGATTCCCTCCCACTCAAAACAGAGACTGAGACTCCAACCAATTTCCACCATTATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 90 bp | CTTGGAATAAGTTTTTCAGTAAGGGTAACATCCTTCTTCAGAATATaGATATGTAAGAACTCCTTTCCATCGCCTTTGCAGATACACACC | + |
Preference number: 5 (lower is better) Translates to: LGISFSVRVTSFFRI*ICKNSFPSPLQIHT Trigger: GGTGTGTATCTGCAAAGGCGATGGAAAGGAGTTCTTACATATGCATATTCTGAAGAAGGATGTTACCCTTACTGAAAAACTTATTCCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000548328.5 ENST00000552101.1 ENST00000552826.5 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CCA 90 bp | AGTTTGAAAGCTACATCTATAGCCTACTATAGGAGAATAAGGAAATaGTCCAAAGCAGTGAAAGAACTGCTAGAAAGTGGCTCCCATTTA | + |
Preference number: 5 (lower is better) Translates to: SLKATSIAYYRRIRK*SKAVKELLESGSHL Trigger: TAAATGGGAGCCACTTTCTAGCAGTTCTTTCACTGCTTTGGACCATTTCCTTATTCTCCTATAGTAGGCTATAGATGTAGCTTTCAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667328.1 |
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CDS GCA 90 bp | AAATCTAGTGAATATGTTTATACCTTTGTACAGCTTAGAATACATTaGCACAGTCTCTCTCGTTTGACTCCCAATAATGGTGGAAATTGG | + |
Preference number: 5 (lower is better) Translates to: KSSEYVYTFVQLRIH*HSLSRLTPNNGGNW Trigger: CCAATTTCCACCATTATTGGGAGTCAAACGAGAGAGACTGTGGCAATGTATTCTAAGCTGTACAAAGGTATAAACATATTCACTAGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 72 bp | TCTGCGACAAGCCGCTTACGTTTGCCTGAGCCGTGTTaGCGGGGACCAGCGACCTTTCACCCCTCCCTTCCC | + |
Preference number: 6 (lower is better) Translates to: SATSRLRLPEPC*RGPATFHPSLP Trigger: GGGAAGGGAGGGGTGAAAGGTCGCTGGTCCCCGGCAACACGGCTCAGGCAAACGTAAGCGGCTTGTCGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653681.1 |
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CDS TCA 72 bp | CCCCTTGGTTTCTGCGACAAGCCGCTTACGTTTGCCTaGGCCGTGTTGCCGGGGACCAGCGACCTTTCACCC | + |
Preference number: 6 (lower is better) Translates to: PLGFCDKPLTFA*AVLPGTSDLSP Trigger: GGGTGAAAGGTCGCTGGTCCCCGGCAACACGGCTCAGGCAAACGTAAGCGGCTTGTCGCAGAAACCAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653681.1 |
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CDS GCA 72 bp | TGGACCCCTTGGTTTCTGCGACAAGCCGCTTACGTTTaGCTGAGCCGTGTTGCCGGGGACCAGCGACCTTTC | + |
Preference number: 6 (lower is better) Translates to: WTPWFLRQAAYV*LSRVAGDQRPF Trigger: GAAAGGTCGCTGGTCCCCGGCAACACGGCTCAGGCAAACGTAAGCGGCTTGTCGCAGAAACCAAGGGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653681.1 |
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CDS CAA 72 bp | GTGGACCCCTTGGTTTCTGCGACAAGCCGCTTACGTTaGCCTGAGCCGTGTTGCCGGGGACCAGCGACCTTT | + |
Preference number: 6 (lower is better) Translates to: VDPLVSATSRLR*PEPCCRGPATF Trigger: AAAGGTCGCTGGTCCCCGGCAACACGGCTCAGGCAAACGTAAGCGGCTTGTCGCAGAAACCAAGGGGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653681.1 |
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CDS CAA 90 bp | AATCTCTCCTTCCCGCCTTCTAGCCTAGCGCGTTTCGTGGACCCCTaGGTTTCTGCGACAAGCCGCTTACGTTTGCCTGAGCCGTGTTGC | + |
Preference number: 6 (lower is better) Translates to: NLSFPPSSLARFVDP*VSATSRLRLPEPCC Trigger: GCAACACGGCTCAGGCAAACGTAAGCGGCTTGTCGCAGAAACCAAGGGGTCCACGAAACGCGCTAGGCTAGAAGGCGGGAAGGAGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS CAA 72 bp | TTCCCGCCTTCTAGCCTAGCGCGTTTCGTGGACCCCTaGGTTTCTGCGACAAGCCGCTTACGTTTGCCTGAG | + |
Preference number: 6 (lower is better) Translates to: FPPSSLARFVDP*VSATSRLRLPE Trigger: CTCAGGCAAACGTAAGCGGCTTGTCGCAGAAACCAAGGGGTCCACGAAACGCGCTAGGCTAGAAGGCGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS GCA 72 bp | TCTGTGTGCACACTCAGCTGTTGCCTGTCTTTAGTCTaGCTACCAGCGCCTTGTGAAGGGAAGACCCACACC | + |
Preference number: 6 (lower is better) Translates to: SVCTLSCCLSLV*LPAPCEGKTHT Trigger: GGTGTGGGTCTTCCCTTCACAAGGCGCTGGTAGGCAGACTAAAGACAGGCAACAGCTGAGTGTGCACACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 72 bp | CTGAGGTTGGAGGATCAGGAGTTGAAGGCTGCAGTGTaGTACATACACACCACTGTACTCCAGCCTGGGCAA | + |
Preference number: 6 (lower is better) Translates to: LRLEDQELKAAV*YIHTTVLQPGQ Trigger: TTGCCCAGGCTGGAGTACAGTGGTGTGTATGTAGCACACTGCAGCCTTCAACTCCTGATCCTCCAACCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548328.5 ENST00000552101.1 ENST00000552826.5 |
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CDS CAA 72 bp | CAGCAACTGTGGAGGCTGAGGTTGGAGGATCAGGAGTaGAAGGCTGCAGTGTGCTACATACACACCACTGTA | + |
Preference number: 6 (lower is better) Translates to: QQLWRLRLEDQE*KAAVCYIHTTV Trigger: TACAGTGGTGTGTATGTAGCACACTGCAGCCTTCAACTCCTGATCCTCCAACCTCAGCCTCCACAGTTGCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000548328.5 ENST00000552101.1 ENST00000552826.5 |
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CDS CAA 90 bp | CAGAGAGAGTTTGTTACAGGAGATGATGTGAGGGTGCTGCTGATTTaGCAGATGAAAGAAGGGGTCCGGAGTCGAGGCATGCATCTCTTA | + |
Preference number: 6 (lower is better) Translates to: QREFVTGDDVRVLLI*QMKEGVRSRGMHLL Trigger: TAAGAGATGCATGCCTCGACTCCGGACCCCTTCTTTCATCTGCAAAATCAGCAGCACCCTCACATCATCTCCTGTAACAAACTCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671020.1 |
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CDS CCA 72 bp | GCTGCAGTGAATCTTTTCTCAGTTCTGGGACTGCATTaGTGGGTCAGGATTCATGTTTACTACTCCTTGGGG | + |
Preference number: 6 (lower is better) Translates to: AAVNLFSVLGLH*WVRIHVYYSLG Trigger: CCCCAAGGAGTAGTAAACATGAATCCTGACCCACCAATGCAGTCCCAGAACTGAGAAAAGATTCACTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS CAA 72 bp | AGCTGCAGTGAATCTTTTCTCAGTTCTGGGACTGCATaGGTGGGTCAGGATTCATGTTTACTACTCCTTGGG | + |
Preference number: 6 (lower is better) Translates to: SCSESFLSSGTA*VGQDSCLLLLG Trigger: CCCAAGGAGTAGTAAACATGAATCCTGACCCACCAATGCAGTCCCAGAACTGAGAAAAGATTCACTGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS CAA 72 bp | AACTCCTTTCCATCGCCTTTGCAGATACACACCAACTaGAAACGACTGCTAGGTGTCACTACTCTCAGAGCA | + |
Preference number: 6 (lower is better) Translates to: NSFPSPLQIHTN*KRLLGVTTLRA Trigger: TGCTCTGAGAGTAGTGACACCTAGCAGTCGTTTCAAGTTGGTGTGTATCTGCAAAGGCGATGGAAAGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662478.1 |
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CDS TCA 72 bp | CTGTTGCCTGTCTTTAGTCTGCCTACCAGCGCCTTGTaGAGGGAAGACCCACACCTAGCTTTATTTATTTAT | + |
Preference number: 6 (lower is better) Translates to: LLPVFSLPTSAL*REDPHLALFIY Trigger: ATAAATAAATAAAGCTAGGTGTGGGTCTTCCCTTCACAAGGCGCTGGTAGGCAGACTAAAGACAGGCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 72 bp | GTCTATTCCAGCTACATTAGATGTTTTATCCGGTGTTaGAGGGTTGACGTTCAGGTCCGTGATATGTCCAAG | + |
Preference number: 6 (lower is better) Translates to: VYSSYIRCFIRC*RVDVQVRDMSK Trigger: CTTGGACATATCACGGACCTGAACGTCAACCCTGCAACACCGGATAAAACATCTAATGTAGCTGGAATAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 72 bp | CCAGAAACCAAGGAAGATTTCAGACTCCGAATCCCATaGTTTTCTACTACCCTGCTTCCTAGAACACTGAGT | + |
Preference number: 6 (lower is better) Translates to: PETKEDFRLRIP*FSTTLLPRTLS Trigger: ACTCAGTGTTCTAGGAAGCAGGGTAGTAGAAAAGCATGGGATTCGGAGTCTGAAATCTTCCTTGGTTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CAA 72 bp | CCAGCTACATTAGATGTTTTATCCGGTGTTGCAGGGTaGACGTTCAGGTCCGTGATATGTCCAAGATCTGTA | + |
Preference number: 6 (lower is better) Translates to: PATLDVLSGVAG*TFRSVICPRSV Trigger: TACAGATCTTGGACATATCACGGACCTGAACGTCAACCCTGCAACACCGGATAAAACATCTAATGTAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CAA 90 bp | ATGCAGTTGTGGGAGTCTAGTAGTGATGGATCACATGGCAAGTTCTaGGACCTTATCATCAAAACAGTCTGGGAATTTCTGAGCTCTCAC | + |
Preference number: 6 (lower is better) Translates to: MQLWESSSDGSHGKF*DLIIKTVWEFLSSH Trigger: GTGAGAGCTCAGAAATTCCCAGACTGTTTTGATGATAAGGTCCAAGAACTTGCCATGTGATCCATCACTACTAGACTCCCACAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000547786.1 ENST00000653681.1 ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000667328.1 ENST00000671020.1 |
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CDS CAA 90 bp | ATATGTAAGAACTCCTTTCCATCGCCTTTGCAGATACACACCAACTaGAAACGACTGCTAGGTGTCACTACTCTCAGAGCACATAGGCTA | + |
Preference number: 6 (lower is better) Translates to: ICKNSFPSPLQIHTN*KRLLGVTTLRAHRL Trigger: TAGCCTATGTGCTCTGAGAGTAGTGACACCTAGCAGTCGTTTCAAGTTGGTGTGTATCTGCAAAGGCGATGGAAAGGAGTTCTTACATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662478.1 |
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CDS TCA 72 bp | GGGACAGTAATAACTACACGACATACTGCATGTAATTaGCACAGCATGCAAAGTGGATTGTTTGCCACGTGG | + |
Preference number: 6 (lower is better) Translates to: GTVITTRHTACN*HSMQSGLFATW Trigger: CCACGTGGCAAACAATCCACTTTGCATGCTGTGTCAATTACATGCAGTATGTCGTGTAGTTATTACTGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 72 bp | CCGACACTCGTATTTCGTTCAATATTTAGTTCTGTGTaGACACTCAGCTGTTGCCTGTCTTTAGTCTGCCTA | + |
Preference number: 6 (lower is better) Translates to: PTLVFRSIFSSV*TLSCCLSLVCL Trigger: TAGGCAGACTAAAGACAGGCAACAGCTGAGTGTGCACACAGAACTAAATATTGAACGAAATACGAGTGTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CCA 72 bp | GTGGAAATTGGTTGGAGTCTCAGTCTCTGTTTTGAGTaGGAGGGAATCCGGAGCTCTAATGTATTACAATAC | + |
Preference number: 6 (lower is better) Translates to: VEIGWSLSLCFE*EGIRSSNVLQY Trigger: GTATTGTAATACATTAGAGCTCCGGATTCCCTCCCACTCAAAACAGAGACTGAGACTCCAACCAATTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CAA 90 bp | AGGAGAACTGTGGCAGGACAGAGTCTGGCTAGCCATCAATGCACATaGTTTATGTCTTCAAGATGGGTTATTTCAGAACTTAGCCAGTTA | + |
Preference number: 6 (lower is better) Translates to: RRTVAGQSLASHQCT*FMSSRWVISELSQL Trigger: TAACTGGCTAAGTTCTGAAATAACCCATCTTGAAGACATAAACAATGTGCATTGATGGCTAGCCAGACTCTGTCCTGCCACAGTTCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS CAA 90 bp | CTACTGTTTAGCTGCAGTGAATCTTTTCTCAGTTCTGGGACTGCATaGGTGGGTCAGGATTCATGTTTACTACTCCTTGGGGTAAGAAAT | + |
Preference number: 6 (lower is better) Translates to: LLFSCSESFLSSGTA*VGQDSCLLLLGVRN Trigger: ATTTCTTACCCCAAGGAGTAGTAAACATGAATCCTGACCCACCAATGCAGTCCCAGAACTGAGAAAAGATTCACTGCAGCTAAACAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653681.1 |
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CDS TCA 72 bp | TACAGCTTAGAATACATTGCCACAGTCTCTCTCGTTTaGCTCCCAATAATGGTGGAAATTGGTTGGAGTCTC | + |
Preference number: 6 (lower is better) Translates to: YSLEYIATVSLV*LPIMVEIGWSL Trigger: GAGACTCCAACCAATTTCCACCATTATTGGGAGTCAAACGAGAGAGACTGTGGCAATGTATTCTAAGCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS GCA 72 bp | AGAACTGTGGCAGGACAGAGTCTGGCTAGCCATCAATaGACATTGTTTATGTCTTCAAGATGGGTTATTTCA | + |
Preference number: 6 (lower is better) Translates to: RTVAGQSLASHQ*TLFMSSRWVIS Trigger: TGAAATAACCCATCTTGAAGACATAAACAATGTGCATTGATGGCTAGCCAGACTCTGTCCTGCCACAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS CAA 72 bp | TGGGAGTCTAGTAGTGATGGATCACATGGCAAGTTCTaGGACCTTATCATCAAAACAGTCTGGGAATTTCTG | + |
Preference number: 6 (lower is better) Translates to: WESSSDGSHGKF*DLIIKTVWEFL Trigger: CAGAAATTCCCAGACTGTTTTGATGATAAGGTCCAAGAACTTGCCATGTGATCCATCACTACTAGACTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000547786.1 ENST00000653681.1 ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000667328.1 ENST00000671020.1 |
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CDS CAA 72 bp | GTGGCAGGACAGAGTCTGGCTAGCCATCAATGCACATaGTTTATGTCTTCAAGATGGGTTATTTCAGAACTT | + |
Preference number: 6 (lower is better) Translates to: VAGQSLASHQCT*FMSSRWVISEL Trigger: AAGTTCTGAAATAACCCATCTTGAAGACATAAACAATGTGCATTGATGGCTAGCCAGACTCTGTCCTGCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547786.1 ENST00000653681.1 |
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CDS CAA 72 bp | GTACAGCTTAGAATACATTGCCACAGTCTCTCTCGTTaGACTCCCAATAATGGTGGAAATTGGTTGGAGTCT | + |
Preference number: 6 (lower is better) Translates to: VQLRIHCHSLSR*TPNNGGNWLES Trigger: AGACTCCAACCAATTTCCACCATTATTGGGAGTCAAACGAGAGAGACTGTGGCAATGTATTCTAAGCTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CAA 90 bp | AATCTGTTTAGCTGCAGTGAATCTTTTCTCAGTTCTGGGACTGCATaGGTGGGTCAGGATTCATGTTTACTACTCCTTGGGGTAAGAAAT | + |
Preference number: 6 (lower is better) Translates to: NLFSCSESFLSSGTA*VGQDSCLLLLGVRN Trigger: ATTTCTTACCCCAAGGAGTAGTAAACATGAATCCTGACCCACCAATGCAGTCCCAGAACTGAGAAAAGATTCACTGCAGCTAAACAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547786.1 |
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CDS CAA 90 bp | TATACCTTTGTACAGCTTAGAATACATTGCCACAGTCTCTCTCGTTaGACTCCCAATAATGGTGGAAATTGGTTGGAGTCTCAGTCTCTG | + |
Preference number: 6 (lower is better) Translates to: YTFVQLRIHCHSLSR*TPNNGGNWLESQSL Trigger: CAGAGACTGAGACTCCAACCAATTTCCACCATTATTGGGAGTCAAACGAGAGAGACTGTGGCAATGTATTCTAAGCTGTACAAAGGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CAA 90 bp | TCCTTCTTCAGAATATGCATATGTAAGAACTCCTTTCCATCGCCTTaGCAGATACACACCAACTTGAAACGACTGCTAGGTGTCACTACT | + |
Preference number: 6 (lower is better) Translates to: SFFRICICKNSFPSP*QIHTNLKRLLGVTT Trigger: AGTAGTGACACCTAGCAGTCGTTTCAAGTTGGTGTGTATCTGCAAAGGCGATGGAAAGGAGTTCTTACATATGCATATTCTGAAGAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662478.1 |
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CDS CAA 90 bp | TCCTTCTTCAGAATATGCATATGTAAGAACTCCTTTCCATCGCCTTaGCAGATACACACCAACTTGACTTACACAAGTAAACTGTTGTCA | + |
Preference number: 6 (lower is better) Translates to: SFFRICICKNSFPSP*QIHTNLTYTSKLLS Trigger: TGACAACAGTTTACTTGTGTAAGTCAAGTTGGTGTGTATCTGCAAAGGCGATGGAAAGGAGTTCTTACATATGCATATTCTGAAGAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663208.1 |
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CDS GCA 72 bp | AGTTTTTCAGTAAGGGTAACATCCTTCTTCAGAATATaGATATGTAAGAACTCCTTTCCATCGCCTTTGCAG | + |
Preference number: 6 (lower is better) Translates to: SFSVRVTSFFRI*ICKNSFPSPLQ Trigger: CTGCAAAGGCGATGGAAAGGAGTTCTTACATATGCATATTCTGAAGAAGGATGTTACCCTTACTGAAAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000548328.5 ENST00000552101.1 ENST00000552826.5 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CAA 90 bp | GCAGTTAGGAGGATGATGAATAAAACTAGATGCCATGTTGTCAGTTaGAAAGCTACATCTATAGCCTACTATAGGAGAATAAGGAAATGG | + |
Preference number: 6 (lower is better) Translates to: AVRRMMNKTRCHVVS*KATSIAYYRRIRKW Trigger: CCATTTCCTTATTCTCCTATAGTAGGCTATAGATGTAGCTTTCAAACTGACAACATGGCATCTAGTTTTATTCATCATCCTCCTAACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667328.1 |
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CDS TCA 72 bp | GAAACTAAACGTTATTCTCTTCCTCATTCAGTGGACTaGTATCTCTCATTGCTTAAAAAGCACCAGAAATCC | + |
Preference number: 6 (lower is better) Translates to: ETKRYSLPHSVD*YLSLLKKHQKS Trigger: GGATTTCTGGTGCTTTTTAAGCAATGAGAGATATCAGTCCACTGAATGAGGAAGAGAATAACGTTTAGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000667328.1 ENST00000671020.1 |
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CDS GCA 72 bp | GAATATGTTTATACCTTTGTACAGCTTAGAATACATTaGCACAGTCTCTCTCGTTTGACTCCCAATAATGGT | + |
Preference number: 6 (lower is better) Translates to: EYVYTFVQLRIH*HSLSRLTPNNG Trigger: ACCATTATTGGGAGTCAAACGAGAGAGACTGTGGCAATGTATTCTAAGCTGTACAAAGGTATAAACATATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS TCA 72 bp | CAAGATCTGTATAATCATAAGCCGTGCACATGGCAATaGATTTTATTCCGACACTCGTATTTCGTTCAATAT | + |
Preference number: 6 (lower is better) Translates to: QDLYNHKPCTWQ*ILFRHSYFVQY Trigger: ATATTGAACGAAATACGAGTGTCGGAATAAAATTCATTGCCATGTGCACGGCTTATGATTATACAGATCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656804.1 ENST00000662478.1 ENST00000663208.1 ENST00000671020.1 |
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CDS CAA 72 bp | AGGATGATGAATAAAACTAGATGCCATGTTGTCAGTTaGAAAGCTACATCTATAGCCTACTATAGGAGAATA | + |
Preference number: 6 (lower is better) Translates to: RMMNKTRCHVVS*KATSIAYYRRI Trigger: TATTCTCCTATAGTAGGCTATAGATGTAGCTTTCAAACTGACAACATGGCATCTAGTTTTATTCATCATCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667328.1 |